Pregenerated sensors for PSMA7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027566Ensembl transcript IDs: ENSMUST00000029082.9, ENSMUST00000129529.9
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTaGCCAGTGCCTCTTCATCAAGATGCTTTCTTTTGCTTCTTCTTT | + |
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Preference number: 1 (lower is better) Translates to: AHSTEACPDRGSKLL*PVPLHQDAFFCFFF Trigger: AAAGAAGAAGCAAAAGAAAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| 3UTR-3UTR GCA 90 bp | TCAATTTCTTCAGGATTTAGAATCTGCTCCACAAGAAGCATCACGGTTAATCTCAACGGCCCTATGGAGTaGTTCTGGGAGCAAGGCATG | + |
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Preference number: 2 (lower is better) Translates to: SISSGFRICSTRSITVNLNGPME*FWEQGM Trigger: CATGCCTTGCTCCCAGAAGCACTCCATAGGGCCGTT...GAGATTAACCGTGATGCTTCTTGTGGAGCAGATTCTAAATCCTGAAGAAATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| 3UTR CAA 90 bp | CTCAAAGCTGCTCTGACCAGTGCCTCTTCATCAAGATGCTTTCTTTaGCTTCTTCTTTTCATTTTCTTCTTTCTCCTTCTCAATTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: LKAALTSASSSRCFL*LLLFIFFFLLLNFS Trigger: GCTGAAATTGAGAAGGAGAAAGAAGAAAATGAAAAGAAGAAGCAAAAGAAAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| 3UTR-3UTR CAA 90 bp | GCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCATCAAGATGCTTATGGGAGTGGGAATGTaGTTAAGCAAGGGCCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: ARIEAQSCSDQCLFIKMLMGVGM*LSKGQE Trigger: CTCCTGGCCCTTGCTTAACAACATTCCCACTCCCAT...AAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| 3UTR TCA 72 bp | ACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTaGCCAGTGCCTCTTCATCAAGATGCTTTCTTTTGC | + |
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Preference number: 3 (lower is better) Translates to: TEACPDRGSKLL*PVPLHQDAFFC Trigger: GCAAAAGAAAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCCGGGCGAGAAGACGGTaGTGGCGCGGTCGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFRARRR*WRGRSS Trigger: TGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCG...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCGGTGGAGCCCTTTTTaGCCGCCTCCTGCGCGTACT | + |
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Preference number: 4 (lower is better) Translates to: PTAPRLARIEAQSCSDQCRWSPF*PPPART Trigger: AGTACGCGCAGGAGGCGGTCAAAAAGGGCTCCACCG...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCGTCAGCCGGTGGCTCTaGCACTCTACCCGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFVSRWL*HSTRAL Trigger: CAGAGCCCGGGTAGAGTGCCAGAGCCACCGGCTGAC...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCTCCACTGTCAGCCGGTaGCTCTGGCACTCTACCCGG | + |
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Preference number: 4 (lower is better) Translates to: PTAPRLARIEAQSCSDQCSTVSR*LWHSTR Trigger: CCGGGTAGAGTGCCAGAGCCACCGGCTGACAGTGGA...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCTGCGCGTACTCCACTTaGAAGAGGTGGCCGTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFCAYST*KRWPSG Trigger: GCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCA...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTCCACTTGGAAGAGGTaGCCGTCGGGCGAGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLSTWKR*PSGEKT Trigger: CGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGA...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCGGCCGAGATACCAAATaGCCTGCGCCCATTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PTAPRLARIEAQSCSDQCGRDTK*PAPIAL Trigger: CAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCC...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCCAGAAATTCACGCACTaGCTTGGCGCCCCGGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLQKFTH*LGAPAY Trigger: ATAGGCCGGGGCGCCAAGTCAGTGCGTGAATTTCTG...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCGTACTCCACAGTCACTaGGTCCTCCACTGTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLVLHSH*VLHCQP Trigger: CGGCTGACAGTGGAGGACCCAGTGACTGTGGAGTAC...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCTTGGCCTTCCAAGCATaGTATGTGCCCGAGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: PTAPRLARIEAQSCSDQCLAFQA*YVPEGS Trigger: TGACCCCTCGGGCACATACCATGCTTGGAAGGCCAA...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCATTCACGCACTGACTTaGCGCCCCGGCCTATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFIHALT*RPGLWH Trigger: ATGCCATAGGCCGGGGCGCCAAGTCAGTGCGTGAAT...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | CCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCATCCAGAAATTCACGCACTaGCTTGGCGCCCCGGCCTAT | + |
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Preference number: 4 (lower is better) Translates to: PRLARIEAQSCSDQCLFIQKFTH*LGAPAY Trigger: ATAGGCCGGGGCGCCAAGTCAGTGCGTGAATTTCTG...GATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTCGCAATGTAGCGGGTaGTGTACTCCACAGTCACTG | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLSQCSG*CTPQSL Trigger: CAGTGACTGTGGAGTACATCACCCGCTACATTGCGA...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCTTTTTGACCGCCTCCTaGGCGTACTCCACTTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFFLTAS*AYSTWK Trigger: CTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAAAAA...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCATGGCCTGCGCCCATTaGTCTGTGTATAACGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLMACAH*SVYNAA Trigger: AGCAGCGTTATACACAGAGCAATGGGCGCAGGCCAT...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTCCAAGCATGGTATGTaGCCGAGGGGTCAGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLSKHGM*PRGQSD Trigger: ATCAGACTGACCCCTCGGGCACATACCATGCTTGGA...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCTCCAAGCATGGTATGTaGCCGAGGGGTCAGTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFSKHGM*PRGQSD Trigger: ATCAGACTGACCCCTCGGGCACATACCATGCTTGGA...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | GTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGACGGGCGAGAAGACGGTaGTGGCGCGGTCGTAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: VGMLLSKGQELIGNSPVRRARRR*WRGRSS Trigger: TGAGCTACGACCGCGCCATCACCGTCTTCTCGCCCG...TCTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCGTTGATGACTATCCTTaGATCAGCGGTGAGACCTGC | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFVDDYP*ISGETC Trigger: GCAGGTCTCACCGCTGATGCAAGGATAGTCATCAAC...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCTTTTTGCCACCTGACTaGACCACCTCTAACAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: APRLARIEAQSCSDQCLFFLPPD*TTSNSA Trigger: GGCACTGTTAGAGGTGGTCCAGTCAGGTGGCAAAAA...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCAGATACCAAATGGCCTaGGCCCATTGCTCTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLRYQMA*AHCSVY Trigger: ATACACAGAGCAATGGGCGCAGGCCATTTGGTATCT...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCGATAGAGTCTGGGAGTaGCATCAAAGTCAAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: PTAPRLARIEAQSCSDQCDRVWE*HQSQNP Trigger: TGGGTTTTGACTTTGATGGCACTCCCAGACTCTATC...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | CAGAGGGAGTCAGATGGGAGTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATTCCACTTGGAAGAGGTaGCCGTCGGGCGAGAAGACG | + |
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Preference number: 4 (lower is better) Translates to: QRESDGSGNVVKQGPGANSTWKR*PSGEKT Trigger: CGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGA...ATTAGCTCCTGGCCCTTGCTTAACAACATTCCCACTCCCATCTGACTCCCTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGATGCGCGTACTCCACTTaGAAGAGGTGGCCGTCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VGMLLSKGQELIGNSPVRCAYST*KRWPSG Trigger: GCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCA...TCTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | AGTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGGTACTCCACAGTCACTaGGTCCTCCACTGTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: SGNVVKQGPGANRKQPCEVLHSH*VLHCQP Trigger: CGGCTGACAGTGGAGGACCCAGTGACTGTGGAGTAC...CTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGAGGCCGAGATACCAAATaGCCTGCGCCCATTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VGMLLSKGQELIGNSPVRGRDTK*PAPIAL Trigger: CAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCC...TCTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| 3UTR CAA 72 bp | CCTCGAAGCAGAGGGAGTCAGATGGGAGTGGGAATGTaGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGC | + |
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Preference number: 4 (lower is better) Translates to: PRSRGSQMGVGM*LSKGQELIGNS Trigger: GCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCACTCCCATCTGACTCCCTCTGCTTCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGATTGGCCTTCCAAGCATaGTATGTGCCCGAGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: VGMLLSKGQELIGNSPVRLAFQA*YVPEGS Trigger: TGACCCCTCGGGCACATACCATGCTTGGAAGGCCAA...TCTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | ATGGGAGTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTATGGCCTGCGCCCATTaGTCTGTGTATAACGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: MGVGMLLSKGQELIGNSPMACAH*SVYNAA Trigger: AGCAGCGTTATACACAGAGCAATGGGCGCAGGCCAT...AGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCACTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCGATCATCTGTTTCAATaGCATCATCTGTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TAPRLARIEAQSCSDQCLDHLFQ*HHLCSS Trigger: AGAACTACACAGATGATGCCATTGAAACAGATGATC...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR GCA 90 bp | GCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCATCAAGATGCTTGATAGAGTCTGGGAGTaGCATCAAAGTCAAAACCCA | + |
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Preference number: 4 (lower is better) Translates to: ARIEAQSCSDQCLFIKMLDRVWE*HQSQNP Trigger: TGGGTTTTGACTTTGATGGCACTCCCAGACTCTATC...AAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | AGTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGTTTTTGCCACCTGACTaGACCACCTCTAACAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SGNVVKQGPGANRKQPCEFLPPD*TTSNSA Trigger: GGCACTGTTAGAGGTGGTCCAGTCAGGTGGCAAAAA...CTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR TCA 90 bp | TCAATTTCTTCAGGATTTAGAATCTGCTCCACAAGAAGCATCACGGTTAATCTCCGGTGGAGCCCTTTTTaGCCGCCTCCTGCGCGTACT | + |
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Preference number: 4 (lower is better) Translates to: SISSGFRICSTRSITVNLRWSPF*PPPART Trigger: AGTACGCGCAGGAGGCGGTCAAAAAGGGCTCCACCG...GAGATTAACCGTGATGCTTCTTGTGGAGCAGATTCTAAATCCTGAAGAAATTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | TCAATTTCTTCAGGATTTAGAATCTGCTCCACAAGAAGCATCACGGTTAATCTCTCCACTGTCAGCCGGTaGCTCTGGCACTCTACCCGG | + |
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Preference number: 4 (lower is better) Translates to: SISSGFRICSTRSITVNLSTVSR*LWHSTR Trigger: CCGGGTAGAGTGCCAGAGCCACCGGCTGACAGTGGA...GAGATTAACCGTGATGCTTCTTGTGGAGCAGATTCTAAATCCTGAAGAAATTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CCA 90 bp | GCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCATCAAGATGCTTGATCATCTGTTTCAATaGCATCATCTGTGTAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: ARIEAQSCSDQCLFIKMLDHLFQ*HHLCSS Trigger: AGAACTACACAGATGATGCCATTGAAACAGATGATC...AAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTGCGCGTACTCCACTaGGAAGAGGTGGCCGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: PTAPRLARIEAQSCSDQCLRVLH*EEVAVG Trigger: CCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAG...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCGCGGTGGAGCCCTTTTaGACCGCCTCCTGCGCGTAC | + |
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Preference number: 5 (lower is better) Translates to: PTAPRLARIEAQSCSDQCAVEPF*TASCAY Trigger: GTACGCGCAGGAGGCGGTCAAAAAGGGCTCCACCGC...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | ACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCGCGGTGGAGCCCTTTTaGACCGCCTCCTGCGCGTAC | + |
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Preference number: 5 (lower is better) Translates to: TAPRLARIEAQSCSDQCLAVEPF*TASCAY Trigger: GTACGCGCAGGAGGCGGTCAAAAAGGGCTCCACCGC...GAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | GCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCATCAAGATGCTTCTGCGCGTACTCCACTaGGAAGAGGTGGCCGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: ARIEAQSCSDQCLFIKMLLRVLH*EEVAVG Trigger: CCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAG...AAGCATCTTGATGAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | CCCACAGCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCTCTACCCGGGCTCTGTaGATGACTATCCTTGCATCA | + |
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Preference number: 5 (lower is better) Translates to: PTAPRLARIEAQSCSDQCSTRAL*MTILAS Trigger: TGATGCAAGGATAGTCATCAACAGAGCCCGGGTAGA...GCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGCTGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | GCACCGAGGCTTGCCCGGATAGAGGCTCAAAGCTGCTCTGACCAGTGCCTCTTCGCAAGTTCGATGTTTTaGCCACCTGACTGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: APRLARIEAQSCSDQCLFASSMF*PPDWTT Trigger: GGTGGTCCAGTCAGGTGGCAAAAACATCGAACTTGC...GAAGAGGCACTGGTCAGAGCAGCTTTGAGCCTCTATCCGGGCAAGCCTCGGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS-3UTR CAA 90 bp | GTGGGAATGTTGTTAAGCAAGGGCCAGGAGCTAATAGGAAACAGCCCTGTGAGAGCAAGTTCGATGTTTTaGCCACCTGACTGGACCACC | + |
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Preference number: 5 (lower is better) Translates to: VGMLLSKGQELIGNSPVRASSMF*PPDWTT Trigger: GGTGGTCCAGTCAGGTGGCAAAAACATCGAACTTGC...TCTCACAGGGCTGTTTCCTATTAGCTCCTGGCCCTTGCTTAACAACATTCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129529.9 |
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| CDS GCA 90 bp | AAGCATGGTATGTGCCCGAGGGGTCAGTCTGATAGAGTCTGGGAGTaGCATCAAAGTCAAAACCCACAATTAGGGCCGAGATACCAAATG | + |
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Preference number: 5 (lower is better) Translates to: KHGMCPRGQSDRVWE*HQSQNPQLGPRYQM Trigger: CATTTGGTATCTCGGCCCTAATTGTGGGTTTTGACTTTGATGGCACTCCCAGACTCTATCAGACTGACCCCTCGGGCACATACCATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS GCA 90 bp | CATCAAAGTCAAAACCCACAATTAGGGCCGAGATACCAAATGGCCTaGGCCCATTGCTCTGTGTATAACGCTGCTTCAGACTCGCAATGT | + |
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Preference number: 5 (lower is better) Translates to: HQSQNPQLGPRYQMA*AHCSVYNAASDSQC Trigger: ACATTGCGAGTCTGAAGCAGCGTTATACACAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCCCTAATTGTGGGTTTTGACTTTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS CCA 72 bp | TTGACCGCCTCCTGCGCGTACTCCACTTGGAAGAGGTaGCCGTCGGGCGAGAAGACGGTGATGGCGCGGTCG | + |
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Preference number: 6 (lower is better) Translates to: LTASCAYSTWKR*PSGEKTVMARS Trigger: CGACCGCGCCATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS CCA 72 bp | GAGCCCTTTTTGACCGCCTCCTGCGCGTACTCCACTTaGAAGAGGTGGCCGTCGGGCGAGAAGACGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: EPFLTASCAYST*KRWPSGEKTVM Trigger: CATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAAAAAGGGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS CAA 72 bp | GGAGCCCTTTTTGACCGCCTCCTGCGCGTACTCCACTaGGAAGAGGTGGCCGTCGGGCGAGAAGACGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: GALFDRLLRVLH*EEVAVGREDGD Trigger: ATCACCGTCTTCTCGCCCGACGGCCACCTCTTCCAAGTGGAGTACGCGCAGGAGGCGGTCAAAAAGGGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS GCA 72 bp | TCTGTTGATGACTATCCTTGCATCAGCGGTGAGACCTaGAAAGGCCATACAGACGTTATCGTCCAAGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SVDDYPCISGET*KGHTDVIVQGA Trigger: TGCGCCTTGGACGATAACGTCTGTATGGCCTTTGCAGGTCTCACCGCTGATGCAAGGATAGTCATCAACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS GCA 72 bp | CAATTAGGGCCGAGATACCAAATGGCCTGCGCCCATTaGTCTGTGTATAACGCTGCTTCAGACTCGCAATGT | + |
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Preference number: 6 (lower is better) Translates to: QLGPRYQMACAH*SVYNAASDSQC Trigger: ACATTGCGAGTCTGAAGCAGCGTTATACACAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCCCTAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS GCA 72 bp | CAAAACCCACAATTAGGGCCGAGATACCAAATGGCCTaGGCCCATTGCTCTGTGTATAACGCTGCTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: QNPQLGPRYQMA*AHCSVYNAASD Trigger: GTCTGAAGCAGCGTTATACACAGAGCAATGGGCGCAGGCCATTTGGTATCTCGGCCCTAATTGTGGGTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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| CDS CCA 72 bp | CTCATGACGGCAAGTTCGATGTTTTTGCCACCTGACTaGACCACCTCTAACAGTGCCTTGATCACAAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LMTASSMFLPPD*TTSNSALITSL Trigger: CAAACTTGTGATCAAGGCACTGTTAGAGGTGGTCCAGTCAGGTGGCAAAAACATCGAACTTGCCGTCATGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029082.9 ENSMUST00000129529.9 |
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