Pregenerated sensors for PSMA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068749Ensembl transcript IDs: ENSMUST00000090569.10, ENSMUST00000129708.3
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGATCACCTCCTCCAGTTCTTCCTTTGTGAACATGTGGAAATTCTaGCCAGGCTGCACCGTGGCTAGCCAGTCCTTTCCTTCATTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LITSSSSSFVNMWKF*PGCTVASQSFPSFL Trigger: TAAGAATGAAGGAAAGGACTGGCTAGCCACGGTGCAGCCTGGTCAGAATTTCCACATGTTCACAAAGGAAGAACTGGAGGAGGTGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| 3UTR-3UTR CCA 90 bp | GACGGCTCCTTCTTAAATGTCCTTGATCACCTCCTCCAGTTCTTCCTTTGTGAAGACCAGGCTGCACCGTaGCTAGCCAGTCCTTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: DGSFLNVLDHLLQFFLCEDQAAP*LASPFL Trigger: AAGGAAAGGACTGGCTAGCCACGGTGCAGCCTGGTC...TTCACAAAGGAAGAACTGGAGGAGGTGATCAAGGACATTTAAGAAGGAGCCGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS-3UTR CCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCACTGCAGAGCCAGATTaGACACAGCCTGGGTCACAC | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSTAEPD*TQPGSH Trigger: GTGTGACCCAGGCTGTGTCCAATCTGGCTCTGCAGT...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR TCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCCCAGATGGGTCCATGTaGAACAGTTGGGGTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSPDGSM*NSWGPF Trigger: GAAAGGACCCCAACTGTTTCACATGGACCCATCTGG...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR TCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCAACATGTGGAAATTCTaGCCAGGCTGCACCGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSNMWKF*PGCTVA Trigger: AGCCACGGTGCAGCCTGGTCAGAATTTCCACATGTT...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCACACCCTCTGAGGTCTaGATGCCAATGGCTGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSTPSEV*MPMAVE Trigger: TTCTACAGCCATTGGCATCCAGACCTCAGAGGGTGT...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCAGAAGCAGAGCCAATTaGTCGAGCATCACACTGTAC | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSRSRAN*SSITLY Trigger: GTACAGTGTGATGCTCGAGCAATTGGCTCTGCTTCT...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCACGAGACATAGCACCTaGATCTGCATCTTCTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSTRHST*ICIFFS Trigger: GGAGAAGAAGATGCAGATCCAGGTGCTATGTCTCGT...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCTCTTCTTCTCCAAACTaGAGAGCCAGATTGGACACA | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSSSSPN*RARLDT Trigger: TGTGTCCAATCTGGCTCTGCAGTTTGGAGAAGAAGA...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCCATAGCACCTGGATCTaGATCTTCTTCTCCAAACTG | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSHSTWI*IFFSKL Trigger: CAGTTTGGAGAAGAAGATGCAGATCCAGGTGCTATG...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR GCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCTCCTCCAAACAACAATaGTACTCCAAAGGGACGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSSSKQQ*YSKGTR Trigger: TCTCGTCCCTTTGGAGTAGCATTGTTGTTTGGAGGA...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCTACAAAGGTCCCAGATaGGTCCATGTGAAACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSYKGPR*VHVKQL Trigger: CAACTGTTTCACATGGACCCATCTGGGACCTTTGTA...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR TCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCCCAGTTCTTCCTTTGTaGACATGTGGAAATTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSPVLPL*TCGNSD Trigger: GTCAGAATTTCCACATGTTCACAAAGGAAGAACTGG...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR GCA 90 bp | AAGTTCGAGGACGGCTCCTTCTTAAATGTCCTTGATCACCTCCTCCAGTTCTTCATGCTCGATGTTGGTTaGATTCAGCTTCTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: KFEDGSFLNVLDHLLQFFMLDVG*IQLLLH Trigger: ATGGAGGAGAAGCTGAATGCAACCAACATCGAGCAT...GAAGAACTGGAGGAGGTGATCAAGGACATTTAAGAAGGAGCCGTCCTCGAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS-3UTR CCA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCCAATTAGCCCACTCATaGCACAACCTATATGAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SLRAIRTESVPQKFEDGSQLAHS*HNLYEH Trigger: ATGCTCATATAGGTTGTGCCATGAGTGGGCTAATTG...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS GCA 90 bp | AAGGGACGAGACATAGCACCTGGATCTGCATCTTCTTCTCCAAACTaGAGAGCCAGATTGGACACAGCCTGGGTCACACTCTCAACTGTC | + |
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Preference number: 5 (lower is better) Translates to: KGRDIAPGSASSSPN*RARLDTAWVTLSTV Trigger: GACAGTTGAGAGTGTGACCCAGGCTGTGTCCAATCTGGCTCTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCTATGTCTCGTCCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS GCA 90 bp | GTGGCTAGCTCGATGTTGGTTGCATTCAGCTTCTCCTCCATGACTTaGTTGAGGATGATGAGCGAGGACTTGATGGCCTCCTTCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: VASSMLVAFSFSSMT*LRMMSEDLMASFRV Trigger: GACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGAGCTAGCCAC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCAACTGCAGAGCCAGATaGGACACAGCCTGGGTCACA | + |
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Preference number: 5 (lower is better) Translates to: SLRAIRTESVPQKFEDGSNCRAR*DTAWVT Trigger: TGTGACCCAGGCTGTGTCCAATCTGGCTCTGCAGTT...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCTCCTCCATGACTTGCTaGAGGATGATGAGCGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SLRAIRTESVPQKFEDGSSSMTC*RMMSED Trigger: GTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGA...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090569.10 ENSMUST00000129708.3 |
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| CDS TCA 90 bp | TTGATCACCTCCTCCAGTTCTTCCTTTGTGAACATGTGGAAATTCTaGCCAGGCTGCACCGTGGCTAGCTCGATGTTGGTTGCATTCAGC | + |
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Preference number: 5 (lower is better) Translates to: LITSSSSSFVNMWKF*PGCTVASSMLVAFS Trigger: GCTGAATGCAACCAACATCGAGCTAGCCACGGTGCAGCCTGGTCAGAATTTCCACATGTTCACAAAGGAAGAACTGGAGGAGGTGATCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS GCA 90 bp | TGCAAATGCTCGATGTTGGTTGCATTCAGCTTCTCCTCCATGACTTaGTTGAGGATGATGAGCGAGGACTTGATGGCCTCCTTCAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: CKCSMLVAFSFSSMT*LRMMSEDLMASFRV Trigger: GACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGAGCATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCCTTATGGTAAACTTCTaGCAAGGAGCTCTGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: SLRAIRTESVPQKFEDGSLMVNF*QGALGT Trigger: GGTGCCCAGAGCTCCTTGCAAGAAGTTTACCATAAG...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090569.10 ENSMUST00000129708.3 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCCTAGCTCGATGTTGGTaGCATTCAGCTTCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SLRAIRTESVPQKFEDGSLARCW*HSASPP Trigger: TGGAGGAGAAGCTGAATGCAACCAACATCGAGCTAG...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCGTCCATGTGAAACAGTaGGGGTCCTTTCTCATCAAC | + |
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Preference number: 5 (lower is better) Translates to: SLRAIRTESVPQKFEDGSVHVKQ*GSFLIN Trigger: GTTGATGAGAAAGGACCCCAACTGTTTCACATGGAC...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CAA 90 bp | AAGTTCGAGGACGGCTCCTTCTTAAATGTCCTTGATCACCTCCTCCAGTTCTTCCTTATGGTAAACTTCTaGCAAGGAGCTCTGGGCACC | + |
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Preference number: 5 (lower is better) Translates to: KFEDGSFLNVLDHLLQFFLMVNF*QGALGT Trigger: GGTGCCCAGAGCTCCTTGCAAGAAGTTTACCATAAG...GAAGAACTGGAGGAGGTGATCAAGGACATTTAAGAAGGAGCCGTCCTCGAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS-3UTR CAA 90 bp | GGCTGCACCGTGGCTAGCCAGTCCTTTCCTTCATTCTTAAATCCACTGTACTTGTGCAAATGCTCGATGTaGGTTGCATTCAGCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: GCTVASQSFPSFLNPLYLCKCSM*VAFSFS Trigger: GGAGAAGCTGAATGCAACCAACATCGAGCATTTGCA...CAAGTACAGTGGATTTAAGAATGAAGGAAAGGACTGGCTAGCCACGGTGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS-3UTR CAA 90 bp | AGTCTAAGGGCAATTAGAACTGAAAGTGTCCCACAGAAGTTCGAGGACGGCTCCGCTGTAGAACCAAGCTaGATAGCCTCAATGGCATAT | + |
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Preference number: 5 (lower is better) Translates to: SLRAIRTESVPQKFEDGSAVEPS*IASMAY Trigger: ATATGCCATTGAGGCTATCAAGCTTGGTTCTACAGC...GGAGCCGTCCTCGAACTTCTGTGGGACACTTTCAGTTCTAATTGCCCTTAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS-3UTR CAA 90 bp | GTCCTTTCCTTCATTCTTAAATCCACTGTACTTGGCTCCCATCATCACCACTTCTCCTCCATGACTTGCTaGAGGATGATGAGCGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: VLSFILKSTVLGSHHHHFSSMTC*RMMSED Trigger: GTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGA...GAAGTGGTGATGATGGGAGCCAAGTACAGTGGATTTAAGAATGAAGGAAAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS-3UTR CAA 90 bp | GTCCTTTCCTTCATTCTTAAATCCACTGTACTTGGCTCCCATCATCACCACTTCAATGCTCGATGTTGGTaGCATTCAGCTTCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: VLSFILKSTVLGSHHHHFNARCW*HSASPP Trigger: TGGAGGAGAAGCTGAATGCAACCAACATCGAGCATT...GAAGTGGTGATGATGGGAGCCAAGTACAGTGGATTTAAGAATGAAGGAAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS GCA 72 bp | GACATAGCACCTGGATCTGCATCTTCTTCTCCAAACTaGAGAGCCAGATTGGACACAGCCTGGGTCACACTC | + |
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Preference number: 6 (lower is better) Translates to: DIAPGSASSSPN*RARLDTAWVTL Trigger: GAGTGTGACCCAGGCTGTGTCCAATCTGGCTCTGCAGTTTGGAGAAGAAGATGCAGATCCAGGTGCTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS GCA 72 bp | TCGATGTTGGTTGCATTCAGCTTCTCCTCCATGACTTaGTTGAGGATGATGAGCGAGGACTTGATGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMLVAFSFSSMT*LRMMSEDLMAS Trigger: GGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090569.10 ENSMUST00000129708.3 |
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| CDS CCA 72 bp | CTCTTCTCCACAGCTAGACATACACCCTCTGAGGTCTaGATGCCAATGGCTGTAGAACCAAGCTTGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: LFSTARHTPSEV*MPMAVEPSLIA Trigger: GGCTATCAAGCTTGGTTCTACAGCCATTGGCATCCAGACCTCAGAGGGTGTATGTCTAGCTGTGGAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS CAA 90 bp | GCTAGCTCGATGTTGGTTGCATTCAGCTTCTCCTCCATGACTTGCTaGAGGATGATGAGCGAGGACTTGATGGCCTCCTTCAGAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: ASSMLVAFSFSSMTC*RMMSEDLMASFRVI Trigger: TATGACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGAGCTAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090569.10 |
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| CDS CAA 72 bp | ATGTTGGTTGCATTCAGCTTCTCCTCCATGACTTGCTaGAGGATGATGAGCGAGGACTTGATGGCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: MLVAFSFSSMTC*RMMSEDLMASF Trigger: GAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090569.10 ENSMUST00000129708.3 |
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| CDS CAA 90 bp | ATGCAAATGCTCGATGTTGGTTGCATTCAGCTTCTCCTCCATGACTaGCTTGAGGATGATGAGCGAGGACTTGATGGCCTCCTTCAGAGT | + |
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Preference number: 6 (lower is better) Translates to: MQMLDVGCIQLLLHD*LEDDERGLDGLLQS Trigger: ACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGAGCATTTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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| CDS CAA 90 bp | AAATGCTCGATGTTGGTTGCATTCAGCTTCTCCTCCATGACTTGCTaGAGGATGATGAGCGAGGACTTGATGGCCTCCTTCAGAGTCATA | + |
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Preference number: 6 (lower is better) Translates to: KCSMLVAFSFSSMTC*RMMSEDLMASFRVI Trigger: TATGACTCTGAAGGAGGCCATCAAGTCCTCGCTCATCATCCTCAAGCAAGTCATGGAGGAGAAGCTGAATGCAACCAACATCGAGCATTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129708.3 |
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