Pregenerated sensors for PSMA8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036743Ensembl transcript IDs: ENSMUST00000040860.3, ENSMUST00000234177.2, ENSMUST00000234680.2, ENSMUST00000234869.2, ENSMUST00000234922.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAGCACAACTATATTAGTTCCTCGAATTCCAACCTTGGGTCAGTaGATTCCCACGGAAGTGGCCATAAGCACTGACGTAGACTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: PSTTILVPRIPTLGQ*IPTEVAISTDVDCS Trigger: AGAACAGTCTACGTCAGTGCTTATGGCCACTTCCGTGGGAATCCACTGACCCAAGGTTGGAATTCGAGGAACTAATATAGTTGTGCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| 3UTR GCA 90 bp | AAGCGTGGTAAGTCCCGGAGGGATCTGTCTGATACAATCTTGGGATaGCATCATCATCAAAGCCTACAATTAAGGCTGAAATACCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: KRGKSRRDLSDTILG*HHHQSLQLRLKYQK Trigger: CTTTTGGTATTTCAGCCTTAATTGTAGGCTTTGATGATGATGGCATCCCAAGATTGTATCAGACAGATCCCTCCGGGACTTACCACGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR TCA 90 bp | TGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCAAATTGTTaGCACCTCACCAACACATTGATGTCCTTACCATTCACCAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: CFSLWSQHIQILSNC*HLTNTLMSLPFTKK Trigger: TTTCTTGGTGAATGGTAAGGACATCAATGTGTTGGTGAGGTGTCAACAATTTGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTGCTTTAGCGTCGCTATGAAGCGAGTTATATACTCTACAGTGACGGGATCCGTGAGCTTGTGGCTCTaGCACTCCACCCGCGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: FCFSVAMKRVIYSTVTGSVSLWL*HSTRAL Trigger: CAGAGCGCGGGTGGAGTGCCAGAGCCACAAGCTCAC...GGATCCCGTCACTGTAGAGTATATAACTCGCTTCATAGCGACGCTAAAGCAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAGGAGTTCAAGGTCATCCTCTGGCTACAGAGGGTTTTCAAGGCCAGTGCGGAGGAAGAAAACAGGCTaGACTCTACCTCCACTGCCA | + |
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Preference number: 2 (lower is better) Translates to: IRSSRSSSGYRGFSRPVRRKKTG*TLPPLP Trigger: TGGCAGTGGAGGTAGAGTTCAGCCTGTTTTCTTCCT...CCGCACTGGCCTTGAAAACCCTCTGTAGCCAGAGGATGACCTTGAACTCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| 3UTR CAA 90 bp | AACCTCAGGAGGGAACTCTCAGCGCCCAGTGACGCTGGCATTAGGTaGACTTCTTTGACTTTGTCTTCTCTGCTTCGTCCTTTTCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: NLRRELSAPSDAGIR*TSLTLSSLLRPFPF Trigger: AAAGGGAAAAGGACGAAGCAGAGAAGACAAAGTCAAAGAAGTCAACCTAATGCCAGCGTCACTGGGCGCTGAGAGTTCCCTCCTGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR GCA 90 bp | TTGCTTTCCAAGCGTGGTAAGTCCCGGAGGGATCTGTCTGATACAATCTTGGGAGACCTGCAAAAGCCATaGAGACATGGTCATCGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LLSKRGKSRRDLSDTILGDLQKP*RHGHRE Trigger: CTCTCGATGACCATGTCTGCATGGCTTTTGCAGGTC...TCCCAAGATTGTATCAGACAGATCCCTCCGGGACTTACCACGCTTGGAAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR CAA 90 bp | AGGGAACTCTCAGCGCCCAGTGACGCTGGCATTAGGTTGACTTCTTaGACTTTGTCTTCTCTGCTTCGTCCTTTTCCCTTTCTATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: RELSAPSDAGIRLTS*TLSSLLRPFPFLFH Trigger: GTGAAATAGAAAGGGAAAAGGACGAAGCAGAGAAGACAAAGTCAAAGAAGTCAACCTAATGCCAGCGTCACTGGGCGCTGAGAGTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR CAA 90 bp | TTTTCTACCCCAAGCACAACTATATTAGTTCCTCGAATTCCAACCTaGGGTCAGTGGATTCCCACGGAAGTGGCCATAAGCACTGACGTA | + |
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Preference number: 2 (lower is better) Translates to: FSTPSTTILVPRIPT*GQWIPTEVAISTDV Trigger: TACGTCAGTGCTTATGGCCACTTCCGTGGGAATCCACTGACCCAAGGTTGGAATTCGAGGAACTAATATAGTTGTGCTTGGGGTAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | TGGCTACAGAGGGTTTTCAAGGCCAGTGCGGGCTACATGAGATCCTATGTTAAAACCTCACCAACACATTaGTGTCCTTACCATTCACCA | + |
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Preference number: 2 (lower is better) Translates to: WLQRVFKASAGYMRSYVKTSPTH*CPYHSP Trigger: TGGTGAATGGTAAGGACATCAATGTGTTGGTGAGGT...TTTAACATAGGATCTCATGTAGCCCGCACTGGCCTTGAAAACCCTCTGTAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR CAA 90 bp | CTTTCCAAGCGTGGTAAGTCCCGGAGGGATCTGTCTGATACAATCTaGGGATGCCATCATCATCAAAGCCTACAATTAAGGCTGAAATAC | + |
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Preference number: 2 (lower is better) Translates to: LSKRGKSRRDLSDTI*GCHHHQSLQLRLKY Trigger: GTATTTCAGCCTTAATTGTAGGCTTTGATGATGATGGCATCCCAAGATTGTATCAGACAGATCCCTCCGGGACTTACCACGCTTGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTACAGAGGGTTTTCAAGGCCAGTGCGGGCTACATGAGATCCTATGTTAAACTCTGGGTATATTTCTaGTTTAGCGTCGCTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: WLQRVFKASAGYMRSYVKLWVYF*FSVAMK Trigger: CTTCATAGCGACGCTAAAGCAGAAATATACCCAGAG...TTTAACATAGGATCTCATGTAGCCCGCACTGGCCTTGAAAACCCTCTGTAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| 3UTR CAA 90 bp | TCAAAGCCTACAATTAAGGCTGAAATACCAAAAGGCCTTCGTCCATaGCTCTGGGTATATTTCTGCTTTAGCGTCGCTATGAAGCGAGTT | + |
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Preference number: 2 (lower is better) Translates to: SKPTIKAEIPKGLRP*LWVYFCFSVAMKRV Trigger: AACTCGCTTCATAGCGACGCTAAAGCAGAAATATACCCAGAGCAATGGACGAAGGCCTTTTGGTATTTCAGCCTTAATTGTAGGCTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTTTCTATTTCACTCACCTCCAGTTCAATTTCTTTGGCACTAAACATCTTCCGGAGGGATCTGTCTaGTACAATCTTGGGATGCCA | + |
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Preference number: 2 (lower is better) Translates to: FPFYFTHLQFNFFGTKHLPEGSV*YNLGMP Trigger: TGGCATCCCAAGATTGTATCAGACAGATCCCTCCGG...AAGATGTTTAGTGCCAAAGAAATTGAACTGGAGGTGAGTGAAATAGAAAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR GCA 90 bp | TATAGCCAGTTCAATGTTCTTTCCGCCAGACTGGACAACTTCGAGCAAAGCTTTCTCTGGGTATATTTCTaGTTTAGCGTCGCTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: YSQFNVLSARLDNFEQSFLWVYF*FSVAMK Trigger: CTTCATAGCGACGCTAAAGCAGAAATATACCCAGAG...AAAGCTTTGCTCGAAGTTGTCCAGTCTGGCGGAAAGAACATTGAACTGGCTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCTAAAACCTCAGGAGGGAACTTGGTTCCAACCCATTaGTTTCTTCTAAAACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: SSMVGSNPLISSKTSGGNLVPTH*FLLKPQ Trigger: CTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAA...GTTCCCTCCTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAACCATTGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CCA 90 bp | CATAGGCAAGCTGCAAGAACAAAGATGAGTATGATCTGGAACCCAGCCTTAAAGGAAAAGCTCAATGGTTaGTTCCAACCCATTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: HRQAARTKMSMIWNPALKEKLNG*FQPIDF Trigger: GAAATCAATGGGTTGGAACCAACCATTGAGCTTTTC...CTTTAAGGCTGGGTTCCAGATCATACTCATCTTTGTTCTTGCAGCTTGCCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTTCTATTTCACTCACCTCCAGTTCAATTTCTTTGGCACTAAACATCTTCACCTCACCAACACATTaGTGTCCTTACCATTCACCA | + |
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Preference number: 2 (lower is better) Translates to: SLSISLTSSSISLALNIFTSPTH*CPYHSP Trigger: TGGTGAATGGTAAGGACATCAATGTGTTGGTGAGGT...GAAGATGTTTAGTGCCAAAGAAATTGAACTGGAGGTGAGTGAAATAGAAAGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTTTCTATTTCACTCACCTCCAGTTCAATTTCTTTGGCACTAAACATCTTACAGTCCTTTCATCTTaGAGCTTGGCCACTGACTTT | + |
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Preference number: 2 (lower is better) Translates to: FPFYFTHLQFNFFGTKHLTVLSS*SLATDF Trigger: AAAGTCAGTGGCCAAGCTTCAAGATGAAAGGACTGT...AAGATGTTTAGTGCCAAAGAAATTGAACTGGAGGTGAGTGAAATAGAAAGGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | ATCACAATGCCTAACTTACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATAAGAGTTACGTGGAACTaGGGAATTTTACAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: ITMPNLQSFCFSLWSQHIRVTWN*GILQKI Trigger: GATTTTCTGTAAAATTCCTCAGTTCCACGTAACTCT...TATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTAAGTTAGGCATTGTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTCTATTTCACTCACCTCCAGTTCAATTTCTTTGGCACTAAACATCTTCAAAAAGGCCTTCGTCCATTaGTCTGGGTATATTTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: LSISLTSSSISLALNIFKKAFVH*SGYISA Trigger: AGCAGAAATATACCCAGAGCAATGGACGAAGGCCTT...TTTGAAGATGTTTAGTGCCAAAGAAATTGAACTGGAGGTGAGTGAAATAGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCCGCCAGACTGGACAACTTCGAGCAAAGCTTTTATTGCTAATTTGATAGAAAAGCTCAATGGTTaGTTCCAACCCATTGATTTC | + |
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Preference number: 2 (lower is better) Translates to: FFPPDWTTSSKAFIANLIEKLNG*FQPIDF Trigger: GAAATCAATGGGTTGGAACCAACCATTGAGCTTTTC...TATCAAATTAGCAATAAAAGCTTTGCTCGAAGTTGTCCAGTCTGGCGGAAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCGCCAGACTGGACAACTTCGAGCAAAGCTTTTATTGCTAATTTGATAGCTTGTCTGATACAATCTTaGGATGCCATCATCATCAAA | + |
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Preference number: 2 (lower is better) Translates to: FPPDWTTSSKAFIANLIACLIQS*DAIIIK Trigger: TTTGATGATGATGGCATCCCAAGATTGTATCAGACA...AGCTATCAAATTAGCAATAAAAGCTTTGCTCGAAGTTGTCCAGTCTGGCGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTTCTATTTCACTCACCTCCAGTTCAATTTCTTTGGCACTAAACATCTTCAGAGTTACGTGGAACTaGGGAATTTTACAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: SLSISLTSSSISLALNIFRVTWN*GILQKI Trigger: GATTTTCTGTAAAATTCCTCAGTTCCACGTAACTCT...GAAGATGTTTAGTGCCAAAGAAATTGAACTGGAGGTGAGTGAAATAGAAAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCAAATTGTTGACAGAGTTACGTGGAACTaGGGAATTTTACAGAAAATC | + |
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Preference number: 2 (lower is better) Translates to: PSALAYGVSTYRFYQIVDRVTWN*GILQKI Trigger: GATTTTCTGTAAAATTCCTCAGTTCCACGTAACTCT...GTCAACAATTTGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR-3UTR TCA 90 bp | AAATCATCTTCTTTCCCCCTAGAATTTGCTTGTATGAAGAAAAGCAACAGTACTTTGGTTCCAACCCATTaGTTTCTTCTAAAACCTCAG | + |
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Preference number: 2 (lower is better) Translates to: KSSSFPLEFACMKKSNSTLVPTH*FLLKPQ Trigger: CTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAA...AGTACTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGGAAAGAAGATGATTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR CCA 72 bp | ACAGTGACGGGATCCTCCACTGTGAGCTTGTGGCTCTaGCACTCCACCCGCGCTCTGCTGATCACCACTCTA | + |
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Preference number: 3 (lower is better) Translates to: TVTGSSTVSLWL*HSTRALLITTL Trigger: TAGAGTGGTGATCAGCAGAGCGCGGGTGGAGTGCCAGAGCCACAAGCTCACAGTGGAGGATCCCGTCACTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR GCA 72 bp | CAGAAATTCCCGGACAGTTTTAGCACTTCGGCCTATTaGATTTGCTTTCCAAGCGTGGTAAGTCCCGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: QKFPDSFSTSAY*ICFPSVVSPGG Trigger: CCCTCCGGGACTTACCACGCTTGGAAAGCAAATGCAATAGGCCGAAGTGCTAAAACTGTCCGGGAATTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR CCA 72 bp | ACTATATTAGTTCCTCGAATTCCAACCTTGGGTCAGTaGATTCCCACGGAAGTGGCCATAAGCACTGACGTA | + |
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Preference number: 3 (lower is better) Translates to: TILVPRIPTLGQ*IPTEVAISTDV Trigger: TACGTCAGTGCTTATGGCCACTTCCGTGGGAATCCACTGACCCAAGGTTGGAATTCGAGGAACTAATATAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| 3UTR CCA 72 bp | AAGGCTGAAATACCAAAAGGCCTTCGTCCATTGCTCTaGGTATATTTCTGCTTTAGCGTCGCTATGAAGCGA | + |
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Preference number: 3 (lower is better) Translates to: KAEIPKGLRPLL*VYFCFSVAMKR Trigger: TCGCTTCATAGCGACGCTAAAGCAGAAATATACCCAGAGCAATGGACGAAGGCCTTTTGGTATTTCAGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | GAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGAGCTTGTGGCTAAACAACGGACATTCTaGAAGATGAACGTAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: EASYILYSDGILHCELVAKQRTF*KMNVEK Trigger: CTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTT...AGCCACAAGCTCACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCTAAAACCTCAGGAGGGAACCCCCCTAGAATTTGCTaGTATGAAGAAAAGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: SSMVGSNPLISSKTSGGNPPRIC*YEEKQQ Trigger: CTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGG...GTTCCCTCCTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAACCATTGAGCT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | CATAGGCAAGCTGCAAGAACAAAGATGAGTATGATCTGGAACCCAGCCTTAAAGAAACAACGGACATTCTaGAAGATGAACGTAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: HRQAARTKMSMIWNPALKKQRTF*KMNVEK Trigger: CTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTT...CTTTAAGGCTGGGTTCCAGATCATACTCATCTTTGTTCTTGCAGCTTGCCTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | AACTTACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCACACCTCACCAACACATaGATGTCCTTACCATTCACC | + |
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Preference number: 3 (lower is better) Translates to: NLQSFCFSLWSQHIQILSHLTNT*MSLPFT Trigger: GGTGAATGGTAAGGACATCAATGTGTTGGTGAGGTG...TGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTACTCTGAGATGACTAGCTCCTTAACTAACAGAGAAGAGACAAACTTCAAACCCCCTAGAATTTGCTaGTATGAAGAAAAGCAACAG | + |
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Preference number: 3 (lower is better) Translates to: VYSEMTSSLTNREETNFKPPRIC*YEEKQQ Trigger: CTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGG...TTTGAAGTTTGTCTCTTCTCTGTTAGTTAAGGAGCTAGTCATCTCAGAGTAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | AAATCATCTTCTTTCCCCCTAGAATTTGCTTGTATGAAGAAAAGCAACAGTACTCTGTCTGATACAATCTaGGGATGCCATCATCATCAA | + |
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Preference number: 3 (lower is better) Translates to: KSSSFPLEFACMKKSNSTLSDTI*GCHHHQ Trigger: TTGATGATGATGGCATCCCAAGATTGTATCAGACAG...AGTACTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGGAAAGAAGATGATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| 3UTR-3UTR CAA 90 bp | TACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCAAATTAAACAACGGACATTCTaGAAGATGAACGTAGAAAAG | + |
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Preference number: 3 (lower is better) Translates to: YNPSALAYGVSTYRFYQIKQRTF*KMNVEK Trigger: CTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTT...AATTTGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| 3UTR TCA 72 bp | CAAGCTCTACAGTATACGATTAGAGTTACGTGGAACTaGGGAATTTTACAGAAAATCTTCCCATTAACTTAT | + |
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Preference number: 3 (lower is better) Translates to: QALQYTIRVTWN*GILQKIFPLTY Trigger: ATAAGTTAATGGGAAGATTTTCTGTAAAATTCCTCAGTTCCACGTAACTCTAATCGTATACTGTAGAGCTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR TCA 90 bp | GCTCTGCTGATCACCACTCTAGCATCCGCTGTCAGACCTGCAAAAGCCATGCAGCTGGGGAGAAGACGGTaGTTGCCCTGTCATACCGAG | + |
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Preference number: 4 (lower is better) Translates to: ALLITTLASAVRPAKAMQLGRRR*LPCHTE Trigger: CTCGGTATGACAGGGCAATCACCGTCTTCTCCCCAG...CTGCATGGCTTTTGCAGGTCTGACAGCGGATGCTAGAGTGGTGATCAGCAGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR TCA 90 bp | TCCAAGCGTGGTAAGTCCCGGAGGGATCTGTCTGATACAATCTTGGGATGCCATCTGGGGAGAAGACGGTaGTTGCCCTGTCATACCGAG | + |
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Preference number: 4 (lower is better) Translates to: SKRGKSRRDLSDTILGCHLGRRR*LPCHTE Trigger: CTCGGTATGACAGGGCAATCACCGTCTTCTCCCCAG...ATGGCATCCCAAGATTGTATCAGACAGATCCCTCCGGGACTTACCACGCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGCTGATCACCACTCTAGCATCCGCTGTCAGACCTGCAAAAGCCATGCAGGAAAAGGTGTCCATCTaGGGAGAAGACGGTGATTGC | + |
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Preference number: 4 (lower is better) Translates to: ALLITTLASAVRPAKAMQEKVSI*GEDGDC Trigger: GCAATCACCGTCTTCTCCCCAGATGGACACCTTTTC...CTGCATGGCTTTTGCAGGTCTGACAGCGGATGCTAGAGTGGTGATCAGCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CCA 90 bp | CCAAGCACAACTATATTAGTTCCTCGAATTCCAACCTTGGGTCAGTGGATTCCCCCAAGGCCCTTGCTCTaGGAGCCAGGGCTGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: PSTTILVPRIPTLGQWIPPRPLL*EPGLEQ Trigger: CTGTTCCAGCCCTGGCTCCCAGAGCAAGGGCCTTGG...GGGAATCCACTGACCCAAGGTTGGAATTCGAGGAACTAATATAGTTGTGCTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| CDS-3UTR TCA 90 bp | GCAGACATGGTCATCGAGAGCGCAGATTTTCCTCACAGTCCTTTCATCTTGAAGCTGGGGAGAAGACGGTaGTTGCCCTGTCATACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ADMVIESADFPHSPFILKLGRRR*LPCHTE Trigger: CTCGGTATGACAGGGCAATCACCGTCTTCTCCCCAG...CTTCAAGATGAAAGGACTGTGAGGAAAATCTGCGCTCTCGATGACCATGTCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR GCA 90 bp | AGCGTCGCTATGAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGGGAGCCTTTCTTCACTaGTTCCTGGGCATACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVAMKRVIYSTVTGSSTVGAFLH*FLGILH Trigger: GTGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCC...CACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTCATAGCGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | TTTCCAAGCGTGGTAAGTCCCGGAGGGATCTGTCTGATACAATCTTGGGATGCCTGGGCATACTCCACTTaGAAAAGGTGTCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPSVVSPGGICLIQSWDAWAYST*KRCPSG Trigger: CCCAGATGGACACCTTTTCCAAGTGGAGTATGCCCA...GGCATCCCAAGATTGTATCAGACAGATCCCTCCGGGACTTACCACGCTTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTCGCTATGAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGAGCAGCTTACCGCGGTaGAGCCTTTCTTCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SVAMKRVIYSTVTGSSTVSSLPR*SLSSLL Trigger: AAGCAGTGAAGAAAGGCTCCACCGCGGTAAGCTGCT...CACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTCATAGCGACGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCCGCCAGACTGGACAACTTCGAGCAAAGCTTTTATTGCTAATTTGATATCTGGGAGCCAGGGCTaGAACAGCGGCTGCCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFPPDWTTSSKAFIANLISGSQG*NSGCRL Trigger: CAGCCGGCAGCCGCTGTTCCAGCCCTGGCTCCCAGA...TATCAAATTAGCAATAAAAGCTTTGCTCGAAGTTGTCCAGTCTGGCGGAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
||
| 3UTR CAA 72 bp | AGGGAACTCTCAGCGCCCAGTGACGCTGGCATTAGGTaGACTTCTTTGACTTTGTCTTCTCTGCTTCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RELSAPSDAGIR*TSLTLSSLLRP Trigger: AGGACGAAGCAGAGAAGACAAAGTCAAAGAAGTCAACCTAATGCCAGCGTCACTGGGCGCTGAGAGTTCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGAGCTTGTGGCTGAAAAGGTGTCCATCTaGGGAGAAGACGGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EASYILYSDGILHCELVAEKVSI*GEDGDC Trigger: GCAATCACCGTCTTCTCCCCAGATGGACACCTTTTC...AGCCACAAGCTCACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCAAGGTCATCCTCTGGCTACAGAGGGTTTTCAAGGCCAGTGCGGGCTACATTCTTCACTGCTTCCTaGGCATACTCCACTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSRSSSGYRGFSRPVRATFFTAS*AYSTWK Trigger: TTTCCAAGTGGAGTATGCCCAGGAAGCAGTGAAGAA...TGTAGCCCGCACTGGCCTTGAAAACCCTCTGTAGCCAGAGGATGACCTTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGCGTCGCTATGAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGGAGCCTTTCTTCACTaGTTCCTGGGCATACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSVAMKRVIYSTVTGSSTGAFLH*FLGILH Trigger: GTGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCC...AGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTCATAGCGACGCTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR GCA 90 bp | CACAACTATATTAGTTCCTCGAATTCCAACCTTGGGTCAGTGGATTCCCACGGAGGAGCCTTTCTTCACTaGTTCCTGGGCATACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HNYISSSNSNLGSVDSHGGAFLH*FLGILH Trigger: GTGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCC...TCCGTGGGAATCCACTGACCCAAGGTTGGAATTCGAGGAACTAATATAGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
||
| CDS-3UTR GCA 90 bp | TTTTTAGCATCTATCACAATGCCTAACTTACAATCCTTCTGCTTTAGCCTATGGCCACTCCAAGGCCCTTaGTCTGGGAGCCAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLASITMPNLQSFCFSLWPLQGP*SGSQGW Trigger: CCAGCCCTGGCTCCCAGAGCAAGGGCCTTGGAGTGG...CCATAGGCTAAAGCAGAAGGATTGTAAGTTAGGCATTGTGATAGATGCTAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
||
| 3UTR CAA 72 bp | CCAAGCACAACTATATTAGTTCCTCGAATTCCAACCTaGGGTCAGTGGATTCCCACGGAAGTGGCCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTTILVPRIPT*GQWIPTEVAIS Trigger: GCTTATGGCCACTTCCGTGGGAATCCACTGACCCAAGGTTGGAATTCGAGGAACTAATATAGTTGTGCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
||
| 3UTR CAA 72 bp | TCAGCGCCCAGTGACGCTGGCATTAGGTTGACTTCTTaGACTTTGTCTTCTCTGCTTCGTCCTTTTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPSDAGIRLTS*TLSSLLRPFPF Trigger: AAAGGGAAAAGGACGAAGCAGAGAAGACAAAGTCAAAGAAGTCAACCTAATGCCAGCGTCACTGGGCGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | GTTTACTCTGAGATGACTAGCTCCTTAACTAACAGAGAAGAGACAAACTTCAAAGTGAGCTTGTGGCTCTaGCACTCCACCCGCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEMTSSLTNREETNFKVSLWL*HSTRAL Trigger: CAGAGCGCGGGTGGAGTGCCAGAGCCACAAGCTCAC...TTTGAAGTTTGTCTCTTCTCTGTTAGTTAAGGAGCTAGTCATCTCAGAGTAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR CCA 90 bp | CATCAAAGCCTACAATTAAGGCTGAAATACCAAAAGGCCTTCGTCCATTGCTCTGAAAACTGCCACGCCTaGTTCTTGTGGTTCGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: HQSLQLRLKYQKAFVHCSENCHA*FLWFAV Trigger: CACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTC...AGAGCAATGGACGAAGGCCTTTTGGTATTTCAGCCTTAATTGTAGGCTTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
||
| CDS-3UTR TCA 90 bp | TCAATGGTTGGTTCCAACCCATTGATTTCTTCTAAAACCTCAGGAGGGAACTCTCCGGAGGGATCTGTCTaGTACAATCTTGGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SMVGSNPLISSKTSGGNSPEGSV*YNLGMP Trigger: TGGCATCCCAAGATTGTATCAGACAGATCCCTCCGG...AGAGTTCCCTCCTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAACCATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCTAAAACCTCAGGAGGGAACTGGGCATACTCCACTTaGAAAAGGTGTCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSMVGSNPLISSKTSGGNWAYST*KRCPSG Trigger: CCCAGATGGACACCTTTTCCAAGTGGAGTATGCCCA...GTTCCCTCCTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAACCATTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | CGCTATGAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGAGCTTTTCTTCACTGCTTCCTaGGCATACTCCACTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RYEASYILYSDGILHCELFFTAS*AYSTWK Trigger: TTTCCAAGTGGAGTATGCCCAGGAAGCAGTGAAGAA...AAGCTCACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTCATAGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | AAATCATCTTCTTTCCCCCTAGAATTTGCTTGTATGAAGAAAAGCAACAGTACTGTGAGCTTGTGGCTCTaGCACTCCACCCGCGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSSSFPLEFACMKKSNSTVSLWL*HSTRAL Trigger: CAGAGCGCGGGTGGAGTGCCAGAGCCACAAGCTCAC...AGTACTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGGAAAGAAGATGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR TCA 90 bp | GTTTACTCTGAGATGACTAGCTCCTTAACTAACAGAGAAGAGACAAACTTCAAACTGGGGAGAAGACGGTaGTTGCCCTGTCATACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: VYSEMTSSLTNREETNFKLGRRR*LPCHTE Trigger: CTCGGTATGACAGGGCAATCACCGTCTTCTCCCCAG...TTTGAAGTTTGTCTCTTCTCTGTTAGTTAAGGAGCTAGTCATCTCAGAGTAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR TCA 90 bp | CCTATGGAGTCAGCACATACAGATTTTATCAAATTGTTGACACCTCACCAACACCCGGAGGGATCTGTCTaGTACAATCTTGGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PMESAHTDFIKLLTPHQHPEGSV*YNLGMP Trigger: TGGCATCCCAAGATTGTATCAGACAGATCCCTCCGG...GTGTTGGTGAGGTGTCAACAATTTGATAAAATCTGTATGTGCTGACTCCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
||
| CDS-3UTR GCA 90 bp | CGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGACCTGCAAAAGCCATaGAGACATGGTCATCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTFLKMNVEKLNGWFQPIDLQKP*RHGHRE Trigger: CTCTCGATGACCATGTCTGCATGGCTTTTGCAGGTC...AATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR GCA 90 bp | ACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATATCCGCTGTCAGACCTaGAAAAGCCATGCAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: TDILEDERRKAQWLVPTHIRCQT*KSHADM Trigger: CATGTCTGCATGGCTTTTGCAGGTCTGACAGCGGAT...ATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| CDS-3UTR CCA 90 bp | TGCCATCATCATCAAAGCCTACAATTAAGGCTGAAATACCAAAAGGCCTTCGTCTGGGCATACTCCACTTaGAAAAGGTGTCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CHHHQSLQLRLKYQKAFVWAYST*KRCPSG Trigger: CCCAGATGGACACCTTTTCCAAGTGGAGTATGCCCA...GACGAAGGCCTTTTGGTATTTCAGCCTTAATTGTAGGCTTTGATGATGATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CCA 90 bp | CGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTTGGGCATACTCCACTTaGAAAAGGTGTCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTFLKMNVEKLNGWFQPIWAYST*KRCPSG Trigger: CCCAGATGGACACCTTTTCCAAGTGGAGTATGCCCA...AATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CCA 90 bp | TATGAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGAGCTTGTGTTCTTCACTGCTTCCTaGGCATACTCCACTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YEASYILYSDGILHCELVFFTAS*AYSTWK Trigger: TTTCCAAGTGGAGTATGCCCAGGAAGCAGTGAAGAA...CACAAGCTCACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR TCA 90 bp | TACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCAAATTCTGGGGAGAAGACGGTaGTTGCCCTGTCATACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: YNPSALAYGVSTYRFYQILGRRR*LPCHTE Trigger: CTCGGTATGACAGGGCAATCACCGTCTTCTCCCCAG...AATTTGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCTAAAACCTCAGGAGGGAACACAGTCCTTTCATCTTaGAGCTTGGCCACTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSMVGSNPLISSKTSGGNTVLSS*SLATDF Trigger: AAAGTCAGTGGCCAAGCTTCAAGATGAAAGGACTGT...GTTCCCTCCTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAACCATTGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCGGAGCCTTTCTTCACTaGTTCCTGGGCATACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKMNVEKLNGWFQPIDFFGAFLH*FLGILH Trigger: GTGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCC...GAAGAAATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| 3UTR CAA 72 bp | CCCAGTGACGCTGGCATTAGGTTGACTTCTTTGACTTaGTCTTCTCTGCTTCGTCCTTTTCCCTTTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PSDAGIRLTSLT*SSLLRPFPFLF Trigger: AAATAGAAAGGGAAAAGGACGAAGCAGAGAAGACAAAGTCAAAGAAGTCAACCTAATGCCAGCGTCACTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR GCA 90 bp | TTGAAAACAACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTGGAGCCTTTCTTCACTaGTTCCTGGGCATACTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKTTDILEDERRKAQWLVGAFLH*FLGILH Trigger: GTGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCC...AACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR GCA 90 bp | ACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATGACCTGCAAAAGCCATaGAGACATGGTCATCGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TFLKMNVEKLNGWFQPIDDLQKP*RHGHRE Trigger: CTCTCGATGACCATGTCTGCATGGCTTTTGCAGGTC...ATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR GCA 90 bp | CGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTAAGGCCTTCGTCCATTaGTCTGGGTATATTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTFLKMNVEKLNGWFQPIKAFVH*SGYISA Trigger: AGCAGAAATATACCCAGAGCAATGGACGAAGGCCTT...AATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR GCA 90 bp | CCTATGGAGTCAGCACATACAGATTTTATCAAATTGTTGACACCTCACCAACACAGCACTTCGGCCTATTaGATTTGCTTTCCAAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PMESAHTDFIKLLTPHQHSTSAY*ICFPSV Trigger: CACGCTTGGAAAGCAAATGCAATAGGCCGAAGTGCT...GTGTTGGTGAGGTGTCAACAATTTGATAAAATCTGTATGTGCTGACTCCATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATGAAAAGGTGTCCATCTaGGGAGAAGACGGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLKMNVEKLNGWFQPIDEKVSI*GEDGDC Trigger: GCAATCACCGTCTTCTCCCCAGATGGACACCTTTTC...ATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCGAAAAGGTGTCCATCTaGGGAGAAGACGGTGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKMNVEKLNGWFQPIDFFEKVSI*GEDGDC Trigger: GCAATCACCGTCTTCTCCCCAGATGGACACCTTTTC...GAAGAAATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATTGGGCATACTCCACTTaGAAAAGGTGTCCATCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLKMNVEKLNGWFQPIDWAYST*KRCPSG Trigger: CCCAGATGGACACCTTTTCCAAGTGGAGTATGCCCA...ATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | CGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTTTCTTCACTGCTTCCTaGGCATACTCCACTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RTFLKMNVEKLNGWFQPIFFTAS*AYSTWK Trigger: TTTCCAAGTGGAGTATGCCCAGGAAGCAGTGAAGAA...AATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
||
| CDS-3UTR CCA 90 bp | TTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCGAATTCCAACCGCGGTaGAGCCTTTCTTCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKMNVEKLNGWFQPIDFFEFQPR*SLSSLL Trigger: AAGCAGTGAAGAAAGGCTCCACCGCGGTTGGAATTC...GAAGAAATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR TCA 90 bp | CCTATGGAGTCAGCACATACAGATTTTATCAAATTGTTGACACCTCACCAACACACAGTCCTTTCATCTTaGAGCTTGGCCACTGACTTT | + |
|
Preference number: 4 (lower is better) Translates to: PMESAHTDFIKLLTPHQHTVLSS*SLATDF Trigger: AAAGTCAGTGGCCAAGCTTCAAGATGAAAGGACTGT...GTGTTGGTGAGGTGTCAACAATTTGATAAAATCTGTATGTGCTGACTCCATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
||
| CDS-3UTR CCA 90 bp | TTGAAAACAACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTGAATTCCAACCGCGGTaGAGCCTTTCTTCACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LKTTDILEDERRKAQWLVEFQPR*SLSSLL Trigger: AAGCAGTGAAGAAAGGCTCCACCGCGGTTGGAATTC...AACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
||
| CDS-3UTR CCA 90 bp | TCATCAAAGCCTACAATTAAGGCTGAAATACCAAAAGGCCTTCGTCCATTGCTCCATCCTTCCAACAGCTaGAACTACAAGAGAAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: SSKPTIKAEIPKGLRPLLHPSNS*NYKRKL Trigger: CAGTTTTCTCTTGTAGTTCCAGCTGTTGGAAGGATG...GAGCAATGGACGAAGGCCTTTTGGTATTTCAGCCTTAATTGTAGGCTTTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
||
| CDS-3UTR TCA 90 bp | AGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCTAAAACCTCAGGAGGGAACAGCTTCCTTGTCATTTaGAATTGCATCTTCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSMVGSNPLISSKTSGGNSFLVI*NCIFCV Trigger: TACACAGAAGATGCAATTTCAAATGACAAGGAAGCT...GTTCCCTCCTGAGGTTTTAGAAGAAATCAATGGGTTGGAACCAACCATTGAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
||
| CDS-3UTR GCA 90 bp | AAATCATCTTCTTTCCCCCTAGAATTTGCTTGTATGAAGAAAAGCAACAGTACTATCCGCTGTCAGACCTaGAAAAGCCATGCAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: KSSSFPLEFACMKKSNSTIRCQT*KSHADM Trigger: CATGTCTGCATGGCTTTTGCAGGTCTGACAGCGGAT...AGTACTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGGAAAGAAGATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| CDS-3UTR CCA 90 bp | AAATCATCTTCTTTCCCCCTAGAATTTGCTTGTATGAAGAAAAGCAACAGTACTGAAAAGGTGTCCATCTaGGGAGAAGACGGTGATTGC | + |
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Preference number: 4 (lower is better) Translates to: KSSSFPLEFACMKKSNSTEKVSI*GEDGDC Trigger: GCAATCACCGTCTTCTCCCCAGATGGACACCTTTTC...AGTACTGTTGCTTTTCTTCATACAAGCAAATTCTAGGGGGAAAGAAGATGATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CCA 90 bp | TTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCTTCTTCACTGCTTCCTaGGCATACTCCACTTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LKMNVEKLNGWFQPIDFFFFTAS*AYSTWK Trigger: TTTCCAAGTGGAGTATGCCCAGGAAGCAGTGAAGAA...GAAGAAATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR GCA 90 bp | AAACAACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACTCTGGGTATATTTCTaGTTTAGCGTCGCTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: KQRTFLKMNVEKLNGWFQLWVYF*FSVAMK Trigger: CTTCATAGCGACGCTAAAGCAGAAATATACCCAGAG...TTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| CDS-3UTR GCA 90 bp | AACTTACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCATCGGCCTATTGCATTTaGTTTCCAAGCGTGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: NLQSFCFSLWSQHIQILSSAYCI*FPSVVS Trigger: ACTTACCACGCTTGGAAAGCAAATGCAATAGGCCGA...TGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
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| CDS-3UTR CCA 90 bp | CGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTTGTCTGATACAATCTTaGGATGCCATCATCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: RTFLKMNVEKLNGWFQPICLIQS*DAIIIK Trigger: TTTGATGATGATGGCATCCCAAGATTGTATCAGACA...AATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| CDS-3UTR GCA 90 bp | GTTTACTCTGAGATGACTAGCTCCTTAACTAACAGAGAAGAGACAAACTTCAAACTCTGGGTATATTTCTaGTTTAGCGTCGCTATGAAG | + |
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Preference number: 4 (lower is better) Translates to: VYSEMTSSLTNREETNFKLWVYF*FSVAMK Trigger: CTTCATAGCGACGCTAAAGCAGAAATATACCCAGAG...TTTGAAGTTTGTCTCTTCTCTGTTAGTTAAGGAGCTAGTCATCTCAGAGTAAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| 3UTR CAA 72 bp | CCTATGGAGTCAGCACATACAGATTTTATCAAATTGTaGACACCTCACCAACACATTGATGTCCTTACCATT | + |
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Preference number: 4 (lower is better) Translates to: PMESAHTDFIKL*TPHQHIDVLTI Trigger: AATGGTAAGGACATCAATGTGTTGGTGAGGTGTCAACAATTTGATAAAATCTGTATGTGCTGACTCCATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| CDS-3UTR CCA 90 bp | AAACAACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAATGTCTGATACAATCTTaGGATGCCATCATCATCAAA | + |
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Preference number: 4 (lower is better) Translates to: KQRTFLKMNVEKLNGWFQCLIQS*DAIIIK Trigger: TTTGATGATGATGGCATCCCAAGATTGTATCAGACA...TTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| 3UTR CAA 72 bp | GACTGGACAACTTCGAGCAAAGCTTTTATTGCTAATTaGATAGCTTCCTTGTCATTTGAAATTGCATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DWTTSSKAFIAN*IASLSFEIASS Trigger: AGAAGATGCAATTTCAAATGACAAGGAAGCTATCAAATTAGCAATAAAAGCTTTGCTCGAAGTTGTCCAGTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS CCA 90 bp | CCAACAGCTGGAACTACAAGAGAAAACTGCCACGCCTGGTTCTTGTaGTTCGCGGTGGAGCCTTTCTTCACTGCTTCCTGGGCATACTCC | + |
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Preference number: 5 (lower is better) Translates to: PTAGTTRENCHAWFL*FAVEPFFTASWAYS Trigger: GGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTCTTGTAGTTCCAGCTGTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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| CDS CCA 90 bp | TACATCCTTCCAACAGCTGGAACTACAAGAGAAAACTGCCACGCCTaGTTCTTGTGGTTCGCGGTGGAGCCTTTCTTCACTGCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: YILPTAGTTRENCHA*FLWFAVEPFFTASW Trigger: CCAGGAAGCAGTGAAGAAAGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTCTTGTAGTTCCAGCTGTTGGAAGGATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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| CDS-3UTR CAA 90 bp | TGGCTACAGAGGGTTTTCAAGGCCAGTGCGGGCTACATGAGATCCTATGTTAAACTGGGCATACTCCACTaGGAAAAGGTGTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: WLQRVFKASAGYMRSYVKLGILH*EKVSIW Trigger: CCAGATGGACACCTTTTCCAAGTGGAGTATGCCCAG...TTTAACATAGGATCTCATGTAGCCCGCACTGGCCTTGAAAACCCTCTGTAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234922.2 |
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| CDS-3UTR CAA 90 bp | GCTATGAAGCGAGTTATATACTCTACAGTGACGGGATCCTCCACTGTGAGCTTGCTGGGCATACTCCACTaGGAAAAGGTGTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: AMKRVIYSTVTGSSTVSLLGILH*EKVSIW Trigger: CCAGATGGACACCTTTTCCAAGTGGAGTATGCCCAG...CAAGCTCACAGTGGAGGATCCCGTCACTGTAGAGTATATAACTCGCTTCATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CAA 90 bp | TATTTCTGCTTTAGCGTCGCTATGAAGCGAGTTATATACTCTACAGTGACGGGACTGGGCATACTCCACTaGGAAAAGGTGTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: YFCFSVAMKRVIYSTVTGLGILH*EKVSIW Trigger: CCAGATGGACACCTTTTCCAAGTGGAGTATGCCCAG...TCCCGTCACTGTAGAGTATATAACTCGCTTCATAGCGACGCTAAAGCAGAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000234177.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CAA 90 bp | ACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATCTGGGCATACTCCACTaGGAAAAGGTGTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: TDILEDERRKAQWLVPTHLGILH*EKVSIW Trigger: CCAGATGGACACCTTTTCCAAGTGGAGTATGCCCAG...ATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CAA 90 bp | TTCCCTTTCTATTTCACTCACCTCCAGTTCAATTTCTTTGGCACTAAACATCTTCTGGGCATACTCCACTaGGAAAAGGTGTCCATCTGG | + |
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Preference number: 5 (lower is better) Translates to: FPFYFTHLQFNFFGTKHLLGILH*EKVSIW Trigger: CCAGATGGACACCTTTTCCAAGTGGAGTATGCCCAG...AAGATGTTTAGTGCCAAAGAAATTGAACTGGAGGTGAGTGAAATAGAAAGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000234869.2 ENSMUST00000234922.2 |
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| CDS-3UTR CAA 90 bp | TTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATTTCTTCAAAGGCCTTCGTCCATaGCTCTGGGTATATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: LKMNVEKLNGWFQPIDFFKGLRP*LWVYFC Trigger: GCAGAAATATACCCAGAGCAATGGACGAAGGCCTTT...GAAGAAATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| CDS-3UTR CAA 90 bp | AAACAACGGACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAATTCGGCCTATTGCATTaGCTTTCCAAGCGTGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: KQRTFLKMNVEKLNGWFQFGLLH*LSKRGK Trigger: CTTACCACGCTTGGAAAGCAAATGCAATAGGCCGAA...TTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGTCCGTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
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| CDS-3UTR CAA 90 bp | TACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCAAATTAAAGGCCTTCGTCCATaGCTCTGGGTATATTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: YNPSALAYGVSTYRFYQIKGLRP*LWVYFC Trigger: GCAGAAATATACCCAGAGCAATGGACGAAGGCCTTT...AATTTGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
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| CDS-3UTR CAA 90 bp | ACATTCTTGAAGATGAACGTAGAAAAGCTCAATGGTTGGTTCCAACCCATTGATCTGTCTGATACAATCTaGGGATGCCATCATCATCAA | + |
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Preference number: 5 (lower is better) Translates to: TFLKMNVEKLNGWFQPIDLSDTI*GCHHHQ Trigger: TTGATGATGATGGCATCCCAAGATTGTATCAGACAG...ATCAATGGGTTGGAACCAACCATTGAGCTTTTCTACGTTCATCTTCAAGAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040860.3 ENSMUST00000234680.2 |
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| CDS-3UTR CAA 90 bp | AACTTACAATCCTTCTGCTTTAGCCTATGGAGTCAGCACATACAGATTTTATCACTGTCTGATACAATCTaGGGATGCCATCATCATCAA | + |
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Preference number: 5 (lower is better) Translates to: NLQSFCFSLWSQHIQILSLSDTI*GCHHHQ Trigger: TTGATGATGATGGCATCCCAAGATTGTATCAGACAG...TGATAAAATCTGTATGTGCTGACTCCATAGGCTAAAGCAGAAGGATTGTAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040860.3 |
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| CDS GCA 72 bp | GCTCTGGGAGCCAGGGCTGGAACAGCGGCTGCCGGCTaGCCGGGGAGCAGCTTACCGCGGTGGAGCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ALGARAGTAAAG*PGSSLPRWSLS Trigger: AGAAAGGCTCCACCGCGGTAAGCTGCTCCCCGGGCAGCCGGCAGCCGCTGTTCCAGCCCTGGCTCCCAGAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| CDS CCA 72 bp | GCGGCTGCCGGCTGCCCGGGGAGCAGCTTACCGCGGTaGAGCCTTTCTTCACTGCTTCCTGGGCATACTCCA | + |
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Preference number: 6 (lower is better) Translates to: AAAGCPGSSLPR*SLSSLLPGHTP Trigger: TGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCCACCGCGGTAAGCTGCTCCCCGGGCAGCCGGCAGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| CDS CCA 72 bp | GTAAAGGAAATAGTCCCCACTCCAAGGCCCTTGCTCTaGGAGCCAGGGCTGGAACAGCGGCTGCCGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: VKEIVPTPRPLL*EPGLEQRLPAA Trigger: GGCAGCCGGCAGCCGCTGTTCCAGCCCTGGCTCCCAGAGCAAGGGCCTTGGAGTGGGGACTATTTCCTTTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234922.2 |
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| CDS CCA 72 bp | GAGAAAACTGCCACGCCTGGTTCTTGTGGTTCGCGGTaGAGCCTTTCTTCACTGCTTCCTGGGCATACTCCA | + |
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Preference number: 6 (lower is better) Translates to: EKTATPGSCGSR*SLSSLLPGHTP Trigger: TGGAGTATGCCCAGGAAGCAGTGAAGAAAGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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| CDS CCA 72 bp | GGAACTACAAGAGAAAACTGCCACGCCTGGTTCTTGTaGTTCGCGGTGGAGCCTTTCTTCACTGCTTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GTTRENCHAWFL*FAVEPFFTASW Trigger: CCAGGAAGCAGTGAAGAAAGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTCTTGTAGTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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| CDS CAA 90 bp | CTTCCAACAGCTGGAACTACAAGAGAAAACTGCCACGCCTGGTTCTaGTGGTTCGCGGTGGAGCCTTTCTTCACTGCTTCCTGGGCATAC | + |
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Preference number: 6 (lower is better) Translates to: LPTAGTTRENCHAWF*WFAVEPFFTASWAY Trigger: GTATGCCCAGGAAGCAGTGAAGAAAGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTCTTGTAGTTCCAGCTGTTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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| CDS GCA 72 bp | TACATCCTTCCAACAGCTGGAACTACAAGAGAAAACTaGCACGCCTGGTTCTTGTGGTTCGCGGTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: YILPTAGTTREN*HAWFLWFAVEP Trigger: AGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTCTTGTAGTTCCAGCTGTTGGAAGGATGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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| CDS CCA 72 bp | CCAACAGCTGGAACTACAAGAGAAAACTGCCACGCCTaGTTCTTGTGGTTCGCGGTGGAGCCTTTCTTCACT | + |
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Preference number: 6 (lower is better) Translates to: PTAGTTRENCHA*FLWFAVEPFFT Trigger: AGTGAAGAAAGGCTCCACCGCGAACCACAAGAACCAGGCGTGGCAGTTTTCTCTTGTAGTTCCAGCTGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234869.2 |
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