Pregenerated sensors for PSMD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026229Ensembl transcript IDs: ENSMUST00000027432.9, ENSMUST00000139715.8
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGGTCCTTGGGCTCTGGACTCGCATCTGGTGTCTTCCCAGCCACTaGACTGGCTGTCTTCTCCTCCGTCTCCATGGGGTCACTGTCTTT | + |
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Preference number: 1 (lower is better) Translates to: LVLGLWTRIWCLPSH*TGCLLLRLHGVTVF Trigger: AAAGACAGTGACCCCATGGAGACGGAGGAGAAGACAGCCAGTGCAGTGGCTGGGAAGACACCAGATGCGAGTCCAGAGCCCAAGGACCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | ACTGGCTGTCTTCTCCTCCGTCTCCATGGGGTCACTGTCTTTCTCTaGTCCTGGCACAGTCCCCGTATTGGTAGATCCAGGCACAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: TGCLLLRLHGVTVFL*SWHSPRIGRSRHRS Trigger: GCTTCTGTGCCTGGATCTACCAATACGGGGACTGTGCCAGGATCAGAGAAAGACAGTGACCCCATGGAGACGGAGGAGAAGACAGCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR GCA 90 bp | TGCTTCCTTCTCATGGCCCTTATGGATTACACCCAAGCTGGCCGTTaGAGTAAATTTGGCCCAGTTGGTGGCTCTGGCCAACCATTCCAA | + |
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Preference number: 1 (lower is better) Translates to: CFLLMALMDYTQAGR*SKFGPVGGSGQPFQ Trigger: TTGGAATGGTTGGCCAGAGCCACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGTAATCCATAAGGGCCATGAGAAGGAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | CAGGGCCATTGCAGCTCCATAGCGCACGTGAGGGTTATAACTCTCTaGCAACAAAGAAACCACACTTGGACACTGTTCAGGCGTCCTGAA | + |
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Preference number: 1 (lower is better) Translates to: QGHCSSIAHVRVITL*QQRNHTWTLFRRPE Trigger: TTCAGGACGCCTGAACAGTGTCCAAGTGTGGTTTCTTTGTTGTCAGAGAGTTATAACCCTCACGTGCGCTATGGAGCTGCAATGGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | CACCTTTGGACACGTGATCTCAGTCTGTTGGATCATGATGAGAGCTaGAGCTATCAGAGCCCCTTGCCTCACGTAGTTCACAGGGTCGTT | + |
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Preference number: 1 (lower is better) Translates to: HLWTRDLSLLDHDES*SYQSPLPHVVHRVV Trigger: AACGACCCTGTGAACTACGTGAGGCAAGGGGCTCTGATAGCTTCAGCTCTCATCATGATCCAACAGACTGAGATCACGTGTCCAAAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR GCA 90 bp | GCCAACTGCCAGACCGCGCAGAATCTTCTCGTGTTGAGTCTCTTGTaGATAGCCAACCATATCCTCAATCGCCTGGGCATTTTTAGAACC | + |
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Preference number: 1 (lower is better) Translates to: ANCQTAQNLLVLSLL*IANHILNRLGIFRT Trigger: GGTTCTAAAAATGCCCAGGCGATTGAGGATATGGTTGGCTATGCACAAGAGACTCAACACGAGAAGATTCTGCGCGGTCTGGCAGTTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR GCA 90 bp | ATCCTGATACAGGTTTGTTTTCAGCAAATCATACACATCCTGACGTaGAGTTCCCATTGCAGCCAAACCAAGGCCCAGGCTGCCTCCATG | + |
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Preference number: 1 (lower is better) Translates to: ILIQVCFQQIIHILT*SSHCSQTKAQAASM Trigger: CATGGAGGCAGCCTGGGCCTTGGTTTGGCTGCAATGGGAACTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAACCTGTATCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR GCA 90 bp | GTTTGTTTTCAGCAAATCATACACATCCTGACGTGCAGTTCCCATTaGAGCCAAACCAAGGCCCAGGCTGCCTCCATGTCGAACAATATC | + |
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Preference number: 1 (lower is better) Translates to: VCFQQIIHILTCSSH*SQTKAQAASMSNNI Trigger: GATATTGTTCGACATGGAGGCAGCCTGGGCCTTGGTTTGGCTGCAATGGGAACTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | AGTCTCCTGGTCTCCAGAGCAATGCCAATCGCTTGCTTATACTTGTaGTCATCGAGACATCGCTGGAACATTTTATTCACGATGCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: SLLVSRAMPIACLYL*SSRHRWNILFTMPS Trigger: GGAAGGCATCGTGAATAAAATGTTCCAGCGATGTCTCGATGATCACAAGTATAAGCAAGCGATTGGCATTGCTCTGGAGACCAGGAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | CACACTTGGACACTGTTCAGGCGTCCTGAACAAAATGAAGCCAAGTaGCTCCACTGCTGCTCTTCTGACATCATCATTGACATCACTTAC | + |
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Preference number: 1 (lower is better) Translates to: HTWTLFRRPEQNEAK*LHCCSSDIIIDITY Trigger: GTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTTCATTTTGTTCAGGACGCCTGAACAGTGTCCAAGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CCA 90 bp | GATCCAGGCACAGAAGCAATAGGGGTACCAACAGTTCGAAGATTCTaGATGACAGATGACAAGAACTGCTGGCTAGCACTTTCGTACAAA | + |
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Preference number: 1 (lower is better) Translates to: DPGTEAIGVPTVRRF*MTDDKNCWLALSYK Trigger: TTTGTACGAAAGTGCTAGCCAGCAGTTCTTGTCATCTGTCATCCAGAATCTTCGAACTGTTGGTACCCCTATTGCTTCTGTGCCTGGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | AGAAGCAATAGGGGTACCAACAGTTCGAAGATTCTGGATGACAGATaGCAAGAACTGCTGGCTAGCACTTTCGTACAAATCAAAACAAAT | + |
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Preference number: 1 (lower is better) Translates to: RSNRGTNSSKILDDR*QELLASTFVQIKTN Trigger: ATTTGTTTTGATTTGTACGAAAGTGCTAGCCAGCAGTTCTTGTCATCTGTCATCCAGAATCTTCGAACTGTTGGTACCCCTATTGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | GTTATCTCTAAGAAACTGGTCACTGGTAGTACCACAGTGCATGAATaGGTTTGCTATTACAGTTGCTGTATGACACACAGAATTTCGTAC | + |
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Preference number: 1 (lower is better) Translates to: VISKKLVTGSTTVHE*VCYYSCCMTHRISY Trigger: GTACGAAATTCTGTGTGTCATACAGCAACTGTAATAGCAAACTCATTCATGCACTGTGGTACTACCAGTGACCAGTTTCTTAGAGATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR TCA 90 bp | GTAGTACCACAGTGCATGAATGAGTTTGCTATTACAGTTGCTGTATaGCACACAGAATTTCGTACTGCATCCTTTGTGTTTTTCAGAATC | + |
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Preference number: 1 (lower is better) Translates to: VVPQCMNEFAITVAV*HTEFRTASFVFFRI Trigger: GATTCTGAAAAACACAAAGGATGCAGTACGAAATTCTGTGTGTCATACAGCAACTGTAATAGCAAACTCATTCATGCACTGTGGTACTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CAA 90 bp | TTGCTTCCTTGTTTCCTGTACCAGCACAGCAGATTCCCAGGGCCATaGCAGCTCCATAGCGCACGTGAGGGTTATAACTCTCTGACAACA | + |
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Preference number: 2 (lower is better) Translates to: LLPCFLYQHSRFPGP*QLHSAREGYNSLTT Trigger: TGTTGTCAGAGAGTTATAACCCTCACGTGCGCTATGGAGCTGCAATGGCCCTGGGAATCTGCTGTGCTGGTACAGGAAACAAGGAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGCGCTGTCTTCCCAGCCACTaGACTGGCTGTCTTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AALLTSSLTSLTATCSRRCLPSH*TGCLLL Trigger: GAGGAGAAGACAGCCAGTGCAGTGGCTGGGAAGACA...GCGCCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCAGAATCTTCTCGTGTTGAGTCTCTTGTGCATAGCCAACCATATCCTCAATCTCTGGACTCGCATCTaGTGTCTTCCCAGCCACTGC | + |
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Preference number: 2 (lower is better) Translates to: AQNLLVLSLLCIANHILNLWTRI*CLPSHC Trigger: GCAGTGGCTGGGAAGACACCAGATGCGAGTCCAGAG...ATTGAGGATATGGTTGGCTATGCACAAGAGACTCAACACGAGAAGATTCTGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CAA 90 bp | TCATGGCCCTTATGGATTACACCCAAGCTGGCCGTTGCAGTAAATTaGGCCCAGTTGGTGGCTCTGGCCAACCATTCCAAGTTATCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SWPLWITPKLAVAVN*AQLVALANHSKLSL Trigger: TAGAGATAACTTGGAATGGTTGGCCAGAGCCACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGTAATCCATAAGGGCCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGCGCCCCTTCCTGATAGGCTaGTCCTGGAGAAGTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: AALLTSSLTSLTATCSRRPFLIG*SWRSVL Trigger: AAGGACACTTCTCCAGGATCAGCCTATCAGGAAGGG...GCGCCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CAA 90 bp | GGTTTGTTTTCAGCAAATCATACACATCCTGACGTGCAGTTCCCATaGCAGCCAAACCAAGGCCCAGGCTGCCTCCATGTCGAACAATAT | + |
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Preference number: 2 (lower is better) Translates to: GLFSANHTHPDVQFP*QPNQGPGCLHVEQY Trigger: ATATTGTTCGACATGGAGGCAGCCTGGGCCTTGGTTTGGCTGCAATGGGAACTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CAA 90 bp | AATGCCAACTGCCAGACCGCGCAGAATCTTCTCGTGTTGAGTCTCTaGTGCATAGCCAACCATATCCTCAATCGCCTGGGCATTTTTAGA | + |
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Preference number: 2 (lower is better) Translates to: NANCQTAQNLLVLSL*CIANHILNRLGIFR Trigger: TCTAAAAATGCCCAGGCGATTGAGGATATGGTTGGCTATGCACAAGAGACTCAACACGAGAAGATTCTGCGCGGTCTGGCAGTTGGCATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAATTGGGTCCTTGTCACGACAGAGAGACTCAATGAGAGCATCAGCCTCCTCGCTTGCTTATACTTGTaGTCATCGAGACATCGCTGG | + |
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Preference number: 2 (lower is better) Translates to: KNWVLVTTERLNESISLLACLYL*SSRHRW Trigger: CCAGCGATGTCTCGATGATCACAAGTATAAGCAAGC...GAGGAGGCTGATGCTCTCATTGAGTCTCTCTGTCGTGACAAGGACCCAATTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | GGTACTTCCAGAGGGGCAGGATATGCGAATGTGGATGGTTTACAATTTGATTTAACCACAGACGGCATATaGGTGTGCCCAGTCCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: GTSRGAGYANVDGLQFDLTTDGI*VCPVLD Trigger: GTCCAGGACTGGGCACACTCATATGCCGTCTGTGGT...TAAATCAAATTGTAAACCATCCACATTCGCATATCCTGCCCCTCTGGAAGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTGAACAAAATGAAGCCAAGTGACTCCACTGCTGCTCTTCTGACATCATCAGTAGCAGGCGCCGAATaGCTTTGTTGTTACCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: VLNKMKPSDSTAALLTSSVAGAE*LCCYQS Trigger: GCTCTGGTAACAACAAAGCCATTCGGCGCCTGCTAC...TGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTTCATTTTGTTCAGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CAA 90 bp | TTCACAGGGTCGTTGGTCATTGGCTCTAGTAAATTAATTGCTTCCTaGTTTCCTGTACCAGCACAGCAGATTCCCAGGGCCATTGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: FTGSLVIGSSKLIAS*FPVPAQQIPRAIAA Trigger: AGCTGCAATGGCCCTGGGAATCTGCTGTGCTGGTACAGGAAACAAGGAAGCAATTAATTTACTAGAGCCAATGACCAACGACCCTGTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATTAAGGAGATAGTCAATTATGTCACCACCATGATTGGCATGAATGAGACCTCCCAGCCACTGCACTaGCTGTCTTCTCCTCCGTCT | + |
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Preference number: 2 (lower is better) Translates to: LIKEIVNYVTTMIGMNETSQPLH*LSSPPS Trigger: AGACGGAGGAGAAGACAGCCAGTGCAGTGGCTGGGA...GGTCTCATTCATGCCAATCATGGTGGTGACATAATTGACTATCTCCTTAATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAATTGGGTCCTTGTCACGACAGAGAGACTCAATGAGAGCATCAGCCTCCTCACCACAGTGCATGAATaGGTTTGCTATTACAGTTGC | + |
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Preference number: 2 (lower is better) Translates to: KNWVLVTTERLNESISLLTTVHE*VCYYSC Trigger: GCAACTGTAATAGCAAACTCATTCATGCACTGTGGT...GAGGAGGCTGATGCTCTCATTGAGTCTCTCTGTCGTGACAAGGACCCAATTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGAGACATCCAGTCTCCTaGTCTCCAGAGCAATGCCAA | + |
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Preference number: 2 (lower is better) Translates to: TAALLTSSLTSLTATCSRRHPVS*SPEQCQ Trigger: TTGGCATTGCTCTGGAGACCAGGAGACTGGATGTCT...CCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATTAAGGAGATAGTCAATTATGTCACCACCATGATTGGCATGAATGAGACCTCAGTGTCTGGTCCTTaGGCTCTGGACTCGCATCTG | + |
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Preference number: 2 (lower is better) Translates to: LIKEIVNYVTTMIGMNETSVSGP*ALDSHL Trigger: CAGATGCGAGTCCAGAGCCCAAGGACCAGACACTGA...GGTCTCATTCATGCCAATCATGGTGGTGACATAATTGACTATCTCCTTAATCAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGCCCAGTTGGTGGCTCTaGCCAACCATTCCAAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: TAALLTSSLTSLTATCSRPSWWL*PTIPSY Trigger: ATAACTTGGAATGGTTGGCCAGAGCCACCAACTGGG...CCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTGTTTTCAGCAAATCATACACATCCTGACGTGCAGTTCCCATTGCAGCCAACAGATGACAAGAACTaGTGGCTAGCACTTTCGTAC | + |
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Preference number: 2 (lower is better) Translates to: GLFSANHTHPDVQFPLQPTDDKN*WLALSY Trigger: GTACGAAAGTGCTAGCCAGCAGTTCTTGTCATCTGT...TGGCTGCAATGGGAACTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR GCA 90 bp | CCCTTATGGATTACACCCAAGCTGGCCGTTGCAGTAAATTTGGCCCAGTTGGTGCACAGAATTTCGTACTaGATCCTTTGTGTTTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PLWITPKLAVAVNLAQLVHRISY*ILCVFQ Trigger: CTGAAAAACACAAAGGATGCAGTACGAAATTCTGTG...CACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGTAATCCATAAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAATTGGGTCCTTGTCACGACAGAGAGACTCAATGAGAGCATCAGCCTCCTCACAGTTCGAAGATTCTaGATGACAGATGACAAGAAC | + |
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Preference number: 2 (lower is better) Translates to: KNWVLVTTERLNESISLLTVRRF*MTDDKN Trigger: GTTCTTGTCATCTGTCATCCAGAATCTTCGAACTGT...GAGGAGGCTGATGCTCTCATTGAGTCTCTCTGTCGTGACAAGGACCCAATTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CAA 90 bp | CTCAAAGACATCCAGTCTCCTGGTCTCCAGAGCAATGCCAATCGCTaGCTTATACTTGTGATCATCGAGACATCGCTGGAACATTTTATT | + |
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Preference number: 2 (lower is better) Translates to: LKDIQSPGLQSNANR*LILVIIETSLEHFI Trigger: AATAAAATGTTCCAGCGATGTCTCGATGATCACAAGTATAAGCAAGCGATTGGCATTGCTCTGGAGACCAGGAGACTGGATGTCTTTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATGACATCATCATGTTTGTCATTGATGACTTTGGAATACAGCTGCCGGAACAAGACATGCAGAGTTTaGGGCTGTAAGCTAGCATTC | + |
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Preference number: 2 (lower is better) Translates to: AMTSSCLSLMTLEYSCRNKTCRV*GCKLAF Trigger: GAATGCTAGCTTACAGCCTCAAACTCTGCATGTCTT...GTTCCGGCAGCTGTATTCCAAAGTCATCAATGACAAACATGATGATGTCATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAAGTGACTCCACTGCTGCTCTTCTGACATCATCATTGACATCACTTACACATGATTGGCATGAATaGGACCCAATGCATAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: KPSDSTAALLTSSLTSLTHDWHE*DPMHRD Trigger: GTCTCTATGCATTGGGTCTCATTCATGCCAATCATG...TGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATGACATCATCATGTTTGTCATTGATGACTTTGGAATACAGCTGCCGGAACTGGTCTCCAGAGCAATaGCAATCGCTTGCTTATACT | + |
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Preference number: 2 (lower is better) Translates to: AMTSSCLSLMTLEYSCRNWSPEQ*QSLAYT Trigger: AGTATAAGCAAGCGATTGGCATTGCTCTGGAGACCA...GTTCCGGCAGCTGTATTCCAAAGTCATCAATGACAAACATGATGATGTCATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | TTAATTGCTTCCTTGTTTCCTGTACCAGCACAGCAGATTCCCAGGGCCATTGCAATATCACTCACAGCCTaGGGATCATCTAAGAAAATT | + |
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Preference number: 2 (lower is better) Translates to: LIASLFPVPAQQIPRAIAISLTA*GSSKKI Trigger: AATTTTCTTAGATGATCCTCAGGCTGTGAGTGATAT...TGCAATGGCCCTGGGAATCTGCTGTGCTGGTACAGGAAACAAGGAAGCAATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | GGTACTTCCAGAGGGGCAGGATATGCGAATGTGGATGGTTTACAATTTGATTTAAAATCATACACATCCTaGCGTGCAGTTCCCATTGCA | + |
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Preference number: 2 (lower is better) Translates to: GTSRGAGYANVDGLQFDLKSYTS*RAVPIA Trigger: TGCAATGGGAACTGCACGTCAGGATGTGTATGATTT...TAAATCAAATTGTAAACCATCCACATTCGCATATCCTGCCCCTCTGGAAGTACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | GCGCAGAATCTTCTCGTGTTGAGTCTCTTGTGCATAGCCAACCATATCCTCAATTTATCTCTAAGAAACTaGTCACTGGTAGTACCACAG | + |
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Preference number: 2 (lower is better) Translates to: AQNLLVLSLLCIANHILNLSLRN*SLVVPQ Trigger: CTGTGGTACTACCAGTGACCAGTTTCTTAGAGATAA...ATTGAGGATATGGTTGGCTATGCACAAGAGACTCAACACGAGAAGATTCTGCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGAGATCTTCTAAGAATTaGGTCCTTGTCACGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: TAALLTSSLTSLTATCSRRSSKN*VLVTTE Trigger: CTCTGTCGTGACAAGGACCCAATTCTTAGAAGATCT...CCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | GCCATGACATCATCATGTTTGTCATTGATGACTTTGGAATACAGCTGCCGGAACAGGGTTATAACTCTCTaGCAACAAAGAAACCACACT | + |
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Preference number: 2 (lower is better) Translates to: AMTSSCLSLMTLEYSCRNRVITL*QQRNHT Trigger: AGTGTGGTTTCTTTGTTGTCAGAGAGTTATAACCCT...GTTCCGGCAGCTGTATTCCAAAGTCATCAATGACAAACATGATGATGTCATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGCGCGTTTGCTATTACAGTTaGTGTATGACACACAGAATT | + |
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Preference number: 2 (lower is better) Translates to: AALLTSSLTSLTATCSRRVCYYS*CMTHRI Trigger: AATTCTGTGTGTCATACAGCAACTGTAATAGCAAAC...GCGCCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGTTTTCAGCAAATCATACACATCCTGACGTGCAGTTCCCATTGCAGCCAATCATCGAGACATCGCTaGAACATTTTATTCACGATG | + |
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Preference number: 2 (lower is better) Translates to: VCFQQIIHILTCSSHCSQSSRHR*NILFTM Trigger: CATCGTGAATAAAATGTTCCAGCGATGTCTCGATGA...TTGGCTGCAATGGGAACTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR CCA 90 bp | CTGATTAAGGAGATAGTCAATTATGTCACCACCATGATTGGCATGAATGAGACCGATGACAAGAACTGCTaGCTAGCACTTTCGTACAAA | + |
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Preference number: 2 (lower is better) Translates to: LIKEIVNYVTTMIGMNETDDKNC*LALSYK Trigger: TTTGTACGAAAGTGCTAGCCAGCAGTTCTTGTCATC...GGTCTCATTCATGCCAATCATGGTGGTGACATAATTGACTATCTCCTTAATCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR-3UTR TCA 90 bp | GGTACTTCCAGAGGGGCAGGATATGCGAATGTGGATGGTTTACAATTTGATTTAATTACAGTTGCTGTATaGCACACAGAATTTCGTACT | + |
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Preference number: 2 (lower is better) Translates to: GTSRGAGYANVDGLQFDLITVAV*HTEFRT Trigger: AGTACGAAATTCTGTGTGTCATACAGCAACTGTAAT...TAAATCAAATTGTAAACCATCCACATTCGCATATCCTGCCCCTCTGGAAGTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| 3UTR CCA 72 bp | CAGCCACTGCACTGGCTGTCTTCTCCTCCGTCTCCATaGGGTCACTGTCTTTCTCTGATCCTGGCACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: QPLHWLSSPPSP*GHCLSLILAQS Trigger: GGACTGTGCCAGGATCAGAGAAAGACAGTGACCCCATGGAGACGGAGGAGAAGACAGCCAGTGCAGTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | CTTCTCCTCCGTCTCCATGGGGTCACTGTCTTTCTCTaGTCCTGGCACAGTCCCCGTATTGGTAGATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LLLRLHGVTVFL*SWHSPRIGRSR Trigger: CCTGGATCTACCAATACGGGGACTGTGCCAGGATCAGAGAAAGACAGTGACCCCATGGAGACGGAGGAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR GCA 72 bp | CAGCCTCCTCCATCCTCCCGTACATCACTAACGCAATaGCAACTGCCAGACCGCGCAGAATCTTCTCGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QPPPSSRTSLTQ*QLPDRAESSRV Trigger: AACACGAGAAGATTCTGCGCGGTCTGGCAGTTGGCATTGCGTTAGTGATGTACGGGAGGATGGAGGAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | TGGGTGAAGACAAGGACGCCAACCACAGACGGCATATaGGTGTGCCCAGTCCTGGACTGTAAGGAGATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WVKTRTPTTDGI*VCPVLDCKEIV Trigger: CACAATCTCCTTACAGTCCAGGACTGGGCACACTCATATGCCGTCTGTGGTTGGCGTCCTTGTCTTCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR GCA 72 bp | CTCATGGCCCTTATGGATTACACCCAAGCTGGCCGTTaGAGTAAATTTGGCCCAGTTGGTGGCTCTGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: LMALMDYTQAGR*SKFGPVGGSGQ Trigger: TTGGCCAGAGCCACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGTAATCCATAAGGGCCATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | ACCCAATGCATAGAGACCGCCCCCTTCCTGATAGGCTaGTCCTGGAGAAGTGTCCTTAGGAAGGTATGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: TQCIETAPFLIG*SWRSVLRKVCC Trigger: GCAACATACCTTCCTAAGGACACTTCTCCAGGATCAGCCTATCAGGAAGGGGGCGGTCTCTATGCATTGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGAACAAAATGAAGCCAAGTGACTCCACTGCTGCTCTTCTGACATCATCAGACGTGCAGTTCCCATaGCAGCCAAACCAAGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: VLNKMKPSDSTAALLTSSDVQFP*QPNQGP Trigger: TGGGCCTTGGTTTGGCTGCAATGGGAACTGCACGTC...TGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTTCATTTTGTTCAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | ACACGTGATCTCAGTCTGTTGGATCATGATGAGAGCTaGAGCTATCAGAGCCCCTTGCCTCACGTAGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TRDLSLLDHDES*SYQSPLPHVVH Trigger: GTGAACTACGTGAGGCAAGGGGCTCTGATAGCTTCAGCTCTCATCATGATCCAACAGACTGAGATCACGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | TATGAGTGTGCCCAGTCCTGGACTGTAAGGAGATTGTaGCATTATGACCACCTGCATCCAGTATGCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YECAQSWTVRRL*HYDHLHPVCLG Trigger: CCCAAGGCATACTGGATGCAGGTGGTCATAATGTCACAATCTCCTTACAGTCCAGGACTGGGCACACTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR GCA 72 bp | CAGGTTTGTTTTCAGCAAATCATACACATCCTGACGTaGAGTTCCCATTGCAGCCAAACCAAGGCCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QVCFQQIIHILT*SSHCSQTKAQA Trigger: AGCCTGGGCCTTGGTTTGGCTGCAATGGGAACTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CCA 72 bp | AATCTTAATCATTTTCAGTGTCTGGTCCTTGGGCTCTaGACTCGCATCTGGTGTCTTCCCAGCCACTGCACT | + |
|
Preference number: 3 (lower is better) Translates to: NLNHFQCLVLGL*TRIWCLPSHCT Trigger: AGTGCAGTGGCTGGGAAGACACCAGATGCGAGTCCAGAGCCCAAGGACCAGACACTGAAAATGATTAAGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCTGCTCTTCTGACATCATCATTGACATCACTTACAGCAACATGTAGCAGGGCCGTTGCAGTAAATTaGGCCCAGTTGGTGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TAALLTSSLTSLTATCSRAVAVN*AQLVAL Trigger: CAGAGCCACCAACTGGGCCAAATTTACTGCAACGGC...CCTGCTACATGTTGCTGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCTGAACAAAATGAAGCCAAGTGACTCCACTGCTGCTCTTCTGACATCATCACAGAATCTTCTCGTGTaGAGTCTCTTGTGCATAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLNKMKPSDSTAALLTSSQNLLV*SLLCIA Trigger: GGCTATGCACAAGAGACTCAACACGAGAAGATTCTG...TGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTTCATTTTGTTCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | GATAGTCAATTATGTCACCACCATGATTGGCATGAATaGGACCCAATGCATAGAGACCGCCCCCTTCCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: DSQLCHHHDWHE*DPMHRDRPLPD Trigger: ATCAGGAAGGGGGCGGTCTCTATGCATTGGGTCTCATTCATGCCAATCATGGTGGTGACATAATTGACTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | ACACTGTTCAGGCGTCCTGAACAAAATGAAGCCAAGTaGCTCCACTGCTGCTCTTCTGACATCATCATTGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLFRRPEQNEAK*LHCCSSDIIID Trigger: GTCAATGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTTCATTTTGTTCAGGACGCCTGAACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR GCA 72 bp | TCTCAAAGACATCCAGTCTCCTGGTCTCCAGAGCAATaGCAATCGCTTGCTTATACTTGTGATCATCGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SQRHPVSWSPEQ*QSLAYTCDHRD Trigger: GTCTCGATGATCACAAGTATAAGCAAGCGATTGGCATTGCTCTGGAGACCAGGAGACTGGATGTCTTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGATTAAGGAGATAGTCAATTATGTCACCACCATGATTGGCATGAATGAGACCGTAAATTTGGCCCAGTaGGTGGCTCTGGCCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: LIKEIVNYVTTMIGMNETVNLAQ*VALANH Trigger: ATGGTTGGCCAGAGCCACCAACTGGGCCAAATTTAC...GGTCTCATTCATGCCAATCATGGTGGTGACATAATTGACTATCTCCTTAATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CCA 72 bp | ACAGAAGCAATAGGGGTACCAACAGTTCGAAGATTCTaGATGACAGATGACAAGAACTGCTGGCTAGCACTT | + |
|
Preference number: 3 (lower is better) Translates to: TEAIGVPTVRRF*MTDDKNCWLAL Trigger: AAGTGCTAGCCAGCAGTTCTTGTCATCTGTCATCCAGAATCTTCGAACTGTTGGTACCCCTATTGCTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGCAGAATCTTCTCGTGTTGAGTCTCTTGTGCATAGCCAACCATATCCTCAATAGCAATGCCAATCGCTaGCTTATACTTGTGATCATC | + |
|
Preference number: 3 (lower is better) Translates to: AQNLLVLSLLCIANHILNSNANR*LILVII Trigger: GATGATCACAAGTATAAGCAAGCGATTGGCATTGCT...ATTGAGGATATGGTTGGCTATGCACAAGAGACTCAACACGAGAAGATTCTGCGC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAATTGGGTCCTTGTCACGACAGAGAGACTCAATGAGAGCATCAGCCTCCTCCATCCTGATACAGGTTaGTTTTCAGCAAATCATACA | + |
|
Preference number: 3 (lower is better) Translates to: KNWVLVTTERLNESISLLHPDTG*FSANHT Trigger: TGTATGATTTGCTGAAAACAAACCTGTATCAGGATG...GAGGAGGCTGATGCTCTCATTGAGTCTCTCTGTCGTGACAAGGACCCAATTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | GTCTCCAGAGCAATGCCAATCGCTTGCTTATACTTGTaGTCATCGAGACATCGCTGGAACATTTTATTCACG | + |
|
Preference number: 3 (lower is better) Translates to: VSRAMPIACLYL*SSRHRWNILFT Trigger: CGTGAATAAAATGTTCCAGCGATGTCTCGATGATCACAAGTATAAGCAAGCGATTGGCATTGCTCTGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTACTTCCAGAGGGGCAGGATATGCGAATGTGGATGGTTTACAATTTGATTTAAGAATAGCGCCAAATTaGGCCATGACATCATCATGT | + |
|
Preference number: 3 (lower is better) Translates to: GTSRGAGYANVDGLQFDLRIAPN*AMTSSC Trigger: ACATGATGATGTCATGGCCAAATTTGGCGCTATTCT...TAAATCAAATTGTAAACCATCCACATTCGCATATCCTGCCCCTCTGGAAGTACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR GCA 72 bp | ACAGTTCGAAGATTCTGGATGACAGATGACAAGAACTaGTGGCTAGCACTTTCGTACAAATCAAAACAAATC | + |
|
Preference number: 3 (lower is better) Translates to: TVRRFWMTDDKN*WLALSYKSKQI Trigger: GATTTGTTTTGATTTGTACGAAAGTGCTAGCCAGCAGTTCTTGTCATCTGTCATCCAGAATCTTCGAACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR TCA 72 bp | AATTTCGTACTGCATCCTTTGTGTTTTTCAGAATCATaGGGTCTGTGTTATTATTTCGTATTAGGAACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: NFVLHPLCFSES*GLCYYFVLGTA Trigger: TGCAGTTCCTAATACGAAATAATAACACAGACCTCATGATTCTGAAAAACACAAAGGATGCAGTACGAAATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCCATACTCGAACGGCTCTaGGGGCTCTGGCTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FQCAPGQSSSAGQAGSLAILERL*GLWLLL Trigger: GAGCAAGAGCCAGAGCCCCCAGAGCCGTTCGAGTAT...GGCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | TCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGCGAGGCCACCAGGGCTaGAAACTGCCGACTTCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLTTFQCAPGQSSSAGQARGHQG*KLPTSE Trigger: TTCCGAAGTCGGCAGTTTGCAGCCCTGGTGGCCTCG...CGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTCCCAGCCACTGCACTaGCTGTCTTCTCCTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHFSVRQDSLLQLGRRDPSQPLH*LSSPPS Trigger: AGACGGAGGAGAAGACAGCCAGTGCAGTGGCTGGGA...GGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGCTCTGGACTCGCATCTaGTGTCTTCCCAGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRLWTRI*CLPSHC Trigger: GCAGTGGCTGGGAAGACACCAGATGCGAGTCCAGAG...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | ACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGACCACAGACGGCATATaGGTGTGCCCAGTCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TFQCAPGQSSSAGQAGSLTTDGI*VCPVLD Trigger: GTCCAGGACTGGGCACACTCATATGCCGTCTGTGGT...CAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCCAGAACCAGAACTGGGTaGAGACAAGGACGCCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: FQCAPGQSSSAGQAGSLARTRTG*RQGRQP Trigger: TGGTTGGCGTCCTTGTCTTCACCCAGTTCTGGTTCT...GGCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGTGTCTTCCCAGCCACTaGACTGGCTGTCTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRCLPSH*TGCLLL Trigger: GAGGAGAAGACAGCCAGTGCAGTGGCTGGGAAGACA...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCCGTAGCAGGCGCCGAATaGCTTTGTTGTTACCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQCAPGQSSSAGQAGSLAVAGAE*LCCYQS Trigger: GCTCTGGTAACAACAAAGCCATTCGGCGCCTGCTAC...GGCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCCGGCTCTGGGGGCTCTaGCTCTTGCTCTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGRLWGL*LLLFLF Trigger: GAAGAGGAAGAGCAAGAGCCAGAGCCCCCAGAGCCG...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGTCACTGTCTTTCTCTaGTCCTGGCACAGTCCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SLTTFQCAPGQSSSAGQAVTVFL*SWHSPR Trigger: ACGGGGACTGTGCCAGGATCAGAGAAAGACAGTGAC...CGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | CCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGCCCTTCCTGATAGGCTaGTCCTGGAGAAGTGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PHDISVCARTVFFSWAGGPFLIG*SWRSVL Trigger: AAGGACACTTCTCCAGGATCAGCCTATCAGGAAGGG...CCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCCGGCAGGCATAACTCGTaGTGGATTATCCAACAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FQCAPGQSSSAGQAGSLAGRHNS*WIIQQL Trigger: CAGCTGTTGGATAATCCAGCACGAGTTATGCCTGCC...GGCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGTACAGCTGCCGGAACTaGTTCACCTTTGGACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTTFQCAPGQSSSAGQAYSCRN*FTFGHV Trigger: CACGTGTCCAAAGGTGAATCAGTTCCGGCAGCTGTA...CGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGAGACATCCAGTCTCCTaGTCTCCAGAGCAATGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRRHPVS*SPEQCQ Trigger: TTGGCATTGCTCTGGAGACCAGGAGACTGGATGTCT...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCTCAGTGTCTGGTCCTTaGGCTCTGGACTCGCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGSVSGP*ALDSHL Trigger: CAGATGCGAGTCCAGAGCCCAAGGACCAGACACTGA...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCGCCCCCGATGGAGAGTaGTTTAAAAGGCTGGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: RHFSVRQDSLLQLGRRDPAPDGE*FKRLVS Trigger: AGATACCAGCCTTTTAAACCACTCTCCATCGGGGGC...GGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGTTCCTCTTCAATCTTTaGGCCGTGTGCTGCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSLTTFQCAPGQSSSAGQFLFNL*AVCCHG Trigger: CCCGTGGCAGCACACGGCCCAAAGATTGAAGAGGAA...CTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATGACAGAGAGACTCAATaGGAGCATCAGCCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDDRETQ*EHQPPP Trigger: TGGAGGAGGCTGATGCTCTCATTGAGTCTCTCTGTC...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | GACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGATCATGATGAGAGCTaGAGCTATCAGAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DISVCARTVFFSWAGGIPDHDES*SYQSPL Trigger: CAAGGGGCTCTGATAGCTTCAGCTCTCATCATGATC...AGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCTGTCTTTCAGAATTATaGTGCCCCCGATGGAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ISVCARTVFFSWAGGIPGCLSEL*CPRWRV Trigger: CACTCTCCATCGGGGGCATCATAATTCTGAAAGACA...GCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | GGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGACCAGGGCTGCAAACTaGCGACTTCGGAAACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLTTFQCAPGQSSSAGQTRAAN*RLRKPS Trigger: TGAAGGTTTCCGAAGTCGGCAGTTTGCAGCCCTGGT...CTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCTTCTCATGGCCCTTATaGATTACACCCAAGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: HDISVCARTVFFSWAGGIFSWPL*ITPKLA Trigger: GGCCAGCTTGGGTGTAATCCATAAGGGCCATGAGAA...GATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGAAGACATGCAGAGTTTaGGGCTGTAAGCTAGCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRKTCRV*GCKLAF Trigger: GAATGCTAGCTTACAGCCTCAAACTCTGCATGTCTT...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | ACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCTCACCTTTGGACACGTaGTCTCAGTCTGTTGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TTFQCAPGQSSSAGQAGSSPLDT*SQSVGS Trigger: TGATCCAACAGACTGAGATCACGTGTCCAAAGGTGA...GGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | ATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCGTTGAAGAGGTCACCTaGTCCAAGAGCATAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ISVCARTVFFSWAGGIPGVEEVT*SKSIIQ Trigger: CTGAATTATGCTCTTGGAGCAGGTGACCTCTTCAAC...GCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGGGGCTCTGGCTCTTaGTCTTCCTCTTCAATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPHDISVCARTVFFSWAGGSGS*SSSSIF Trigger: AAAGATTGAAGAGGAAGAGCAAGAGCCAGAGCCCCC...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCAGTTGGTGGCTCTaGCCAACCATTCCAAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDPSWWL*PTIPSY Trigger: ATAACTTGGAATGGTTGGCCAGAGCCACCAACTGGG...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | GACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTAGTGCTTCCTTCTCATaGCCCTTATGGATTACACCC | + |
|
Preference number: 4 (lower is better) Translates to: DISVCARTVFFSWAGGIPSASFS*PLWITP Trigger: GGGTGTAATCCATAAGGGCCATGAGAAGGAAGCACT...AGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | GTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGGCATCCAGTATGCCTTaGGCCAGAATAGCGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPSRHFSVRQDSLLQLGRASSMP*ARIAPN Trigger: ATTTGGCGCTATTCTGGCCCAAGGCATACTGGATGC...CCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAACCAGAACCAGAACTaGGTGAAGACAAGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGNQNQN*VKTRTP Trigger: TGGCGTCCTTGTCTTCACCCAGTTCTGGTTCTGGTT...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGAGGCATAACTCGTGCTaGATTATCCAACAGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRRHNSC*IIQQLE Trigger: TTCCAGCTGTTGGATAATCCAGCACGAGTTATGCCT...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCTTAAGACCTTCAGCTaGGCAGGCATAACTCGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDLKTFS*AGITRA Trigger: AGCACGAGTTATGCCTGCCCAGCTGAAGGTCTTAAG...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGCTTGCTTATACTTGTaGTCATCGAGACATCGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPHDISVCARTVFFSWAGACLYL*SSRHRW Trigger: CCAGCGATGTCTCGATGATCACAAGTATAAGCAAGC...GCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCAAAATGAAGCCAAGTaGCTCCACTGCTGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDQNEAK*LHCCSS Trigger: AGAAGAGCAGCAGTGGAGTCACTTGGCTTCATTTTG...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | CATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGACTGTAAGGAGATTGTaGCATTATGACCACCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HFSVRQDSLLQLGRRDPWTVRRL*HYDHLH Trigger: ATGCAGGTGGTCATAATGTCACAATCTCCTTACAGT...CCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | ACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGTGGTCTCCAGAGCAATaGCAATCGCTTGCTTATACT | + |
|
Preference number: 4 (lower is better) Translates to: TFQCAPGQSSSAGQAGSLWSPEQ*QSLAYT Trigger: AGTATAAGCAAGCGATTGGCATTGCTCTGGAGACCA...CAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATGACAAGAACTGCTaGCTAGCACTTTCGTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRDDKNC*LALSYK Trigger: TTTGTACGAAAGTGCTAGCCAGCAGTTCTTGTCATC...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCCTTATCTCTAAGAAACTaGTCACTGGTAGTACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FQCAPGQSSSAGQAGSLALSLRN*SLVVPQ Trigger: CTGTGGTACTACCAGTGACCAGTTTCTTAGAGATAA...GGCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCCAAAGAAACCACACTTaGACACTGTTCAGGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FPHDISVCARTVFFSWAGQRNHT*TLFRRP Trigger: AGGACGCCTGAACAGTGTCCAAGTGTGGTTTCTTTG...GCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| 3UTR CAA 72 bp | TGTTTCCTGTACCAGCACAGCAGATTCCCAGGGCCATaGCAGCTCCATAGCGCACGTGAGGGTTATAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFLYQHSRFPGP*QLHSAREGYNS Trigger: AGAGTTATAACCCTCACGTGCGCTATGGAGCTGCAATGGCCCTGGGAATCTGCTGTGCTGGTACAGGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGACCACAGTGCATGAATaGGTTTGCTATTACAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFQCAPGQSSSAGQAGSLTTVHE*VCYYSC Trigger: GCAACTGTAATAGCAAACTCATTCATGCACTGTGGT...CAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCCATGATTGGCATGAATaGGACCCAATGCATAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGHDWHE*DPMHRD Trigger: GTCTCTATGCATTGGGTCTCATTCATGCCAATCATG...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAAAATCATACACATCCTaGCGTGCAGTTCCCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GFPHDISVCARTVFFSWAKSYTS*RAVPIA Trigger: TGCAATGGGAACTGCACGTCAGGATGTGTATGATTT...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGAGGGTTATAACTCTCTaGCAACAAAGAAACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRRVITL*QQRNHT Trigger: AGTGTGGTTTCTTTGTTGTCAGAGAGTTATAACCCT...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATGAGATTGTGACATTATaGCCACCTGCATCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDEIVTL*PPASSM Trigger: CATACTGGATGCAGGTGGTCATAATGTCACAATCTC...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATACAGATGACAAGAACTaGTGGCTAGCACTTTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDTDDKN*WLALSY Trigger: GTACGAAAGTGCTAGCCAGCAGTTCTTGTCATCTGT...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGACAGTTCGAAGATTCTaGATGACAGATGACAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRTVRRF*MTDDKN Trigger: GTTCTTGTCATCTGTCATCCAGAATCTTCGAACTGT...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | GACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGATTATCCAACAGCTaGAAGTTTGGTTCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DISVCARTVFFSWAGGIPGLSNS*KFGSGS Trigger: AGAACCTGAACCAAACTTCCAGCTGTTGGATAATCC...AGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCAGTGGTTTAAAAGGCTaGTATCTGCAGGTCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPHDISVCARTVFFSWAGSGLKG*YLQVSV Trigger: GACAGAGACCTGCAGATACCAGCCTTTTAAACCACT...GCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCATATCACTCACAGCCTaGGGATCATCTAAGAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: ISVCARTVFFSWAGGIPGISLTA*GSSKKI Trigger: AATTTTCTTAGATGATCCTCAGGCTGTGAGTGATAT...GCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR TCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCGCCAAATTTGGCCATaGCATCATCATGTTTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDRQIWP*HHHVCH Trigger: ATGACAAACATGATGATGTCATGGCCAAATTTGGCG...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGAAAATTCCTTAAGCTGTaGCTCTTCTTCATCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LTTFQCAPGQSSSAGQAGKFLKL*LFFIQK Trigger: CTTCTGGATGAAGAAGAGCCACAGCTTAAGGAATTT...TCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | CTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCATCGAGACATCGCTaGAACATTTTATTCACGATG | + |
|
Preference number: 4 (lower is better) Translates to: LTTFQCAPGQSSSAGQAGSSRHR*NILFTM Trigger: CATCGTGAATAAAATGTTCCAGCGATGTCTCGATGA...TCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | GGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGAGATCTTCTAAGAATTaGGTCCTTGTCACGACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSLTTFQCAPGQSSSAGQRSSKN*VLVTTE Trigger: CTCTGTCGTGACAAGGACCCAATTCTTAGAAGATCT...CTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATAGCCACAATAAGCCATaGCTACAGTATACATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDSHNKP*LQYTFQ Trigger: CTGGAATGTATACTGTAGCCATGGCTTATTGTGGCT...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAAGTTCACAGGGTCGTTaGTCATTGGCTCTAGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GFPHDISVCARTVFFSWASSQGR*SLALVN Trigger: ATTTACTAGAGCCAATGACCAACGACCCTGTGAACT...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCGTGATCTCAGTCTGTTaGATCATGATGAGAGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGVISVC*IMMRAE Trigger: TTCAGCTCTCATCATGATCCAACAGACTGAGATCAC...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| 3UTR CAA 72 bp | TCACTGTCTTTCTCTGATCCTGGCACAGTCCCCGTATaGGTAGATCCAGGCACAGAAGCAATAGGGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSDPGTVPV*VDPGTEAIGVP Trigger: TGGTACCCCTATTGCTTCTGTGCCTGGATCTACCAATACGGGGACTGTGCCAGGATCAGAGAAAGACAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CAA 72 bp | ACACCCAAGCTGGCCGTTGCAGTAAATTTGGCCCAGTaGGTGGCTCTGGCCAACCATTCCAAGTTATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TPKLAVAVNLAQ*VALANHSKLSL Trigger: TAGAGATAACTTGGAATGGTTGGCCAGAGCCACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CAA 72 bp | TTATGGATTACACCCAAGCTGGCCGTTGCAGTAAATTaGGCCCAGTTGGTGGCTCTGGCCAACCATTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LWITPKLAVAVN*AQLVALANHSK Trigger: CTTGGAATGGTTGGCCAGAGCCACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGTAATCCATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| CDS-3UTR TCA 90 bp | TCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGATTACAGTTGCTGTATaGCACACAGAATTTCGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SLTTFQCAPGQSSSAGQAITVAV*HTEFRT Trigger: AGTACGAAATTCTGTGTGTCATACAGCAACTGTAAT...CGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCACACAGAATTTCGTACTaGATCCTTTGTGTTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GFPHDISVCARTVFFSWAHRISY*ILCVFQ Trigger: CTGAAAAACACAAAGGATGCAGTACGAAATTCTGTG...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| CDS-3UTR GCA 90 bp | CTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGAGTTTGCTATTACAGTTaGTGTATGACACACAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: LTTFQCAPGQSSSAGQAGVCYYS*CMTHRI Trigger: AATTCTGTGTGTCATACAGCAACTGTAATAGCAAAC...TCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| 3UTR CAA 72 bp | ATCCAGTCTCCTGGTCTCCAGAGCAATGCCAATCGCTaGCTTATACTTGTGATCATCGAGACATCGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IQSPGLQSNANR*LILVIIETSLE Trigger: TTCCAGCGATGTCTCGATGATCACAAGTATAAGCAAGCGATTGGCATTGCTCTGGAGACCAGGAGACTGGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CAA 72 bp | CTGCCTCCCCTGTCACAGCATCATCCTGATACAGGTTaGTTTTCAGCAAATCATACACATCCTGACGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPPLSQHHPDTG*FSANHTHPDVQ Trigger: CTGCACGTCAGGATGTGTATGATTTGCTGAAAACAAACCTGTATCAGGATGATGCTGTGACAGGGGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CAA 72 bp | AATGCCAACTGCCAGACCGCGCAGAATCTTCTCGTGTaGAGTCTCTTGTGCATAGCCAACCATATCCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: NANCQTAQNLLV*SLLCIANHILN Trigger: ATTGAGGATATGGTTGGCTATGCACAAGAGACTCAACACGAGAAGATTCTGCGCGGTCTGGCAGTTGGCATT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| CDS-3UTR CCA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCCAGGATATGCGAATGTaGATGGTTTACAATTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGQDMRM*MVYNLI Trigger: AATCAAATTGTAAACCATCCACATTCGCATATCCTG...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
||
| 3UTR CAA 72 bp | TCGTTGGTCATTGGCTCTAGTAAATTAATTGCTTCCTaGTTTCCTGTACCAGCACAGCAGATTCCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVIGSSKLIAS*FPVPAQQIPRA Trigger: GGCCCTGGGAATCTGCTGTGCTGGTACAGGAAACAAGGAAGCAATTAATTTACTAGAGCCAATGACCAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAGTGACTCCACTGCTGCTCTTCTGACATCATCATTGACATCACTTACAAAATTCCTTAAGCTGTaGCTCTTCTTCATCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KPSDSTAALLTSSLTSLTKFLKL*LFFIQK Trigger: CTTCTGGATGAAGAAGAGCCACAGCTTAAGGAATTT...TGTAAGTGATGTCAATGATGATGTCAGAAGAGCAGCAGTGGAGTCACTTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| 3UTR CAA 72 bp | GAGGGGCAGGATATGCGAATGTGGATGGTTTACAATTaGATTTATATTGAACTTTCGGCATCTTTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: EGQDMRMWMVYN*IYIELSASLNP Trigger: AGGATTTAAAGATGCCGAAAGTTCAATATAAATCAAATTGTAAACCATCCACATTCGCATATCCTGCCCCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
||
| CDS-3UTR CAA 90 bp | ATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCGCCGTTGCAGTAAATTaGGCCCAGTTGGTGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISVCARTVFFSWAGGIPGAVAVN*AQLVAL Trigger: CAGAGCCACCAACTGGGCCAAATTTACTGCAACGGC...GCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATGACGTGCAGTTCCCATaGCAGCCAAACCAAGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDDVQFP*QPNQGP Trigger: TGGGCCTTGGTTTGGCTGCAATGGGAACTGCACGTC...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCTTCCTCTTCAATCTTaGGGCCGTGTGCTGCCACGG | + |
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Preference number: 5 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDLPLQS*GRVLPR Trigger: CCGTGGCAGCACACGGCCCAAAGATTGAAGAGGAAG...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | GTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGGGCACAGTCCCCGTATaGGTAGATCCAGGCACAGAA | + |
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Preference number: 5 (lower is better) Translates to: VPSRHFSVRQDSLLQLGRGTVPV*VDPGTE Trigger: TTCTGTGCCTGGATCTACCAATACGGGGACTGTGCC...CCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | TCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGTAAATTTGGCCCAGTaGGTGGCTCTGGCCAACCAT | + |
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Preference number: 5 (lower is better) Translates to: SLTTFQCAPGQSSSAGQAVNLAQ*VALANH Trigger: ATGGTTGGCCAGAGCCACCAACTGGGCCAAATTTAC...CGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | TTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGCCCAGAATCTTCTCGTGTaGAGTCTCTTGTGCATAGCC | + |
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Preference number: 5 (lower is better) Translates to: FQCAPGQSSSAGQAGSLAQNLLV*SLLCIA Trigger: GGCTATGCACAAGAGACTCAACACGAGAAGATTCTG...GGCCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | CCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGACAAAGAAACCACACTaGGACACTGTTCAGGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: PSRHFSVRQDSLLQLGRRTKKPH*DTVQAS Trigger: GGACGCCTGAACAGTGTCCAAGTGTGGTTTCTTTGT...CCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | CCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGGAGTTATCATTGACGTaGAAGAGGTCACCTGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: PHDISVCARTVFFSWAGGELSLT*KRSPAP Trigger: TGGAGCAGGTGACCTCTTCAACGTCAATGATAACTC...CCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | TGGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCTGCATCCAGTATGCCTaGGGCCAGAATAGCGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: WVPSRHFSVRQDSLLQLGCIQYA*GQNSAK Trigger: TTTGGCGCTATTCTGGCCCAAGGCATACTGGATGCA...GCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | CACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCTTGTCATTGATGACTTaGGAATACAGCTGCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: HDISVCARTVFFSWAGGILSLMT*EYSCRN Trigger: GTTCCGGCAGCTGTATTCCAAAGTCATCAATGACAA...GATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | CCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGAGAATAGCGCCAAATTaGGCCATGACATCATCATGT | + |
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Preference number: 5 (lower is better) Translates to: PHDISVCARTVFFSWAGGRIAPN*AMTSSC Trigger: ACATGATGATGTCATGGCCAAATTTGGCGCTATTCT...CCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | GGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGAGCAATGCCAATCGCTaGCTTATACTTGTGATCATC | + |
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Preference number: 5 (lower is better) Translates to: GSLTTFQCAPGQSSSAGQSNANR*LILVII Trigger: GATGATCACAAGTATAAGCAAGCGATTGGCATTGCT...CTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | CATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATCCCTGGAGTTTGCTATTACAGTaGCTGTATGACACACAGAAT | + |
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Preference number: 5 (lower is better) Translates to: HFSVRQDSLLQLGRRDPWSLLLQ*LYDTQN Trigger: ATTCTGTGTGTCATACAGCAACTGTAATAGCAAACT...CCAGGGATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCATCTTTAAATCCTaGTTAAGGCCAATGACACAG | + |
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Preference number: 5 (lower is better) Translates to: GFPHDISVCARTVFFSWAGIFKS*LRPMTQ Trigger: CTGTGTCATTGGCCTTAACAAGGATTTAAAGATGCC...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | TCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGCGGGATTATTCAGAGTTATCATaGACGTTGAAGAGGTCACCT | + |
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Preference number: 5 (lower is better) Translates to: SRHFSVRQDSLLQLGRRDYSELS*TLKRSP Trigger: AGGTGACCTCTTCAACGTCAATGATAACTCTGAATA...ATCCCGCCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | GTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAGGAAATTAATTGCTTCCTaGTTTCCTGTACCAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: VPSRHFSVRQDSLLQLGRKLIAS*FPVPAQ Trigger: CTGTGCTGGTACAGGAAACAAGGAAGCAATTAATTT...CCTGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCAACGACTGCATTCAATTaGTGTAGTGCAAATTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: GFPHDISVCARTVFFSWATTAFN*CSANSL Trigger: TAAGGAATTTGCACTACACAAATTGAATGCAGTCGT...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | GGGTTCCCTCACGACATTTCAGTGTGCGCCAGGACAGTCTTCTTCAGCTGGGCACATCCTGATACAGGTTaGTTTTCAGCAAATCATACA | + |
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Preference number: 5 (lower is better) Translates to: GFPHDISVCARTVFFSWAHPDTG*FSANHT Trigger: TGTATGATTTGCTGAAAACAAACCTGTATCAGGATG...TGCCCAGCTGAAGAAGACTGTCCTGGCGCACACTGAAATGTCGTGAGGGAACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS CCA 90 bp | AAAGGCTGGTATCTGCAGGTCTCTGTCATACTTAAGACCTTCAGCTaGGCAGGCATAACTCGTGCTGGATTATCCAACAGCTGGAAGTTT | + |
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Preference number: 5 (lower is better) Translates to: KGWYLQVSVILKTFS*AGITRAGLSNSWKF Trigger: AAACTTCCAGCTGTTGGATAATCCAGCACGAGTTATGCCTGCCCAGCTGAAGGTCTTAAGTATGACAGAGACCTGCAGATACCAGCCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS GCA 90 bp | AGTCTCCACATATTCAGAGTTATCATTGACGTTGAAGAGGTCACCTaGTCCAAGAGCATAATTCAGAGACTCCTCAAAAGCCCCCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: SLHIFRVIIDVEEVT*SKSIIQRLLKSPQV Trigger: CACCTGGGGGCTTTTGAGGAGTCTCTGAATTATGCTCTTGGAGCAGGTGACCTCTTCAACGTCAATGATAACTCTGAATATGTGGAGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS-3UTR CAA 90 bp | CCCTTATGGATTACACCCAAGCTGGCCGTTGCAGTAAATTTGGCCCAGTTGGTGACGACTGCATTCAATTaGTGTAGTGCAAATTCCTTA | + |
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Preference number: 5 (lower is better) Translates to: PLWITPKLAVAVNLAQLVTTAFN*CSANSL Trigger: TAAGGAATTTGCACTACACAAATTGAATGCAGTCGT...CACCAACTGGGCCAAATTTACTGCAACGGCCAGCTTGGGTGTAATCCATAAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139715.8 |
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| CDS GCA 72 bp | TCGATATACTCGAACGGCTCTGGGGGCTCTGGCTCTTaGTCTTCCTCTTCAATCTTTGGGCCGTGTGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: SIYSNGSGGSGS*SSSSIFGPCAA Trigger: GGCAGCACACGGCCCAAAGATTGAAGAGGAAGAGCAAGAGCCAGAGCCCCCAGAGCCGTTCGAGTATATCGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS GCA 72 bp | CTCTTGCTCTTCCTCTTCAATCTTTGGGCCGTGTGCTaGCACGGGTTCCACGAGTTCTTCAACGTCTTCGCT | + |
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Preference number: 6 (lower is better) Translates to: LLLFLFNLWAVC*HGFHEFFNVFA Trigger: AGCGAAGACGTTGAAGAACTCGTGGAACCCGTGGCAGCACACGGCCCAAAGATTGAAGAGGAAGAGCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS GCA 72 bp | TGGCTCTTGCTCTTCCTCTTCAATCTTTGGGCCGTGTaGTGCCACGGGTTCCACGAGTTCTTCAACGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: WLLLFLFNLWAV*CHGFHEFFNVF Trigger: GAAGACGTTGAAGAACTCGTGGAACCCGTGGCAGCACACGGCCCAAAGATTGAAGAGGAAGAGCAAGAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS GCA 72 bp | CCCCAGGTGATAAAACACTTTCGAGGCCACCAGGGCTaGAAACTGCCGACTTCGGAAACCTTCATCTTCATA | + |
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Preference number: 6 (lower is better) Translates to: PQVIKHFRGHQG*KLPTSETFIFI Trigger: TATGAAGATGAAGGTTTCCGAAGTCGGCAGTTTGCAGCCCTGGTGGCCTCGAAAGTGTTTTATCACCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS CCA 72 bp | TATCTGCAGGTCTCTGTCATACTTAAGACCTTCAGCTaGGCAGGCATAACTCGTGCTGGATTATCCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: YLQVSVILKTFS*AGITRAGLSNS Trigger: GCTGTTGGATAATCCAGCACGAGTTATGCCTGCCCAGCTGAAGGTCTTAAGTATGACAGAGACCTGCAGATA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027432.9 |
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| CDS CAA 72 bp | ATCTCTGCCCAGAAGTCATTCACGACTGCATTCAATTaGTGTAGTGCAAATTCCTTAAGCTGTGGCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: ISAQKSFTTAFN*CSANSLSCGSS Trigger: AGAAGAGCCACAGCTTAAGGAATTTGCACTACACAAATTGAATGCAGTCGTGAATGACTTCTGGGCAGAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027432.9 ENSMUST00000139715.8 |
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