Pregenerated sensors for PSKH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048310Ensembl transcript IDs: ENSMUST00000049699.9
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCACCCCCTCCCCTGGCCACCTATACCCAGACCAGACACGAGGTaGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCTCCAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: HHPLPWPPIPRPDTR*RNGAIKEGQAAPEG Trigger: TCCTTCTGGAGCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGCCAGGGGAGGGGGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 90 bp | CACGACAGCTATAGGGACTGTTGTGGCTCAGTCCCTTGGGAAAGCTaGCCCTGTAACCCTACCCTACCTCCCAGCCTGAGACTCGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: HDSYRDCCGSVPWES*PCNPTLPPSLRLGG Trigger: CCCACCGAGTCTCAGGCTGGGAGGTAGGGTAGGGTTACAGGGGCAGCTTTCCCAAGGGACTGAGCCACAACAGTCCCTATAGCTGTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 90 bp | CAGCACGGAGCTCCCTTAACCCCTCACTGTTGGGAAGGAGGCAGCTaGGGAATGAAATGGCGTCCTCCTGGTGGAGAGACAGGCGACAGT | + |
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Preference number: 1 (lower is better) Translates to: QHGAPLTPHCWEGGS*GMKWRPPGGETGDS Trigger: ACTGTCGCCTGTCTCTCCACCAGGAGGACGCCATTTCATTCCCCAGCTGCCTCCTTCCCAACAGTGAGGGGTTAAGGGAGCTCCGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 90 bp | CCTCCCCTGGCCACCTATACCCAGACCAGACACGAGGTGGCGCAATaGAGCTATAAAGGAGGGCCAGGCAGCTCCAGAAGGAAGCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: PPLATYTQTRHEVAQ*SYKGGPGSSRRKQQ Trigger: TTGCTGCTTCCTTCTGGAGCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGCCAGGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 90 bp | ACGGAGGGTGACAGACAGGATTCCTCTCATAGAGAGGCTGGAGCCTaGGGTCAAGGGCCATGCCACAGTCTCTACAGCCAGAGGTCCTGG | + |
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Preference number: 1 (lower is better) Translates to: TEGDRQDSSHREAGA*GQGPCHSLYSQRSW Trigger: CCAGGACCTCTGGCTGTAGAGACTGTGGCATGGCCCTTGACCTCAGGCTCCAGCCTCTCTATGAGAGGAATCCTGTCTGTCACCCTCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 90 bp | CAAGGGCCATGCCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTaGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAGACAGACAGA | + |
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Preference number: 1 (lower is better) Translates to: QGPCHSLYSQRSWQV*GLEGVPGGTMKTDR Trigger: TCTGTCTGTCTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCATGGCCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 90 bp | GAGGTGGCATATGTAGAAAAGAGCGCCTCGCCCAAGGCTGCCTCCTaGGAGGAGCTGAGTGGAGCTAGACTCTTCCTGCTGACAGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: EVAYVEKSASPKAAS*EELSGARLFLLTGS Trigger: AGAGCCTGTCAGCAGGAAGAGTCTAGCTCCACTCAGCTCCTCTCAGGAGGCAGCCTTGGGCGAGGCGCTCTTTTCTACATATGCCACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 90 bp | GAGGCTTTGGCTCTCCACTGCCTCCTACCCAGGGGGAGGGGTGTGTaGAGAGAGCATATAGAAGGCACAGTTGACTTGGCACAGAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: EALALHCLLPRGRGV*REHIEGTVDLAQSG Trigger: ACCACTCTGTGCCAAGTCAACTGTGCCTTCTATATGCTCTCTTCACACACCCCTCCCCCTGGGTAGGAGGCAGTGGAGAGCCAAAGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 90 bp | ATGAAATGGCGTCCTCCTGGTGGAGAGACAGGCGACAGTGGGCTCTaGAAAGGCACGGAGGGTGACAGACAGGATTCCTCTCATAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: MKWRPPGGETGDSGL*KGTEGDRQDSSHRE Trigger: CTCTCTATGAGAGGAATCCTGTCTGTCACCCTCCGTGCCTTTGCAGAGCCCACTGTCGCCTGTCTCTCCACCAGGAGGACGCCATTTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 90 bp | CTTTCTTTCCTAGTCCGTTTAGAGGGCTGTGGGTTTGCAAGGTTGTaGATCCGTCACCACCCCCTCCCCTGGCCACCTATACCCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: LSFLVRLEGCGFARL*IRHHPLPWPPIPRP Trigger: TGGTCTGGGTATAGGTGGCCAGGGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGGACTAGGAAAGAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 90 bp | CTAAGTTCCAGGGTGAGGTTTGGAGAAACTGAGCAGAAGAGGAGTTaGGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LSSRVRFGETEQKRS*AAQDSPPIQQRLSF Trigger: GAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCTTCTGCTCAGTTTCTCCAAACCTCACCCTGGAACTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 90 bp | ACCCAGGGGGAGGGGTGTGTGAAGAGAGCATATAGAAGGCACAGTTaGCTTGGCACAGAGTGGTCTCTTTGGTTTAGTTTCCCAGTGGAG | + |
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Preference number: 1 (lower is better) Translates to: TQGEGCVKRAYRRHS*LGTEWSLWFSFPVE Trigger: CTCCACTGGGAAACTAAACCAAAGAGACCACTCTGTGCCAAGTCAACTGTGCCTTCTATATGCTCTCTTCACACACCCCTCCCCCTGGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | ACCACCCCCTCCCCTGGCCACCTATACCCAGACCAGACACGAGGTGGCGCAATGAGAGAGGCTGGAGCCTaGGGTCAAGGGCCATGCCAC | + |
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Preference number: 2 (lower is better) Translates to: TTPSPGHLYPDQTRGGAMREAGA*GQGPCH Trigger: GTGGCATGGCCCTTGACCTCAGGCTCCAGCCTCTCT...CATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGCCAGGGGAGGGGGTGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | TGTAACCCTACCCTACCTCCCAGCCTGAGACTCGGTGGGGCCAGCCTGGAAAGTCAAAGGCACGGAGGGTaGCAGACAGGATTCCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: CNPTLPPSLRLGGASLESQRHGG*QTGFLS Trigger: TGAGAGGAATCCTGTCTGTCACCCTCCGTGCCTTTG...ACTTTCCAGGCTGGCCCCACCGAGTCTCAGGCTGGGAGGTAGGGTAGGGTTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | CCGTTTAGAGGGCTGTGGGTTTGCAAGGTTGTGCATCCGTCACCACCCCCTCCCTTAACCCCTCACTGTTaGGAAGGAGGCAGCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: PFRGLWVCKVVHPSPPPPLTPHC*EGGSWG Trigger: TCCCCAGCTGCCTCCTTCCCAACAGTGAGGGGTTAA...GGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CAA 90 bp | CGCCTTTCTTTCCTAGTCCGTTTAGAGGGCTGTGGGTTTGCAAGGTaGTGCATCCGTCACCACCCCCTCCCCTGGCCACCTATACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: RLSFLVRLEGCGFAR*CIRHHPLPWPPIPR Trigger: TCTGGGTATAGGTGGCCAGGGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGGACTAGGAAAGAAAGGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | GAGACAGGCGACAGTGGGCTCTGCAAAGGCACGGAGGGTGACAGACAGGATTCCGGTATTAGGCCCAGGTaGCATGGCAGAAAGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: ETGDSGLCKGTEGDRQDSGIRPR*HGRKCP Trigger: TGGACACTTTCTGCCATGTCACCTGGGCCTAATACC...GGAATCCTGTCTGTCACCCTCCGTGCCTTTGCAGAGCCCACTGTCGCCTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCGAGGCAGCTGGGGAATaGAATGGCGTCCTCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSEAAGE*NGVLLV Trigger: CACCAGGAGGACGCCATTTCATTCCCCAGCTGCCTC...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACCTATACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCAGACAGATCTTGGCTaGGGGAGAGAGGGTTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ATYTQTRHEVAQWSYKGGQTDLG*GREGCW Trigger: CCAGCAACCCTCTCTCCCCCAGCCAAGATCTGTCTG...CCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | TGTAACCCTACCCTACCTCCCAGCCTGAGACTCGGTGGGGCCAGCCTGGAAAGTAAGACAGACAGATCTTaGCTGGGGGAGAGAGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: CNPTLPPSLRLGGASLESKTDRS*LGERGL Trigger: CAACCCTCTCTCCCCCAGCCAAGATCTGTCTGTCTT...ACTTTCCAGGCTGGCCCCACCGAGTCTCAGGCTGGGAGGTAGGGTAGGGTTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACTGAGAGCAGCTACAGATGGAGGGAGGTTGCATTCCAGCCTAACAGTGGTATGGCGTCCTCCTGGTaGAGAGACAGGCGACAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTESSYRWREVAFQPNSGMASSW*RDRRQW Trigger: CCACTGTCGCCTGTCTCTCCACCAGGAGGACGCCAT...ACCACTGTTAGGCTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTCAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | CCATCCATGGTCCATGGCATGAAGGCCTGGTGGACCTATCAAAGGCCCGGACACTGGGAAGGAGGCAGCTaGGGAATGAAATGGCGTCCT | + |
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Preference number: 2 (lower is better) Translates to: PSMVHGMKAWWTYQRPGHWEGGS*GMKWRP Trigger: AGGACGCCATTTCATTCCCCAGCTGCCTCCTTCCCA...GTGTCCGGGCCTTTGATAGGTCCACCAGGCCTTCATGCCATGGACCATGGATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | TCGGTGGGGCCAGCCTGGAAAGTTAATGCTATGAAAAGAAACGGGCACAGGGCAGAGCAGAAGAGGAGTTaGGCAGCCCAGGACTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SVGPAWKVNAMKRNGHRAEQKRS*AAQDSP Trigger: GGGAGAGTCCTGGGCTGCTCAACTCCTCTTCTGCTC...TGCCCTGTGCCCGTTTCTTTTCATAGCATTAACTTTCCAGGCTGGCCCCACCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | CCATCCATGGTCCATGGCATGAAGGCCTGGTGGACCTATCAAAGGCCCGGACACGAGGTTTGGAGAAACTaGGCAGAAGAGGAGTTGAGC | + |
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Preference number: 2 (lower is better) Translates to: PSMVHGMKAWWTYQRPGHEVWRN*AEEELS Trigger: GCTCAACTCCTCTTCTGCTCAGTTTCTCCAAACCTC...GTGTCCGGGCCTTTGATAGGTCCACCAGGCCTTCATGCCATGGACCATGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR GCA 90 bp | CGGACACTAAACTCCCTCTGTCTTATCCTCACAACCAGACCTACTTTGGGCAAGGCCCAAGCTAGGCTCTaGCTGGCCCCTTCCTACCCA | + |
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Preference number: 2 (lower is better) Translates to: RTLNSLCLILTTRPTLGKAQARL*LAPSYP Trigger: TGGGTAGGAAGGGGCCAGGCAGAGCCTAGCTTGGGC...CTTGCCCAAAGTAGGTCTGGTTGTGAGGATAAGACAGAGGGAGTTTAGTGTCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | GACTCGGTGGGGCCAGCCTGGAAAGTTAATGCTATGAAAAGAAACGGGCACAGGGGTACAGAGAGGAGCTaGGTCCAGACATACCCTACA | + |
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Preference number: 2 (lower is better) Translates to: DSVGPAWKVNAMKRNGHRGTERS*VQTYPT Trigger: TGTAGGGTATGTCTGGACCCAGCTCCTCTCTGTACC...CCTGTGCCCGTTTCTTTTCATAGCATTAACTTTCCAGGCTGGCCCCACCGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | CCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCCCCATAATCTTAAGGATTaGCATGGCAGAGGATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: PQSLQPEVLASLGTRRCPHNLKD*HGRGCG Trigger: CCCACATCCTCTGCCATGCCAATCCTTAAGATTATG...GGGACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | CGGACACTAAACTCCCTCTGTCTTATCCTCACAACCAGACCTACTTTGGGCAAGAGGTCCTGGCAAGTCTaGGGACTAGAAGGTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RTLNSLCLILTTRPTLGKRSWQV*GLEGVP Trigger: GGGGACACCTTCTAGTCCCCAGACTTGCCAGGACCT...CTTGCCCAAAGTAGGTCTGGTTGTGAGGATAAGACAGAGGGAGTTTAGTGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTTACAGCCAGAGGTCCTaGCAAGTCTGGGGACTAGAA | + |
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Preference number: 2 (lower is better) Translates to: EEELSSPGLSPNSATPFFYSQRS*QVWGLE Trigger: TTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTA...AAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | TGGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAGACAGACAGATCTTGGCTGCTAGACAAAGCTCTGTaGAGGGAAGGGGGTTATAAA | + |
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Preference number: 2 (lower is better) Translates to: WGLEGVPGGTMKTDRSWLLDKAL*REGGYK Trigger: TTTATAACCCCCTTCCCTCCACAGAGCTTTGTCTAG...CAGCCAAGATCTGTCTGTCTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CCA 90 bp | CGGACACTAAACTCCCTCTGTCTTATCCTCACAACCAGACCTACTTTGGGCAAGGAGAGCAGCTACAGATaGAGGGAGGTTGCATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RTLNSLCLILTTRPTLGKESSYR*REVAFQ Trigger: CTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTC...CTTGCCCAAAGTAGGTCTGGTTGTGAGGATAAGACAGAGGGAGTTTAGTGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR TCA 90 bp | TGGAGCATAATCTTAAGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCATGGGTAAAGAGTCCTaGGCCATAGGACCCTTCTAC | + |
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Preference number: 2 (lower is better) Translates to: WSIILRIGMAEDVGARQSMGKES*AIGPFY Trigger: GTAGAAGGGTCCTATGGCTCAGGACTCTTTACCCAT...GCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCTTAAGATTATGCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 72 bp | CAAGGGCCATGCCACAGTCTCTACAGCCAGAGGTCCTaGCAAGTCTGGGGACTAGAAGGTGTCCCCGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: QGPCHSLYSQRS*QVWGLEGVPGG Trigger: GCCACCGGGGACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCATGGCCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 72 bp | TTTGCAAGGTTGTGCATCCGTCACCACCCCCTCCCCTaGCCACCTATACCCAGACCAGACACGAGGTGGCGC | + |
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Preference number: 3 (lower is better) Translates to: FARLCIRHHPLP*PPIPRPDTRWR Trigger: GCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGCCAGGGGAGGGGGTGGTGACGGATGCACAACCTTGCAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 72 bp | CGTCCTCCTGGTGGAGAGACAGGCGACAGTGGGCTCTaGAAAGGCACGGAGGGTGACAGACAGGATTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: RPPGGETGDSGL*KGTEGDRQDSS Trigger: AGAGGAATCCTGTCTGTCACCCTCCGTGCCTTTGCAGAGCCCACTGTCGCCTGTCTCTCCACCAGGAGGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 72 bp | CTCCCCTGGCCACCTATACCCAGACCAGACACGAGGTaGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: LPWPPIPRPDTR*RNGAIKEGQAA Trigger: AGCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGCCAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 72 bp | TGCCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTaGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAG | + |
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Preference number: 3 (lower is better) Translates to: CHSLYSQRSWQV*GLEGVPGGTMK Trigger: CTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR CCA 72 bp | GCCACCTATACCCAGACCAGACACGAGGTGGCGCAATaGAGCTATAAAGGAGGGCCAGGCAGCTCCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ATYTQTRHEVAQ*SYKGGPGSSRR Trigger: CCTTCTGGAGCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CAA 90 bp | GCCACCTATACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCTTAACCCCTCACTGTaGGGAAGGAGGCAGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ATYTQTRHEVAQWSYKGGLNPSL*GRRQLG Trigger: CCCCAGCTGCCTCCTTCCCAACAGTGAGGGGTTAAG...CCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 72 bp | AAAGCTGCCCCTGTAACCCTACCCTACCTCCCAGCCTaGGACTCGGTGGGGCCAGCCTGGAAAGTTAATGCT | + |
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Preference number: 3 (lower is better) Translates to: KAAPVTLPYLPA*DSVGPAWKVNA Trigger: AGCATTAACTTTCCAGGCTGGCCCCACCGAGTCTCAGGCTGGGAGGTAGGGTAGGGTTACAGGGGCAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 72 bp | CTAGTCCGTTTAGAGGGCTGTGGGTTTGCAAGGTTGTaGATCCGTCACCACCCCCTCCCCTGGCCACCTATA | + |
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Preference number: 3 (lower is better) Translates to: LVRLEGCGFARL*IRHHPLPWPPI Trigger: TATAGGTGGCCAGGGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGGACTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 72 bp | CAGGCTCTTAATCTAGCCAAGGCCCAAGCTAGGCTCTaGCTGGCCCCTTCCTACCCACTGAGAGCAGCTACA | + |
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Preference number: 3 (lower is better) Translates to: QALNLAKAQARL*LAPSYPLRAAT Trigger: TGTAGCTGCTCTCAGTGGGTAGGAAGGGGCCAGGCAGAGCCTAGCTTGGGCCTTGGCTAGATTAAGAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 72 bp | GACAGACAGGATTCCTCTCATAGAGAGGCTGGAGCCTaGGGTCAAGGGCCATGCCACAGTCTCTACAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: DRQDSSHREAGA*GQGPCHSLYSQ Trigger: CTGGCTGTAGAGACTGTGGCATGGCCCTTGACCTCAGGCTCCAGCCTCTCTATGAGAGGAATCCTGTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 72 bp | CCTTTCTTTCCTAGTCCGTTTAGAGGGCTGTGGGTTTaGAAGGTTGTGCATCCGTCACCACCCCCTCCCCTG | + |
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Preference number: 3 (lower is better) Translates to: PFFPSPFRGLWV*KVVHPSPPPPL Trigger: CAGGGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGGACTAGGAAAGAAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR GCA 72 bp | TATAGGGACTGTTGTGGCTCAGTCCCTTGGGAAAGCTaGCCCTGTAACCCTACCCTACCTCCCAGCCTGAGA | + |
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Preference number: 3 (lower is better) Translates to: YRDCCGSVPWES*PCNPTLPPSLR Trigger: TCTCAGGCTGGGAGGTAGGGTAGGGTTACAGGGGCAGCTTTCCCAAGGGACTGAGCCACAACAGTCCCTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR-3UTR CAA 90 bp | TCGGTGGGGCCAGCCTGGAAAGTTAATGCTATGAAAAGAAACGGGCACAGGGCAGAAGACAGACAGATCTaGGCTGGGGGAGAGAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: SVGPAWKVNAMKRNGHRAEDRQI*AGGERV Trigger: AACCCTCTCTCCCCCAGCCAAGATCTGTCTGTCTTC...TGCCCTGTGCCCGTTTCTTTTCATAGCATTAACTTTCCAGGCTGGCCCCACCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 72 bp | AGTACGGCTAAGTTCCAGGGTGAGGTTTGGAGAAACTaGGCAGAAGAGGAGTTGAGCAGCCCAGGACTCTCC | + |
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Preference number: 3 (lower is better) Translates to: STAKFQGEVWRN*AEEELSSPGLS Trigger: GGAGAGTCCTGGGCTGCTCAACTCCTCTTCTGCTCAGTTTCTCCAAACCTCACCCTGGAACTTAGCCGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| 3UTR TCA 72 bp | ATAAATAACTGCAGTCTCCATCCATGGTCCATGGCATaGAGGCCTGGTGGACCTATCAAAGGCCCGGACACT | + |
|
Preference number: 3 (lower is better) Translates to: INNCSLHPWSMA*RPGGPIKGPDT Trigger: AGTGTCCGGGCCTTTGATAGGTCCACCAGGCCTTCATGCCATGGACCATGGATGGAGACTGCAGTTATTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCTGTCGGGTTGCCCGGTaGTCCACACGTACCACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTRHEVAQWSYKGGPGSCRVAR*STRTTR Trigger: CCGAGTGGTACGTGTGGAGCACCGGGCAACCCGACA...GCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | CCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCCCTTGCCCCTGAGGATCTaGCGGTATAGCCGGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PQSLQPEVLASLGTRRCPLPLRI*RYSRVR Trigger: CCGCACCCGGCTATACCGGCAGATCCTCAGGGGCAA...GGGACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | CCGTTTAGAGGGCTGTGGGTTTGCAAGGTTGTGCATCCGTCACCACCCCCTCCCCACGGCGTGACTTGTTaGAACGAGTGGAGCGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFRGLWVCKVVHPSPPPPHGVTC*NEWSGW Trigger: CCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTG...GGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAGACAGACAGATCTTGGCTGCCTTCGTGGTGGTTCTaGAGGAGGCGCTGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WGLEGVPGGTMKTDRSWLPSWWF*RRRCVA Trigger: GGCCACACAGCGCCTCCTTCAGAACCACCACGAAGG...CAGCCAAGATCTGTCTGTCTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | ACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCGCCGGTATAGCCGGGTaGGGTTGTCATCCTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTRHEVAQWSYKGGPGSAGIAG*GCHPQR Trigger: CCTTTGAGGATGACAACCGCACCCGGCTATACCGGC...GCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCACTTGTTGGAACGAGTaGAGCGGCTGGAACGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTRHEVAQWSYKGGPGSTCWNE*SGWNAW Trigger: CCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGT...GCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| 3UTR CAA 72 bp | CAGGTAGCAGCACGGAGCTCCCTTAACCCCTCACTGTaGGGAAGGAGGCAGCTGGGGAATGAAATGGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QVAARSSLNPSL*GRRQLGNEMAS Trigger: GGACGCCATTTCATTCCCCAGCTGCCTCCTTCCCAACAGTGAGGGGTTAAGGGAGCTCCGTGCTGCTACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| 3UTR CAA 72 bp | TTCCTAGTCCGTTTAGAGGGCTGTGGGTTTGCAAGGTaGTGCATCCGTCACCACCCCCTCCCCTGGCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLVRLEGCGFAR*CIRHHPLPWPP Trigger: AGGTGGCCAGGGGAGGGGGTGGTGACGGATGCACAACCTTGCAAACCCACAGCCCTCTAAACGGACTAGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAGACAGACAGATCTTGGCTGCTTCTACCAGCTGGATaGTGTTGGCGTGGCGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: WGLEGVPGGTMKTDRSWLLLPAG*CWRGAP Trigger: GGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAG...CAGCCAAGATCTGTCTGTCTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | ACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCTGGACTGGGAAGACTTaGTGCTCTGGCAACGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQTRHEVAQWSYKGGPGSWTGKT*CSGNER Trigger: CCTCTCGTTGCCAGAGCACCAAGTCTTCCCAGTCCA...GCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | GCCACCTATACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGAGCGGCTGGAACGCGTaGACTGGGAAGACTTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: ATYTQTRHEVAQWSYKGGSGWNA*TGKTWC Trigger: GCACCAAGTCTTCCCAGTCCACGCGTTCCAGCCGCT...CCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGTATAGGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAGACAGACAGATCTTGGCTGCTGGGAAGCCAGCTTTaGGAGGGCCAACACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WGLEGVPGGTMKTDRSWLLGSQL*EGQHCP Trigger: TGGACAGTGTTGGCCCTCTCAAAGCTGGCTTCCCAG...CAGCCAAGATCTGTCTGTCTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | ACCCAGACCAGACACGAGGTGGCGCAATGGAGCTATAAAGGAGGGCCAGGCAGCGCAGGATGTAGGCAATaGCACCCAGTGCCCACATAT | + |
|
Preference number: 4 (lower is better) Translates to: TQTRHEVAQWSYKGGPGSAGCRQ*HPVPTY Trigger: ATATGTGGGCACTGGGTGTCATTGCCTACATCCTGC...GCTGCCTGGCCCTCCTTTATAGCTCCATTGCGCCACCTCGTGTCTGGTCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | TGTAACCCTACCCTACCTCCCAGCCTGAGACTCGGTGGGGCCAGCCTGGAAAGTAACTGTATTTGCCCCTaGGGATCTGCCGGTATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CNPTLPPSLRLGGASLESNCICP*GSAGIA Trigger: GGCTATACCGGCAGATCCTCAGGGGCAAATACAGTT...ACTTTCCAGGCTGGCCCCACCGAGTCTCAGGCTGGGAGGTAGGGTAGGGTTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | GACTCGGTGGGGCCAGCCTGGAAAGTTAATGCTATGAAAAGAAACGGGCACAGGTGGATGATGTTGGCGTaGCGCACCCGGCGCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: DSVGPAWKVNAMKRNGHRWMMLA*RTRRST Trigger: AGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCA...CCTGTGCCCGTTTCTTTTCATAGCATTAACTTTCCAGGCTGGCCCCACCGAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGCAGCTACAGATGGAGGGAGGTTGCATTCCAGCCTAACAGTGGTAACGAGTGGAGCGGCTaGAACGCGTGGACTGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTESSYRWREVAFQPNSGNEWSG*NAWTGK Trigger: CTTCCCAGTCCACGCGTTCCAGCCGCTCCACTCGTT...ACCACTGTTAGGCTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTCAGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | CCCACTGAGAGCAGCTACAGATGGAGGGAGGTTGCATTCCAGCCTAACAGTGGTTTTGGCCCTGTACTTTaGCACCCTGGCCCTTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTESSYRWREVAFQPNSGFGPVL*HPGPSW Trigger: CCACGAAGGGCCAGGGTGGCAAAGTACAGGGCCAAA...ACCACTGTTAGGCTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTCAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | CCATCCATGGTCCATGGCATGAAGGCCTGGTGGACCTATCAAAGGCCCGGACACAACACTTCTACCAGCTaGATGATGTTGGCGTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PSMVHGMKAWWTYQRPGHNTSTS*MMLAWR Trigger: GCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTT...GTGTCCGGGCCTTTGATAGGTCCACCAGGCCTTCATGCCATGGACCATGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGCAGCTACAGATGGAGGGAGGTTGCATTCCAGCCTAACAGTGGTCAGGTGTGCCGCACGTaGTCTTCATCAGGCAGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PTESSYRWREVAFQPNSGQVCRT*SSSGSR Trigger: ACGACTGCCTGATGAAGACCACGTGCGGCACACCTG...ACCACTGTTAGGCTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTCAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | TGGGGACTAGAAGGTGTCCCCGGTGGCACCATGAAGACAGACAGATCTTGGCTGGTAATGCCAAGGGCATaGAGATACCGGACACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WGLEGVPGGTMKTDRSWLVMPRA*RYRTPS Trigger: GGATGGTGTCCGGTATCTTCATGCCCTTGGCATTAC...CAGCCAAGATCTGTCTGTCTTCATGGTGCCACCGGGGACACCTTCTAGTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | AGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCTCTGTGGAGGGAAGGACCAGGGCAGGGAGGTaGATACTGACTAGTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIGMAEDVGARQSSVEGRTRAGR*ILTSSW Trigger: CCAGCTACTAGTCAGTATGCACCTCCCTGCCCTGGT...CCTTCCCTCCACAGAGCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | CCCACTGAGAGCAGCTACAGATGGAGGGAGGTTGCATTCCAGCCTAACAGTGGTTGTACTTTGCCACCCTaGCCCTTCGTGGTGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTESSYRWREVAFQPNSGCTLPP*PFVVVL Trigger: CAGAACCACCACGAAGGGCCAGGGTGGCAAAGTACA...ACCACTGTTAGGCTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTCAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | TGCCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCCTCGTGGGTCAAATTTaGCCCTGTACTTTGCCACCC | + |
|
Preference number: 4 (lower is better) Translates to: CHSLYSQRSWQVWGLEGVLVGQI*PCTLPP Trigger: GGGTGGCAAAGTACAGGGCCAAATTTGACCCACGAG...GACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| 3UTR CAA 72 bp | TCCTACCCACTGAGAGCAGCTACAGATGGAGGGAGGTaGCATTCCAGCCTAACAGTGGTAGAGAGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: SYPLRAATDGGR*HSSLTVVESPR Trigger: TCGTGGGCTCTCTACCACTGTTAGGCTGGAATGCAACCTCCCTCCATCTGTAGCTGCTCTCAGTGGGTAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | TGCCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCCAATGTACTCAGGTGTaGCGCACGTGGTCTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CHSLYSQRSWQVWGLEGVQCTQV*RTWSSS Trigger: TGATGAAGACCACGTGCGGCACACCTGAGTACATTG...GACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCCGCTTGAGGAGATTCTaGGAGATGGATCGGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSRLRRF*EMDRCR Trigger: TCTGCACCGATCCATCTCCCAGAATCTCCTCAAGCG...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | TCGGTGGGGCCAGCCTGGAAAGTTAATGCTATGAAAAGAAACGGGCACAGGGCACATCTTGATAGCATATaGCTGTCGGGTTGCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGPAWKVNAMKRNGHRAHLDSI*LSGCPV Trigger: CACCGGGCAACCCGACAGCCATATGCTATCAAGATG...TGCCCTGTGCCCGTTTCTTTTCATAGCATTAACTTTCCAGGCTGGCCCCACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCCAGATTCTTCATGGATaGAGAGGCTGCCATGCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSQILHG*RGCHAY Trigger: GTAAGCATGGCAGCCTCTTCATCCATGAAGAATCTG...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | TCGGTGGGGCCAGCCTGGAAAGTTAATGCTATGAAAAGAAACGGGCACAGGGCAGGCAATGACACCCAGTaGCCACATATCCACGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: SVGPAWKVNAMKRNGHRAGNDTQ*PHIHGI Trigger: AATTCCGTGGATATGTGGGCACTGGGTGTCATTGCC...TGCCCTGTGCCCGTTTCTTTTCATAGCATTAACTTTCCAGGCTGGCCCCACCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCGCTTGGTCCAAGAAAGTGGCAAAAATTAAAGAGATCAGTGGAGACTCAGGGTGTCTTAGGGCCTaGAGTGCAGTCATCCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPAWSKKVAKIKEISGDSGCLRA*SAVIRA Trigger: AGCCCGGATGACTGCACTGCAGGCCCTAAGACACCC...TGAGTCTCCACTGATCTCTTTAATTTTTGCCACTTTCTTGGACCAAGCGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCATAATCTTAAGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCCCAGCTGGACATCCTTaGGTGGCTCAGGAAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: WSIILRIGMAEDVGARQSPAGHP*VAQEGP Trigger: AGGTCCTTCCTGAGCCACCCAAGGATGTCCAGCTGG...GCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCTTAAGATTATGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCATAATCTTAAGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCCTGTGTGGCCAGTATTaGGAACACCAGGGCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSIILRIGMAEDVGARQSLCGQY*EHQGRE Trigger: CTCCCTGCCCTGGTGTTCCCAATACTGGCCACACAG...GCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCTTAAGATTATGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCGGAGATTCTGGGAGATaGATCGGTGCAGATTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSGDSGR*IGADSS Trigger: TGAAGAATCTGCACCGATCCATCTCCCAGAATCTCC...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | CGGACACTAAACTCCCTCTGTCTTATCCTCACAACCAGACCTACTTTGGGCAAGACTGGGAAGACTTGGTaGTCTGGCAACGAGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RTLNSLCLILTTRPTLGKTGKTW*SGNERK Trigger: CTTCCTCTCGTTGCCAGAGCACCAAGTCTTCCCAGT...CTTGCCCAAAGTAGGTCTGGTTGTGAGGATAAGACAGAGGGAGTTTAGTGTCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | CGGACACTAAACTCCCTCTGTCTTATCCTCACAACCAGACCTACTTTGGGCAAGATGAAGAGGCTGCCATaGTTACTACCCATGGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLNSLCLILTTRPTLGKMKRLP*LLPMGV Trigger: GACACCCATGGGTAGTAAGCATGGCAGCCTCTTCAT...CTTGCCCAAAGTAGGTCTGGTTGTGAGGATAAGACAGAGGGAGTTTAGTGTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCATAATCTTAAGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCCTTAGCTGTCACTCGTaGGTCAAATTTGGCCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WSIILRIGMAEDVGARQSLSCHS*VKFGPV Trigger: TACAGGGCCAAATTTGACCCACGAGTGACAGCTAAG...GCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCTTAAGATTATGCTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | AGCCCCGCTTGGTCCAAGAAAGTGGCAAAAATTAAAGAGATCAGTGGAGACTCATGGGAGATGGATCGGTaGAGATTCTTCATGGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPAWSKKVAKIKEISGDSWEMDR*RFFMDE Trigger: TTCATCCATGAAGAATCTGCACCGATCCATCTCCCA...TGAGTCTCCACTGATCTCTTTAATTTTTGCCACTTTCTTGGACCAAGCGGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR GCA 90 bp | TGGAGCATAATCTTAAGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCACCTCTGTGATGAAGTaGTTGTATACATCATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WSIILRIGMAEDVGARQSTSVMK*LYTSFL Trigger: TAAGAATGATGTATACAAGCACTTCATCACAGAGGT...GCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCTTAAGATTATGCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS TCA 90 bp | ATAGCGCAGGTTAAGCTCCCGCAGTTCGCGCTCCCGAACACGGCGTaGCTTGTTGGAACGAGTGGAGCGGCTGGAACGCGTGGACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IAQVKLPQFALPNTA*LVGTSGAAGTRGLG Trigger: TCCCAGTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGAGCTTAACCTGCGCTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCACCAGCTGGATGATGTaGGCGTGGCGCACCCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSTSWMM*AWRTRR Trigger: GCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGT...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS GCA 90 bp | AGGAGGCGCTGTGTGGCCAGTATTGGGAACACCAGGGCAGGGAGGTaGATACTGACTAGTAGCTGGGAAGCCAGCTTTGAGAGGGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RRRCVASIGNTRAGR*ILTSSWEASFERAN Trigger: GTTGGCCCTCTCAAAGCTGGCTTCCCAGCTACTAGTCAGTATGCACCTCCCTGCCCTGGTGTTCCCAATACTGGCCACACAGCGCCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS TCA 90 bp | GCTGTGTGGCCAGTATTGGGAACACCAGGGCAGGGAGGTGCATACTaGCTAGTAGCTGGGAAGCCAGCTTTGAGAGGGCCAACACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVWPVLGTPGQGGAY*LVAGKPALRGPTLS Trigger: GGACAGTGTTGGCCCTCTCAAAGCTGGCTTCCCAGCTACTAGTCAGTATGCACCTCCCTGCCCTGGTGTTCCCAATACTGGCCACACAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS TCA 90 bp | CCATATATACACGCTCCTGTGTCTCAAACACTTCTACCAGCTGGATaGTGTTGGCGTGGCGCACCCGGCGCAGCACTCGGAGCTCGGACT | + |
|
Preference number: 5 (lower is better) Translates to: PYIHAPVSQTLLPAG*CWRGAPGAALGART Trigger: AGTCCGAGCTCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGACACAGGAGCGTGTATATATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CAA 90 bp | AGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCTCTGTGGAGGGAAGGTCCAGCTGGACATCCTaGGGTGGCTCAGGAAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: RIGMAEDVGARQSSVEGRSSWTS*GGSGRT Trigger: GGTCCTTCCTGAGCCACCCAAGGATGTCCAGCTGGA...CCTTCCCTCCACAGAGCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CAA 90 bp | AGGATTGGCATGGCAGAGGATGTGGGAGCTAGACAAAGCTCTGTGGAGGGAAGGCATATGGCTGTCGGGTaGCCCGGTGCTCCACACGTA | + |
|
Preference number: 5 (lower is better) Translates to: RIGMAEDVGARQSSVEGRHMAVG*PGAPHV Trigger: TACGTGTGGAGCACCGGGCAACCCGACAGCCATATG...CCTTCCCTCCACAGAGCTTTGTCTAGCTCCCACATCCTCTGCCATGCCAATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCCGAACACGGCGTGACTaGTTGGAACGAGTGGAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSRTRRD*LERVER Trigger: CCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCG...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS GCA 90 bp | TCGGTACTTGGTCTCTATCATCTTGATAGCATATGGCTGTCGGGTTaGCCGGTGCTCCACACGTACCACTCGGCTAAAGCTGCCTCGCCC | + |
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Preference number: 5 (lower is better) Translates to: SVLGLYHLDSIWLSG*PVLHTYHSAKAASP Trigger: GGGCGAGGCAGCTTTAGCCGAGTGGTACGTGTGGAGCACCGGGCAACCCGACAGCCATATGCTATCAAGATGATAGAGACCAAGTACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 90 bp | ATCACCATATATACACGCTCCTGTGTCTCAAACACTTCTACCAGCTaGATGATGTTGGCGTGGCGCACCCGGCGCAGCACTCGGAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ITIYTRSCVSNTSTS*MMLAWRTRRSTRSS Trigger: CGAGCTCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGACACAGGAGCGTGTATATATGGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCTATAGCCGGGTGCGGTaGTCATCCTCAAAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSYSRVR*SSSKGM Trigger: CATGCCCTTTGAGGATGACAACCGCACCCGGCTATA...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS GCA 90 bp | TTGGTCTCTATCATCTTGATAGCATATGGCTGTCGGGTTGCCCGGTaGTCCACACGTACCACTCGGCTAAAGCTGCCTCGCCCAATTAGG | + |
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Preference number: 5 (lower is better) Translates to: LVSIILIAYGCRVAR*STRTTRLKLPRPIR Trigger: CCTAATTGGGCGAGGCAGCTTTAGCCGAGTGGTACGTGTGGAGCACCGGGCAACCCGACAGCCATATGCTATCAAGATGATAGAGACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 90 bp | AGTATTGGGAACACCAGGGCAGGGAGGTGCATACTGACTAGTAGCTaGGAAGCCAGCTTTGAGAGGGCCAACACTGTCCACCTCTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: SIGNTRAGRCILTSS*EASFERANTVHLCD Trigger: ATCACAGAGGTGGACAGTGTTGGCCCTCTCAAAGCTGGCTTCCCAGCTACTAGTCAGTATGCACCTCCCTGCCCTGGTGTTCCCAATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | CCATCCATGGTCCATGGCATGAAGGCCTGGTGGACCTATCAAAGGCCCGGACACCGCCCTTCTCGGTACTaGGTCTCTATCATCTTGATA | + |
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Preference number: 5 (lower is better) Translates to: PSMVHGMKAWWTYQRPGHRPSRY*VSIILI Trigger: TATCAAGATGATAGAGACCAAGTACCGAGAAGGGCG...GTGTCCGGGCCTTTGATAGGTCCACCAGGCCTTCATGCCATGGACCATGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | CCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCCCCGGTCAATGAAGTCCTaGGCCAGATTAGATACACTA | + |
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Preference number: 5 (lower is better) Translates to: PQSLQPEVLASLGTRRCPRSMKS*ARLDTL Trigger: TAGTGTATCTAATCTGGCCAAGGACTTCATTGACCG...GGGACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | TGCCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCTTGGTCTCTATCATCTaGATAGCATATGGCTGTCGG | + |
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Preference number: 5 (lower is better) Translates to: CHSLYSQRSWQVWGLEGVLVSII*IAYGCR Trigger: CCGACAGCCATATGCTATCAAGATGATAGAGACCAA...GACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | AGAGGAGTTGAGCAGCCCAGGACTCTCCCCCAATTCAGCAACGCCTTTCTTTCCACCATCCAGTACCATTaGAAGCACTCTTGTGGCATC | + |
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Preference number: 5 (lower is better) Translates to: RGVEQPRTLPQFSNAFLSTIQYH*KHSCGI Trigger: GATGCCACAAGAGTGCTTCAAATGGTACTGGATGGT...GGAAAGAAAGGCGTTGCTGAATTGGGGGAGAGTCCTGGGCTGCTCAACTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCGCTTGGTCCAAGAAAGTGGCAAAAATTAAAGAGATCAGTGGAGACTCAACACGGCGTGACTTGTaGGAACGAGTGGAGCGGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPAWSKKVAKIKEISGDSTRRDL*ERVERL Trigger: CAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGT...TGAGTCTCCACTGATCTCTTTAATTTTTGCCACTTTCTTGGACCAAGCGGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | TGCCACAGTCTCTACAGCCAGAGGTCCTGGCAAGTCTGGGGACTAGAAGGTGTCTCTGTGATGAAGTGCTaGTATACATCATTCTTAGTG | + |
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Preference number: 5 (lower is better) Translates to: CHSLYSQRSWQVWGLEGVSVMKC*YTSFLV Trigger: CACTAAGAATGATGTATACAAGCACTTCATCACAGA...GACACCTTCTAGTCCCCAGACTTGCCAGGACCTCTGGCTGTAGAGACTGTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS-3UTR CAA 90 bp | AGCCCCGCTTGGTCCAAGAAAGTGGCAAAAATTAAAGAGATCAGTGGAGACTCAACTCGTGGGTCAAATTaGGCCCTGTACTTTGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SPAWSKKVAKIKEISGDSTRGSN*ALYFAT Trigger: GGTGGCAAAGTACAGGGCCAAATTTGACCCACGAGT...TGAGTCTCCACTGATCTCTTTAATTTTTGCCACTTTCTTGGACCAAGCGGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 72 bp | CCCGCAGTTCGCGCTCCCGAACACGGCGTGACTTGTTaGAACGAGTGGAGCGGCTGGAACGCGTGGACTGGG | + |
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Preference number: 6 (lower is better) Translates to: PAVRAPEHGVTC*NEWSGWNAWTG Trigger: CCCAGTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 72 bp | TCCCGCAGTTCGCGCTCCCGAACACGGCGTGACTTGTaGGAACGAGTGGAGCGGCTGGAACGCGTGGACTGG | + |
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Preference number: 6 (lower is better) Translates to: SRSSRSRTRRDL*ERVERLERVDW Trigger: CCAGTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 72 bp | AGCTCCCGCAGTTCGCGCTCCCGAACACGGCGTGACTaGTTGGAACGAGTGGAGCGGCTGGAACGCGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: SSRSSRSRTRRD*LERVERLERVD Trigger: GTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 72 bp | CGCGCTCCCGAACACGGCGTGACTTGTTGGAACGAGTaGAGCGGCTGGAACGCGTGGACTGGGAAGACTTGG | + |
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Preference number: 6 (lower is better) Translates to: RAPEHGVTCWNE*SGWNAWTGKTW Trigger: CCAAGTCTTCCCAGTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 90 bp | CGCAGGTTAAGCTCCCGCAGTTCGCGCTCCCGAACACGGCGTGACTaGTTGGAACGAGTGGAGCGGCTGGAACGCGTGGACTGGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RRLSSRSSRSRTRRD*LERVERLERVDWED Trigger: GTCTTCCCAGTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGAGCTTAACCTGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS TCA 72 bp | GTTAAGCTCCCGCAGTTCGCGCTCCCGAACACGGCGTaGCTTGTTGGAACGAGTGGAGCGGCTGGAACGCGT | + |
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Preference number: 6 (lower is better) Translates to: VKLPQFALPNTA*LVGTSGAAGTR Trigger: ACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGAGCTTAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 72 bp | CTGGCCCTTCGTGGTGGTTCTGAAGGAGGCGCTGTGTaGCCAGTATTGGGAACACCAGGGCAGGGAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LALRGGSEGGAV*PVLGTPGQGGA Trigger: TGCACCTCCCTGCCCTGGTGTTCCCAATACTGGCCACACAGCGCCTCCTTCAGAACCACCACGAAGGGCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 72 bp | TTGCCCCTGAGGATCTGCCGGTATAGCCGGGTGCGGTaGTCATCCTCAAAGGGCATGGTGCCGCTGAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: LPLRICRYSRVR*SSSKGMVPLSR Trigger: CCTGCTCAGCGGCACCATGCCCTTTGAGGATGACAACCGCACCCGGCTATACCGGCAGATCCTCAGGGGCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 90 bp | AGGTTAAGCTCCCGCAGTTCGCGCTCCCGAACACGGCGTGACTTGTaGGAACGAGTGGAGCGGCTGGAACGCGTGGACTGGGAAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: RLSSRSSRSRTRRDL*ERVERLERVDWEDL Trigger: CAAGTCTTCCCAGTCCACGCGTTCCAGCCGCTCCACTCGTTCCAACAAGTCACGCCGTGTTCGGGAGCGCGAACTGCGGGAGCTTAACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS TCA 72 bp | CACGCTCCTGTGTCTCAAACACTTCTACCAGCTGGATaGTGTTGGCGTGGCGCACCCGGCGCAGCACTCGGA | + |
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Preference number: 6 (lower is better) Translates to: HAPVSQTLLPAG*CWRGAPGAALG Trigger: TCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGACACAGGAGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 72 bp | GTCTCAAACACTTCTACCAGCTGGATGATGTTGGCGTaGCGCACCCGGCGCAGCACTCGGAGCTCGGACTCA | + |
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Preference number: 6 (lower is better) Translates to: VSNTSTSWMMLA*RTRRSTRSSDS Trigger: TGAGTCCGAGCTCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 72 bp | TCCTGTGTCTCAAACACTTCTACCAGCTGGATGATGTaGGCGTGGCGCACCCGGCGCAGCACTCGGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SCVSNTSTSWMM*AWRTRRSTRSS Trigger: CGAGCTCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGACACAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 72 bp | CCAGGGTCCACGGTCAGCAGGCGGTCAATGAAGTCCTaGGCCAGATTAGATACACTAGGCCAGGGCTCCCCC | + |
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Preference number: 6 (lower is better) Translates to: PGSTVSRRSMKS*ARLDTLGQGSP Trigger: GGGGGAGCCCTGGCCTAGTGTATCTAATCTGGCCAAGGACTTCATTGACCGCCTGCTGACCGTGGACCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 90 bp | TATACACGCTCCTGTGTCTCAAACACTTCTACCAGCTGGATGATGTaGGCGTGGCGCACCCGGCGCAGCACTCGGAGCTCGGACTCACAC | + |
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Preference number: 6 (lower is better) Translates to: YTRSCVSNTSTSWMM*AWRTRRSTRSSDSH Trigger: GTGTGAGTCCGAGCTCCGAGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGACACAGGAGCGTGTATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 90 bp | AGCACTCGGAGCTCGGACTCACACACCTCCCGCCCTTCTCGGTACTaGGTCTCTATCATCTTGATAGCATATGGCTGTCGGGTTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: STRSSDSHTSRPSRY*VSIILIAYGCRVAR Trigger: CCGGGCAACCCGACAGCCATATGCTATCAAGATGATAGAGACCAAGTACCGAGAAGGGCGGGAGGTGTGTGAGTCCGAGCTCCGAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS GCA 72 bp | ATCATCTTGATAGCATATGGCTGTCGGGTTGCCCGGTaGTCCACACGTACCACTCGGCTAAAGCTGCCTCGC | + |
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Preference number: 6 (lower is better) Translates to: IILIAYGCRVAR*STRTTRLKLPR Trigger: GCGAGGCAGCTTTAGCCGAGTGGTACGTGTGGAGCACCGGGCAACCCGACAGCCATATGCTATCAAGATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 72 bp | AACACCAGGGCAGGGAGGTGCATACTGACTAGTAGCTaGGAAGCCAGCTTTGAGAGGGCCAACACTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: NTRAGRCILTSS*EASFERANTVH Trigger: GTGGACAGTGTTGGCCCTCTCAAAGCTGGCTTCCCAGCTACTAGTCAGTATGCACCTCCCTGCCCTGGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CCA 72 bp | TATACACGCTCCTGTGTCTCAAACACTTCTACCAGCTaGATGATGTTGGCGTGGCGCACCCGGCGCAGCACT | + |
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Preference number: 6 (lower is better) Translates to: YTRSCVSNTSTS*MMLAWRTRRST Trigger: AGTGCTGCGCCGGGTGCGCCACGCCAACATCATCCAGCTGGTAGAAGTGTTTGAGACACAGGAGCGTGTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS GCA 72 bp | GGTCTCTATCATCTTGATAGCATATGGCTGTCGGGTTaGCCGGTGCTCCACACGTACCACTCGGCTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: GLYHLDSIWLSG*PVLHTYHSAKA Trigger: AGCTTTAGCCGAGTGGTACGTGTGGAGCACCGGGCAACCCGACAGCCATATGCTATCAAGATGATAGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 72 bp | AGCTCGGACTCACACACCTCCCGCCCTTCTCGGTACTaGGTCTCTATCATCTTGATAGCATATGGCTGTCGG | + |
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Preference number: 6 (lower is better) Translates to: SSDSHTSRPSRY*VSIILIAYGCR Trigger: CCGACAGCCATATGCTATCAAGATGATAGAGACCAAGTACCGAGAAGGGCGGGAGGTGTGTGAGTCCGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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| CDS CAA 90 bp | TGTAATGCCAAGGGCATGAAGATACCGGACACCATCCAGTACCATTaGAAGCACTCTTGTGGCATCTCGTTCAGTGAAAGAACCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: CNAKGMKIPDTIQYH*KHSCGISFSERTLG Trigger: GCCAAGGGTTCTTTCACTGAACGAGATGCCACAAGAGTGCTTCAAATGGTACTGGATGGTGTCCGGTATCTTCATGCCCTTGGCATTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049699.9 |
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