Pregenerated sensors for PSMD11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017428Ensembl transcript IDs: ENSMUST00000017572.14, ENSMUST00000125591.3, ENSMUST00000129500.8, ENSMUST00000148895.9, ENSMUST00000172615.8, ENSMUST00000172773.8, ENSMUST00000172847.8, ENSMUST00000173060.2, ENSMUST00000173186.8, ENSMUST00000173797.8, ENSMUST00000173938.8, ENSMUST00000174743.8
Found 280 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGCGCCCAGCAGGTGGGTGAGGATCCCCAGTGGTTGGCAGGGTaGCTGGCTTTGCGGCCCTCTCCCAGGAGGCAGAGAGCACAGCTT | + |
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Preference number: 1 (lower is better) Translates to: GGAQQVGEDPQWLAG*LALRPSPRRQRAQL Trigger: AAGCTGTGCTCTCTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCTGCCAACCACTGGGGATCCTCACCCACCTGCTGGGCGCCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 90 bp | AAGAGGAGGAGAGGTGGCGCCCAGCAGGTGGGTGAGGATCCCCAGTaGTTGGCAGGGTGCCTGGCTTTGCGGCCCTCTCCCAGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: KRRRGGAQQVGEDPQ*LAGCLALRPSPRRQ Trigger: CTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCTGCCAACCACTGGGGATCCTCACCCACCTGCTGGGCGCCACCTCTCCTCCTCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 90 bp | GCGCCCAGCAGGTGGGTGAGGATCCCCAGTGGTTGGCAGGGTGCCTaGCTTTGCGGCCCTCTCCCAGGAGGCAGAGAGCACAGCTTTAGG | + |
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Preference number: 1 (lower is better) Translates to: APSRWVRIPSGWQGA*LCGPLPGGREHSFR Trigger: CCTAAAGCTGTGCTCTCTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCTGCCAACCACTGGGGATCCTCACCCACCTGCTGGGCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR TCA 90 bp | ACACCCAATTCTGAAGAGGAGGAGAGGTGGCGCCCAGCAGGTGGGTaGGGATCCCCAGTGGTTGGCAGGGTGCCTGGCTTTGCGGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: TPNSEEEERWRPAGG*GSPVVGRVPGFAAL Trigger: GAGGGCCGCAAAGCCAGGCACCCTGCCAACCACTGGGGATCCTCACCCACCTGCTGGGCGCCACCTCTCCTCCTCTTCAGAATTGGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 90 bp | GGGAGGGAGGGAGGGAGGGAGGGAGGGGACAGGGACAAAGCACAGTaGGCACAGCAAAGGTGCAGGCGCTTACCTGCCCACAAGGCATCA | + |
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Preference number: 1 (lower is better) Translates to: GREGGREGGDRDKAQ*AQQRCRRLPAHKAS Trigger: TGATGCCTTGTGGGCAGGTAAGCGCCTGCACCTTTGCTGTGCCCACTGTGCTTTGTCCCTGTCCCCTCCCTCCCTCCCTCCCTCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 90 bp | GACCCTTCAGCTAGTTTGCTGGAGCCAATGTCAGAGAGGGAAGGGTaGACAGGCCAGATGGCAGGGGAAAACACCAAACGCCTCATTTCA | + |
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Preference number: 1 (lower is better) Translates to: DPSASLLEPMSEREG*TGQMAGENTKRLIS Trigger: TGAAATGAGGCGTTTGGTGTTTTCCCCTGCCATCTGGCCTGTCCACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 90 bp | CCCGAAGCAGCTGAGAACCCAAATGCAATGCTTCCTGGTACCTCTTaGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGC | + |
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Preference number: 1 (lower is better) Translates to: PEAAENPNAMLPGTS*YQNTKTPALPPMLG Trigger: GCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTACCAGGAAGCATTGCATTTGGGTTCTCAGCTGCTTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173060.2 |
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| 3UTR CCA 90 bp | GCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTAAACATAGCTCGACCTCCTGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: ALPPMLGVRKFFSLI*PIRCTLNIARPPAL Trigger: CAGGGCAGGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173186.8 |
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| 3UTR CCA 90 bp | ACGTCGGCCTTGGAGAGTTTGATGAGGCTAGATATGTGTTCAATCTaGACTCGGGAAAAAGGCTCGATGACCCGGATCAGATTCTGTTCC | + |
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Preference number: 1 (lower is better) Translates to: TSALESLMRLDMCSI*TREKGSMTRIRFCS Trigger: GGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAACACATATCTAGCCTCATCAAACTCTCCAAGGCCGACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
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| 3UTR TCA 90 bp | GTCAGGGCCTTTTCAAAATCTGCCAGTGATCTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCTTCTGTCTGCCTCCCTGCATACCGA | + |
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Preference number: 1 (lower is better) Translates to: VRAFSKSASDLFLLA*ATHFNASVCLPAYR Trigger: TCGGTATGCAGGGAGGCAGACAGAAGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAAAAGGCCCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
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| 3UTR CCA 90 bp | AGCGCCACCCTGTCTGTCACCCTTTCAAGAGGCAGAGAAAGACACTaGGAAGGAGACATGAGGGTGCTTCAAATGCAACAAGGAAAATTA | + |
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Preference number: 1 (lower is better) Translates to: SATLSVTLSRGRERH*EGDMRVLQMQQGKL Trigger: TAATTTTCCTTGTTGCATTTGAAGCACCCTCATGTCTCCTTCCCAGTGTCTTTCTCTGCCTCTTGAAAGGGTGACAGACAGGGTGGCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR TCA 90 bp | GGGGCTATCAATGGAGTCGTAGCCTTCGAATGCCTCATAGAAGTATaGGTATGCAGTTTTCCAGTCCTTCTCCTCTGCTGCATGAATAAT | + |
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Preference number: 1 (lower is better) Translates to: GAINGVVAFECLIEV*VCSFPVLLLCCMNN Trigger: ATTATTCATGCAGCAGAGGAGAAGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACTCCATTGATAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
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| 3UTR CCA 90 bp | GCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAAAGACAA | + |
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Preference number: 1 (lower is better) Translates to: ALPPMLGVRKFFSLI*PIRCTLNIARPQRQ Trigger: TTGTCTTTGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
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| 3UTR CCA 90 bp | AATTATTTTATTGGAACTCATCTGAACATCAGATATACCTGGTGTTaGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: NYFIGTHLNIRYTWC*SARTVCTFDNDGAK Trigger: TTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAATAATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGGGAGGGGACAGGGACAAAGCACAGTGGGCACAGCAAAGGTGCAGGCGCTCCCGTGTGGCCATGGTaGACACTAGCTCCTGGACTT | + |
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Preference number: 2 (lower is better) Translates to: GREGTGTKHSGHSKGAGAPVWPW*TLAPGL Trigger: AAGTCCAGGAGCTAGTGTCCACCATGGCCACACGGG...AGCGCCTGCACCTTTGCTGTGCCCACTGTGCTTTGTCCCTGTCCCCTCCCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CAA 90 bp | CCGAGCATGTACTGCGGCGGCAGCACAGCGGACCCTTCAGCTAGTTaGCTGGAGCCAATGTCAGAGAGGGAAGGGTGGACAGGCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: PSMYCGGSTADPSAS*LEPMSEREGWTGQM Trigger: CATCTGGCCTGTCCACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGTGCTGCCGCCGCAGTACATGCTCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR-3UTR TCA 90 bp | CAATGCTTCTGTCTGCCTCCCTGCATACCGAAGTGCAAGCTTTCCGCTCACCAATGCATGAATAATGCCTaGCTGCATGTCCAGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: QCFCLPPCIPKCKLSAHQCMNNA*LHVQGG Trigger: GCCACCCTGGACATGCAGTCAGGCATTATTCATGCA...TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAAGCATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
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| 3UTR CAA 90 bp | TCGATGACCCGGATCAGATTCTGTTCCAGTAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATGATTGGGTCATCCCGGAGCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SMTRIRFCSSKLSYS*AKCVLMIGSSRSSA Trigger: GGCAGAGCTCCGGGATGACCCAATCATCAGCACACATTTGGCCAAGCTGTACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
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| 3UTR CAA 90 bp | AGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SLASNAWRKKVLFSD*AHSMHSKHSSTSCP Trigger: AGGGCAGGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173186.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAATTTCCCCATTCCCGTGTTGGCCAGTACGGATTACATGAGAACTGGCCGCATACAGATGCACCAATaGGGGTTAAAAACTTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: SNFPIPVLASTDYMRTGRIQMHQ*GLKTFR Trigger: TCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTAT...GCGGCCAGTTCTCATGTAATCCGTACTGGCCAACACGGGAATGGGGAAATTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATGCAAACACCCAATTCTaGAGAGGAGGAGAGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: LNIRYTWCWSARTVCTFDANTQF*RGGEVA Trigger: CGCCACCTCTCCTCCTCTTCAGAATTGGGTGTTTGC...ATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR-3UTR GCA 90 bp | AGATGGCATTTGCTGTGGTTCGAGCAGAGGTTAAGGCAGCTCGGGCTTTCGGCAGAGCATGGTAAGTTTTaGTTTCTAAAAGCTGTACTT | + |
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Preference number: 2 (lower is better) Translates to: RWHLLWFEQRLRQLGLSAEHGKF*FLKAVL Trigger: AAGTACAGCTTTTAGAAAGCAAAACTTACCATGCTC...TGCCGAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172773.8 ENSMUST00000173060.2 ENSMUST00000174743.8 |
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| 3UTR CAA 90 bp | AGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: SLASNAWRKKVLFSD*AHSMHSKHSSTSKT Trigger: TGTCTTTGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
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| 3UTR-3UTR TCA 90 bp | GTTCTTTTCTCTGATTTGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAGATTCCAGGGACCACTaGCAATCTCCACTTACAAAG | + |
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Preference number: 2 (lower is better) Translates to: VLFSDLAHSMHSKHSSTSDSRDH*QSPLTK Trigger: CTTTGTAAGTGGAGATTGTCAGTGGTCCCTGGAATC...TGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
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| 3UTR-3UTR TCA 90 bp | GTACCTCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGGAAAGTTCTTTTCTCTaGTTTGGCCCATTCGATGCA | + |
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Preference number: 2 (lower is better) Translates to: VPLGIKIQRHQPCLQCLAESSFL*FGPFDA Trigger: TGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTC...CGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
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| 3UTR-3UTR TCA 90 bp | GGTACCTCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGAAAGTTCTTTTCTCTaGTTTGGCCCATTCGATGCA | + |
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Preference number: 2 (lower is better) Translates to: GTSWYQNTKTPALPPMLGESSFL*FGPFDA Trigger: TGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTC...GCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGGCCATTTGGCCCATTCGATaGACTCTAAACATAGCTCGA | + |
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Preference number: 2 (lower is better) Translates to: TSLASNAWRKKVLFSDLAIWPIR*TLNIAR Trigger: TCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAAT...GGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
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| 3UTR-3UTR TCA 90 bp | AATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTGATTCCAGGGACCACTaGCAATCTCCACTTACAAAG | + |
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Preference number: 2 (lower is better) Translates to: NTKTPALPPMLGVRKFFSDSRDH*QSPLTK Trigger: CTTTGTAAGTGGAGATTGTCAGTGGTCCCTGGAATC...AGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
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| 3UTR CAA 90 bp | AGAATCATCTGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGTTCAATCTGGACTCGGGAAAAAGGC | + |
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Preference number: 2 (lower is better) Translates to: RIICDNFLSTSALES*MRLDMCSIWTREKG Trigger: GCCTTTTTCCCGAGTCCAGATTGAACACATATCTAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGATGATTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
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| 3UTR-3UTR TCA 90 bp | TGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGGAAAGTTCTTTTCTCTaGTTTGGCCCATTCGATGCA | + |
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Preference number: 2 (lower is better) Translates to: WYQNTKTPALPPMLGVRKESSFL*FGPFDA Trigger: TGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTC...CTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATGAGGGAAGCAGCAGATaGAGTTTAGACAGCTCAACT | + |
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Preference number: 2 (lower is better) Translates to: LNIRYTWCWSARTVCTFDEGSSR*SLDSST Trigger: AGTTGAGCTGTCTAAACTCCATCTGCTGCTTCCCTC...ATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CAA 90 bp | ACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTaGATAATGATGGTGCCAAAACCAAAACAGGGACTGGACATGATG | + |
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Preference number: 2 (lower is better) Translates to: TSDIPGVGQQEPFVH*IMMVPKPKQGLDMM Trigger: CATCATGTCCAGTCCCTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
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| 3UTR CAA 90 bp | TTCTTGTCAAGAATCATCTGTGATAATTTTCTTTCCACGTCGGCCTaGGAGAGTTTGATGAGGCTAGATATGTGTTCAATCTGGACTCGG | + |
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Preference number: 2 (lower is better) Translates to: FLSRIICDNFLSTSA*ESLMRLDMCSIWTR Trigger: CCGAGTCCAGATTGAACACATATCTAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGATGATTCTTGACAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: KDTSLASNAWRKKVLFSDFFSLI*PIRCTL Trigger: TAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAA...ATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCTGAGAACCCAAATGCAATGCTTCCTGGTACCTCTTGGTATCAAAATACAACTTGCCTCCAATGCTTaGCGTAAGAAAGTTCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: QLRTQMQCFLVPLGIKIQLASNA*RKKVLF Trigger: GAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAG...TTGTATTTTGATACCAAGAGGTACCAGGAAGCATTGCATTTGGGTTCTCAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173060.2 |
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| 3UTR CAA 90 bp | TTGTTTGTTTTGGTTCAGTACAAACAGAATAAAAAGTCGTTGCTTTaGATGGTCAGCAAACACCCAATTCTGAAGAGGAGGAGAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LFVLVQYKQNKKSLL*MVSKHPILKRRRGG Trigger: GCCACCTCTCCTCCTCTTCAGAATTGGGTGTTTGCTGACCATCAAAAGCAACGACTTTTTATTCTGTTTGTACTGAACCAAAACAAACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR-3UTR TCA 90 bp | GATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACAGAAAGAAAATACAGATGCACCAATaGGGGTTAAAAACTTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: DAPMRVKNFPSEKWNRKKIQMHQ*GLKTFR Trigger: TCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTAT...TTTCTTTCTGTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCACTACTTTACTCATGTTCTGAATAGTTTCCAGAGCAGCTTCATAAGTTTTTATTTTGGACAACTGTaGAGAAAGAAGTGGCCACAG | + |
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Preference number: 2 (lower is better) Translates to: VHYFTHVLNSFQSSFISFYFGQL*RKKWPQ Trigger: CTGTGGCCACTTCTTTCTCCACAGTTGTCCAAAATA...AAAACTTATGAAGCTGCTCTGGAAACTATTCAGAACATGAGTAAAGTAGTGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
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| 3UTR GCA 72 bp | CAGCAGGTGGGTGAGGATCCCCAGTGGTTGGCAGGGTaGCTGGCTTTGCGGCCCTCTCCCAGGAGGCAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QQVGEDPQWLAG*LALRPSPRRQR Trigger: TCTCTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCTGCCAACCACTGGGGATCCTCACCCACCTGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 72 bp | AGGTGGGTGAGGATCCCCAGTGGTTGGCAGGGTGCCTaGCTTTGCGGCCCTCTCCCAGGAGGCAGAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: RWVRIPSGWQGA*LCGPLPGGREH Trigger: GTGCTCTCTGCCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCTGCCAACCACTGGGGATCCTCACCCACCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 72 bp | GCGGCGGCAGCACAGCGGACCCTTCAGCTAGTTTGCTaGAGCCAATGTCAGAGAGGGAAGGGTGGACAGGCC | + |
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Preference number: 3 (lower is better) Translates to: AAAAQRTLQLVC*SQCQRGKGGQA Trigger: GGCCTGTCCACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGTGCTGCCGCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR-3UTR CAA 90 bp | GCAGGAAAGAGTGGGAGAGGGAAGCAGCAGATGGAGTTTAGACAGCTCAACTCCGCAGGGTGCCTGGCTTaGCGGCCCTCTCCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: AGKSGRGKQQMEFRQLNSAGCLA*RPSPRR Trigger: CCTCCTGGGAGAGGGCCGCAAAGCCAGGCACCCTGC...GGAGTTGAGCTGTCTAAACTCCATCTGCTGCTTCCCTCTCCCACTCTTTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR GCA 72 bp | ACTGCGGCGGCAGCACAGCGGACCCTTCAGCTAGTTTaGTGGAGCCAATGTCAGAGAGGGAAGGGTGGACAG | + |
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Preference number: 3 (lower is better) Translates to: TAAAAQRTLQLV*WSQCQRGKGGQ Trigger: CTGTCCACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGTGCTGCCGCCGCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR GCA 72 bp | GGGGACAGGGACAAAGCACAGTGGGCACAGCAAAGGTaGAGGCGCTTACCTGCCCACAAGGCATCAAAGCCT | + |
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Preference number: 3 (lower is better) Translates to: GDRDKAQWAQQR*RRLPAHKASKP Trigger: AGGCTTTGATGCCTTGTGGGCAGGTAAGCGCCTGCACCTTTGCTGTGCCCACTGTGCTTTGTCCCTGTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| 3UTR CCA 72 bp | GAGGGCTGTGGGCCCTCACTGCTCCCCGTGTGGCCATaGTGGACACTAGCTCCTGGACTTCTTTCCGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EGCGPSLLPVWP*WTLAPGLLSVF Trigger: AAAAACGGAAAGAAGTCCAGGAGCTAGTGTCCACCATGGCCACACGGGGAGCAGTGAGGGCCCACAGCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| 3UTR TCA 72 bp | CAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTaGGGACCAGACGGTGTTCAGTGTCGACAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QEKTEQCQSGKP*GPDGVQCRQAE Trigger: CTCTGCCTGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| 3UTR CCA 72 bp | TGGCCCCAGGGCCAGCACTCACCTATGTCAGCTTCTTaGCTTTGCTGTAGAGGGAGTCCACTACTTTACTCA | + |
|
Preference number: 3 (lower is better) Translates to: WPQGQHSPMSAS*LCCRGSPLLYS Trigger: TGAGTAAAGTAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACATAGGTGAGTGCTGGCCCTGGGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| 3UTR CCA 72 bp | CATTCCCGTGTTGGCCAGTACGGATTACATGAGAACTaGCCGCCTATCGCTGGATACAGATGCACCAATGAG | + |
|
Preference number: 3 (lower is better) Translates to: HSRVGQYGLHEN*PPIAGYRCTNE Trigger: CTCATTGGTGCATCTGTATCCAGCGATAGGCGGCCAGTTCTCATGTAATCCGTACTGGCCAACACGGGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| 3UTR CCA 72 bp | GTTATCGTACAGCTTGGCCAAATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGCCCTGTAGTCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: VIVQLGQMCADD*VIPELCPVVCQ Trigger: CTGACAGACTACAGGGCAGAGCTCCGGGATGACCCAATCATCAGCACACATTTGGCCAAGCTGTACGATAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172847.8 ENSMUST00000174743.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCCATTCGATGCACTCTAAACATAGCTCGACCTCCTGCCCTGTGGCTGCTTCCGAGTCCTCCAAGCTCTaGTCTTTAATTCTCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHSMHSKHSSTSCPVAASESSKL*SLILFL Trigger: CAGAAAGAGAATTAAAGACAAGAGCTTGGAGGACTC...GGAAGCAGCCACAGGGCAGGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173186.8 |
||
| 3UTR GCA 72 bp | TTTCAATGCTTCTGTCTGCCTCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAAAGCCTGGACATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: FQCFCLPPCIPK*KLSAHQSLDIF Trigger: GAAGATGTCCAGGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAAGCATTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| 3UTR GCA 72 bp | CAAATGTGTGCTGATGATTGGGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGCCTTTTCAAAATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: QMCADDWVIPEL*PVVCQGLFKIC Trigger: GCAGATTTTGAAAAGGCCCTGACAGACTACAGGGCAGAGCTCCGGGATGACCCAATCATCAGCACACATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172847.8 ENSMUST00000174743.8 |
||
| 3UTR CCA 72 bp | GCATACCGAAGTGCAAGCTTTCCGCTCACCAAAGCCTaGACATCTTCTGGGGTGTTGAGCATGATTTTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AYRSASFPLTKA*TSSGVLSMILH Trigger: GTGCAAAATCATGCTCAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| 3UTR-3UTR CAA 90 bp | TATGTGTTCAATCTGGACTCGGGAAAAAGGCTCGATGACCCGGATCAGATTCTGCTTTCCACGTCGGCCTaGGAGAGTTTGATGAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: YVFNLDSGKRLDDPDQILLSTSA*ESLMRL Trigger: TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAG...CAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAACACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCCTGGACATCTTCTGGGGTGTTGAGCATGATTTTGCACAGCAACATGTACAGAGATGTGATGGCCTaGGGGCTATCAATGGAGTCG | + |
|
Preference number: 3 (lower is better) Translates to: KAWTSSGVLSMILHSNMYRDVMA*GLSMES Trigger: CGACTCCATTGATAGCCCCAAGGCCATCACATCTCT...GTACATGTTGCTGTGCAAAATCATGCTCAACACCCCAGAAGATGTCCAGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| 3UTR CCA 72 bp | TTGGAGAGTTTGATGAGGCTAGATATGTGTTCAATCTaGACTCGGGAAAAAGGCTCGATGACCCGGATCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LESLMRLDMCSI*TREKGSMTRIR Trigger: TCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAACACATATCTAGCCTCATCAAACTCTCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCCACTACTTTACTCATGTTCTTCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: MSASWLCCRGSPLLYSCSSALES*MRLDMC Trigger: ACACATATCTAGCCTCATCAAACTCTCCAAGGCCGA...AGAACATGAGTAAAGTAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| 3UTR TCA 72 bp | CCTGTAGTCTGTCAGGGCCTTTTCAAAATCTGCCAGTaGTCTGTTCTTGCTAGCTTGAGCCACACATTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: PVVCQGLFKICQ*SVLASLSHTFQ Trigger: TTGAAATGTGTGGCTCAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAAAAGGCCCTGACAGACTACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| 3UTR-3UTR CAA 90 bp | AAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: KDTSLASNAWRKKVLFSDVLFSD*AHSMHS Trigger: AGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAAC...ATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| 3UTR TCA 72 bp | TTTTCAAAATCTGCCAGTGATCTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCTTCTGTCTGCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSKSASDLFLLA*ATHFNASVCLP Trigger: AGGGAGGCAGACAGAAGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| 3UTR TCA 72 bp | ATATGTGTTCAATCTGGACTCGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTTCCAGTAAGTTATCGT | + |
|
Preference number: 3 (lower is better) Translates to: ICVQSGLGKKAR*PGSDSVPVSYR Trigger: ACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAACACATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| 3UTR CCA 72 bp | ATTGGAACTCATCTGAACATCAGATATACCTGGTGTTaGTCAGCAAGAACCGTTTGTACATTTGATAATGAT | + |
|
Preference number: 3 (lower is better) Translates to: IGTHLNIRYTWC*SARTVCTFDND Trigger: ATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| 3UTR CCA 72 bp | TATTTTATTGGAACTCATCTGAACATCAGATATACCTaGTGTTGGTCAGCAAGAACCGTTTGTACATTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YFIGTHLNIRYT*CWSARTVCTFD Trigger: ATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR TCA 90 bp | GTGGGCACAGCAAAGGTGCAGGCGCTTACCTGCCCACAAGGCATCAAAGCCTGCCCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VGTAKVQALTCPQGIKACPPGRC*VETGLS Trigger: AGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGG...GCAGGCTTTGATGCCTTGTGGGCAGGTAAGCGCCTGCACCTTTGCTGTGCCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PKGSLSRHTHSPKDRYRSVIPEL*PVVCQG Trigger: GCCCTGACAGACTACAGGGCAGAGCTCCGGGATGAC...GGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FPQGFTLPPHTLSKGPLQSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...CTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| 3UTR CAA 72 bp | TACTGCGGCGGCAGCACAGCGGACCCTTCAGCTAGTTaGCTGGAGCCAATGTCAGAGAGGGAAGGGTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: YCGGSTADPSAS*LEPMSEREGWT Trigger: TGTCCACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGTGCTGCCGCCGCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCCAGGGCCTGCCTCCCTaGATACCGAAGTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKGSLSRHTHSPKDRYRSQGLPP*IPKCKL Trigger: AAGCTTGCACTTCGGTATGCAGGGAGGCAGGCCCTG...GGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148895.9 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CKRRQSSVNRESREDQTVVIPEL*PVVCQG Trigger: GCCCTGACAGACTACAGGGCAGAGCTCCGGGATGAC...CACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | ACTGCTCCCCGTGTGGCCATGGTGGACACTAGCTCCTGGACTTCTTTCCGTTTTAGAGACTGGGCTCTCTaGAACTCCACCACCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TAPRVAMVDTSSWTSFRFRDWAL*NSTTAA Trigger: CGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCT...AAAACGGAAAGAAGTCCAGGAGCTAGTGTCCACCATGGCCACACGGGGAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACAAGAGACTGGGCTCTCTaGAACTCCACCACCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RAVSIGKAVRTRRCSVSTRDWAL*NSTTAA Trigger: CGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCT...TGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACCAGACGGTGTTCAGTGTCGACAGGCAGAGGACAGTGCTGCCTGACCCTATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDQTVFSVDRQRTVLPDPMCADD*VIPELC Trigger: GCAGAGCTCCGGGATGACCCAATCATCAGCACACAT...AGGGTCAGGCAGCACTGTCCTCTGCCTGTCGACACTGAACACCGTCTGGTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | GCACAGCGGACCCTTCAGCTAGTTTGCTGGAGCCAATGTCAGAGAGGGAAGGGTGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQRTLQLVCWSQCQRGKGGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...ACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR TCA 90 bp | GAGGACCAGACGGTGTTCAGTGTCGACAGGCAGAGGACAGTGCTGCCTGACCCTGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EDQTVFSVDRQRTVLPDPGKKAR*PGSDSV Trigger: AACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCC...AGGGTCAGGCAGCACTGTCCTCTGCCTGTCGACACTGAACACCGTCTGGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | TCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SPRVHSPATHTLQRTATDRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...ATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCACCGCTCACCAAAGCCTaGACATCTTCTGGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PRVHSPATHTLQRTATDPPLTKA*TSSGVL Trigger: CAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGG...TGGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QKEKNLLAFPQGFTLPPHSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...GTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGGCCCAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PALPPMLGVRKFFSLIWPSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...GGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGTCTGCCTCCCTGCATACCGAAGTGCAAGCTTTCCGCTCACCAAAGCCTGCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FCLPPCIPKCKLSAHQSLRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...CAGGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACACCGCTCACCAAAGCCTaGACATCTTCTGGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAVSIGKAVRTRRCSVSTPLTKA*TSSGVL Trigger: CAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGG...TGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCAACTCTGCAAGAGATGCATGAATAATGCCTaGCTGCATGTCCAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPHTLSKGPLQIQLCKRCMNNA*LHVQGG Trigger: GCCACCCTGGACATGCAGTCAGGCATTATTCATGCA...TCTCTTGCAGAGTTGGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPQGFTLPPHTLSKGPLQGKKAR*PGSDSV Trigger: AACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCC...CTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCGGACCCTTCAGCTAGTTTGCTGGAGCCAATGTCAGAGAGGGAAGGGTGGGCAGTAGATGGCATTTaGTGTGGTTCGAGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TADPSASLLEPMSEREGWAVDGI*CGSSRG Trigger: ACCTCTGCTCGAACCACAGCAAATGCCATCTACTGC...CCACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR GCA 90 bp | GCGGCCCTCTCCCAGGAGGCAGAGAGCACAGCTTTAGGTAGTGTAAGCCTTTTTCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: AALSQEAESTALGSVSLFPCIPK*KLSAHQ Trigger: TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGG...AAAAAGGCTTACACTACCTAAAGCTGTGCTCTCTGCCTCCTGGGAGAGGGCCGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACACCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: RAVSIGKAVRTRRCSVSTPCIPK*KLSAHQ Trigger: TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGG...TGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCKRRQSSVNRESREDQTPCIPK*KLSAHQ Trigger: TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGG...CGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGAGCCACACATTTCAATaGTTCTGTCTGCCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAFPQGFTLPPHTLSKGPSHTFQ*FCLPPC Trigger: GCAGGGAGGCAGACAGAAGCATTGAAATGTGTGGCT...CGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCCCGCTCACCAAAGCCTaGACATCTTCTGGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRRQSSVNRESREDQTVFPLTKA*TSSGVL Trigger: CAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGG...GAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | GCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AREDRAVSIGKAVRTRRCMCADD*VIPELC Trigger: GCAGAGCTCCGGGATGACCCAATCATCAGCACACAT...ACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | GACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGCCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTSLASNAWRKKVLFSDLPPGRC*VETGLS Trigger: AGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGG...CAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR TCA 90 bp | GAGGACCAGACGGTGTTCAGTGTCGACAGGCAGAGGACAGTGCTGCCTGACCCTTGCCTCATAGAAGTATaGGTATGCAGTTTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EDQTVFSVDRQRTVLPDPCLIEV*VCSFPV Trigger: GACTGGAAAACTGCATACTCATACTTCTATGAGGCA...AGGGTCAGGCAGCACTGTCCTCTGCCTGTCGACACTGAACACCGTCTGGTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGAGCAGTAGATGGCATTTaGTGTGGTTCGAGCAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPQGFTLPPHTLSKGAVDGI*CGSSRG Trigger: ACCTCTGCTCGAACCACAGCAAATGCCATCTACTGC...TCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGTTCTGTCTGCCTCCCTaGATACCGAAGTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCKRRQSSVNRESREDQTFCLPP*IPKCKL Trigger: AAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAA...CGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACAAGCCACACATTTCAATaGTTCTGTCTGCCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RAVSIGKAVRTRRCSVSTSHTFQ*FCLPPC Trigger: GCAGGGAGGCAGACAGAAGCATTGAAATGTGTGGCT...TGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGGCCAGAGACTGGGCTCTCTaGAACTCCACCACCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TSLASNAWRKKVLFSDLARDWAL*NSTTAA Trigger: CGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCT...GGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172615.8 |
||
| CDS-3UTR CCA 90 bp | TGGCATTTGCTGTGGTTCGAGCAGAGGTTAAGGCAGCTCGGGCTTTCGGCAGATTGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: WHLLWFEQRLRQLGLSADCHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...ATCTGCCGAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172773.8 ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCCCGCTCACCAAAGCCTaGACATCTTCTGGGGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRLSLDTDAPMRVKNFPSPLTKA*TSSGVL Trigger: CAACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGG...GCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | AGCAATTTCCCCATTCCCGTGTTGGCCAGTACGGATTACATGAGAACTGGCCGCATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SNFPIPVLASTDYMRTGRMCADD*VIPELC Trigger: GCAGAGCTCCGGGATGACCCAATCATCAGCACACAT...GCGGCCAGTTCTCATGTAATCCGTACTGGCCAACACGGGAATGGGGAAATTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTCCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRMPHRSMSMQFSSPPPGRC*VETGLS Trigger: AGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGG...AGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | TCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGACCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SWYQNTKTPALPPMLGVRPPGRC*VETGLS Trigger: AGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGG...TCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR TCA 90 bp | TGTTCAATCTGGACTCGGGAAAAAGGCTCGATGACCCGGATCAGATTCTGTTCCGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: CSIWTREKGSMTRIRFCSGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...GGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACATTCTCCTCTGCTGCATaGATAATGCCTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: RAVSIGKAVRTRRCSVSTFSSAA*IMPDCM Trigger: CATGCAGTCAGGCATTATTCATGCAGCAGAGGAGAA...TGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGGCCAGCACTCACCTATGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQGQHSPMSASWLCCRGSLFLLA*ATHFNA Trigger: AGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAG...ACTCCCTCTACAGCAAAGCCAAGAAGCTGACATAGGTGAGTGCTGGCCCTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR TCA 90 bp | GTGGGCACAGCAAAGGTGCAGGCGCTTACCTGCCCACAAGGCATCAAAGCCTGCACTTTACTCATGTTCTaGATAGTTTCCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGTAKVQALTCPQGIKACTLLMF*IVSRAA Trigger: AGCTGCTCTGGAAACTATTCAGAACATGAGTAAAGT...GCAGGCTTTGATGCCTTGTGGGCAGGTAAGCGCCTGCACCTTTGCTGTGCCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR TCA 90 bp | GGCTATCAATGGAGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGAACTCCCGAAGCAGCTaGGAACCTCCTGCCCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GYQWSRSLRMPHRSMSMQNSRSS*EPPALW Trigger: CCACAGGGCAGGAGGTTCTCAGCTGCTTCGGGAGTT...CTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACTCCATTGATAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172773.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAATGCTTCTGTCTaGCTCCCTGCATACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CKRRQSSVNRESREDQTVFNASV*LPAYRS Trigger: ACTTCGGTATGCAGGGAGGCAGACAGAAGCATTGAA...CACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGACAAGAATCAGTTTGTGACCCTGATGTAATGAGGATTCCAGGGACCACTAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRQESVCDPDVMRIPGTTSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...AGTGGTCCCTGGAATCCTCATTACATCAGGGTCACAAACTGATTCTTGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRMPHRSMSMQFSSPSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...AGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAAAGACAAGAATCAGTAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LAHSMHSKHSSTSKTRISSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...ACTGATTCTTGTCTTTGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGTACTTCCACCAAAAGGGCTTTATCATCCATCTTTTTCAACTCCCGAAGCAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SCTSTKRALSSIFFNSRSSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...GCTTCGGGAGTTGAAAAAGATGGATGATAAAGCCCTTTTGGTGGAAGTACAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | TTCAATCTGGACTCGGGAAAAAGGCTCGATGACCCGGATCAGATTCTGTTCCAGCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNLDSGKRLDDPDQILFQRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...CTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCCGACCTCCTGCCCTGTaGCTGCTTCCATATCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSLDTDAPMRVKNFPSRPPAL*LLPYLE Trigger: TTCTAGATATGGAAGCAGCCACAGGGCAGGAGGTCG...GCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACCAGACGGTGTTCAGTGTCGACAGGCAGAGGACAGTGCTGCCTGACCCTTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: EDQTVFSVDRQRTVLPDPFFSLI*PIRCTL Trigger: TAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAA...AGGGTCAGGCAGCACTGTCCTCTGCCTGTCGACACTGAACACCGTCTGGTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCCTTGCCTCCAATGCTTaGCGTAAGAAAGTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PKGSLSRHTHSPKDRYRSLASNA*RKKVLF Trigger: GAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAG...GGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGGAAAGTTCTTTTCTCTaGTTTGGCCCATTCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPQGFTLPPHTLSKGPLQESSFL*FGPFDA Trigger: TGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTC...CTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | GCACAGCGGACCCTTCAGCTAGTTTGCTGGAGCCAATGTCAGAGAGGGAAGGGTTGCCTCATAGAAGTATaGGTATGCAGTTTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AQRTLQLVCWSQCQRGKGCLIEV*VCSFPV Trigger: GACTGGAAAACTGCATACTCATACTTCTATGAGGCA...ACCCTTCCCTCTCTGACATTGGCTCCAGCAAACTAGCTGAAGGGTCCGCTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACACTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVSIGKAVRTRRCSVSTLFLLA*ATHFNA Trigger: AGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAG...TGTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGTTCAAAATCTGCCAGTaGTCTGTTCTTGCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DRAVSIGKAVRTRRCSVSFKICQ*SVLASL Trigger: CAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAA...CGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGAATTTGGCCCATTCGATaGACTCTAAACATAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FPKGSLSRHTHSPKDRYRIWPIR*TLNIAR Trigger: TCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAAT...TCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | GGCCAGCACTCACCTATGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCCACTATTCAATGCTTCTGTCTaGCTCCCTGCATACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GQHSPMSASWLCCRGSPLFNASV*LPAYRS Trigger: ACTTCGGTATGCAGGGAGGCAGACAGAAGCATTGAA...TAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACATAGGTGAGTGCTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR GCA 90 bp | AAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCTTCAATGCTTCTGTCTaGCTCCCTGCATACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRRQSSVNRESREDQTVFFNASV*LPAYRS Trigger: ACTTCGGTATGCAGGGAGGCAGACAGAAGCATTGAA...GAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | AATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAAGCCACACATTTCAATaGTTCTGTCTGCCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLLAFPQGFTLPPHTLSKSHTFQ*FCLPPC Trigger: GCAGGGAGGCAGACAGAAGCATTGAAATGTGTGGCT...TTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLDTDAPMRVKNFPSEKVIPEL*PVVCQG Trigger: GCCCTGACAGACTACAGGGCAGAGCTCCGGGATGAC...CTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGGGCTATCAATGGAGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTCAGCTGAGAACCTCCTaGCCTGTGGCTGCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: PWGYQWSRSLRMPHRSMSQLRTS*PVAASI Trigger: TATGGAAGCAGCCACAGGGCAGGAGGTTCTCAGCTG...ACTCATACTTCTATGAGGCATTCGAAGGCTACGACTCCATTGATAGCCCCAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172773.8 |
||
| CDS-3UTR CCA 90 bp | AGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTTCTCCTAGAGACTGGGCTCTCTaGAACTCCACCACCGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SLRMPHRSMSMQFSSPSPRDWAL*NSTTAA Trigger: CGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCT...AGGAGAAGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172773.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGATTCTGTTCCAGTAAGTTATCGTACAGCTTGGCCAAATGTGTGCTGATGAGTGGAGGATGTCGATaGAGGCCTCCCGGTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: IRFCSSKLSYSLAKCVLMSGGCR*RPPGRC Trigger: GCACCGACCGGGAGGCCTCCATCGACATCCTCCACT...CATCAGCACACATTTGGCCAAGCTGTACGATAACTTACTGGAACAGAATCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGGCCCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TSLASNAWRKKVLFSDLARFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...GGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR CCA 90 bp | AATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAATGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: NLLAFPQGFTLPPHTLSKCHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...TTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | TCAACTCCCGAAGCAGCTGAGAACCCAAATGCAATGCTTCCTGGTACCTCTTGGTGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: STPEAAENPNAMLPGTSWCHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...CCAAGAGGTACCAGGAAGCATTGCATTTGGGTTCTCAGCTGCTTCGGGAGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | AGATTCTGTTCCAGTAAGTTATCGTACAGCTTGGCCAAATGTGTGCTGATGATTCCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFCSSKLSYSLAKCVLMIPPGRC*VETGLS Trigger: AGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGG...AATCATCAGCACACATTTGGCCAAGCTGTACGATAACTTACTGGAACAGAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR TCA 90 bp | GACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DTSLASNAWRKKVLFSDLGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...CAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTCCCTGCATACCGAAGTGCAAGCTTTCCGCTCACCAAAGCCTGGACATCTGAAAGTTCTTTTCTCTaGTTTGGCCCATTCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: CLPAYRSASFPLTKAWTSESSFL*FGPFDA Trigger: TGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTC...AGATGTCCAGGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | GGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCTTCTCCTCTGCTGCATaGATAATGCCTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: GRLSLDTDAPMRVKNFPSFSSAA*IMPDCM Trigger: CATGCAGTCAGGCATTATTCATGCAGCAGAGGAGAA...GCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | AGCAATTTCCCCATTCCCGTGTTGGCCAGTACGGATTACATGAGAACTGGCCGCCTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: SNFPIPVLASTDYMRTGRLFLLA*ATHFNA Trigger: AGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAG...GCGGCCAGTTCTCATGTAATCCGTACTGGCCAACACGGGAATGGGGAAATTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCAACTCTGCAAGAGTTCAAAATCTGCCAGTaGTCTGTTCTTGCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPATHTLQRTATDPTLQEFKICQ*SVLASL Trigger: CAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAA...CTCTTGCAGAGTTGGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | GACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACTTTACTCATGTTCTaGATAGTTTCCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DRAVSIGKAVRTRRCSVSTLLMF*IVSRAA Trigger: AGCTGCTCTGGAAACTATTCAGAACATGAGTAAAGT...CGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATCTGGACTCGGGAAAAAGGCTCGATGACCCGGATCAGATTCTGTTCCAGAGTTCAAGGATGCTCTaGTCTTTGACCTGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FNLDSGKRLDDPDQILFQSSRML*SLTWTA Trigger: GGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACT...CTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGATTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACCAGACGGTGTTCAGTGTCGACAGGCAGAGGACAGTGCTGCCTGACCCTGAGCATGGTAAGTTTTaGTTTCTAAAAGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: EDQTVFSVDRQRTVLPDPEHGKF*FLKAVL Trigger: AAGTACAGCTTTTAGAAAGCAAAACTTACCATGCTC...AGGGTCAGGCAGCACTGTCCTCTGCCTGTCGACACTGAACACCGTCTGGTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAAGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGVGQQEPFVHLIMMVPKVIPEL*PVVCQG Trigger: GCCCTGACAGACTACAGGGCAGAGCTCCGGGATGAC...TTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR GCA 90 bp | TGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WCWSARTVCTFDNDGAKTVIPEL*PVVCQG Trigger: GCCCTGACAGACTACAGGGCAGAGCTCCGGGATGAC...GGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR CCA 90 bp | AGAACTGGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RTGRLSLDTDAPMRVKNFRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...AAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCCAGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | GCTCTGCCCTGTAGTCTGTCAGGGCCTTTTCAAAATCTGCCAGTGATCTGTTCTTGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPCSLSGPFQNLPVICSCHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...AGAACAGATCACTGGCAGATTTTGAAAAGGCCCTGACAGACTACAGGGCAGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172847.8 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | AGATGGCATTTGCTGTGGTTCGAGCAGAGGTTAAGGCAGCTCGGGCTTTCGGCACTTGCCTCCAATGCTTaGCGTAAGAAAGTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWHLLWFEQRLRQLGLSALASNA*RKKVLF Trigger: GAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAG...TGCCGAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | CGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSLDTDAPMRVKNFPSEMCADD*VIPELC Trigger: GCAGAGCTCCGGGATGACCCAATCATCAGCACACAT...TTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | GAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: EDRAVSIGKAVRTRRCSVSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...CACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | CAATGGAGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QWSRSLRMPHRSMSMQFSGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...GGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACTCCATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | CTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLDTDAPMRVKNFPSEKGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...CTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | CTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGAACTTTACTCATGTTCTaGATAGTTTCCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLAFPQGFTLPPHTLSKGTLLMF*IVSRAA Trigger: AGCTGCTCTGGAAACTATTCAGAACATGAGTAAAGT...TCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACCATAGCTCGACCTCCTaGCCTGTGGCTGCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LDTDAPMRVKNFPSEKWNHSSTS*PVAASI Trigger: TATGGAAGCAGCCACAGGGCAGGAGGTCGAGCTATG...GTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCCACTACTTTACTCATGTTCTGCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQLLGFAVEGVHYFTHVLPCIPK*KLSAHQ Trigger: TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGG...CAGAACATGAGTAAAGTAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR GCA 90 bp | CGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAATTCTGTCTGCCTCCCTaGATACCGAAGTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLSLDTDAPMRVKNFPSEFCLPP*IPKCKL Trigger: AAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAA...TTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | GGAACAGAAAGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCTTCAATGCTTCTGTCTaGCTCCCTGCATACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTERKESPSISPRVHSPAFNASV*LPAYRS Trigger: ACTTCGGTATGCAGGGAGGCAGACAGAAGCATTGAA...GGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCTTTCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTGAATAGTTTCCAGAGCAGCTTCATAAGTTTTATCTACTGGGGGTTCATCGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNSFQSSFISFIYWGFIVIPEL*PVVCQG Trigger: GCCCTGACAGACTACAGGGCAGAGCTCCGGGATGAC...GATGAACCCCCAGTAGATAAAACTTATGAAGCTGCTCTGGAAACTATTCAGAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR CCA 90 bp | AGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRMPHRSMSMQFSSPRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...AGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | CGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAATGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: RLSLDTDAPMRVKNFPSECHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...TTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | GTACCTCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGTGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VPLGIKIQRHQPCLQCLACHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...CGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTGGCCTGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLASNAWRKKVLFSDLACHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...GGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR CCA 90 bp | GGAACAGAAAGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCAGATGGCATTTGCTGTaGTTCGAGCAGAGGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTERKESPSISPRVHSPARWHLL*FEQRLR Trigger: CCTTAACCTCTGCTCGAACCACAGCAAATGCCATCT...GGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCTTTCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CCA 90 bp | CACCTATGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCCACTACTTTACTCATAGGAAGGTTCTCACCTaGACTCGGGAAAAAGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HLCQLLGFAVEGVHYFTHRKVLT*TREKGS Trigger: CGAGCCTTTTTCCCGAGTCCAGGTGAGAACCTTCCT...ATGAGTAAAGTAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACATAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| 3UTR CAA 72 bp | CGGATCAGATTCTGTTCCAGTAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATGATTGGGTCATCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RIRFCSSKLSYS*AKCVLMIGSSR Trigger: CCGGGATGACCCAATCATCAGCACACATTTGGCCAAGCTGTACGATAACTTACTGGAACAGAATCTGATCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR TCA 90 bp | TATCATCCATCTTTTTCAACTCCCGAAGCAGCTGAGAACCCAAATGCAATGCTTGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YHPSFSTPEAAENPNAMLGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...AAGCATTGCATTTGGGTTCTCAGCTGCTTCGGGAGTTGAAAAAGATGGATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | AAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KYKDTSLASNAWRKKVLFGCSAL*PGLPPH Trigger: ATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCC...GAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR TCA 90 bp | GGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAGTTCTTTTCTCTaGTTTGGCCCATTCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSLDTDAPMRVKNFPSESSFL*FGPFDA Trigger: TGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTC...GCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACTGCATGAATAATGCCTaGCTGCATGTCCAGGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDTDAPMRVKNFPSEKWNCMNNA*LHVQGG Trigger: GCCACCCTGGACATGCAGTCAGGCATTATTCATGCA...GTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | AAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCACTTTACTCATGTTCTaGATAGTTTCCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KRRQSSVNRESREDQTVFTLLMF*IVSRAA Trigger: AGCTGCTCTGGAAACTATTCAGAACATGAGTAAAGT...GAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | ATCATCTGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTTGATGAGGCTACTAGCCCAAGACTGTTaGCAAGGCTCCCAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IICDNFLSTSALESLMRLLAQDC*QGSQEG Trigger: ACCTTCCTGGGAGCCTTGTCAACAGTCTTGGGCTAG...TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR GCA 90 bp | TGGTACCTCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGAGTTCAAGGATGCTCTaGTCTTTGACCTGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WYLLVSKYKDTSLASNAWSSRML*SLTWTA Trigger: GGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACT...CCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR GCA 90 bp | AGGATTCCAGGGACCACTGACAATCTCCACTTACAAAGCAAAGCATGGAACAGAAGTTCAAGGATGCTCTaGTCTTTGACCTGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIPGTTDNLHLQSKAWNRSSRML*SLTWTA Trigger: GGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACT...TCTGTTCCATGCTTTGCTTTGTAAGTGGAGATTGTCAGTGGTCCCTGGAATCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
||
| CDS-3UTR GCA 90 bp | CTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLDTDAPMRVKNFPSEKPCIPK*KLSAHQ Trigger: TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGG...CTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | TCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGTTCTGTCTGCCTCCCTaGATACCGAAGTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLDTDAPMRVKNFPSEKWFCLPP*IPKCKL Trigger: AAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAA...CCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CACCTATGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCCACTACTTTACTCATAGCCACACATTTCAATaGTTCTGTCTGCCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HLCQLLGFAVEGVHYFTHSHTFQ*FCLPPC Trigger: GCAGGGAGGCAGACAGAAGCATTGAAATGTGTGGCT...ATGAGTAAAGTAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACATAGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTTTTCTCTGATTTGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KFFSLIWPIRCTLNIARPRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...AGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR CCA 90 bp | TATCATCCATCTTTTTCAACTCCCGAAGCAGCTGAGAACCCAAATGCAATGCTTCGTTTCACGATGGAGTaGAGGATGTCGATGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: YHPSFSTPEAAENPNAMLRFTME*RMSMEA Trigger: GGCCTCCATCGACATCCTCCACTCCATCGTGAAACG...AAGCATTGCATTTGGGTTCTCAGCTGCTTCGGGAGTTGAAAAAGATGGATGATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACCGACCTCCTGCCCTGTaGCTGCTTCCATATCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LDTDAPMRVKNFPSEKWNRPPAL*LLPYLE Trigger: TTCTAGATATGGAAGCAGCCACAGGGCAGGAGGTCG...GTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | AGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTTGCCTCATAGAAGTATaGGTATGCAGTTTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RKESPSISPRVHSPATHTCLIEV*VCSFPV Trigger: GACTGGAAAACTGCATACTCATACTTCTATGAGGCA...AGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDTDAPMRVKNFPSEKWNGKKAR*PGSDSV Trigger: AACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCC...GTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | CAATGGAGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTTCAAGGATGCTCTaGTCTTTGACCTGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QWSRSLRMPHRSMSMQFSSSRML*SLTWTA Trigger: GGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACT...GGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACTCCATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATCATAGCTCGACCTCCTaGCCTGTGGCTGCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LNIRYTWCWSARTVCTFDHSSTS*PVAASI Trigger: TATGGAAGCAGCCACAGGGCAGGAGGTCGAGCTATG...ATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR CCA 90 bp | CAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACAGGGACTGGTGCTGAGTAGAGACTaGGCTCTCTGGAACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: QEPFVHLIMMVPKPKQGLVLSRD*ALWNST Trigger: GGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCAC...CAGTCCCTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR CCA 90 bp | ACTCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACAATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: THLNIRYTWCWSARTVCTMCADD*VIPELC Trigger: GCAGAGCTCCGGGATGACCCAATCATCAGCACACAT...TGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTGAACCTCCTGCCCTGTaGCTGCTTCCATATCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRMPHRSMSMQFSSPEPPAL*LLPYLE Trigger: TTCTAGATATGGAAGCAGCCACAGGGCAGGAGGTTC...AGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172773.8 |
||
| 3UTR CAA 72 bp | AAAGCCTGGACATCTTCTGGGGTGTTGAGCATGATTTaGCACAGCAACATGTACTTCAGAGATGTGATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAWTSSGVLSMI*HSNMYFRDVMA Trigger: GGCCATCACATCTCTGAAGTACATGTTGCTGTGCAAAATCATGCTCAACACCCCAGAAGATGTCCAGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | GCTCTGCCCTGTAGTCTGTCAGGGCCTTTTCAAAATCTGCCAGTGATCTGTTCTTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: ALPCSLSGPFQNLPVICSSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...AGAACAGATCACTGGCAGATTTTGAAAAGGCCCTGACAGACTACAGGGCAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172847.8 ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | CTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACTTCTCCTCTGCTGCATaGATAATGCCTGACTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LDTDAPMRVKNFPSEKWNFSSAA*IMPDCM Trigger: CATGCAGTCAGGCATTATTCATGCAGCAGAGGAGAA...GTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTTGATGAGGCTAGATGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ICDNFLSTSALESLMRLDGKKAR*PGSDSV Trigger: AACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCC...ATCTAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAAGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGVGQQEPFVHLIMMVPKGKKAR*PGSDSV Trigger: AACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCC...TTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACAGGGACCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: QQEPFVHLIMMVPKPKQGPCIPK*KLSAHQ Trigger: TTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGG...TCCCTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR GCA 90 bp | TATTGGAACTCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTAGCCACACATTTCAATaGTTCTGTCTGCCTCCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YWNSSEHQIYLVLVSKNRSHTFQ*FCLPPC Trigger: GCAGGGAGGCAGACAGAAGCATTGAAATGTGTGGCT...ACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR GCA 90 bp | TGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGCGTAAGAAAGACAAAGAGAAACTCCTaGCCTGTGGCTGCTTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: WYQNTKTPALPPMLGVRKTKRNS*PVAASI Trigger: TATGGAAGCAGCCACAGGGCAGGAGTTTCTCTTTGT...CTTTCTTACGCCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172615.8 |
||
| CDS-3UTR CCA 90 bp | CTTTATCATCCATCTTTTTCAACTCCCGAAGCAGCTGAGAACCCAAATGCAATGTGTCACGTTTCACGATaGAGTGGAGGATGTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LYHPSFSTPEAAENPNAMCHVSR*SGGCRW Trigger: CCATCGACATCCTCCACTCCATCGTGAAACGTGACA...CATTGCATTTGGGTTCTCAGCTGCTTCGGGAGTTGAAAAAGATGGATGATAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | CTGATTTGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAAAGACAAGAAGAAACTCCTGCCCTGTaGCTGCTTCCATATCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LIWPIRCTLNIARPQRQEETPAL*LLPYLE Trigger: TTCTAGATATGGAAGCAGCCACAGGGCAGGAGTTTC...TTCTTGTCTTTGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172615.8 |
||
| CDS-3UTR TCA 90 bp | AGAACTGGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTTTCAAAATCTGCCAGTaGTCTGTTCTTGCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTGRLSLDTDAPMRVKNFFKICQ*SVLASL Trigger: CAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAA...AAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCCAGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAGCTTCTTGGCTTTGCTGTAGAGGGAGTCCACTACTTTACTCATGTTCTGTTCAAAATCTGCCAGTaGTCTGTTCTTGCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CQLLGFAVEGVHYFTHVLFKICQ*SVLASL Trigger: CAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAA...CAGAACATGAGTAAAGTAGTGGACTCCCTCTACAGCAAAGCCAAGAAGCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACAGGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GQQEPFVHLIMMVPKPKQGKKAR*PGSDSV Trigger: AACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCC...CTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR GCA 90 bp | TCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTAGTTCAAGGATGCTCTaGTCTTTGACCTGGACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEHQIYLVLVSKNRLYISSRML*SLTWTA Trigger: GGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACT...AATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR CCA 90 bp | ATCATCTGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTTGATGAGGCTAAATGCTCCTGCCCTGTaGCTGCTTCCATATCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IICDNFLSTSALESLMRLNAPAL*LLPYLE Trigger: TTCTAGATATGGAAGCAGCCACAGGGCAGGAGCATT...TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| 3UTR CAA 72 bp | TCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCTAAACATAGCTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: SNAWRKKVLFSD*AHSMHSKHSST Trigger: GGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| 3UTR CAA 72 bp | TGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGTTCAATCTGGACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CDNFLSTSALES*MRLDMCSIWTR Trigger: CCGAGTCCAGATTGAACACATATCTAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR TCA 90 bp | TGGTACCTCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGGTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: WYLLVSKYKDTSLASNAWSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...CCAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR GCA 90 bp | CTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGATTTGGCCCATTCGATaGACTCTAAACATAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLDTDAPMRVKNFPSEKIWPIR*TLNIAR Trigger: TCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAAT...CTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR GCA 90 bp | TTCCACCAAAAGGGCTTTATCATCCATCTTTTTCAACTCCCGAAGCAGCTGAGAATTTGGCCCATTCGATaGACTCTAAACATAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FHQKGFIIHLFQLPKQLRIWPIR*TLNIAR Trigger: TCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAAT...TCTCAGCTGCTTCGGGAGTTGAAAAAGATGGATGATAAAGCCCTTTTGGTGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTAGATATGTGTTCAATCCTTGAAAGTGAGTTCCTATTTTGGACAACTGTGTTCTGTCTGCCTCCCTaGATACCGAAGTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RLDMCSILESEFLFWTTVFCLPP*IPKCKL Trigger: AAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAA...CACAGTTGTCCAAAATAGGAACTCACTTTCAAGGATTGAACACATATCTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR GCA 90 bp | AGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTTTCTGTCTGCCTCCCTaGATACCGAAGTGCAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYTWCWSARTVCTFDNDGFCLPP*IPKCKL Trigger: AAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAA...ACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR GCA 90 bp | CTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATTTCAATGCTTCTGTCTaGCTCCCTGCATACCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LNIRYTWCWSARTVCTFDFNASV*LPAYRS Trigger: ACTTCGGTATGCAGGGAGGCAGACAGAAGCATTGAA...ATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR CCA 90 bp | TCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTAGATGGCATTTGCTGTaGTTCGAGCAGAGGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSEHQIYLVLVSKNRLYIRWHLL*FEQRLR Trigger: CCTTAACCTCTGCTCGAACCACAGCAAATGCCATCT...AATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR CCA 90 bp | GATATGTGTTCAATCCTTGAAAGTGAGTTCCTATTTTGGACAACTGTGGAGAAAATGTGTGCTGATGATTaGGTCATCCCGGAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DMCSILESEFLFWTTVEKMCADD*VIPELC Trigger: GCAGAGCTCCGGGATGACCCAATCATCAGCACACAT...TTTCTCCACAGTTGTCCAAAATAGGAACTCACTTTCAAGGATTGAACACATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| 3UTR CAA 72 bp | ATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTaGATAATGATGGTGCCAAAACCAAAACAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: IPGVGQQEPFVH*IMMVPKPKQGL Trigger: CAGTCCCTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR TCA 90 bp | AGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRMPHRSMSMQFSSPSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...AGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172773.8 ENSMUST00000174743.8 |
||
| CDS-3UTR CCA 90 bp | AGTCGTAGCCTTCGAATGCCTCATAGAAGTATGAGTATGCAGTTTTCCAGTCCTTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRSLRMPHRSMSMQFSSPFFSLI*PIRCTL Trigger: TAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAA...AGGACTGGAAAACTGCATACTCATACTTCTATGAGGCATTCGAAGGCTACGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | ACATCTTCTGGGGTGTTGAGCATGATTTTGCACAGCAACATGTACTTCAGAGATTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: TSSGVLSMILHSNMYFRDSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...ATCTCTGAAGTACATGTTGCTGTGCAAAATCATGCTCAACACCCCAGAAGATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR TCA 90 bp | TGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACACTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSARTVCTFDNDGAKTKTLFLLA*ATHFNA Trigger: AGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAG...TGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACAGGGACTTGCCTCCAATGCTTaGCGTAAGAAAGTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQEPFVHLIMMVPKPKQGLASNA*RKKVLF Trigger: GAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAG...TCCCTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR TCA 90 bp | ATAGCTCGACCTCAAAGACAAGAATCAGTTTGTGACCCTGATGTAATGAGGATTTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: IARPQRQESVCDPDVMRISSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...AATCCTCATTACATCAGGGTCACAAACTGATTCTTGTCTTTGAGGTCGAGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
||
| CDS-3UTR TCA 90 bp | AACCCAAATGCAATGCTTCCTGGTACCTCTTGGTATCAAAATACAAAGACACCATCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: NPNAMLPGTSWYQNTKTPSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...TGGTGTCTTTGTATTTTGATACCAAGAGGTACCAGGAAGCATTGCATTTGGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR TCA 90 bp | ATCAGATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATCTGTTCTTGCTAGCTTaGGCCACACATTTCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IRYTWCWSARTVCTFDNDLFLLA*ATHFNA Trigger: AGCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAG...ATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATCTGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR TCA 90 bp | GATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGACTTTACTCATGTTCTaGATAGTTTCCAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DIPGVGQQEPFVHLIMMVTLLMF*IVSRAA Trigger: AGCTGCTCTGGAAACTATTCAGAACATGAGTAAAGT...CACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTGGAACTCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGAACCTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTA | + |
|
Preference number: 4 (lower is better) Translates to: FIGTHLNIRYTWCWSARTFFSLI*PIRCTL Trigger: TAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAA...GGTTCTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| 3UTR CAA 72 bp | TTGGTTCAGTACAAACAGAATAAAAAGTCGTTGCTTTaGATGGTCAGCAAACACCCAATTCTGAAGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVQYKQNKKSLL*MVSKHPILKRR Trigger: CCTCCTCTTCAGAATTGGGTGTTTGCTGACCATCAAAAGCAACGACTTTTTATTCTGTTTGTACTGAACCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR TCA 90 bp | TTATTTTATTGGAACTCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGTTCAAAATCTGCCAGTaGTCTGTTCTTGCTAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFYWNSSEHQIYLVLVSKFKICQ*SVLASL Trigger: CAAGCTAGCAAGAACAGATCACTGGCAGATTTTGAA...CTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR TCA 90 bp | TTATTTTATTGGAACTCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGTCCTCATCATTTTCTTaGATGTCACGTTTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LFYWNSSEHQIYLVLVSKSSSFS*MSRFTM Trigger: CATCGTGAAACGTGACATTCAAGAAAATGATGAGGA...CTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS-3UTR GCA 90 bp | GGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACAGGAGCATGGTAAGTTTTaGTTTCTAAAAGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: GQQEPFVHLIMMVPKPKQEHGKF*FLKAVL Trigger: AAGTACAGCTTTTAGAAAGCAAAACTTACCATGCTC...CTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
||
| CDS TCA 90 bp | TCACGATGGAGTGGAGGATGTCGATGGAGGCCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCTGGAACTCCACCACCGCTGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SRWSGGCRWRPPGRC*VETGLSGTPPPLRP Trigger: CGGCCGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGGCCTCCATCGACATCCTCCACTCCATCGTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017572.14 ENSMUST00000172615.8 ENSMUST00000172773.8 ENSMUST00000173938.8 |
||
| CDS GCA 90 bp | CTCTGCCCTGTAGTCTGTCAGGGCCTGCCTCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAAAGCCTGGACATCTTCTGGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: LCPVVCQGLPPCIPK*KLSAHQSLDIFWGV Trigger: AACACCCCAGAAGATGTCCAGGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCAGGCCCTGACAGACTACAGGGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148895.9 |
||
| CDS-3UTR CAA 90 bp | CTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LAFPQGFTLPPHTLSKGPRMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...CGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGTCTGCCTCCCTGCATACCGAAGTGCAAGCTTTCCGCTCACCAAAGCCAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ASVCLPAYRSASFPLTKARMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...GGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCAGACAGAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCAGTGTCGACAGAGATGTGATGGCCTaGGGGCTATCAATGGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QSSVNRESREDQTVFSVDRDVMA*GLSMES Trigger: CGACTCCATTGATAGCCCCAAGGCCATCACATCTCT...GTCGACACTGAACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGGCATTTGCTGTGGTTCGAGCAGAGGTTAAGGCAGCTCGGGCTTTCGAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRWHLLWFEQRLRQLGLSRMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...CGAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCCATCTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172773.8 ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR CAA 90 bp | AAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCGGCAGTAGATGGCATTaGCTGTGGTTCGAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KNLLAFPQGFTLPPHTLSGSRWH*LWFEQR Trigger: CCTCTGCTCGAACCACAGCAAATGCCATCTACTGCC...GGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATCCATCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PRVHSPATHTLQRTATDPSALES*MRLDMC Trigger: ACACATATCTAGCCTCATCAAACTCTCCAAGGCCGA...TGGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | CCGCCACACACACTCTCCAAAGGACCGCTACAGATCCAACTCTGCAAGAGAAGACTTTCCACGTCGGCCTaGGAGAGTTTGATGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: PPHTLSKGPLQIQLCKRRLSTSA*ESLMRL Trigger: TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAG...TCTTCTCTTGCAGAGTTGGATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173938.8 |
||
| CDS TCA 90 bp | AGGCTCCCAGGAAGGTTCTCACCTGGACTCGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTTCCAGTAAGTTATCGTACAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RLPGRFSPGLGKKAR*PGSDSVPVSYRTAW Trigger: CCAAGCTGTACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGGTGAGAACCTTCCTGGGAGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
||
| CDS-3UTR CAA 90 bp | GCTCTGCCCTGTAGTCTGTCAGGGCCTTTTCAAAATCTGCCAGTGATCTGTTCTAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALPCSLSGPFQNLPVICSRMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...AGAACAGATCACTGGCAGATTTTGAAAAGGCCCTGACAGACTACAGGGCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172847.8 ENSMUST00000174743.8 |
||
| CDS-3UTR CAA 90 bp | TGGCTGCTTCCATATCTAGAAACAGATCAAGAAGAGACCGGACCAGACGAGCTGAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: WLLPYLETDQEETGPDELRMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...CAGCTCGTCTGGTCCGGTCTCTTCTTGATCTGTTTCTAGATATGGAAGCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173186.8 |
||
| CDS-3UTR CAA 90 bp | GGAACAGAAAGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GTERKESPSISPRVHSPARMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...GGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCTTTCTGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGACATCTTCTGGGGTGTaGAGCATGATTTTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SAREDRAVSIGKAVRTRRTSSGV*SMILHS Trigger: GCTGTGCAAAATCATGCTCAACACCCCAGAAGATGT...CCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | TCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGCTACAGATTCTGTTCTTGCTAGCTaGAGCCACACATTTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SPRVHSPATHTLQRTATDSVLAS*SHTFQC Trigger: GCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGA...ATCTGTAGCGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | CTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAGGACCGAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LAFPQGFTLPPHTLSKGPKLSYS*AKCVLM Trigger: CATCAGCACACATTTGGCCAAGCTGTACGATAACTT...CGGTCCTTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTTCTGTTCTTGCTAGCTaGAGCCACACATTTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: AREDRAVSIGKAVRTRRCSVLAS*SHTFQC Trigger: GCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGA...ACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGAAGACAGAGCAGTGTCAATCGGGAAAGCCGTGAGGACCAGACGGTGTAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: AREDRAVSIGKAVRTRRCKLSYS*AKCVLM Trigger: CATCAGCACACATTTGGCCAAGCTGTACGATAACTT...ACACCGTCTGGTCCTCACGGCTTTCCCGATTGACACTGCTCTGTCTTCTCTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129500.8 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGCTTTCCACGTCGGCCTaGGAGAGTTTGATGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: TGRLSLDTDAPMRVKNFPLSTSA*ESLMRL Trigger: TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAG...CGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | AATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAACATCTTCTGGGGTGTaGAGCATGATTTTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLLAFPQGFTLPPHTLSKTSSGV*SMILHS Trigger: GCTGTGCAAAATCATGCTCAACACCCCAGAAGATGT...TTTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTCTCCAAAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ESPSISPRVHSPATHTLQKLSYS*AKCVLM Trigger: CATCAGCACACATTTGGCCAAGCTGTACGATAACTT...TTGGAGAGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS TCA 90 bp | CAGTCTTCGCCAGGAGAGAACCCAGTTCAAGGATGCTCTGCTCTTTaGCCTGGACTGCCTCCTCATCATTTTCTTGAATGTCACGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QSSPGENPVQGCSAL*PGLPPHHFLECHVS Trigger: TGAAACGTGACATTCAAGAAAATGATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACTGGGTTCTCTCCTGGCGAAGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000017572.14 ENSMUST00000172615.8 ENSMUST00000172773.8 ENSMUST00000172847.8 ENSMUST00000173060.2 ENSMUST00000173186.8 ENSMUST00000173938.8 ENSMUST00000174743.8 |
||
| CDS GCA 90 bp | CAGGAGAGAACCCAGTTCAAGGATGCTCTGCTCTTTGACCTGGACTaGCTCCTCATCATTTTCTTGAATGTCACGTTTCACGATGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QERTQFKDALLFDLD*LLIIFLNVTFHDGV Trigger: CACTCCATCGTGAAACGTGACATTCAAGAAAATGATGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCTTGAACTGGGTTCTCTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000017572.14 ENSMUST00000172615.8 ENSMUST00000172773.8 ENSMUST00000172847.8 ENSMUST00000173060.2 ENSMUST00000173186.8 ENSMUST00000173938.8 ENSMUST00000174743.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTGATTTGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAAAGACAAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSDLAHSMHSKHSSTSKTRMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...TGTCTTTGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
||
| CDS-3UTR CAA 90 bp | GGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: GRLSLDTDAPMRVKNFPSVLFSD*AHSMHS Trigger: AGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAAC...GCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | AGCAATTTCCCCATTCCCGTGTTGGCCAGTACGGATTACATGAGAACTGGCCGCGCTTCCTGGTACCTCTaGGTATCAAAATACAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SNFPIPVLASTDYMRTGRASWYL*VSKYKD Trigger: GTCTTTGTATTTTGATACCAAGAGGTACCAGGAAGC...GCGGCCAGTTCTCATGTAATCCGTACTGGCCAACACGGGAATGGGGAAATTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | AGAACTGGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTAGAGATGTGATGGCCTaGGGGCTATCAATGGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RTGRLSLDTDAPMRVKNFRDVMA*GLSMES Trigger: CGACTCCATTGATAGCCCCAAGGCCATCACATCTCT...AAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCCAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | ACTGGCCGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGTCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRLSLDTDAPMRVKNFPSALES*MRLDMC Trigger: ACACATATCTAGCCTCATCAAACTCTCCAAGGCCGA...CGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCGGCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS TCA 90 bp | ATAATTTTCTTTCCACGTCGGCCTGGACTCGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTTCCAGTAAGTTATCGTACAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: IIFFPRRPGLGKKAR*PGSDSVPVSYRTAW Trigger: CCAAGCTGTACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGGCCGACGTGGAAAGAAAATTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129500.8 |
||
| CDS CCA 90 bp | GCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTTaGCCCATTCGATGCACTCTAAACATAGCTCGACCAGCAGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ALPPMLGVRKFFSLI*PIRCTLNIARPAAC Trigger: ACAAGCTGCTGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
||
| CDS-3UTR CAA 90 bp | AGTAGATGGCATTTGCTGTGGTTCGAGCAGAGGTTAAGGCAGCTCGGGCTTTCGCTCCTCATCATTTTCTaGAATGTCACGTTTCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRWHLLWFEQRLRQLGLSLLIIF*NVTFHD Trigger: ATCGTGAAACGTGACATTCAAGAAAATGATGAGGAG...CGAAAGCCCGAGCTGCCTTAACCTCTGCTCGAACCACAGCAAATGCCATCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172773.8 ENSMUST00000173060.2 ENSMUST00000174743.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCTTTTCTCTGATTTGGCCCATTCGATGCACTCTAAACATAGCTCGACCAGGATGCTCTGCTCTTaGACCTGGACTGCCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVLFSDLAHSMHSKHSSTRMLCS*TWTASS Trigger: TGAGGAGGCAGTCCAGGTCAAAGAGCAGAGCATCCT...GGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAAGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCT | + |
|
Preference number: 5 (lower is better) Translates to: QKEKNLLAFPQGFTLPPHVLFSD*AHSMHS Trigger: AGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAAC...GTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GGAACAGAAAGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCTCTGTTCTTGCTAGCTaGAGCCACACATTTCAATGC | + |
|
Preference number: 5 (lower is better) Translates to: GTERKESPSISPRVHSPASVLAS*SHTFQC Trigger: GCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGA...GGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCTTTCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | AGAAAAGAATCTCCTAGCATTTCCCCAAGGGTTCACTCTCCCGCCACACACACTAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RKESPSISPRVHSPATHTKLSYS*AKCVLM Trigger: CATCAGCACACATTTGGCCAAGCTGTACGATAACTT...AGTGTGTGTGGCGGGAGAGTGAACCCTTGGGGAAATGCTAGGAGATTCTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | CGCCTATCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAATCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLSLDTDAPMRVKNFPSESALES*MRLDMC Trigger: ACACATATCTAGCCTCATCAAACTCTCCAAGGCCGA...TTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGATAGGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | TCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGACATCTTCTGGGGTGTaGAGCATGATTTTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLDTDAPMRVKNFPSEKWTSSGV*SMILHS Trigger: GCTGTGCAAAATCATGCTCAACACCCCAGAAGATGT...CCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGAACAGAAAGAAAAGAGATGTGATGGCCTaGGGGCTATCAATGGAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DAPMRVKNFPSEKWNRKKRDVMA*GLSMES Trigger: CGACTCCATTGATAGCCCCAAGGCCATCACATCTCT...TTTCTTTCTGTTCCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000017572.14 ENSMUST00000148895.9 ENSMUST00000173938.8 |
||
| CDS-3UTR CAA 90 bp | GATATACCTGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCTTTCCACGTCGGCCTaGGAGAGTTTGATGAGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: DIPGVGQQEPFVHLIMMVLSTSA*ESLMRL Trigger: TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAG...CACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCAGGTATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
||
| CDS-3UTR CAA 90 bp | AATGATCAGGACACCCTCCCCCTGGTCCAAAATCCCATGAAACTTCTTGTCAAGCTCCTCATCATTTTCTaGAATGTCACGTTTCACGAT | + |
|
Preference number: 5 (lower is better) Translates to: NDQDTLPLVQNPMKLLVKLLIIF*NVTFHD Trigger: ATCGTGAAACGTGACATTCAAGAAAATGATGAGGAG...CTTGACAAGAAGTTTCATGGGATTTTGGACCAGGGGGAGGGTGTCCTGATCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172847.8 |
||
| CDS-3UTR CAA 90 bp | TCGCTGGATACAGATGCACCAATGAGGGTTAAAAACTTTCCGAGCGAAAAGTGGGCTTCCTGGTACCTCTaGGTATCAAAATACAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLDTDAPMRVKNFPSEKWASWYL*VSKYKD Trigger: GTCTTTGTATTTTGATACCAAGAGGTACCAGGAAGC...CCACTTTTCGCTCGGAAAGTTTTTAACCCTCATTGGTGCATCTGTATCCAGCGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173938.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTATTGGAACTCATCTGAACATCAGATATACCTGGTGTTGGTCAGCAAGGGCAGTAGATGGCATTaGCTGTGGTTCGAGCAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LFYWNSSEHQIYLVLVSKGSRWH*LWFEQR Trigger: CCTCTGCTCGAACCACAGCAAATGCCATCTACTGCC...CTTGCTGACCAACACCAGGTATATCTGATGTTCAGATGAGTTCCAATAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| CDS-3UTR CAA 90 bp | TGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAACTTTCCACGTCGGCCTaGGAGAGTTTGATGAGGCTA | + |
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Preference number: 5 (lower is better) Translates to: CWSARTVCTFDNDGAKTKLSTSA*ESLMRL Trigger: TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAG...TTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
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| CDS-3UTR CAA 90 bp | CTGGTACCTCTTGGTATCAAAATACAAAGACACCAGCCTTGCCTCCAATGCTTGCTCCTCATCATTTTCTaGAATGTCACGTTTCACGAT | + |
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Preference number: 5 (lower is better) Translates to: LVPLGIKIQRHQPCLQCLLLIIF*NVTFHD Trigger: ATCGTGAAACGTGACATTCAAGAAAATGATGAGGAG...CAAGCATTGGAGGCAAGGCTGGTGTCTTTGTATTTTGATACCAAGAGGTACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 ENSMUST00000173186.8 |
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| CDS-3UTR CAA 90 bp | CTTTATCATCCATCTTTTTCAACTCCCGAAGCAGCTGAGAACCCAAATGCAATGGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCT | + |
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Preference number: 5 (lower is better) Translates to: LYHPSFSTPEAAENPNAMVLFSD*AHSMHS Trigger: AGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAAC...CATTGCATTTGGGTTCTCAGCTGCTTCGGGAGTTGAAAAAGATGGATGATAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
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| CDS-3UTR CAA 90 bp | ATCATCTGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTTGATGAGGCTATCTGTTCTTGCTAGCTaGAGCCACACATTTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: IICDNFLSTSALESLMRLSVLAS*SHTFQC Trigger: GCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGA...TAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
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| CDS-3UTR CAA 90 bp | ATCTGTGATAATTTTCTTTCCACGTCGGCCTTGGAGAGTTTGATGAGGCTAGATAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: ICDNFLSTSALESLMRLDKLSYS*AKCVLM Trigger: CATCAGCACACATTTGGCCAAGCTGTACGATAACTT...ATCTAGCCTCATCAAACTCTCCAAGGCCGACGTGGAAAGAAAATTATCACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
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| CDS-3UTR CAA 90 bp | TGGTGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAGTTATCGTACAGCTaGGCCAAATGTGTGCTGATG | + |
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Preference number: 5 (lower is better) Translates to: WCWSARTVCTFDNDGAKTKLSYS*AKCVLM Trigger: CATCAGCACACATTTGGCCAAGCTGTACGATAACTT...GGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
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| CDS-3UTR CAA 90 bp | TTCTCTGATTTGGCCCATTCGATGCACTCTAAACATAGCTCGACCTCAAAGACACTCCTCATCATTTTCTaGAATGTCACGTTTCACGAT | + |
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Preference number: 5 (lower is better) Translates to: FSDLAHSMHSKHSSTSKTLLIIF*NVTFHD Trigger: ATCGTGAAACGTGACATTCAAGAAAATGATGAGGAG...TGTCTTTGAGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172615.8 ENSMUST00000173060.2 |
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| CDS-3UTR CAA 90 bp | CAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAAACAGGGACTGTCTGTTCTTGCTAGCTaGAGCCACACATTTCAATGC | + |
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Preference number: 5 (lower is better) Translates to: QEPFVHLIMMVPKPKQGLSVLAS*SHTFQC Trigger: GCATTGAAATGTGTGGCTCAAGCTAGCAAGAACAGA...CAGTCCCTGTTTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAATCGGCCTTGGAGAGTTaGATGAGGCTAGATATGTGT | + |
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Preference number: 5 (lower is better) Translates to: CWSARTVCTFDNDGAKTKSALES*MRLDMC Trigger: ACACATATCTAGCCTCATCAAACTCTCCAAGGCCGA...TTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017572.14 ENSMUST00000173797.8 |
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| CDS-3UTR CAA 90 bp | TGTTGGTCAGCAAGAACCGTTTGTACATTTGATAATGATGGTGCCAAAACCAAACTCCTCATCATTTTCTaGAATGTCACGTTTCACGAT | + |
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Preference number: 5 (lower is better) Translates to: CWSARTVCTFDNDGAKTKLLIIF*NVTFHD Trigger: ATCGTGAAACGTGACATTCAAGAAAATGATGAGGAG...TTTGGTTTTGGCACCATCATTATCAAATGTACAAACGGTTCTTGCTGACCAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017572.14 |
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| CDS CCA 72 bp | TCGATGGAGGCCTCCCGGTCGGTGCTGAGTAGAGACTaGGCTCTCTGGAACTCCACCACCGCTGCGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SMEASRSVLSRD*ALWNSTTAAAA Trigger: GGCGGCCGCAGCGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGGCCTCCATCGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017572.14 ENSMUST00000172615.8 ENSMUST00000172773.8 ENSMUST00000173938.8 |
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| CDS TCA 72 bp | AGTGGAGGATGTCGATGGAGGCCTCCCGGTCGGTGCTaGGTAGAGACTGGGCTCTCTGGAACTCCACCACCG | + |
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Preference number: 6 (lower is better) Translates to: SGGCRWRPPGRC*VETGLSGTPPP Trigger: CGGTGGTGGAGTTCCAGAGAGCCCAGTCTCTACTCAGCACCGACCGGGAGGCCTCCATCGACATCCTCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000017572.14 ENSMUST00000172615.8 ENSMUST00000172773.8 ENSMUST00000173938.8 |
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| CDS GCA 72 bp | GTAGTCTGTCAGGGCCTGCCTCCCTGCATACCGAAGTaGAAGCTTTCCGCTCACCAAAGCCTGGACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VVCQGLPPCIPK*KLSAHQSLDIF Trigger: GAAGATGTCCAGGCTTTGGTGAGCGGAAAGCTTGCACTTCGGTATGCAGGGAGGCAGGCCCTGACAGACTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148895.9 |
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| CDS GCA 72 bp | CAAATGTGTGCTGATGATTGGGTCATCCCGGAGCTCTaGCCTGTAGTCTGTCAGGGCCTGCCTCCCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: QMCADDWVIPEL*PVVCQGLPPCI Trigger: TATGCAGGGAGGCAGGCCCTGACAGACTACAGGGCAGAGCTCCGGGATGACCCAATCATCAGCACACATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148895.9 |
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| CDS TCA 72 bp | TTTCCACGTCGGCCTGGACTCGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTTCCAGTAAGTTATCGT | + |
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Preference number: 6 (lower is better) Translates to: FPRRPGLGKKAR*PGSDSVPVSYR Trigger: ACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGGCCGACGTGGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129500.8 |
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| CDS TCA 72 bp | GGAAGGTTCTCACCTGGACTCGGGAAAAAGGCTCGATaGCCCGGATCAGATTCTGTTCCAGTAAGTTATCGT | + |
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Preference number: 6 (lower is better) Translates to: GRFSPGLGKKAR*PGSDSVPVSYR Trigger: ACGATAACTTACTGGAACAGAATCTGATCCGGGTCATCGAGCCTTTTTCCCGAGTCCAGGTGAGAACCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125591.3 |
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| CDS CAA 90 bp | AGCCTTGCCTCCAATGCTTGGCGTAAGAAAGTTCTTTTCTCTGATTaGGCCCATTCGATGCACTCTAAACATAGCTCGACCAGCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SLASNAWRKKVLFSD*AHSMHSKHSSTSSL Trigger: CAAGCTGCTGGTCGAGCTATGTTTAGAGTGCATCGAATGGGCCAAATCAGAGAAAAGAACTTTCTTACGCCAAGCATTGGAGGCAAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174743.8 |
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