Pregenerated sensors for PSMB7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026750Ensembl transcript IDs: ENSMUST00000028083.6
Found 41 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACTCGGGAGGCGGCCAGTaGTCAGAGAGTGGAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHSGGGQ*SESGAP Trigger: TGGAGCTCCACTCTCTGACCACTGGCCGCCTCCCGA...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACTGTACCGGCCAAGCCTaGTCCCTTTCTTGTTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHCTGQA*SLSCWA Trigger: TGCCCAACAAGAAAGGGACCAGGCTTGGCCGGTACA...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCATGTCATGTCTGTGTCTaGAGCTGTCCCAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTACHVCV*SCPSTT Trigger: TGTGGTGCTGGGACAGCTGCAGACACAGACATGACA...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCAAACCATCCCTTCAGTTaGTCTCGTGTCTGCTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: RGGMHPESSRVIQPPTAPNHPFS*SRVCSK Trigger: CTTGGAGCAGACACGAGAGCAACTGAAGGGATGGTT...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCAAAACACAGCCATTGCTaGCAAGGAGCCAGAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTAKHSHC*QGARTH Trigger: ATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTGTTT...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCATTCAAACACAGCCATTaGTGCCAAGGAGCCAGAACC | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTAFKHSH*CQGART Trigger: GGTTCTGGCTCCTTGGCAGCAATGGCTGTGTTTGAA...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCCAGTGGTCAGAGAGTaGAGCTCCAAGTTGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHPVVRE*SSKLEE Trigger: TTCTTCCAACTTGGAGCTCCACTCTCTGACCACTGG...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCTGCTCCAAGAACTATaGCATCCTTATACACCACCC | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHLLQEL*HPYTPP Trigger: GGGTGGTGTATAAGGATGGCATAGTTCTTGGAGCAG...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCAAGTTGCTCTCGTGTCTaGTCCAAGAACTATGCCATC | + |
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Preference number: 4 (lower is better) Translates to: RGGMHPESSRVIQPPTAPSCSRV*SKNYAI Trigger: GATGGCATAGTTCTTGGAGCAGACACGAGAGCAACT...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCATGGTCCCTTTCTTGTTaGGCACTGAGAATGGACGAA | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTAWSLSC*ALRMDE Trigger: TTCGTCCATTCTCAGTGCCCAACAAGAAAGGGACCA...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCATGTAACCTTGATACCTaGAGAGCATCTGCTTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RGGMHPESSRVIQPPTAPCNLDT*RASASA Trigger: TGCTGAAGCAGATGCTCTTCAGGTATCAAGGTTACA...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR TCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACAGCCAGAACCCATGGTaGCATAAGGCAATTTATCAG | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHSQNPW*HKAIYQ Trigger: CTGATAAATTGCCTTATGTCACCATGGGTTCTGGCT...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR TCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCATTTCTTGTTGGGCACTaGGAATGGACGAAGAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTAFLVGH*EWTKKV Trigger: GACTTTCTTCGTCCATTCTCAGTGCCCAACAAGAAA...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR TCA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCAGAAGTATCCATTGTCTaGACAGTCTCTTCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: RGGMHPESSRVIQPPTAPEVSIV*TVSSST Trigger: GGTGCTAGAAGAGACTGTTCAGACAATGGATACTTC...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCATACCTGAAGAGCATCTaGTTCAGCATCCGATTAGCT | + |
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Preference number: 4 (lower is better) Translates to: RGGMHPESSRVIQPPTAPYLKSI*FSIRLA Trigger: AGCTAATCGGATGCTGAAGCAGATGCTCTTCAGGTA...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCACACAGATCAATGTTaGTTCCAGACCCCAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHHTDQC*FQTPSH Trigger: ATGACTTGGGGTCTGGAAGCAACATTGATCTGTGTG...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACACTCACTAGCTTCTTaGCTTCTTCCTCCTCCATAT | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTAHSLAS*LLPPPY Trigger: ATATGGAGGAGGAAGAAGCCAAGAAGCTAGTGAGTG...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACTTGGAAGAAATAAGCTaGGTTGTCATGTCTGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHLEEIS*VVMSVS Trigger: AGACACAGACATGACAACCCAGCTTATTTCTTCCAA...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR GCA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCCAAGACAGCATTCCTaGGACAATTATCAAAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VGVVCTPSHLELSNHPQHPRQHS*DNYQKK Trigger: TTTCTTTTGATAATTGTCGCAGGAATGCTGTCTTGG...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CCA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCATTCCTCCTCCATATCTaGCCTAAACTTATCTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: GRGGMHPESSRVIQPPTAFLLHI*PKLIFK Trigger: TTTGAAGATAAGTTTAGGCCAGATATGGAGGAGGAA...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CCA 90 bp | CGGCCAGTGGTCAGAGAGTGGAGCTCCAAGTTGGAAGAAATAAGCTaGGTTGTCATGTCTGTGTCTGCAGCTGTCCCAGCACCACAGCAA | + |
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Preference number: 5 (lower is better) Translates to: RPVVREWSSKLEEIS*VVMSVSAAVPAPQQ Trigger: TTGCTGTGGTGCTGGGACAGCTGCAGACACAGACATGACAACCCAGCTTATTTCTTCCAACTTGGAGCTCCACTCTCTGACCACTGGCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACAACCATCCCTTCAGTaGCTCTCGTGTCTGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: GRGGMHPESSRVIQPPTAQPSLQ*LSCLLQ Trigger: TTGGAGCAGACACGAGAGCAACTGAAGGGATGGTTG...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACTTCAAACACAGCCATaGCTGCCAAGGAGCCAGAAC | + |
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Preference number: 5 (lower is better) Translates to: GRGGMHPESSRVIQPPTALQTQP*LPRSQN Trigger: GTTCTGGCTCCTTGGCAGCAATGGCTGTGTTTGAAG...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCAAGCCTGGTCCCTTTCTaGTTGGGCACTGAGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: RGGMHPESSRVIQPPTAPSLVPF*LGTENG Trigger: TCCATTCTCAGTGCCCAACAAGAAAGGGACCAGGCT...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CCA 90 bp | CGATTAGCTGTAACAACTCTCGGGAGGCGGCCAGTGGTCAGAGAGTaGAGCTCCAAGTTGGAAGAAATAAGCTGGGTTGTCATGTCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RLAVTTLGRRPVVRE*SSKLEEISWVVMSV Trigger: CACAGACATGACAACCCAGCTTATTTCTTCCAACTTGGAGCTCCACTCTCTGACCACTGGCCGCCTCCCGAGAGTTGTTACAGCTAATCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | GGTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCAGAGTGGAGCTCCAAGTaGGAAGAAATAAGCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GRGGMHPESSRVIQPPTAEWSSK*EEISWV Trigger: AACCCAGCTTATTTCTTCCAACTTGGAGCTCCACTC...TGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACACACACAGATCAATGTaGCTTCCAGACCCCAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: VGVVCTPSHLELSNHPQHTHRSM*LPDPKS Trigger: TGACTTGGGGTCTGGAAGCAACATTGATCTGTGTGT...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | GTAGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCGAAGAAAGTCCAGCTaGCTCTTGCTGATAACACAC | + |
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Preference number: 5 (lower is better) Translates to: VGVVCTPSHLELSNHPQHRRKSS*LLLITH Trigger: GTGTGTTATCAGCAAGAGCAAGCTGGACTTTCTTCG...GTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCATGCACCAATGTAACCTaGATACCTGAAGAGCATCTG | + |
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Preference number: 5 (lower is better) Translates to: RGGMHPESSRVIQPPTAPCTNVT*IPEEHL Trigger: CAGATGCTCTTCAGGTATCAAGGTTACATTGGTGCA...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS-3UTR CAA 90 bp | AGGGGTGGTATGCACCCCGAGTCATCTAGAGTTATCCAACCACCCACAGCACCAAAGTCCAGCTTGCTCTaGCTGATAACACACAGATCA | + |
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Preference number: 5 (lower is better) Translates to: RGGMHPESSRVIQPPTAPKSSLL*LITHRS Trigger: TGATCTGTGTGTTATCAGCAAGAGCAAGCTGGACTT...TGGTGCTGTGGGTGGTTGGATAACTCTAGATGACTCGGGGTGCATACCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS GCA 90 bp | ACAGTTTTTGTCAGCAACAACCATCCCTTCAGTTGCTCTCGTGTCTaGTCCAAGAACTATGCCATCCTTATACACCACCCCCGCGATGGT | + |
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Preference number: 5 (lower is better) Translates to: TVFVSNNHPFSCSRV*SKNYAILIHHPRDG Trigger: ACCATCGCGGGGGTGGTGTATAAGGATGGCATAGTTCTTGGAGCAGACACGAGAGCAACTGAAGGGATGGTTGTTGCTGACAAAAACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 90 bp | ACAACTCTCGGGAGGCGGCCAGTGGTCAGAGAGTGGAGCTCCAAGTaGGAAGAAATAAGCTGGGTTGTCATGTCTGTGTCTGCAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: TTLGRRPVVREWSSK*EEISWVVMSVSAAV Trigger: GACAGCTGCAGACACAGACATGACAACCCAGCTTATTTCTTCCAACTTGGAGCTCCACTCTCTGACCACTGGCCGCCTCCCGAGAGTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CCA 72 bp | GTAACAACTCTCGGGAGGCGGCCAGTGGTCAGAGAGTaGAGCTCCAAGTTGGAAGAAATAAGCTGGGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: VTTLGRRPVVRE*SSKLEEISWVV Trigger: GACAACCCAGCTTATTTCTTCCAACTTGGAGCTCCACTCTCTGACCACTGGCCGCCTCCCGAGAGTTGTTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CCA 72 bp | CACATCTGTACCGGCCAAGCCTGGTCCCTTTCTTGTTaGGCACTGAGAATGGACGAAGAAAGTCCAGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: HICTGQAWSLSC*ALRMDEESPAC Trigger: GCAAGCTGGACTTTCTTCGTCCATTCTCAGTGCCCAACAAGAAAGGGACCAGGCTTGGCCGGTACAGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 90 bp | GTGCCTTTCTCACATCTGTACCGGCCAAGCCTGGTCCCTTTCTTGTaGGGCACTGAGAATGGACGAAGAAAGTCCAGCTTGCTCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: VPFSHLYRPSLVPFL*GTENGRRKSSLLLL Trigger: CAGCAAGAGCAAGCTGGACTTTCTTCGTCCATTCTCAGTGCCCAACAAGAAAGGGACCAGGCTTGGCCGGTACAGATGTGAGAAAGGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 72 bp | TCACATCTGTACCGGCCAAGCCTGGTCCCTTTCTTGTaGGGCACTGAGAATGGACGAAGAAAGTCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SHLYRPSLVPFL*GTENGRRKSSL Trigger: CAAGCTGGACTTTCTTCGTCCATTCTCAGTGCCCAACAAGAAAGGGACCAGGCTTGGCCGGTACAGATGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 90 bp | GTCCCTTTCTTGTTGGGCACTGAGAATGGACGAAGAAAGTCCAGCTaGCTCTTGCTGATAACACACAGATCAATGTTGCTTCCAGACCCC | + |
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Preference number: 6 (lower is better) Translates to: VPFLLGTENGRRKSS*LLLITHRSMLLPDP Trigger: GGGGTCTGGAAGCAACATTGATCTGTGTGTTATCAGCAAGAGCAAGCTGGACTTTCTTCGTCCATTCTCAGTGCCCAACAAGAAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS GCA 72 bp | CATATCTGGCCTAAACTTATCTTCAAACACAGCCATTaGTGCCAAGGAGCCAGAACCCATGGTGACATAAGG | + |
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Preference number: 6 (lower is better) Translates to: HIWPKLIFKHSH*CQGARTHGDIR Trigger: CCTTATGTCACCATGGGTTCTGGCTCCTTGGCAGCAATGGCTGTGTTTGAAGATAAGTTTAGGCCAGATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 72 bp | GGCACTGAGAATGGACGAAGAAAGTCCAGCTTGCTCTaGCTGATAACACACAGATCAATGTTGCTTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: GTENGRRKSSLL*LITHRSMLLPD Trigger: GTCTGGAAGCAACATTGATCTGTGTGTTATCAGCAAGAGCAAGCTGGACTTTCTTCGTCCATTCTCAGTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 72 bp | TTGAACAGTTTTTGTCAGCAACAACCATCCCTTCAGTaGCTCTCGTGTCTGCTCCAAGAACTATGCCATCCT | + |
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Preference number: 6 (lower is better) Translates to: LNSFCQQQPSLQ*LSCLLQELCHP Trigger: AGGATGGCATAGTTCTTGGAGCAGACACGAGAGCAACTGAAGGGATGGTTGTTGCTGACAAAAACTGTTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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| CDS CAA 72 bp | TTGTTGGGCACTGAGAATGGACGAAGAAAGTCCAGCTaGCTCTTGCTGATAACACACAGATCAATGTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LLGTENGRRKSS*LLLITHRSMLL Trigger: AAGCAACATTGATCTGTGTGTTATCAGCAAGAGCAAGCTGGACTTTCTTCGTCCATTCTCAGTGCCCAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028083.6 |
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