Pregenerated sensors for PSMA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030751Ensembl transcript IDs: ENSMUST00000033008.10, ENSMUST00000135570.8
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | ACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCCTCAGCAGCCTGTaGAGGCTGTGCTTTTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TAAVGLKYRLLSPVYVPAFLSSL*RLCFSL Trigger: CAGAGAAAAGCACAGCCTTCACAGGCTGCTGAGGAA...TGCAGGGACATACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR GCA 90 bp | ACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTTTCTGTGCTCTCTTCAGTaGAACCAGCACTGCGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: TDYCRQCMSLHSYVLVTFLCSLQ*NQHCVR Trigger: ACGCACGCAGTGCTGGTTGCACTGAAGAGAGCACAG...AAAGGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR GCA 90 bp | CAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTATGTCCTGTGCTCTCTTCAGTaGAACCAGCACTGCGTGCGT | + |
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Preference number: 4 (lower is better) Translates to: QYTAAVGLKYRLLSPVYVLCSLQ*NQHCVR Trigger: ACGCACGCAGTGCTGGTTGCACTGAAGAGAGCACAG...GACATACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR TCA 90 bp | AATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCCATCATAACCAGCAATaGGCAGCCCAACACCATACG | + |
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Preference number: 4 (lower is better) Translates to: NTDYCRQCMSLHSYVLVTHHNQQ*AAQHHT Trigger: CGTATGGTGTTGGGCTGCTCATTGCTGGTTATGATG...GGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR TCA 90 bp | CACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTACATCATAACCAGCAATaGGCAGCCCAACACCATACG | + |
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Preference number: 4 (lower is better) Translates to: HPIHCSCWFKIQIIVASVHHNQQ*AAQHHT Trigger: CGTATGGTGTTGGGCTGCTCATTGCTGGTTATGATG...TACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR TCA 90 bp | CACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTAAGAATTTTCTTCTGGTaGGCGGCAAGCTCTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: HPIHCSCWFKIQIIVASVRIFFW*AASSDC Trigger: ACAGTCAGAGCTTGCCGCTCACCAGAAGAAAATTCT...TACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR GCA 90 bp | ACATACCACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCCAATTTGATGAATCCTaGCCTGAGGGCTCCAAACAG | + |
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Preference number: 4 (lower is better) Translates to: TYHPIHCSCWFKIQIIVAQFDES*PEGSKQ Trigger: CTGTTTGGAGCCCTCAGGGCAGGATTCATCAAATTG...GGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTGGTATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033008.10 |
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| CDS-3UTR CCA 90 bp | CAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTATGTCGCCATATCGCTGTGTTaGGATCTGGGTTTTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: QYTAAVGLKYRLLSPVYVAISLC*DLGFAS Trigger: GGAAGCAAAACCCAGATCCCAACACAGCGATATGGC...GACATACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | AATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTGGAAACATTCTTTGTaGTCAGGTCCTGCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: NTDYCRQCMSLHSYVLVTWKHSL*SGPALQ Trigger: CTGCAGAGCAGGACCTGACCACAAAGAATGTTTCCA...GGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | GATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTTTATCTGGAAACATTCTTTGTaGTCAGGTCCTGCTCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: DYCRQCMSLHSYVLVTFIWKHSL*SGPALQ Trigger: CTGCAGAGCAGGACCTGACCACAAAGAATGTTTCCA...GATAAAGGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | CACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTACGCTGTGTTGGGATCTaGGTTTTGCTTCCAATTAGA | + |
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Preference number: 4 (lower is better) Translates to: HPIHCSCWFKIQIIVASVRCVGI*VLLPIR Trigger: TCTAATTGGAAGCAAAACCCAGATCCCAACACAGCG...TACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR TCA 90 bp | TTTAAAATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGAGAATTTTCTTCTGGTaGGCGGCAAGCTCTGACTGT | + |
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Preference number: 4 (lower is better) Translates to: FKIQIIVASVCPCILMSLRIFFW*AASSDC Trigger: ACAGTCAGAGCTTGCCGCTCACCAGAAGAAAATTCT...CAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATTTTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | GATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTTTATCGAATCCAAACACTCCTaGCGCATAAAGTTGCATAAC | + |
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Preference number: 4 (lower is better) Translates to: DYCRQCMSLHSYVLVTFIESKHS*RIKLHN Trigger: GTTATGCAACTTTATGCGCCAGGAGTGTTTGGATTC...GATAAAGGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | TACCACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGAATCCAAACACTCCTaGCGCATAAAGTTGCATAAC | + |
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Preference number: 4 (lower is better) Translates to: YHPIHCSCWFKIQIIVASESKHS*RIKLHN Trigger: GTTATGCAACTTTATGCGCCAGGAGTGTTTGGATTC...ACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | AAAACATACCACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCATATCGCTGTGTTaGGATCTGGGTTTTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: KTYHPIHCSCWFKIQIIVAISLC*DLGFAS Trigger: GGAAGCAAAACCCAGATCCCAACACAGCGATATGGC...GACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTGGTATGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR GCA 90 bp | AATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTTGGGATCTGGGTTTTaGTTCCAATTAGAGACACAA | + |
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Preference number: 4 (lower is better) Translates to: NTDYCRQCMSLHSYVLVTLGSGF*FQLETQ Trigger: TTGTGTCTCTAATTGGAAGCAAAACCCAGATCCCAA...GGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR GCA 90 bp | TACCACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTTTGGGATCTGGGTTTTaGTTCCAATTAGAGACACAA | + |
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Preference number: 4 (lower is better) Translates to: YHPIHCSCWFKIQIIVASLGSGF*FQLETQ Trigger: TTGTGTCTCTAATTGGAAGCAAAACCCAGATCCCAA...ACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| 3UTR CAA 72 bp | CAATACACTGCAGCTGTTGGTTTAAAATACAGATTATaGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCT | + |
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Preference number: 4 (lower is better) Translates to: QYTAAVGLKYRL*SPVYVPAFLCP Trigger: AGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | AATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTACCAACGATTCCAATaGAAACATTCTTTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: NTDYCRQCMSLHSYVLVTYQRFQ*KHSLWS Trigger: TGACCACAAAGAATGTTTCCATTGGAATCGTTGGTA...GGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CCA 90 bp | CAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCAGTGTATGTCTACCAACGATTCCAATaGAAACATTCTTTGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QYTAAVGLKYRLLSPVYVYQRFQ*KHSLWS Trigger: TGACCACAAAGAATGTTTCCATTGGAATCGTTGGTA...GACATACACTGGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CAA 90 bp | AATACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTCCTGGCGCATAAAGTaGCATAACAGTCTGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: NTDYCRQCMSLHSYVLVTSWRIK*HNSLAS Trigger: TGATGCCAGACTGTTATGCAACTTTATGCGCCAGGA...GGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CAA 90 bp | TACAGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTTGTTGGGATCTGGGTTTaGCTTCCAATTAGAGACACA | + |
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Preference number: 5 (lower is better) Translates to: YRLLSPVYVPAFLCPCNLVGIWV*LPIRDT Trigger: TGTGTCTCTAATTGGAAGCAAAACCCAGATCCCAAC...AAGGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CAA 90 bp | ACATACCACCCAATACACTGCAGCTGTTGGTTTAAAATACAGATTATTGTCGCCGTTGGGATCTGGGTTTaGCTTCCAATTAGAGACACA | + |
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Preference number: 5 (lower is better) Translates to: TYHPIHCSCWFKIQIIVAVGIWV*LPIRDT Trigger: TGTGTCTCTAATTGGAAGCAAAACCCAGATCCCAAC...GGCGACAATAATCTGTATTTTAAACCAACAGCTGCAGTGTATTGGGTGGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CAA 90 bp | AGATTATTGTCGCCAGTGTATGTCCCTGCATTCTTATGTCCTTGTAACCTTTATCAATGGAAACATTCTTaGTGGTCAGGTCCTGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RLLSPVYVPAFLCPCNLYQWKHS*WSGPAL Trigger: CAGAGCAGGACCTGACCACAAAGAATGTTTCCATTG...ATAAAGGTTACAAGGACATAAGAATGCAGGGACATACACTGGCGACAATAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033008.10 ENSMUST00000135570.8 |
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| CDS-3UTR CAA 90 bp | GGACTGATTTCTAAAACATACCACCCAATACACTGCAGCTGTTGGTTTAAAATATCCTGGCGCATAAAGTaGCATAACAGTCTGGCATCA | + |
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Preference number: 5 (lower is better) Translates to: GLISKTYHPIHCSCWFKISWRIK*HNSLAS Trigger: TGATGCCAGACTGTTATGCAACTTTATGCGCCAGGA...TATTTTAAACCAACAGCTGCAGTGTATTGGGTGGTATGTTTTAGAAATCAGTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033008.10 |
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