Pregenerated sensors for PSMB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014769Ensembl transcript IDs: ENSMUST00000014913.11, ENSMUST00000231341.2, ENSMUST00000232500.2
Found 137 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAATGGCTGCAGACAGAGCCTATAGAGCCATGGGCAGCTGAGGACTaGAGGGCACTGACAGAGCAGAGAAAAGAGCGGCGTCAGAAGACC | + |
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Preference number: 1 (lower is better) Translates to: QWLQTEPIEPWAAED*RALTEQRKERRQKT Trigger: GGTCTTCTGACGCCGCTCTTTTCTCTGCTCTGTCAGTGCCCTTCAGTCCTCAGCTGCCCATGGCTCTATAGGCTCTGTCTGCAGCCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 90 bp | AGCGCGAGATCAGATAGGAGAAGGCAGAGTGTGGCACAGGTGAGATaGACACACAGCAGCAGAAAGCAAGGCACAGGAACCACAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SARSDRRRQSVAQVR*THSSRKQGTGTTGS Trigger: GCTGCCTGTGGTTCCTGTGCCTTGCTTTCTGCTGCTGTGTGTTCATCTCACCTGTGCCACACTCTGCCTTCTCCTATCTGATCTCGCGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 90 bp | ACTAAAGCGCGAGATCAGATAGGAGAAGGCAGAGTGTGGCACAGGTaGGATGAACACACAGCAGCAGAAAGCAAGGCACAGGAACCACAG | + |
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Preference number: 1 (lower is better) Translates to: TKARDQIGEGRVWHR*DEHTAAESKAQEPQ Trigger: CTGTGGTTCCTGTGCCTTGCTTTCTGCTGCTGTGTGTTCATCTCACCTGTGCCACACTCTGCCTTCTCCTATCTGATCTCGCGCTTTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 90 bp | CTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTaGAGCCAACCTGGAGAGACAGAAACTCACATGGAGCATCACGTG | + |
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Preference number: 1 (lower is better) Translates to: LCPASGGRALHSAYF*SQPGETETHMEHHV Trigger: CACGTGATGCTCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR GCA 90 bp | AGCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTaGATATTTTTGAAGCCAACCTGGAGAGACAGAAACTCACATGGA | + |
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Preference number: 1 (lower is better) Translates to: SLMALSSVRGTCSTF*IFLKPTWRDRNSHG Trigger: TCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR GCA 90 bp | ACATCTTTCACCAGCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTaGTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: TSFTSLMALSSVRGT*STFCIFLKPTWRDR Trigger: TCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGCTGGTGAAAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 90 bp | CAGGCAGCACGGATTGGGTTACTGAGCTTGGAGGCTGAAGGCCTCTaGGAAAACCCAATAAACGCAGGTCTGGATCAAGGTGGTATTAAA | + |
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Preference number: 1 (lower is better) Translates to: QAARIGLLSLEAEGL*ENPINAGLDQGGIK Trigger: TTTAATACCACCTTGATCCAGACCTGCGTTTATTGGGTTTTCTCAGAGGCCTTCAGCCTCCAAGCTCAGTAACCCAATCCGTGCTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 90 bp | GGCCCCAACCTCCCACAGCATACAACATCCCCATGTCCCAGGATTTaGATTGGATGTATCAAGTCACATCAGGATGTCTTCCAGTTTAAG | + |
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Preference number: 1 (lower is better) Translates to: GPNLPQHTTSPCPRI*IGCIKSHQDVFQFK Trigger: CTTAAACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGACATGGGGATGTTGTATGCTGTGGGAGGTTGGGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 90 bp | TCAGAACTCAAGCTGTCAGGCTTGGTGGCAAACACCTTCACCCACTaGGCCACCTCCTTAGTCCCACTTTCCTTATTCTTAAAATACAAA | + |
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Preference number: 1 (lower is better) Translates to: SELKLSGLVANTFTH*ATSLVPLSLFLKYK Trigger: TTTGTATTTTAAGAATAAGGAAAGTGGGACTAAGGAGGTGGCTCAGTGGGTGAAGGTGTTTGCCACCAAGCCTGACAGCTTGAGTTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR GCA 90 bp | TTCTCATTCCAATCCAGGAGTCAACACCATCCTCTGGCTTCTGTGTaGATACGGACACATGATTACACACATACACACACACACACACAA | + |
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Preference number: 1 (lower is better) Translates to: FSFQSRSQHHPLASV*IRTHDYTHTHTHTQ Trigger: TTGTGTGTGTGTGTGTGTATGTGTGTAATCATGTGTCCGTATGCACACAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGAATGAGAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR GCA 90 bp | TCCTGGACACATACCCAAAGAAACTTATATCCCAGTAGAGATACTTaGATGTCCACATGTATTCAAAATAGTGTATGTAAGTGTGGATGT | + |
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Preference number: 1 (lower is better) Translates to: SWTHTQRNLYPSRDT*MSTCIQNSVCKCGC Trigger: ACATCCACACTTACATACACTATTTTGAATACATGTGGACATGCAAGTATCTCTACTGGGATATAAGTTTCTTTGGGTATGTGTCCAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR-3UTR TCA 90 bp | GCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTGGGCAGCTGAGGACTaGAGGGCACTGACAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASWLCPASGGRALHSAYFWAAED*RALTEQ Trigger: CTGCTCTGTCAGTGCCCTTCAGTCCTCAGCTGCCCA...AAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCCAGCTCTAAGGGAACTGACGCCTGCTTCTGGCTTCCCTGGGCACCTGCACATGCACGTGGCACATaGTCACGGAAACACACACAT | + |
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Preference number: 2 (lower is better) Translates to: NSSSKGTDACFWLPWAPAHARGT*SRKHTH Trigger: ATGTGTGTGTTTCCGTGAGCATGTGCCACGTGCATG...TGCAGGTGCCCAGGGAAGCCAGAAGCAGGCGTCAGTTCCCTTAGAGCTGGAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCCGCAGGGGAACAGTTTCCTCCCTGATGCCCTCTTTGGTCACGATGCAGGTGGCACAGGTGAGATaGACACACAGCAGCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: SFRRGTVSSLMPSLVTMQVAQVR*THSSRK Trigger: CTTTCTGCTGCTGTGTGTTCATCTCACCTGTGCCAC...CTGCATCGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTCCCCTGCGGAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR CAA 90 bp | GCTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTaGAAGCCAACCTGGAGAGACAGAAACTCACATGGAGCATCACGT | + |
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Preference number: 2 (lower is better) Translates to: ALSSVRGTCSTFCIF*KPTWRDRNSHGASR Trigger: ACGTGATGCTCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGCAAGTCTGTGGGATGTTTTCCAGATTAATGCTTGATGTAGGAGGCCCCGGGATAAGCGAGACATaGCCAATGGCTGCAGACAGA | + |
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Preference number: 2 (lower is better) Translates to: CRQVCGMFSRLMLDVGGPGISET*PMAADR Trigger: TCTGTCTGCAGCCATTGGTCATGTCTCGCTTATCCC...GGGGCCTCCTACATCAAGCATTAATCTGGAAAACATCCCACAGACTTGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGACAGAACTGAGCTTGGAGGCTaGAGGCCTCTGAGAAAACCC | + |
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Preference number: 2 (lower is better) Translates to: RGTCSTFCIFLKPTWRDRTELGG*RPLRKP Trigger: GGGTTTTCTCAGAGGCCTTCAGCCTCCAAGCTCAGT...TCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGGACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGACAGACCCACTGTGGGCAGGTaGGTAAGGAAGCAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RGTCSTFCIFLKPTWRDRPTVGR*VRKQFE Trigger: CTCAAACTGCTTCCTTACTCACCTGCCCACAGTGGG...TCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR GCA 90 bp | CCACAGAGATCCAAGGGTCAGAACTCAAGCTGTCAGGCTTGGTGGCAAACACCTTTGTATGTGGGTATTTaGATGTGCCTGTCGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PQRSKGQNSSCQAWWQTPLYVGI*MCLSRP Trigger: TGGCCTCGACAGGCACATGCAAATACCCACATACAA...AGGTGTTTGCCACCAAGCCTGACAGCTTGAGTTCTGACCCTTGGATCTCTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR-3UTR CCA 90 bp | CGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGAATGTCTCCACAAGACTaGCCTGCAGGCAAGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RQGDVLYILHIFEANLERMSPQD*PAGKSV Trigger: CACAGACTTGCCTGCAGGCCAGTCTTGTGGAGACAT...TCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTGAAGCCAACCTGGAGAGACAGAAACTCACATGGAGCATCACGTGTCCCAGGACTGAAGGGCACTaGCAGAGCAGAGAAAAGAGC | + |
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Preference number: 2 (lower is better) Translates to: IFEANLERQKLTWSITCPRTEGH*QSREKS Trigger: GCTCTTTTCTCTGCTCTGTCAGTGCCCTTCAGTCCT...GGGACACGTGATGCTCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTGAAGGAGGCATTGTGTaGTGTAAGGTAAGATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: ASWLCPASGGRALHSAYFEGGIV*CKVRWH Trigger: ATGCCATCTTACCTTACATCACACAATGCCTCCTTC...AAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTCCGCAGGGGAACAGTTTCCTCCCTGATGCCCTCTTTGGTCACGATGCAGCATTCTGCATATTTTTaGAGCCAACCTGGAGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SFRRGTVSSLMPSLVTMQHSAYF*SQPGET Trigger: TGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATG...CTGCATCGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTCCCCTGCGGAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR GCA 90 bp | CGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGATTCCTTCAGGGTCTCTaGTTCAGTTCCTGCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: RQGDVLYILHIFEANLERFLQGL*FSSCLN Trigger: GTTGAGGCAGGAACTGAAGCAGAGACCCTGAAGGAA...TCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGAGATCCAAGGGTCAGAACTCAAGCTGTCAGGCTTGGTGGCAAACACCTAACTGGAGTTACAGGTaGGTGCTAGGAATCAAACTT | + |
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Preference number: 2 (lower is better) Translates to: PQRSKGQNSSCQAWWQTPNWSYR*VLGIKL Trigger: AAGTTTGATTCCTAGCACCCACCTGTAACTCCAGTT...AGGTGTTTGCCACCAAGCCTGACAGCTTGAGTTCTGACCCTTGGATCTCTGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR CAA 90 bp | GGATCAAAACTAGGAGAAGGCACTGAACTACAAGAGCATCAAACATaGCTAACTAAAGCGCGAGATCAGATAGGAGAAGGCAGAGTGTGG | + |
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Preference number: 2 (lower is better) Translates to: GSKLGEGTELQEHQT*LTKARDQIGEGRVW Trigger: CCACACTCTGCCTTCTCCTATCTGATCTCGCGCTTTAGTTAGCAATGTTTGATGCTCTTGTAGTTCAGTGCCTTCTCCTAGTTTTGATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | CAATATATGACCCGCATGTCAGTCTTTCCGCAGGGGAACAGTTTCCTCCCTGATGCTCTTAAACTGAAATaGACTGAGTTTCTTCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: QYMTRMSVFPQGNSFLPDALKLK*TEFLPQ Trigger: TTGGGGAAGAAACTCAGTTCATTTCAGTTTAAGAGC...ATCAGGGAGGAAACTGTTCCCCTGCGGAAAGACTGACATGCGGGTCATATATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR GCA 90 bp | CCATATAGGGTTTCTCATTCCAATCCAGGAGTCAACACCATCCTCTGGCTTCTGCTTCCCAATTTGCCATaGTTAGAGAAGACACAGTGT | + |
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Preference number: 2 (lower is better) Translates to: PYRVSHSNPGVNTILWLLLPNLP*LEKTQC Trigger: ACACTGTGTCTTCTCTAAGCATGGCAAATTGGGAAG...CAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGAATGAGAAACCCTATATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR-3UTR GCA 90 bp | ATTTTTGAAGCCAACCTGGAGAGACAGAAACTCACATGGAGCATCACGTGTCCCGTTTCTTCCCCAAGTTaGTTTTGGTCATGGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: IFEANLERQKLTWSITCPVSSPS*FWSWYS Trigger: AGAGTACCATGACCAAAAGCAACTTGGGGAAGAAAC...GGGACACGTGATGCTCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR CAA 90 bp | CCAACCTCCCACAGCATACAACATCCCCATGTCCCAGGATTTGAATaGGATGTATCAAGTCACATCAGGATGTCTTCCAGTTTAAGGATA | + |
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Preference number: 2 (lower is better) Translates to: PTSHSIQHPHVPGFE*DVSSHIRMSSSLRI Trigger: TATCCTTAAACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGACATGGGGATGTTGTATGCTGTGGGAGGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR-3UTR TCA 90 bp | ATATGCATGCACGTGGCACATGCTCACGGAAACACACACATGATGAAAAGTAAACCATACTTTTTAAACTaGGAGTTGTCTCTCCGACCC | + |
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Preference number: 2 (lower is better) Translates to: ICMHVAHAHGNTHMMKSKPYFLN*ELSLRP Trigger: GGGTCGGAGAGACAACTCTCAGTTTAAAAAGTATGG...TTTACTTTTCATCATGTGTGTGTTTCCGTGAGCATGTGCCACGTGCATGCATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR-3UTR CCA 90 bp | GTCCCAGGATTTGAATTGGATGTATCAAGTCACATCAGGATGTCTTCCAGTTTAAGTTGCTTTTGGTCATaGTACTCTTATAATGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: VPGFELDVSSHIRMSSSLSCFWS*YSYNGS Trigger: ACTGCCATTATAAGAGTACCATGACCAAAAGCAACT...TAAACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR GCA 72 bp | AGCTCCTGTAACTCCAGCTCTAAGGGAACTGACGCCTaGTTCTGGCTTCCCTGGGCACCTGCATACCCTGTT | + |
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Preference number: 3 (lower is better) Translates to: SSCNSSSKGTDA*FWLPWAPAYPV Trigger: AACAGGGTATGCAGGTGCCCAGGGAAGCCAGAAGCAGGCGTCAGTTCCCTTAGAGCTGGAGTTACAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR TCA 72 bp | AGGCACAGGAACCACAGGCAGCACGGATTGGGTTACTaGGCTTGGAGGCTGAAGGCCTCTGAGAAAACCCAA | + |
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Preference number: 3 (lower is better) Translates to: RHRNHRQHGLGY*AWRLKASEKTQ Trigger: TTGGGTTTTCTCAGAGGCCTTCAGCCTCCAAGCTCAGTAACCCAATCCGTGCTGCCTGTGGTTCCTGTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR CCA 72 bp | GTGCCTGTCGAGGCCAGAAGAGGACACTGTAGCCCCTaGAACTGGAGTTACAGGTGGGTGCTAGGAATCAAA | + |
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Preference number: 3 (lower is better) Translates to: VPVEARRGHCSP*NWSYRWVLGIK Trigger: TTTGATTCCTAGCACCCACCTGTAACTCCAGTTCCAGGGGCTACAGTGTCCTCTTCTGGCCTCGACAGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
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| 3UTR CCA 72 bp | CAGAGATCCAAGGGTCAGAACTCAAGCTGTCAGGCTTaGTGGCAAACACCTTCACCCACTGAGCCACCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QRSKGQNSSCQA*WQTPSPTEPPP Trigger: AGGAGGTGGCTCAGTGGGTGAAGGTGTTTGCCACCAAGCCTGACAGCTTGAGTTCTGACCCTTGGATCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR TCA 72 bp | ATGGCTGCAGACAGAGCCTATAGAGCCATGGGCAGCTaGGGACTGAAGGGCACTGACAGAGCAGAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: MAADRAYRAMGS*GLKGTDRAEKR Trigger: TCTTTTCTCTGCTCTGTCAGTGCCCTTCAGTCCTCAGCTGCCCATGGCTCTATAGGCTCTGTCTGCAGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR GCA 72 bp | ACCAGCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTaGTCTACATTCTGCATATTTTTGAAGCCAACCTGG | + |
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Preference number: 3 (lower is better) Translates to: TSLMALSSVRGT*STFCIFLKPTW Trigger: CCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR CCA 72 bp | GTCGAGGCCAGAAGAGGACACTGTAGCCCCTGGAACTaGAGTTACAGGTGGGTGCTAGGAATCAAACTTAGG | + |
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Preference number: 3 (lower is better) Translates to: VEARRGHCSPWN*SYRWVLGIKLR Trigger: CCTAAGTTTGATTCCTAGCACCCACCTGTAACTCCAGTTCCAGGGGCTACAGTGTCCTCTTCTGGCCTCGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
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| 3UTR CCA 72 bp | TGTAACTCCAGCTCTAAGGGAACTGACGCCTGCTTCTaGCTTCCCTGGGCACCTGCATACCCTGTTCACATA | + |
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Preference number: 3 (lower is better) Translates to: CNSSSKGTDACF*LPWAPAYPVHI Trigger: TATGTGAACAGGGTATGCAGGTGCCCAGGGAAGCCAGAAGCAGGCGTCAGTTCCCTTAGAGCTGGAGTTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR TCA 72 bp | ACAGGCAGCACGGATTGGGTTACTGAGCTTGGAGGCTaGAGGCCTCTGAGAAAACCCAATAAACGCAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: TGSTDWVTELGG*RPLRKPNKRRS Trigger: AGACCTGCGTTTATTGGGTTTTCTCAGAGGCCTTCAGCCTCCAAGCTCAGTAACCCAATCCGTGCTGCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR TCA 72 bp | CGAGATCAGATAGGAGAAGGCAGAGTGTGGCACAGGTaGGATGAACACACAGCAGCAGAAAGCAAGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: RDQIGEGRVWHR*DEHTAAESKAQ Trigger: CTGTGCCTTGCTTTCTGCTGCTGTGTGTTCATCTCACCTGTGCCACACTCTGCCTTCTCCTATCTGATCTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR GCA 72 bp | GCTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTaGATATTTTTGAAGCCAACCTGGAGAGACAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: ALSSVRGTCSTF*IFLKPTWRDRN Trigger: GTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR CCA 72 bp | AGAGGACACTGTAGCCCCTGGAACTGGAGTTACAGGTaGGTGCTAGGAATCAAACTTAGGTCCTCTGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: RGHCSPWNWSYR*VLGIKLRSSAR Trigger: TCTTGCAGAGGACCTAAGTTTGATTCCTAGCACCCACCTGTAACTCCAGTTCCAGGGGCTACAGTGTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
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| 3UTR CCA 72 bp | AGCTCTAAGGGAACTGACGCCTGCTTCTGGCTTCCCTaGGCACCTGCATACCCTGTTCACATAAATATGCAT | + |
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Preference number: 3 (lower is better) Translates to: SSKGTDACFWLP*APAYPVHINMH Trigger: ATGCATATTTATGTGAACAGGGTATGCAGGTGCCCAGGGAAGCCAGAAGCAGGCGTCAGTTCCCTTAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR TCA 72 bp | AAGCTGTCAGGCTTGGTGGCAAACACCTTCACCCACTaGGCCACCTCCTTAGTCCCACTTTCCTTATTCTTA | + |
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Preference number: 3 (lower is better) Translates to: KLSGLVANTFTH*ATSLVPLSLFL Trigger: TAAGAATAAGGAAAGTGGGACTAAGGAGGTGGCTCAGTGGGTGAAGGTGTTTGCCACCAAGCCTGACAGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
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| 3UTR TCA 72 bp | GCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTaGAGCCAACCTGGAGAGACAGAAACTCACATGGAG | + |
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Preference number: 3 (lower is better) Translates to: ASGGRALHSAYF*SQPGETETHME Trigger: CTCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
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| 3UTR CCA 72 bp | GGTTATCTAGGAGCTGAGAACATGTCTCCACAAGACTaGCCTGCAGGCAAGTCTGTGGGATGTTTTCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GYLGAENMSPQD*PAGKSVGCFPD Trigger: ATCTGGAAAACATCCCACAGACTTGCCTGCAGGCCAGTCTTGTGGAGACATGTTCTCAGCTCCTAGATAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCAGGCAAGTCTGTGGGATGTTTTCCAGATTAATGCTTGATGTAGGAGGCCCCAGTTTCTTCCCCAAGTaGCTTTTGGTCATGGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: CRQVCGMFSRLMLDVGGPSFFPK*LLVMVL Trigger: GAGTACCATGACCAAAAGCAACTTGGGGAAGAAACT...GGGGCCTCCTACATCAAGCATTAATCTGGAAAACATCCCACAGACTTGCCTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR CCA 72 bp | GTTTCTCATTCCAATCCAGGAGTCAACACCATCCTCTaGCTTCTGTGTGCATACGGACACATGATTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: VSHSNPGVNTIL*LLCAYGHMITH Trigger: GTGTGTAATCATGTGTCCGTATGCACACAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGAATGAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| 3UTR TCA 72 bp | CTCCCACAGCATACAACATCCCCATGTCCCAGGATTTaGATTGGATGTATCAAGTCACATCAGGATGTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPQHTTSPCPRI*IGCIKSHQDVF Trigger: GAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGACATGGGGATGTTGTATGCTGTGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR CCA 72 bp | ACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTaGAGAGACAGAAACTCACATGGAGCATCACGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: TCSTFCIFLKPT*RDRNSHGASRV Trigger: GACACGTGATGCTCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR-3UTR CAA 90 bp | CCATATAGGGTTTCTCATTCCAATCCAGGAGTCAACACCATCCTCTGGCTTCTGGAAATTCTTCCCAATTaGCCATGCTTAGAGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PYRVSHSNPGVNTILWLLEILPN*PCLEKT Trigger: TGTCTTCTCTAAGCATGGCAAATTGGGAAGAATTTC...CAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGAATGAGAAACCCTATATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| 3UTR TCA 72 bp | ACACCATCCTCTGGCTTCTGTGTGCATACGGACACATaGTTACACACATACACACACACACACACAAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: TPSSGFCVHTDT*LHTYTHTHTNL Trigger: AAGATTTGTGTGTGTGTGTGTGTATGTGTGTAATCATGTGTCCGTATGCACACAGAAGCCAGAGGATGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| 3UTR TCA 72 bp | AACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTaGGAGTTGTCTCTCCGACCCCTAAGGAAGAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: NLGPLQEPYFLN*ELSLRPLRKKF Trigger: GAATTTCTTCCTTAGGGGTCGGAGAGACAACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| 3UTR GCA 72 bp | TCTAGTCCCAGCTTAAATACAACAGAAATGGGGCAATaGTCCCAATTTCTCAAAAGCACAAACACATGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSPSLNTTEMGQ*SQFLKSTNTWR Trigger: CCTCCATGTGTTTGTGCTTTTGAGAAATTGGGAGCATTGCCCCATTTCTGTTGTATTTAAGCTGGGACTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR CCA 72 bp | ACAGCATACAACATCCCCATGTCCCAGGATTTGAATTaGATGTATCAAGTCACATCAGGATGTCTTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: TAYNIPMSQDLN*MYQVTSGCLPV Trigger: AACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGACATGGGGATGTTGTATGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCAGGATTTGAATTGGATGTATCAAGTCACATCAGGATGTCTTCCAGTTTACAAGAGCATCAAACATaGCTAACTAAAGCGCGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: VPGFELDVSSHIRMSSSLQEHQT*LTKARD Trigger: ATCTCGCGCTTTAGTTAGCAATGTTTGATGCTCTTG...TAAACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| 3UTR CCA 72 bp | AAAAACAGGTTTTATAGGACCCAGCTATACCATTCCTaGACACATACCCAAAGAAACTTATATCCCAGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KNRFYRTQLYHS*THTQRNLYPSR Trigger: TCTACTGGGATATAAGTTTCTTTGGGTATGTGTCCAGGAATGGTATAGCTGGGTCCTATAAAACCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| 3UTR GCA 72 bp | CATACCCAAAGAAACTTATATCCCAGTAGAGATACTTaGATGTCCACATGTATTCAAAATAGTGTATGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: HTQRNLYPSRDT*MSTCIQNSVCK Trigger: CTTACATACACTATTTTGAATACATGTGGACATGCAAGTATCTCTACTGGGATATAAGTTTCTTTGGGTATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR GCA 90 bp | CGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGAGGCGAAAACCGCAGCTaGACAGGGCCGGCGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RQGDVLYILHIFEANLERGENRS*TGPAEP Trigger: CGGCTCCGCCGGCCCTGTGCAGCTGCGGTTTTCGCC...TCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCGCAGAGGCTGCAGCATaGCACTTGCTGAGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGTCIPCSHKYACTWHMLAEAAA*HLLSLP Trigger: CGGGAGGCTCAGCAAGTGCCATGCTGCAGCCTCTGC...GAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGTGCCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGCACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCCTTTCACCAGCCTCATaGCTCTGTCCAGCGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGTCIPCSHKYACTWHMLLSPAS*LCPASG Trigger: CCCTGACGCTGGACAGAGCCATGAGGCTGGTGAAAG...GAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGTGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR TCA 90 bp | ACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCACGGAACAGCATGGCACTTGCTaGGCCTCCCGCCTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TCIPCSHKYACTWHMLTEQHGTC*ASRLER Trigger: TCTTTCAAGGCGGGAGGCTCAGCAAGTGCCATGCTG...TTCCGTGAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR TCA 90 bp | TCCAATCCAGGAGTCAACACCATCCTCTGGCTTCTGTGTGCATACGGACACATGGAACAGTTTCCTCCCTaGTGCCCTCTTTGGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SNPGVNTILWLLCAYGHMEQFPP*CPLWSR Trigger: TCGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTC...CATGTGTCCGTATGCACACAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR GCA 90 bp | AACTCCAGCTCTAAGGGAACTGACGCCTGCTTCTGGCTTCCCTGGGCACCTGCAATCTTCTCCAGCAATTaGCAATACAGTACCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSSSKGTDACFWLPWAPAIFSSN*QYSTSV Trigger: AACGGAGGTACTGTATTGGCAATTGCTGGAGAAGAT...TGCAGGTGCCCAGGGAAGCCAGAAGCAGGCGTCAGTTCCCTTAGAGCTGGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | CAGGAACCACAGGCAGCACGGATTGGGTTACTGAGCTTGGAGGCTGAAGGCCTCTGTCTGAAGCGACGATaGAAAAATCTTCTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QEPQAARIGLLSLEAEGLCLKRR*KNLLQQ Trigger: TTGCTGGAGAAGATTTTTCCATCGTCGCTTCAGACA...GAGGCCTTCAGCCTCCAAGCTCAGTAACCCAATCCGTGCTGCCTGTGGTTCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | CCACAGAGATCCAAGGGTCAGAACTCAAGCTGTCAGGCTTGGTGGCAAACACCTTCGCCCCCGTTGTCATaGCCTTGTTATTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQRSKGQNSSCQAWWQTPSPPLS*PCYWNA Trigger: AGCATTCCAATAACAAGGCCATGACAACGGGGGCGA...AGGTGTTTGCCACCAAGCCTGACAGCTTGAGTTCTGACCCTTGGATCTCTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR TCA 90 bp | CAGGAACCACAGGCAGCACGGATTGGGTTACTGAGCTTGGAGGCTGAAGGCCTCATCTCGGGTATGAATTaGAAATCCTTCACTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: QEPQAARIGLLSLEAEGLISGMN*KSFTQS Trigger: CGATTGAGTGAAGGATTTTCAATTCATACCCGAGAT...GAGGCCTTCAGCCTCCAAGCTCAGTAACCCAATCCGTGCTGCCTGTGGTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAACAGTTTCCTCCCTGATGCCCTCTTTGGTCACGATGCAGATCCTGAGGGGCTATCTCGGGTATaGATTGAAAATCCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QGNSFLPDALFGHDADPEGLSRV*IENPSL Trigger: GAGTGAAGGATTTTCAATTCATACCCGAGATAGCCC...CTCAGGATCTGCATCGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTTAAATACAACAGAAATGGGGCAATGCTCCCAATTTCTCAAAAGCACGCAGAGGCTGCAGCATaGCACTTGCTGAGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQLKYNRNGAMLPISQKHAEAAA*HLLSLP Trigger: CGGGAGGCTCAGCAAGTGCCATGCTGCAGCCTCTGC...GTGCTTTTGAGAAATTGGGAGCATTGCCCCATTTCTGTTGTATTTAAGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | CGTCAGGGGGACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGAAGCAGAATGAGAAACTaGAGGCTACCACAGCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQGDVLYILHIFEANLERSRMRN*RLPQLP Trigger: GGGCAGCTGTGGTAGCCTCCAGTTTCTCATTCTGCT...TCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR TCA 90 bp | GACGTGCTCTACATTCTGCATATTTTTGAAGCCAACCTGGAGAGACAGAAACTCCAGCATGGCACTTGCTaGGCCTCCCGCCTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVLYILHIFEANLERQKLQHGTC*ASRLER Trigger: TCTTTCAAGGCGGGAGGCTCAGCAAGTGCCATGCTG...GAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTTTAATAAAACAAACTTGTGCCACAGCTCCAATATATGACCCGCATGGCGAAAACCGCAGCTaGACAGGGCCGGCGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIKQTCATAPIYDPHGENRS*TGPAEP Trigger: CGGCTCCGCCGGCCCTGTGCAGCTGCGGTTTTCGCC...ATGCGGGTCATATATTGGAGCTGTGGCACAAGTTTGTTTTATTAAAAAGAATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS-3UTR GCA 90 bp | ACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCACGGAAGATGGTAGACAGCATTaGAGCAATCGCCCCCGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TCIPCSHKYACTWHMLTEDGRQH*SNRPRC Trigger: ACAACGGGGGCGATTGCTGCAATGCTGTCTACCATC...TTCCGTGAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAAATGGGGCAATGCTCCCAATTTCTCAAAAGCACAAACACATGGAGGCAGCTGGTAAGAGCCCACTaGGTCAAAGCTGTACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEMGQCSQFLKSTNTWRQLVRAH*VKAVHS Trigger: GCTGTGTACAGCTTTGACCCAGTGGGCTCTTACCAG...CTGCCTCCATGTGTTTGTGCTTTTGAGAAATTGGGAGCATTGCCCCATTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTGCAGAGGCTGCAGCATaGCACTTGCTGAGCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LGIKLRSSARAILFKLRVAEAAA*HLLSLP Trigger: CGGGAGGCTCAGCAAGTGCCATGCTGCAGCCTCTGC...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| 3UTR CAA 72 bp | AGCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTaGAAGCCAACCTGGAGAGACAGAAACTCACATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVRGTCSTFCIF*KPTWRDRNSHG Trigger: TCCATGTGAGTTTCTGTCTCTCCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGCTTCTGGCTTCCCTGGGCACCTGCATACCCTGTTCACATAAATATGCATCATTCTGCATATTTTTaGAGCCAACCTGGTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ACFWLPWAPAYPVHINMHHSAYF*SQPGCR Trigger: TCGACAACCAGGTTGGCTTCAAAAATATGCAGAATG...ATGCATATTTATGTGAACAGGGTATGCAGGTGCCCAGGGAAGCCAGAAGCAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR TCA 90 bp | AGAGTTGTCTCTCCGACCCCTAAGGAAGAAATTCTTCCCAATTTGCCATGCTTAGAACAGTTTCCTCCCTaGTGCCCTCTTTGGTCACGA | + |
|
Preference number: 4 (lower is better) Translates to: RVVSPTPKEEILPNLPCLEQFPP*CPLWSR Trigger: TCGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTC...TAAGCATGGCAAATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGACAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTTTTAATAAAACAAACTTGTGCCACAGCTCCAATATATGACCCGCATGGAGGCTACCACAGCTaGCCACGCTGCCACAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIKQTCATAPIYDPHGGYHS*PRCHRQ Trigger: CTGCCTGTGGCAGCGTGGGCAGCTGTGGTAGCCTCC...ATGCGGGTCATATATTGGAGCTGTGGCACAAGTTTGTTTTATTAAAAAGAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTGTCTCTCCGACCCCTAAGGAAGAAATTCTTCCCAATTTGCCATGCTTACTGGTAAGAGCCCACTaGGTCAAAGCTGTACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVVSPTPKEEILPNLPCLLVRAH*VKAVHS Trigger: GCTGTGTACAGCTTTGACCCAGTGGGCTCTTACCAG...TAAGCATGGCAAATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGACAACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR TCA 90 bp | GTCCCAGGATTTGAATTGGATGTATCAAGTCACATCAGGATGTCTTCCAGTTTACTGAGCCTCCCGCCTTaGAAGAGTCTCTCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGFELDVSSHIRMSSSLLSLPP*KSLSGK Trigger: CTTACCAGAGAGACTCTTTCAAGGCGGGAGGCTCAG...TAAACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTTAAACTGAGAGTTGTCTCTCCGACCCCTAAGGAAGAAATTCTTCCCAATCTGAGCCTCCCGCCTTaGAAGAGTCTCTCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFKLRVVSPTPKEEILPNLSLPP*KSLSGK Trigger: CTTACCAGAGAGACTCTTTCAAGGCGGGAGGCTCAG...ATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGACAACTCTCAGTTTAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTCAGCATGGCACTTGCTaGGCCTCCCGCCTTGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGIKLRSSARAILFKLRVQHGTC*ASRLER Trigger: TCTTTCAAGGCGGGAGGCTCAGCAAGTGCCATGCTG...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTTGGTGGCAAACACCTTCACCCACTGAGCCACCTCCTTAGTCCCACTTTCTCATGGCCTTGTTATTaGAATGCTTGTACATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLGGKHLHPLSHLLSPTFSWPCY*NACTSL Trigger: TAAAGATGTACAAGCATTCCAATAACAAGGCCATGA...GAAAGTGGGACTAAGGAGGTGGCTCAGTGGGTGAAGGTGTTTGCCACCAAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAACAGTTTCCTCCCTGATGCCCTCTTTGGTCACGATGCAGATCCTGAGTCATGGCCTTGTTATTaGAATGCTTGTACATCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QGNSFLPDALFGHDADPESWPCY*NACTSL Trigger: TAAAGATGTACAAGCATTCCAATAACAAGGCCATGA...CTCAGGATCTGCATCGTGACCAAAGAGGGCATCAGGGAGGAAACTGTTCCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTCTTTCACCAGCCTCATaGCTCTGTCCAGCGTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGIKLRSSARAILFKLRVLSPAS*LCPASG Trigger: CCCTGACGCTGGACAGAGCCATGAGGCTGGTGAAAG...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTCTGAGCCTCCCGCCTTaGAAGAGTCTCTCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGIKLRSSARAILFKLRVLSLPP*KSLSGK Trigger: CTTACCAGAGAGACTCTTTCAAGGCGGGAGGCTCAG...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGACTGGTAAGAGCCCACTaGGTCAAAGCTGTACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGIKLRSSARAILFKLRLVRAH*VKAVHS Trigger: GCTGTGTACAGCTTTGACCCAGTGGGCTCTTACCAG...TCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| 3UTR CAA 72 bp | CCTCCCACAGCATACAACATCCCCATGTCCCAGGATTaGAATTGGATGTATCAAGTCACATCAGGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPTAYNIPMSQD*NWMYQVTSGCL Trigger: AAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGACATGGGGATGTTGTATGCTGTGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCACGGAAATCTCGGGTATGAATTaGAAATCCTTCACTCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: TCIPCSHKYACTWHMLTEISGMN*KSFTQS Trigger: CGATTGAGTGAAGGATTTTCAATTCATACCCGAGAT...TTCCGTGAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR TCA 90 bp | GGACCCAGCTATACCATTCCTGGACACATACCCAAAGAAACTTATATCCCAGTAGGGCTATCTCGGGTATaGATTGAAAATCCTTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: GPSYTIPGHIPKETYIPVGLSRV*IENPSL Trigger: GAGTGAAGGATTTTCAATTCATACCCGAGATAGCCC...TACTGGGATATAAGTTTCTTTGGGTATGTGTCCAGGAATGGTATAGCTGGGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAAATGGGGCAATGCTCCCAATTTCTCAAAAGCACAAACACATGGAGGCAGATCTTCTCCAGCAATTaGCAATACAGTACCTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEMGQCSQFLKSTNTWRQIFSSN*QYSTSV Trigger: AACGGAGGTACTGTATTGGCAATTGCTGGAGAAGAT...CTGCCTCCATGTGTTTGTGCTTTTGAGAAATTGGGAGCATTGCCCCATTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | GTGCTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGATCGCCCCCGTTGTCATaGCCTTGTTATTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGIKLRSSARAILFKLRSPPLS*PCYWNA Trigger: AGCATTCCAATAACAAGGCCATGACAACGGGGGCGA...TCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| 3UTR CAA 72 bp | CACAGCATACAACATCCCCATGTCCCAGGATTTGAATaGGATGTATCAAGTCACATCAGGATGTCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HSIQHPHVPGFE*DVSSHIRMSSS Trigger: ACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGACATGGGGATGTTGTATGCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR TCA 90 bp | ACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCACGGAACATCAAGTCCTCCAATaGTGTTGTAAACATAGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: TCIPCSHKYACTWHMLTEHQVLQ*CCKHSK Trigger: CTTACTATGTTTACAACATCATTGGAGGACTTGATG...TTCCGTGAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | GGACCCAGCTATACCATTCCTGGACACATACCCAAAGAAACTTATATCCCAGTATGTCTGAAGCGACGATaGAAAAATCTTCTCCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPSYTIPGHIPKETYIPVCLKRR*KNLLQQ Trigger: TTGCTGGAGAAGATTTTTCCATCGTCGCTTCAGACA...TACTGGGATATAAGTTTCTTTGGGTATGTGTCCAGGAATGGTATAGCTGGGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| 3UTR CAA 72 bp | GTCTCTCCGACCCCTAAGGAAGAAATTCTTCCCAATTaGCCATGCTTAGAGAAGACACAGTGTAAGAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VSPTPKEEILPN*PCLEKTQCKKM Trigger: CATTTTCTTACACTGTGTCTTCTCTAAGCATGGCAAATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR GCA 90 bp | GGACCCAGCTATACCATTCCTGGACACATACCCAAAGAAACTTATATCCCAGTAACGTGCTCTACATTCTaGATATTTTTGAAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: GPSYTIPGHIPKETYIPVTCSTF*IFLKPT Trigger: GGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGT...TACTGGGATATAAGTTTCTTTGGGTATGTGTCCAGGAATGGTATAGCTGGGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | GTCCCAGGATTTGAATTGGATGTATCAAGTCACATCAGGATGTCTTCCAGTTTATCAGTTTGTAGCATTTaGGGCTATCTCGGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VPGFELDVSSHIRMSSSLSVCSI*GYLGYE Trigger: TTCATACCCGAGATAGCCCCAAATGCTACAAACTGA...TAAACTGGAAGACATCCTGATGTGACTTGATACATCCAATTCAAATCCTGGGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTGTGAGACAATCTCCATaGAAACCACTGCAGCCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LGIKLRSSARAILFKLRVVRQSP*KPLQPI Trigger: AATTGGCTGCAGTGGTTTCCATGGAGATTGTCTCAC...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTTTTAATAAAACAAACTTGTGCCACAGCTCCAATATATGACCCGCATTCGCCCCCGTTGTCATaGCCTTGTTATTGGAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIKQTCATAPIYDPHSPPLS*PCYWNA Trigger: AGCATTCCAATAACAAGGCCATGACAACGGGGGCGA...ATGCGGGTCATATATTGGAGCTGTGGCACAAGTTTGTTTTATTAAAAAGAATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 ENSMUST00000232500.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTCATTCTGCATATTTTTaGAGCCAACCTGGTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGIKLRSSARAILFKLRVHSAYF*SQPGCR Trigger: TCGACAACCAGGTTGGCTTCAAAAATATGCAGAATG...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTTAAACTGAGAGTTGTCTCTCCGACCCCTAAGGAAGAAATTCTTCCCAATACGTGCTCTACATTCTaGATATTTTTGAAGCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LFKLRVVSPTPKEEILPNTCSTF*IFLKPT Trigger: GGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGT...ATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGACAACTCTCAGTTTAAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTTTTAATAAAACAAACTTGTGCCACAGCTCCAATATATGACCCGCATTCAGTTTGTAGCATTTaGGGCTATCTCGGGTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFFLIKQTCATAPIYDPHSVCSI*GYLGYE Trigger: TTCATACCCGAGATAGCCCCAAATGCTACAAACTGA...ATGCGGGTCATATATTGGAGCTGTGGCACAAGTTTGTTTTATTAAAAAGAATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS GCA 90 bp | AACTGGAGGCTACCACAGCTGCCCACGCTGCCACAGGCAGAGCTCTaGTCAAGCACATTACCTGGTTGTCGAGCAGAGGCTGCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: NWRLPQLPTLPQAEL*SSTLPGCRAEAAAW Trigger: CCATGCTGCAGCCTCTGCTCGACAACCAGGTAATGTGCTTGAGCAGAGCTCTGCCTGTGGCAGCGTGGGCAGCTGTGGTAGCCTCCAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CAA 90 bp | AACTCCAGCTCTAAGGGAACTGACGCCTGCTTCTGGCTTCCCTGGGCACCTGCACAGCAATCGCCCCCGTaGTCATGGCCTTGTTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: NSSSKGTDACFWLPWAPAQQSPP*SWPCYW Trigger: CCAATAACAAGGCCATGACAACGGGGGCGATTGCTG...TGCAGGTGCCCAGGGAAGCCAGAAGCAGGCGTCAGTTCCCTTAGAGCTGGAGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS GCA 90 bp | AGCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTGCTCTACATTCTaGATATTTTTGAAGCCAACCTGGTTGTCGAGCAGAGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLMALSSVRGTCSTF*IFLKPTWLSSRGCS Trigger: GCTGCAGCCTCTGCTCGACAACCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS TCA 90 bp | CGATGGAAAAATCTTCTCCAGCAATTGCCAATACAGTACCTCCGTTaGAGGCATAAGGCGAAAACCGCAGCTGCACAGGGCCGGCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RWKNLLQQLPIQYLR*RHKAKTAAAQGRRS Trigger: GCTCCGCCGGCCCTGTGCAGCTGCGGTTTTCGCCTTATGCCTTCAACGGAGGTACTGTATTGGCAATTGCTGGAGAAGATTTTTCCATCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS GCA 90 bp | ACATCTTTCACCAGCCTCATGGCTCTGTCCAGCGTCAGGGGGACGTaGTCTACATTCTGCATATTTTTGAAGCCAACCTGGTTGTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSFTSLMALSSVRGT*STFCIFLKPTWLSS Trigger: GCTCGACAACCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCTGGACAGAGCCATGAGGCTGGTGAAAGATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CAA 90 bp | CAATATATGACCCGCATGTCAGTCTTTCCGCAGGGGAACAGTTTCCTCCCTGATCAGCAATCGCCCCCGTaGTCATGGCCTTGTTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: QYMTRMSVFPQGNSFLPDQQSPP*SWPCYW Trigger: CCAATAACAAGGCCATGACAACGGGGGCGATTGCTG...ATCAGGGAGGAAACTGTTCCCCTGCGGAAAGACTGACATGCGGGTCATATATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CAA 90 bp | TGCAGGCAAGTCTGTGGGATGTTTTCCAGATTAATGCTTGATGTAGGAGGCCCCAAGCACATTACCTGGTaGTCGAGCAGAGGCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CRQVCGMFSRLMLDVGGPKHITW*SSRGCS Trigger: GCTGCAGCCTCTGCTCGACAACCAGGTAATGTGCTT...GGGGCCTCCTACATCAAGCATTAATCTGGAAAACATCCCACAGACTTGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CAA 90 bp | CCATATAGGGTTTCTCATTCCAATCCAGGAGTCAACACCATCCTCTGGCTTCTGTCCCTGATGCCCTCTTaGGTCACGATGCAGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PYRVSHSNPGVNTILWLLSLMPS*VTMQIL Trigger: CAGGATCTGCATCGTGACCAAAGAGGGCATCAGGGA...CAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGAATGAGAAACCCTATATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CAA 90 bp | GGGTCTCTGCTTCAGTTCCTGCCTCAACTTCCCTCCATTACAGAGTACAAGCTCCCCGTTGTCATGGCCTaGTTATTGGAATGCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GSLLQFLPQLPSITEYKLPVVMA*LLECLY Trigger: GTACAAGCATTCCAATAACAAGGCCATGACAACGGG...GAGCTTGTACTCTGTAATGGAGGGAAGTTGAGGCAGGAACTGAAGCAGAGACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGGTGGCAAACACCTTCACCCACTGAGCCACCTCCTTAGTCCCACTTTCACATTCTGCATATTTTaGAAGCCAACCTGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: RLGGKHLHPLSHLLSPTFTFCIF*KPTWLS Trigger: CGACAACCAGGTTGGCTTCAAAAATATGCAGAATGT...GAAAGTGGGACTAAGGAGGTGGCTCAGTGGGTGAAGGTGTTTGCCACCAAGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS TCA 90 bp | AAGTCCTCCAATGATGTTGTAAACATAGTAAGGGAAGAAGCGCCGTaGGTACAGGATGGTAGACAGCATTGCAGCAATCGCCCCCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSSNDVVNIVREEAP*VQDGRQHCSNRPRC Trigger: ACAACGGGGGCGATTGCTGCAATGCTGTCTACCATCCTGTACTCACGGCGCTTCTTCCCTTACTATGTTTACAACATCATTGGAGGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 ENSMUST00000232500.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCACCTGCATACCCTGTTCACATAAATATGCATGCACGTGGCACATGCTCAATCTTCTCCAGCAATaGCCAATACAGTACCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LGTCIPCSHKYACTWHMLNLLQQ*PIQYLR Trigger: ACGGAGGTACTGTATTGGCAATTGCTGGAGAAGATT...GAGCATGTGCCACGTGCATGCATATTTATGTGAACAGGGTATGCAGGTGCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CAA 90 bp | CCACAGAGATCCAAGGGTCAGAACTCAAGCTGTCAGGCTTGGTGGCAAACACCTTATCTCGGGTATGAATaGAAAATCCTTCACTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PQRSKGQNSSCQAWWQTPYLGYE*KILHSI Trigger: GATTGAGTGAAGGATTTTCAATTCATACCCGAGATA...AGGTGTTTGCCACCAAGCCTGACAGCTTGAGTTCTGACCCTTGGATCTCTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CAA 90 bp | TCCAATCCAGGAGTCAACACCATCCTCTGGCTTCTGTGTGCATACGGACACATGGTCATGGCCTTGTTATaGGAATGCTTGTACATCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SNPGVNTILWLLCAYGHMVMALL*ECLYIF Trigger: AAAGATGTACAAGCATTCCAATAACAAGGCCATGAC...CATGTGTCCGTATGCACACAGAAGCCAGAGGATGGTGTTGACTCCTGGATTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014913.11 |
||
| CDS-3UTR CAA 90 bp | GTGCTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGACAGCAATCGCCCCCGTaGTCATGGCCTTGTTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: VLGIKLRSSARAILFKLRQQSPP*SWPCYW Trigger: CCAATAACAAGGCCATGACAACGGGGGCGATTGCTG...TCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS CCA 90 bp | AACCACTGCAGCCAATTACTGTCTTGTCTGTCAGTTTGTAGCATTTaGGGCTATCTCGGGTATGAATTGAAAATCCTTCACTCAATCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NHCSQLLSCLSVCSI*GYLGYELKILHSIE Trigger: CTCGATTGAGTGAAGGATTTTCAATTCATACCCGAGATAGCCCCAAATGCTACAAACTGACAGACAAGACAGTAATTGGCTGCAGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS-3UTR CAA 90 bp | GTGCTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGACCCGTTGTCATGGCCTaGTTATTGGAATGCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VLGIKLRSSARAILFKLRPVVMA*LLECLY Trigger: GTACAAGCATTCCAATAACAAGGCCATGACAACGGG...TCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAGCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTTTAATAAAACAAACTTGTGCCACAGCTCCAATATATGACCCGCATTCCCTGATGCCCTCTTaGGTCACGATGCAGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIKQTCATAPIYDPHSLMPS*VTMQIL Trigger: CAGGATCTGCATCGTGACCAAAGAGGGCATCAGGGA...ATGCGGGTCATATATTGGAGCTGTGGCACAAGTTTGTTTTATTAAAAAGAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAAATGGGGCAATGCTCCCAATTTCTCAAAAGCACAAACACATGGAGGCAGTATCTCGGGTATGAATaGAAAATCCTTCACTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: TEMGQCSQFLKSTNTWRQYLGYE*KILHSI Trigger: GATTGAGTGAAGGATTTTCAATTCATACCCGAGATA...CTGCCTCCATGTGTTTGTGCTTTTGAGAAATTGGGAGCATTGCCCCATTTCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGAATCAAACTTAGGTCCTCTGCAAGAGCCATACTTTTTAAACTGAGAGTTCCCGTTGTCATGGCCTaGTTATTGGAATGCTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGIKLRSSARAILFKLRVPVVMA*LLECLY Trigger: GTACAAGCATTCCAATAACAAGGCCATGACAACGGG...AACTCTCAGTTTAAAAAGTATGGCTCTTGCAGAGGACCTAAGTTTGATTCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTTAAACTGAGAGTTGTCTCTCCGACCCCTAAGGAAGAAATTCTTCCCAATACATTCTGCATATTTTaGAAGCCAACCTGGTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LFKLRVVSPTPKEEILPNTFCIF*KPTWLS Trigger: CGACAACCAGGTTGGCTTCAAAAATATGCAGAATGT...ATTGGGAAGAATTTCTTCCTTAGGGGTCGGAGAGACAACTCTCAGTTTAAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS-3UTR CAA 90 bp | ACATTCTTTTTAATAAAACAAACTTGTGCCACAGCTCCAATATATGACCCGCATAATCTTCTCCAGCAATaGCCAATACAGTACCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: TFFLIKQTCATAPIYDPHNLLQQ*PIQYLR Trigger: ACGGAGGTACTGTATTGGCAATTGCTGGAGAAGATT...ATGCGGGTCATATATTGGAGCTGTGGCACAAGTTTGTTTTATTAAAAAGAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS GCA 72 bp | CTACCACAGCTGCCCACGCTGCCACAGGCAGAGCTCTaGTCAAGCACATTACCTGGTTGTCGAGCAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LPQLPTLPQAEL*SSTLPGCRAEA Trigger: AGCCTCTGCTCGACAACCAGGTAATGTGCTTGAGCAGAGCTCTGCCTGTGGCAGCGTGGGCAGCTGTGGTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS CAA 72 bp | GCCACAGGCAGAGCTCTGCTCAAGCACATTACCTGGTaGTCGAGCAGAGGCTGCAGCATGGCACTTGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ATGRALLKHITW*SSRGCSMALAE Trigger: CTCAGCAAGTGCCATGCTGCAGCCTCTGCTCGACAACCAGGTAATGTGCTTGAGCAGAGCTCTGCCTGTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231341.2 |
||
| CDS CAA 72 bp | AGCGTCAGGGGGACGTGCTCTACATTCTGCATATTTTaGAAGCCAACCTGGTTGTCGAGCAGAGGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SVRGTCSTFCIF*KPTWLSSRGCS Trigger: GCTGCAGCCTCTGCTCGACAACCAGGTTGGCTTCAAAAATATGCAGAATGTAGAGCACGTCCCCCTGACGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000232500.2 |
||
| CDS TCA 72 bp | AATCTTCTCCAGCAATTGCCAATACAGTACCTCCGTTaGAGGCATAAGGCGAAAACCGCAGCTGCACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NLLQQLPIQYLR*RHKAKTAAAQG Trigger: GCCCTGTGCAGCTGCGGTTTTCGCCTTATGCCTTCAACGGAGGTACTGTATTGGCAATTGCTGGAGAAGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS CAA 72 bp | GACAGCATTGCAGCAATCGCCCCCGTTGTCATGGCCTaGTTATTGGAATGCTTGTACATCTTTAATCTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: DSIAAIAPVVMA*LLECLYIFNLA Trigger: AGCAAGATTAAAGATGTACAAGCATTCCAATAACAAGGCCATGACAACGGGGGCGATTGCTGCAATGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS CAA 90 bp | TCTTGTCTGTCAGTTTGTAGCATTTGGGGCTATCTCGGGTATGAATaGAAAATCCTTCACTCAATCGAGTGTCTGAAGCGACGATGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SCLSVCSIWGYLGYE*KILHSIECLKRRWK Trigger: TTTCCATCGTCGCTTCAGACACTCGATTGAGTGAAGGATTTTCAATTCATACCCGAGATAGCCCCAAATGCTACAAACTGACAGACAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS CAA 72 bp | TCAGTTTGTAGCATTTGGGGCTATCTCGGGTATGAATaGAAAATCCTTCACTCAATCGAGTGTCTGAAGCGA | + |
|
Preference number: 6 (lower is better) Translates to: SVCSIWGYLGYE*KILHSIECLKR Trigger: TCGCTTCAGACACTCGATTGAGTGAAGGATTTTCAATTCATACCCGAGATAGCCCCAAATGCTACAAACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS CCA 72 bp | AGCCAATTACTGTCTTGTCTGTCAGTTTGTAGCATTTaGGGCTATCTCGGGTATGAATTGAAAATCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQLLSCLSVCSI*GYLGYELKILH Trigger: GTGAAGGATTTTCAATTCATACCCGAGATAGCCCCAAATGCTACAAACTGACAGACAAGACAGTAATTGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||
| CDS CCA 72 bp | GCTTCAATAATCTTTGTCAAAGTGAGACAATCTCCATaGAAACCACTGCAGCCAATTACTGTCTTGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASIIFVKVRQSP*KPLQPITVLSV Trigger: GACAGACAAGACAGTAATTGGCTGCAGTGGTTTCCATGGAGATTGTCTCACTTTGACAAAGATTATTGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014913.11 ENSMUST00000231341.2 |
||