Pregenerated sensors for PSMC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030603Ensembl transcript IDs: ENSMUST00000032824.10, ENSMUST00000140053.3
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGTGGGTGGTGGAGCCCACGATaGCTGTGTTCTGATCCACAG | + |
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Preference number: 4 (lower is better) Translates to: ILGKEKTSLWDRCLGKCGWWSPR*LCSDPQ Trigger: CTGTGGATCAGAACACAGCCATCGTGGGCTCCACCA...CCCACACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | AAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTCCAGCAGGATCCTCTaGACCTCCCTGTCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: KPILGKEKTSLWDRCLGKSSRIL*TSLSAP Trigger: AGGAGCTGACAGGGAGGTTCAGAGGATCCTGCTGGA...CTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | AAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGGCAGCTCCCGGTCGATaGTACTCAGGATGCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: KPILGKEKTSLWDRCLGKAAPGR*YSGCAH Trigger: ATGTGCGCATCCTGAGTACCATCGACCGGGAGCTGC...CTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | TCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGTGGGGTTGATATACTCCTCCTaGACTTCCAGGAACTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SWVKRKLAFGTGAWGSVGLIYSS*TSRNSS Trigger: GCTGGAGTTCCTGGAAGTGCAGGAGGAGTATATCAA...CCCCACACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | TTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGCATTGCTGTGCTTGTaGAGGGCCACCGAGGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: LTKPILGKEKTSLWDRCLALLCL*RATEAL Trigger: CAACGCCTCGGTGGCCCTGCACAAGCACAGCAATGC...CAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | AACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTACCTCCTCCTGGGCGTaGAGGAATTCCTTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: NQSWVKRKLAFGTGAWGSTSSWA*RNSFFR Trigger: CCTGAAGAAGGAATTCCTCCACGCCCAGGAGGAGGT...ACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | CCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGTCTCACCTCCTGCTTCTaGATGTCCATGCCTCCGATA | + |
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Preference number: 4 (lower is better) Translates to: PILGKEKTSLWDRCLGKCLTSCF*MSMPPI Trigger: TATCGGAGGCATGGACATCCAGAAGCAGGAGGTGAG...ACACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | TTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCAAGGACAGGCCGGTCTaGGGCCGAGACACGGACAGT | + |
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Preference number: 4 (lower is better) Translates to: LLTKPILGKEKTSLWDRCKDRPV*GRDTDS Trigger: ACTGTCCGTGTCTCGGCCGCAGACCGGCCTGTCCTT...GCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | TCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGTGGGGTTCTTCAGGTTCTTCTaGTCGTCCTTGATATACTCC | + |
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Preference number: 4 (lower is better) Translates to: SWVKRKLAFGTGAWGSVGFFRFF*SSLIYS Trigger: GGAGTATATCAAGGACGAGCAGAAGAACCTGAAGAA...CCCCACACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | AATAGATCCAATCACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGAAACCGAGGCGTTGGGCTTaGGCAGCTCCCGGTCGATGG | + |
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Preference number: 4 (lower is better) Translates to: NRSNHVHLLTKPILGKEKPRRWA*AAPGRW Trigger: CCATCGACCGGGAGCTGCTCAAGCCCAACGCCTCGG...TTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTGATTGGATCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | GTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACACCAGGGCATTGCTGTaGTTGTGCAGGGCCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: VHLLTKPILGKEKTSLWDTRALL*LCRATE Trigger: CTCGGTGGCCCTGCACAAGCACAGCAATGCCCTGGT...GTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | AACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGATCACGGTCTTGTATaGTTTCTCGAAGTCCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: NQSWVKRKLAFGTGAWGSDHGLV*FLEVLG Trigger: GCCAAGGACTTCGAGAAAGCATACAAGACCGTGATC...ACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | ACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGATCACATCTGGCTTCTaGTCTGAGGTGAGCATCATG | + |
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Preference number: 4 (lower is better) Translates to: TKPILGKEKTSLWDRCLGITSGF*SEVSIM Trigger: CATGATGCTCACCTCAGACCAGAAGCCAGATGTGAT...CCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | TTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGACGATGGCTGTGTTCTaGTCCACAGCTTCCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LTKPILGKEKTSLWDRCLTMAVF*STASKN Trigger: GTTCTTGGAAGCTGTGGATCAGAACACAGCCATCGT...CAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | CATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTCACCCAGGTACTTCTaGACAAACTCCGAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: HLLTKPILGKEKTSLWDRSPRYF*TNSEPT Trigger: GGTGGGCTCGGAGTTTGTTCAGAAGTACCTGGGTGA...CCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | TTAAATAGATCCAATCACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGCAGGAGGGCCATACATaGGGACACCTCGGGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: LNRSNHVHLLTKPILGKEQEGHT*GHLGED Trigger: ATCCTCCCCGAGGTGTCCTCATGTATGGCCCTCCTG...CTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTGATTGGATCTATTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | TTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGAACATTCCACTCTCCTaGCAGATGGAGTTGATATCG | + |
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Preference number: 4 (lower is better) Translates to: LTKPILGKEKTSLWDRCLNIPLS*QMELIS Trigger: CGATATCAACTCCATCTGTCAGGAGAGTGGAATGTT...CAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | CACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGCTGTCAGCTCCTGTCTaGGCATCGAATCTCTTGGTG | + |
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Preference number: 4 (lower is better) Translates to: HVHLLTKPILGKEKTSLWLSAPV*ASNLLV Trigger: CACCAAGAGATTCGATGCCCAGACAGGAGCTGACAG...CCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | CATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGGTTGATATCGGCTCCTaGAATCTTATCTGGACGGGC | + |
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Preference number: 4 (lower is better) Translates to: HLLTKPILGKEKTSLWDRVDIGS*NLIWTG Trigger: GCCCGTCCAGATAAGATTTCAGGAGCCGATATCAAC...CCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | CATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGCCGAGACACGGACAGTaGTGGAATCTCATCCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: HLLTKPILGKEKTSLWDRPRHGQ*WNLILN Trigger: ATTCAGGATGAGATTCCAGCACTGTCCGTGTCTCGG...CCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | TTAAATAGATCCAATCACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGACCAAGGGGATGCTCTaGATCCGCTTCACCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LNRSNHVHLLTKPILGKETKGML*IRFTSS Trigger: GGAGGAGGTGAAGCGGATCCAGAGCATCCCCTTGGT...CTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTGATTGGATCTATTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | TTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCGGGCATCGAATCTCTTaGTGGCAATGGCATCAATTT | + |
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Preference number: 4 (lower is better) Translates to: LLTKPILGKEKTSLWDRCGHRIS*WQWHQF Trigger: AAATTGATGCCATTGCCACCAAGAGATTCGATGCCC...GCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | CACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGAGACACGGACAGTGCTaGAATCTCATCCTGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: HVHLLTKPILGKEKTSLWRHGQC*NLILNL Trigger: AAGATTCAGGATGAGATTCCAGCACTGTCCGTGTCT...CCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR GCA 90 bp | TTAAATAGATCCAATCACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGGCTTCTGGATGTCCATaGCTCCGATATCGGCATACA | + |
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Preference number: 4 (lower is better) Translates to: LNRSNHVHLLTKPILGKEASGCP*LRYRHT Trigger: TGTATGCCGATATCGGAGGCATGGACATCCAGAAGC...CTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTGATTGGATCTATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CCA 90 bp | TTAAATAGATCCAATCACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGGCGACGGTCAGGGAGTaGGAATTCAATTTTTCGGTC | + |
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Preference number: 4 (lower is better) Translates to: LNRSNHVHLLTKPILGKEATVRE*EFNFSV Trigger: GACCGAAAAATTGAATTCCCACTCCCTGACCGTCGC...CTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTGATTGGATCTATTTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR TCA 90 bp | AATAGATCCAATCACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAGCTGGAATCTCATCCTaGATCTTTTCCACCAAAATG | + |
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Preference number: 4 (lower is better) Translates to: NRSNHVHLLTKPILGKEKAGISS*IFSTKM Trigger: CATTTTGGTGGAAAAGATTCAGGATGAGATTCCAGC...TTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTGATTGGATCTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS GCA 90 bp | CTGCTGTCGGCCTCGGGAGGCAGCACGTCCACCAGGGCATTGCTGTaGTTGTGCAGGGCCACCGAGGCGTTGGGCTTGAGCAGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LLSASGGSTSTRALL*LCRATEALGLSSSR Trigger: CCGGGAGCTGCTCAAGCCCAACGCCTCGGTGGCCCTGCACAAGCACAGCAATGCCCTGGTGGACGTGCTGCCTCCCGAGGCCGACAGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS TCA 90 bp | CGGAACACATCCCGGACCATCCGGGGGCCCTCACCCAGGTACTTCTaGACAAACTCCGAGCCCACCACACGGATAAATGCAGCTGTCGTG | + |
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Preference number: 5 (lower is better) Translates to: RNTSRTIRGPSPRYF*TNSEPTTRINAAVV Trigger: CACGACAGCTGCATTTATCCGTGTGGTGGGCTCGGAGTTTGTTCAGAAGTACCTGGGTGAGGGCCCCCGGATGGTCCGGGATGTGTTCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS-3UTR CAA 90 bp | AAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGAGGGCCACCGAGGCGTaGGGCTTGAGCAGCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: KPILGKEKTSLWDRCLGKRATEA*GLSSSR Trigger: CCGGGAGCTGCTCAAGCCCAACGCCTCGGTGGCCCT...CTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS TCA 90 bp | CCACGATGGCTGTGTTCTGATCCACAGCTTCCAAGAACTGACCGATaGCCAAGGGGATGCTCTGGATCCGCTTCACCTCCTCCTGGGCGT | + |
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Preference number: 5 (lower is better) Translates to: PRWLCSDPQLPRTDR*PRGCSGSASPPPGR Trigger: ACGCCCAGGAGGAGGTGAAGCGGATCCAGAGCATCCCCTTGGTCATCGGTCAGTTCTTGGAAGCTGTGGATCAGAACACAGCCATCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS GCA 90 bp | GGAGGGCCATACATGAGGACACCTCGGGGAGGATCGATGCCAATCTaGTTGTACAGCTCGAAGTGTGTAAGCGGGAGTTCCACAGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GGPYMRTPRGGSMPI*LYSSKCVSGSSTAS Trigger: GGAGGCTGTGGAACTCCCGCTTACACACTTCGAGCTGTACAAGCAGATTGGCATCGATCCTCCCCGAGGTGTCCTCATGTATGGCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS-3UTR CAA 90 bp | CTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAACCGAGGCGTTGGGCTaGAGCAGCTCCCGGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: LNQSWVKRKLAFGTGAWGTEALG*SSSRSM Trigger: CATCGACCGGGAGCTGCTCAAGCCCAACGCCTCGGT...TCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CAA 90 bp | CAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGTGACGTCCACCAGGGCATaGCTGTGCTTGTGCAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: QSWVKRKLAFGTGAWGSVTSTRA*LCLCRA Trigger: GGCCCTGCACAAGCACAGCAATGCCCTGGTGGACGT...CACACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS TCA 90 bp | CCACGATGGCTGTGTTCTGATCCACAGCTTCCAAGAACTGACCGATaGCCAAGGGGATGCTCTGGATCCGCTTCACCTCCTCCTTGTAGC | + |
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Preference number: 5 (lower is better) Translates to: PRWLCSDPQLPRTDR*PRGCSGSASPPPCS Trigger: GCTACAAGGAGGAGGTGAAGCGGATCCAGAGCATCCCCTTGGTCATCGGTCAGTTCTTGGAAGCTGTGGATCAGAACACAGCCATCGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140053.3 |
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| CDS TCA 90 bp | CCTGGGCGTGGAGGAATTCCTTCTTCAGGTTCTTCTGCTCGTCCTTaGTATACTCCTCCTGCACTTCCAGGAACTCCAGCTCCTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: PGRGGIPSSGSSARP*YTPPALPGTPAPAA Trigger: TGCAGCAGGAGCTGGAGTTCCTGGAAGTGCAGGAGGAGTATATCAAGGACGAGCAGAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS CCA 90 bp | ATGACCAAGGGGATGCTCTGGATCCGCTTCACCTCCTCCTGGGCGTaGAGGAATTCCTTCTTCAGGTTCTTCTGCTCGTCCTTGATATAC | + |
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Preference number: 5 (lower is better) Translates to: MTKGMLWIRFTSSWA*RNSFFRFFCSSLIY Trigger: GTATATCAAGGACGAGCAGAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGGAGGAGGTGAAGCGGATCCAGAGCATCCCCTTGGTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS TCA 90 bp | CATAGTCTTCCAGGTCGACCTCCTCAGAGAGGTTCATTTTGCTGGTaGTGGTGGAGAAAATCAACCTCTTCTGGCGACGGTCAGGGAGTG | + |
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Preference number: 5 (lower is better) Translates to: HSLPGRPPQRGSFCW*WWRKSTSSGDGQGV Trigger: CACTCCCTGACCGTCGCCAGAAGAGGTTGATTTTCTCCACCATCACCAGCAAAATGAACCTCTCTGAGGAGGTCGACCTGGAAGACTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS TCA 90 bp | AGCCAACATTCCACTCTCCTGACAGATGGAGTTGATATCGGCTCCTaGAATCTTATCTGGACGGGCCACATAGTCTTCCAGGTCGACCTC | + |
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Preference number: 5 (lower is better) Translates to: SQHSTLLTDGVDIGS*NLIWTGHIVFQVDL Trigger: GAGGTCGACCTGGAAGACTATGTGGCCCGTCCAGATAAGATTTCAGGAGCCGATATCAACTCCATCTGTCAGGAGAGTGGAATGTTGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS-3UTR CAA 90 bp | ATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGTGGGTTCTTGATCACGGTCTaGTATGCTTTCTCGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: ILGKEKTSLWDRCLGKCGFLITV*YAFSKS Trigger: GGACTTCGAGAAAGCATACAAGACCGTGATCAAGAA...CCCACACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CAA 90 bp | CTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGATTCTTCTGCTCGTCCTaGATATACTCCTCCTGCACT | + |
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Preference number: 5 (lower is better) Translates to: LNQSWVKRKLAFGTGAWGFFCSS*IYSSCT Trigger: AGTGCAGGAGGAGTATATCAAGGACGAGCAGAAGAA...TCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CAA 90 bp | AACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTGATGTGCCACAGCCTTaGCTAACATTGTCTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: NQSWVKRKLAFGTGAWGSDVPQP*LTLSFH Trigger: GTGGAAAGACAATGTTAGCAAAGGCTGTGGCACATC...ACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CAA 90 bp | AACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGGGGAAGTTGGGCATCGAATCTCTaGGTGGCAATGGCATCAATT | + |
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Preference number: 5 (lower is better) Translates to: NQSWVKRKLAFGTGAWGSWASNL*VAMASI Trigger: AATTGATGCCATTGCCACCAAGAGATTCGATGCCCA...ACTTCCCCAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS-3UTR CAA 90 bp | TTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGGACAGGTGCCTGTCAGAGAGGTTCATTTaGCTGGTGATGGTGGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LTKPILGKEKTSLWDRCLSERFI*LVMVEK Trigger: TTTCTCCACCATCACCAGCAAAATGAACCTCTCTGA...CAGGCACCTGTCCCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS GCA 90 bp | GTAAAATTCATGTTCCTGTTCATCTTTCTTGATCACGGTCTTGTATaGTTTCTCGAAGTCCTTGGCCAGGACAATGTAGCGGTTCTCACG | + |
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Preference number: 5 (lower is better) Translates to: VKFMFLFIFLDHGLV*FLEVLGQDNVAVLT Trigger: CGTGAGAACCGCTACATTGTCCTGGCCAAGGACTTCGAGAAAGCATACAAGACCGTGATCAAGAAAGATGAACAGGAACATGAATTTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS-3UTR CAA 90 bp | CACGTCCATTTATTGACTAAACCAATCCTGGGTAAAGAGAAAACTAGCCTTTGGTCCTGTTCATCTTTCTaGATCACGGTCTTGTATGCT | + |
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Preference number: 5 (lower is better) Translates to: HVHLLTKPILGKEKTSLWSCSSF*ITVLYA Trigger: AGCATACAAGACCGTGATCAAGAAAGATGAACAGGA...CCAAAGGCTAGTTTTCTCTTTACCCAGGATTGGTTTAGTCAATAAATGGACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS GCA 72 bp | GCCTCGGGAGGCAGCACGTCCACCAGGGCATTGCTGTaGTTGTGCAGGGCCACCGAGGCGTTGGGCTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASGGSTSTRALL*LCRATEALGLS Trigger: GCTCAAGCCCAACGCCTCGGTGGCCCTGCACAAGCACAGCAATGCCCTGGTGGACGTGCTGCCTCCCGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS GCA 72 bp | TGTCGGCCTCGGGAGGCAGCACGTCCACCAGGGCATTaGTGTGCTTGTGCAGGGCCACCGAGGCGTTGGGCT | + |
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Preference number: 6 (lower is better) Translates to: CRPREAARPPGH*CACAGPPRRWA Trigger: AGCCCAACGCCTCGGTGGCCCTGCACAAGCACAGCAATGCCCTGGTGGACGTGCTGCCTCCCGAGGCCGACA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS TCA 72 bp | TGCTGTGCTTGTGCAGGGCCACCGAGGCGTTGGGCTTaGGCAGCTCCCGGTCGATGGTACTCAGGATGCGCA | + |
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Preference number: 6 (lower is better) Translates to: CCACAGPPRRWA*AAPGRWYSGCA Trigger: TGCGCATCCTGAGTACCATCGACCGGGAGCTGCTCAAGCCCAACGCCTCGGTGGCCCTGCACAAGCACAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CAA 72 bp | TTGCTGTGCTTGTGCAGGGCCACCGAGGCGTTGGGCTaGAGCAGCTCCCGGTCGATGGTACTCAGGATGCGC | + |
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Preference number: 6 (lower is better) Translates to: LLCLCRATEALG*SSSRSMVLRMR Trigger: GCGCATCCTGAGTACCATCGACCGGGAGCTGCTCAAGCCCAACGCCTCGGTGGCCCTGCACAAGCACAGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS GCA 72 bp | TCTTCAGGTTCGGGTCCCAGAAAGGACAGGCCGGTCTaGGGCCGAGACACGGACAGTGCTGGAATCTCATCC | + |
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Preference number: 6 (lower is better) Translates to: SSGSGPRKDRPV*GRDTDSAGISS Trigger: GGATGAGATTCCAGCACTGTCCGTGTCTCGGCCGCAGACCGGCCTGTCCTTTCTGGGACCCGAACCTGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS TCA 72 bp | TCCCGGACCATCCGGGGGCCCTCACCCAGGTACTTCTaGACAAACTCCGAGCCCACCACACGGATAAATGCA | + |
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Preference number: 6 (lower is better) Translates to: SRTIRGPSPRYF*TNSEPTTRINA Trigger: TGCATTTATCCGTGTGGTGGGCTCGGAGTTTGTTCAGAAGTACCTGGGTGAGGGCCCCCGGATGGTCCGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CAA 90 bp | GGGCCATACATGAGGACACCTCGGGGAGGATCGATGCCAATCTGCTaGTACAGCTCGAAGTGTGTAAGCGGGAGTTCCACAGCCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: GPYMRTPRGGSMPIC*YSSKCVSGSSTASL Trigger: GAGGGAGGCTGTGGAACTCCCGCTTACACACTTCGAGCTGTACAAGCAGATTGGCATCGATCCTCCCCGAGGTGTCCTCATGTATGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CCA 72 bp | GGGATGCTCTGGATCCGCTTCACCTCCTCCTGGGCGTaGAGGAATTCCTTCTTCAGGTTCTTCTGCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: GMLWIRFTSSWA*RNSFFRFFCSS Trigger: GGACGAGCAGAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGGAGGAGGTGAAGCGGATCCAGAGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS CCA 72 bp | GGACAGGCCGGTCTGCGGCCGAGACACGGACAGTGCTaGAATCTCATCCTGAATCTTTTCCACCAAAATGCC | + |
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Preference number: 6 (lower is better) Translates to: GQAGLRPRHGQC*NLILNLFHQNA Trigger: GGCATTTTGGTGGAAAAGATTCAGGATGAGATTCCAGCACTGTCCGTGTCTCGGCCGCAGACCGGCCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CCA 72 bp | ACCAAGGGGATGCTCTGGATCCGCTTCACCTCCTCCTaGGCGTGGAGGAATTCCTTCTTCAGGTTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TKGMLWIRFTSS*AWRNSFFRFFC Trigger: GCAGAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGGAGGAGGTGAAGCGGATCCAGAGCATCCCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS CAA 90 bp | TCCTGGGCGTGGAGGAATTCCTTCTTCAGGTTCTTCTGCTCGTCCTaGATATACTCCTCCTGCACTTCCAGGAACTCCAGCTCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: SWAWRNSFFRFFCSS*IYSSCTSRNSSSCC Trigger: GCAGCAGGAGCTGGAGTTCCTGGAAGTGCAGGAGGAGTATATCAAGGACGAGCAGAAGAACCTGAAGAAGGAATTCCTCCACGCCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS TCA 72 bp | CTGTGTTCTGATCCACAGCTTCCAAGAACTGACCGATaGCCAAGGGGATGCTCTGGATCCGCTTCACCTCCT | + |
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Preference number: 6 (lower is better) Translates to: LCSDPQLPRTDR*PRGCSGSASPP Trigger: AGGAGGTGAAGCGGATCCAGAGCATCCCCTTGGTCATCGGTCAGTTCTTGGAAGCTGTGGATCAGAACACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS GCA 72 bp | TACATGAGGACACCTCGGGGAGGATCGATGCCAATCTaGTTGTACAGCTCGAAGTGTGTAAGCGGGAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: YMRTPRGGSMPI*LYSSKCVSGSS Trigger: GGAACTCCCGCTTACACACTTCGAGCTGTACAAGCAGATTGGCATCGATCCTCCCCGAGGTGTCCTCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CAA 72 bp | ATGAGGACACCTCGGGGAGGATCGATGCCAATCTGCTaGTACAGCTCGAAGTGTGTAAGCGGGAGTTCCACA | + |
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Preference number: 6 (lower is better) Translates to: MRTPRGGSMPIC*YSSKCVSGSST Trigger: TGTGGAACTCCCGCTTACACACTTCGAGCTGTACAAGCAGATTGGCATCGATCCTCCCCGAGGTGTCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS GCA 72 bp | AAAGGACAGGCCGGTCTGCGGCCGAGACACGGACAGTaGTGGAATCTCATCCTGAATCTTTTCCACCAAAAT | + |
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Preference number: 6 (lower is better) Translates to: KGQAGLRPRHGQ*WNLILNLFHQN Trigger: ATTTTGGTGGAAAAGATTCAGGATGAGATTCCAGCACTGTCCGTGTCTCGGCCGCAGACCGGCCTGTCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS TCA 72 bp | TCCGAGCCCACCACACGGATAAATGCAGCTGTCGTGTaGTGTGCCACAGCCTTTGCTAACATTGTCTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SEPTTRINAAVV*CATAFANIVFP Trigger: TGGAAAGACAATGTTAGCAAAGGCTGTGGCACATCACACGACAGCTGCATTTATCCGTGTGGTGGGCTCGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS TCA 72 bp | TCCACTCTCCTGACAGATGGAGTTGATATCGGCTCCTaGAATCTTATCTGGACGGGCCACATAGTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: STLLTDGVDIGS*NLIWTGHIVFQ Trigger: CTGGAAGACTATGTGGCCCGTCCAGATAAGATTTCAGGAGCCGATATCAACTCCATCTGTCAGGAGAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CAA 72 bp | TGGAGGAATTCCTTCTTCAGGTTCTTCTGCTCGTCCTaGATATACTCCTCCTGCACTTCCAGGAACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: WRNSFFRFFCSS*IYSSCTSRNSS Trigger: GCTGGAGTTCCTGGAAGTGCAGGAGGAGTATATCAAGGACGAGCAGAAGAACCTGAAGAAGGAATTCCTCCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032824.10 |
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| CDS GCA 72 bp | ATGTTCCTGTTCATCTTTCTTGATCACGGTCTTGTATaGTTTCTCGAAGTCCTTGGCCAGGACAATGTAGCG | + |
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Preference number: 6 (lower is better) Translates to: MFLFIFLDHGLV*FLEVLGQDNVA Trigger: CGCTACATTGTCCTGGCCAAGGACTTCGAGAAAGCATACAAGACCGTGATCAAGAAAGATGAACAGGAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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| CDS CAA 72 bp | AATTCATGTTCCTGTTCATCTTTCTTGATCACGGTCTaGTATGCTTTCTCGAAGTCCTTGGCCAGGACAATG | + |
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Preference number: 6 (lower is better) Translates to: NSCSCSSFLITV*YAFSKSLARTM Trigger: CATTGTCCTGGCCAAGGACTTCGAGAAAGCATACAAGACCGTGATCAAGAAAGATGAACAGGAACATGAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032824.10 ENSMUST00000140053.3 |
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