Pregenerated sensors for PSMC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028932Ensembl transcript IDs: ENSMUST00000030769.7, ENSMUST00000239497.2
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGTCAGTGGGTGCCACCTaGTCACTGAGATCCACCACG | + |
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Preference number: 4 (lower is better) Translates to: AVATSYKSTGSSFTQSPGSVGAT*SLRSTT Trigger: CGTGGTGGATCTCAGTGATCAGGTGGCACCCACTGA...CCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGTCAGTGGGTGCCACCTaGTCACTGAGATCCACCACG | + |
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Preference number: 4 (lower is better) Translates to: VRWQQVTKAQEVLSLRALSVGAT*SLRSTT Trigger: CGTGGTGGATCTCAGTGATCAGGTGGCACCCACTGA...CAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CCA 90 bp | CGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCCTTCTCCTCCTCTTTaGTTTTCCGCTGGTCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: RWQQVTKAQEVLSLRALGPSPPL*FSAGPH Trigger: GTGCGGACCAGCGGAAAACCAAAGAGGAGGAGAAGG...CCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CCA 90 bp | GCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGCCTTCTCCTCCTCTTTaGTTTTCCGCTGGTCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: AVATSYKSTGSSFTQSPGPSPPL*FSAGPH Trigger: GTGCGGACCAGCGGAAAACCAAAGAGGAGGAGAAGG...CCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR GCA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCAGTCCGATTGGCAACTaGCCTAGCACAGAGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGSPIGN*PSTECL Trigger: AAGACACTCTGTGCTAGGGCAGTTGCCAATCGGACT...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CCA 90 bp | TGTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTCATCCAGAGCTCGGATaGGCTTGTCGTCCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: CAVATSYKSTGSSFTQSPHPELG*ACRPSP Trigger: AGGAGAAGGACGACAAGCCCATCCGAGCTCTGGATG...AGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR GCA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCGGTTTTTCCTCCACCTaGATCATGGTAACTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGGFSST*IMVTVG Trigger: CCCAACAGTTACCATGATGCAGGTGGAGGAAAAACC...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR GCA 90 bp | TGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGAGTCCGATTGGCAACTaGCCTAGCACAGAGTGTCTT | + |
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Preference number: 4 (lower is better) Translates to: CGGNKLQKHRKFFHSEPWSPIGN*PSTECL Trigger: AAGACACTCTGTGCTAGGGCAGTTGCCAATCGGACT...CCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGCCTCCGAATCAGCGTTaGTTATCTTCGTACATCTTG | + |
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Preference number: 4 (lower is better) Translates to: AVATSYKSTGSSFTQSPGPPNQR*LSSYIL Trigger: CAAGATGTACGAAGATAATCAACGCTGATTCGGAGG...CCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCCCTCCGAATCAGCGTTaGTTATCTTCGTACATCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGPPNQR*LSSYIL Trigger: CAAGATGTACGAAGATAATCAACGCTGATTCGGAGG...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCCTCATTGAGCGAGCGTaGATCTTAAAGATGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGLIERA*ILKMCV Trigger: AACGCACATCTTTAAGATTCACGCTCGCTCAATGAG...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCCATCTTCAACCTGCTTaGTCTGCCTTGAATAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGHLQPA*SALNKY Trigger: GTACTTATTCAAGGCAGATCAAGCAGGTTGAAGATG...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGCTCATTGAGCGAGCGTaGATCTTAAAGATGTGCGTT | + |
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Preference number: 4 (lower is better) Translates to: VRWQQVTKAQEVLSLRALLIERA*ILKMCV Trigger: AACGCACATCTTTAAGATTCACGCTCGCTCAATGAG...CAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR GCA 90 bp | TGTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGTTTTTCCTCCACCTaGATCATGGTAACTGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: CAVATSYKSTGSSFTQSPGFSST*IMVTVG Trigger: CCCAACAGTTACCATGATGCAGGTGGAGGAAAAACC...AGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | GTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGAATGGCTGTTCACTCTaGAGTGTTTGTTTGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VRWQQVTKAQEVLSLRALNGCSL*SVCLSA Trigger: TGCAGACAAACAAACACTTCAGAGTGAACAGCCATT...CAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | TGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGAATGGCTGTTCACTCTaGAGTGTTTGTTTGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: CGGNKLQKHRKFFHSEPWNGCSL*SVCLSA Trigger: TGCAGACAAACAAACACTTCAGAGTGAACAGCCATT...CCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CCA 90 bp | CGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGATTGATGATGTATTTTaGGTCCTCCGAATCAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: RWQQVTKAQEVLSLRALGIDDVF*VLRISV Trigger: AACGCTGATTCGGAGGACCCAAAATACATCATCAAT...CCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CCA 90 bp | GCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGATTGATGATGTATTTTaGGTCCTCCGAATCAGCGTT | + |
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Preference number: 4 (lower is better) Translates to: AVATSYKSTGSSFTQSPGIDDVF*VLRISV Trigger: AACGCTGATTCGGAGGACCCAAAATACATCATCAAT...CCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | TGTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTCATCTTCAACCTGCTTaGTCTGCCTTGAATAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: CAVATSYKSTGSSFTQSPHLQPA*SALNKY Trigger: GTACTTATTCAAGGCAGATCAAGCAGGTTGAAGATG...AGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR TCA 90 bp | CGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGTTTTTGAGAAGTTGTTaGATGTCATCTTCAACCTGC | + |
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Preference number: 4 (lower is better) Translates to: RWQQVTKAQEVLSLRALGFLRSC*MSSSTC Trigger: GCAGGTTGAAGATGACATTCAACAACTTCTCAAAAA...CCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS CCA 90 bp | TGCCTCCGCGTCTCGGTGATTACACAGCACCTTTCCCGCTTCCGCTaGTGTCTTCCCTTTCTCTTCCCCACCGGAAGTAGCTCCGCGCCC | + |
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Preference number: 5 (lower is better) Translates to: CLRVSVITQHLSRFR*CLPFLFPTGSSSAP Trigger: GGGCGCGGAGCTACTTCCGGTGGGGAAGAGAAAGGGAAGACACCAGCGGAAGCGGGAAAGGTGCTGTGTAATCACCGAGACGCGGAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCCTAGCACAGAGTGTCTaGCCTGTGCCTGGTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGLAQSV*PVPGGP Trigger: TGGGCCACCAGGCACAGGCAAGACACTCTGTGCTAG...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | GCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGAGAGCTCGGATGGGCTaGTCGTCCTTCTCCTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: AVATSYKSTGSSFTQSPGRARMG*SSFSSS Trigger: AGAGGAGGAGAAGGACGACAAGCCCATCCGAGCTCT...CCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | GTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGCTAGCACAGAGTGTCTaGCCTGTGCCTGGTGGCCCA | + |
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Preference number: 5 (lower is better) Translates to: VRWQQVTKAQEVLSLRALLAQSV*PVPGGP Trigger: TGGGCCACCAGGCACAGGCAAGACACTCTGTGCTAG...CAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | CGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGTCCTTCTCCTCCTCTTaGGTTTTCCGCTGGTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: RWQQVTKAQEVLSLRALGSFSSS*VFRWSA Trigger: TGCGGACCAGCGGAAAACCAAAGAGGAGGAGAAGGA...CCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCCAAGCATCAGTCCGATaGGCAACTGCCCTAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGQASVR*ATALAQ Trigger: CTGTGCTAGGGCAGTTGCCAATCGGACTGATGCTTG...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | TGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGCAAGCATCAGTCCGATaGGCAACTGCCCTAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: CGGNKLQKHRKFFHSEPWQASVR*ATALAQ Trigger: CTGTGCTAGGGCAGTTGCCAATCGGACTGATGCTTG...CCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | TGTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTTCCTTCTCCTCCTCTTaGGTTTTCCGCTGGTCCGCA | + |
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Preference number: 5 (lower is better) Translates to: CAVATSYKSTGSSFTQSPSFSSS*VFRWSA Trigger: TGCGGACCAGCGGAAAACCAAAGAGGAGGAGAAGGA...AGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | GTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGATGAGCACCTTGATGTaGCCGCGAGGATCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: VRWQQVTKAQEVLSLRALMSTLM*PRGSKP Trigger: TGGCTTTGATCCTCGCGGCAACATCAAGGTGCTCAT...CAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | TGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGATGAGCACCTTGATGTaGCCGCGAGGATCAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: CGGNKLQKHRKFFHSEPWMSTLM*PRGSKP Trigger: TGGCTTTGATCCTCGCGGCAACATCAAGGTGCTCAT...CCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | GGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTGGGGCTCCTCCGAATCAGCGTaGATTATCTTCGTACATCTT | + |
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Preference number: 5 (lower is better) Translates to: GGNKLQKHRKFFHSEPWGSSESA*IIFVHL Trigger: AAGATGTACGAAGATAATCAACGCTGATTCGGAGGA...GCCCCAGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS-3UTR CAA 90 bp | TGTGCGGTGGCAACAAGTTACAAAAGCACAGGAAGTTCTTTCACTCAGAGCCCTTCCTCCGAATCAGCGTaGATTATCTTCGTACATCTT | + |
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Preference number: 5 (lower is better) Translates to: CAVATSYKSTGSSFTQSPSSESA*IIFVHL Trigger: AAGATGTACGAAGATAATCAACGCTGATTCGGAGGA...AGGGCTCTGAGTGAAAGAACTTCCTGTGCTTTTGTAACTTGTTGCCACCGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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| CDS TCA 72 bp | GGCATTTTAGAAGCCGCAAGTGCCTCCGCGTCTCGGTaGTTACACAGCACCTTTCCCGCTTCCGCTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: GILEAASASASR*LHSTFPASAGV Trigger: GACACCAGCGGAAGCGGGAAAGGTGCTGTGTAATCACCGAGACGCGGAGGCACTTGCGGCTTCTAAAATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239497.2 |
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| CDS CCA 72 bp | GTCTCGGTGATTACACAGCACCTTTCCCGCTTCCGCTaGTGTCTTCCCTTTCTCTTCCCCACCGGAAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: VSVITQHLSRFR*CLPFLFPTGSS Trigger: GCTACTTCCGGTGGGGAAGAGAAAGGGAAGACACCAGCGGAAGCGGGAAAGGTGCTGTGTAATCACCGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239497.2 |
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| CDS CCA 72 bp | TGTGCAAACACTTCTAATCTCCGCTCCAGTACTGTTTaGACACAGGCGGGCCAACAGCTCAAATCGAATGTC | + |
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Preference number: 6 (lower is better) Translates to: CANTSNLRSSTV*TQAGQQLKSNV Trigger: GACATTCGATTTGAGCTGTTGGCCCGCCTGTGTCCAAACAGTACTGGAGCGGAGATTAGAAGTGTTTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030769.7 ENSMUST00000239497.2 |
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