Pregenerated sensors for PSG28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030373Ensembl transcript IDs: ENSMUST00000019291.7
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR GCA 90 bp | TATGGGGGTAGGTATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCGTTAGGAGAACCCTCTaGCAGGAGGTACACCCGTTG | + |
Preference number: 4 (lower is better) Translates to: YGGRYGHLNTEMPPPSYSVRRTL*QEVHPL Trigger: CAACGGGTGTACCTCCTGGCAGAGGGTTCTCCTAAC...GCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATACCTACCCCCATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR TCA 90 bp | GTATGGTACAGAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCAGGACCAGGTTCCCTTaGTTTCTTGGCTCTTCTGTA | + |
Preference number: 4 (lower is better) Translates to: VWYRMKAFLRGKLIALSARTRFP*FLGSSV Trigger: TACAGAAGAGCCAAGAAATCAAGGGAACCTGGTCCT...GGCACTCAGAGCTATGAGTTTTCCTCTTAGAAATGCTTTCATTCTGTACCATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR GCA 90 bp | CAAACTCAGGGCCAAAATCAACCTACTGGAAACAAAAAGAAGGGTAGAATAGCCTACCAGGAAAAGGTTTaGAGACCTTCTGGCAGATTA | + |
Preference number: 4 (lower is better) Translates to: QTQGQNQPTGNKKKGRIAYQEKV*RPSGRL Trigger: TAATCTGCCAGAAGGTCTGCAAACCTTTTCCTGGTA...GGCTATTCTACCCTTCTTTTTGTTTCCAGTAGGTTGATTTTGGCCCTGAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CCA 90 bp | ATAGCTCTGAGTGCCTCCAAAAAGAAACTAGAGAGTACATATACTAGTAGCTGGTCTCCTTCAACCACTTaGGGTGGAAAGGATTCAATG | + |
Preference number: 4 (lower is better) Translates to: IALSASKKKLESTYTSSWSPSTT*GGKDSM Trigger: CATTGAATCCTTTCCACCCCAAGTGGTTGAAGGAGA...CCAGCTACTAGTATATGTACTCTCTAGTTTCTTTTTGGAGGCACTCAGAGCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CCA 90 bp | AATCAAACTCAGGGCCAAAATCAACCTACTGGAAACAAAAAGAAGGGTAGAATATCCTGTGTGACATTTTaGATCCACAGGGACCCGTTG | + |
Preference number: 4 (lower is better) Translates to: NQTQGQNQPTGNKKKGRISCVTF*IHRDPL Trigger: CAACGGGTCCCTGTGGATCCAAAATGTCACACAGGA...TATTCTACCCTTCTTTTTGTTTCCAGTAGGTTGATTTTGGCCCTGAGTTTGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CCA 90 bp | CAGGATATAATCAAACTCAGGGCCAAAATCAACCTACTGGAAACAAAAAGAAGGTTCAACCACTTGGGGTaGAAAGGATTCAATGGTGAC | + |
Preference number: 4 (lower is better) Translates to: QDIIKLRAKINLLETKRRFNHLG*KGFNGD Trigger: GTCACCATTGAATCCTTTCCACCCCAAGTGGTTGAA...CCTTCTTTTTGTTTCCAGTAGGTTGATTTTGGCCCTGAGTTTGATTATATCCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CCA 90 bp | AAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCTCCAAAAAGAAACTAGGTTTGCAGACCTTCTaGCAGATTATAGACCTGGAG | + |
Preference number: 4 (lower is better) Translates to: KAFLRGKLIALSASKKKLGLQTF*QIIDLE Trigger: CTCCAGGTCTATAATCTGCCAGAAGGTCTGCAAACC...TAGTTTCTTTTTGGAGGCACTCAGAGCTATGAGTTTTCCTCTTAGAAATGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR GCA 90 bp | CAGGATATAATCAAACTCAGGGCCAAAATCAACCTACTGGAAACAAAAAGAAGGGTTGACTTGGACGTGTaGTGTTACAACTCTCATATT | + |
Preference number: 4 (lower is better) Translates to: QDIIKLRAKINLLETKRRVDLDV*CYNSHI Trigger: AATATGAGAGTTGTAACAGCACACGTCCAAGTCAAC...CCTTCTTTTTGTTTCCAGTAGGTTGATTTTGGCCCTGAGTTTGATTATATCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 90 bp | GAACACTTCCCCCTTCAGCAGCGTGCTGTGGCACTGGATCAATGCTaGGTTGGGCAGAGTCAAGAGTGTCACAGCACAAGGAAAGGGAGG | + |
Preference number: 5 (lower is better) Translates to: EHFPLQQRAVALDQC*VGQSQECHSTRKGR Trigger: CCTCCCTTTCCTTGTGCTGTGACACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGGAAGTGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | TATGGGGGTAGGTATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCCTCCTGTGTGACATTTaGGATCCACAGGGACCCGTT | + |
Preference number: 5 (lower is better) Translates to: YGGRYGHLNTEMPPPSYSLLCDI*DPQGPV Trigger: AACGGGTCCCTGTGGATCCAAAATGTCACACAGGAG...GCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATACCTACCCCCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS GCA 90 bp | GAGCAGCAGGGATCCATTGGTGTACCCTATCTCTCTTCTGCTGTGTaGACGGCCTCTGATGATGGACTTCGTTGCTATGCTATATTCTGC | + |
Preference number: 5 (lower is better) Translates to: EQQGSIGVPYLSSAV*TASDDGLRCYAIFC Trigger: GCAGAATATAGCATAGCAACGAAGTCCATCATCAGAGGCCGTGCACACAGCAGAAGAGAGATAGGGTACACCAATGGATCCCTGCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 90 bp | TCCAGCATCCTCCTTCCTCACAGTATGTATCCTGAGTTGGCATTTTaGTGGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTGATT | + |
Preference number: 5 (lower is better) Translates to: SSILLPHSMYPELAF*WGQGHPLCELQILI Trigger: AATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 90 bp | CATTTTGATGGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTaGTTGTTGAAGAGCCAACGGATGGAGATTCCAGTGTTGTATGAG | + |
Preference number: 5 (lower is better) Translates to: HFDGDRVILSVSCRF*LLKSQRMEIPVLYE Trigger: CTCATACAACACTGGAATCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CCA 90 bp | ATTGTTACTAGTGTGTACAATCCAGAGTCTTTCTCAGTGACATCCTaGAGCAGCAGGGATCCATTGGTGTACCCTATCTCTCTTCTGCTG | + |
Preference number: 5 (lower is better) Translates to: IVTSVYNPESFSVTS*SSRDPLVYPISLLL Trigger: CAGCAGAAGAGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAAAGACTCTGGATTGTACACACTAGTAACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS GCA 90 bp | GTGTGCACGGCCTCTGATGATGGACTTCGTTGCTATGCTATATTCTaGAATTTTAAAGTCCTGAGTGCTAAGCACACCTTTGTACCAGGA | + |
Preference number: 5 (lower is better) Translates to: VCTASDDGLRCYAIF*NFKVLSAKHTFVPG Trigger: TCCTGGTACAAAGGTGTGCTTAGCACTCAGGACTTTAAAATTGCAGAATATAGCATAGCAACGAAGTCCATCATCAGAGGCCGTGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | CAAACTCAGGGCCAAAATCAACCTACTGGAAACAAAAAGAAGGGTAGAATAGCCGGTTCCCTTGATTTCTaGGCTCTTCTGTATCGAGCA | + |
Preference number: 5 (lower is better) Translates to: QTQGQNQPTGNKKKGRIAGSLDF*ALLYRA Trigger: TGCTCGATACAGAAGAGCCAAGAAATCAAGGGAACC...GGCTATTCTACCCTTCTTTTTGTTTCCAGTAGGTTGATTTTGGCCCTGAGTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | GTATGGTACAGAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCTGGATCAATGCTGAGTaGGGCAGAGTCAAGAGTGTC | + |
Preference number: 5 (lower is better) Translates to: VWYRMKAFLRGKLIALSAWINAE*GRVKSV Trigger: GACACTCTTGACTCTGCCCAACTCAGCATTGATCCA...GGCACTCAGAGCTATGAGTTTTCCTCTTAGAAATGCTTTCATTCTGTACCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | CCCAAAGTATGGTACAGAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCTGCAGGACCAGGTTCCCTaGATTTCTTGGCTCTTCTGT | + |
Preference number: 5 (lower is better) Translates to: PKVWYRMKAFLRGKLIALQDQVP*ISWLFC Trigger: ACAGAAGAGCCAAGAAATCAAGGGAACCTGGTCCTG...CAGAGCTATGAGTTTTCCTCTTAGAAATGCTTTCATTCTGTACCATACTTTGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | AAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCTCCAAAAAGAAACTAGTGCTAAGCACACCTTaGTACCAGGAAAAGGTTTGC | + |
Preference number: 5 (lower is better) Translates to: KAFLRGKLIALSASKKKLVLSTP*YQEKVC Trigger: GCAAACCTTTTCCTGGTACAAAGGTGTGCTTAGCAC...TAGTTTCTTTTTGGAGGCACTCAGAGCTATGAGTTTTCCTCTTAGAAATGCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | GTATGGTACAGAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCATGGAGATTCCAGTGTaGTATGAGAAGCAAGTGAAG | + |
Preference number: 5 (lower is better) Translates to: VWYRMKAFLRGKLIALSAMEIPV*YEKQVK Trigger: CTTCACTTGCTTCTCATACAACACTGGAATCTCCAT...GGCACTCAGAGCTATGAGTTTTCCTCTTAGAAATGCTTTCATTCTGTACCATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | CAGGATATAATCAAACTCAGGGCCAAAATCAACCTACTGGAAACAAAAAGAAGGCGAGCAATCTCAACCTaGTTAAATACAATCAGCCCT | + |
Preference number: 5 (lower is better) Translates to: QDIIKLRAKINLLETKRRRAIST*LNTISP Trigger: AGGGCTGATTGTATTTAACAAGGTTGAGATTGCTCG...CCTTCTTTTTGTTTCCAGTAGGTTGATTTTGGCCCTGAGTTTGATTATATCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS-3UTR CAA 90 bp | CAGAATGAAAGCATTTCTAAGAGGAAAACTCATAGCTCTGAGTGCCTCCAAAAAAGTACAGGGATGTATTaGATACCATTTCTCCTTGTT | + |
Preference number: 5 (lower is better) Translates to: QNESISKRKTHSSECLQKSTGMY*IPFLLV Trigger: AACAAGGAGAAATGGTATCAAATACATCCCTGTACT...TTTTTGGAGGCACTCAGAGCTATGAGTTTTCCTCTTAGAAATGCTTTCATTCTG 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 90 bp | ACAGATGAAAAGAGAGGAGTACACGTGCAAGTACAGGGATGTATTTaGTACCATTTCTCCTTGTTTACTTATGGTTTGAAAGGTGTAATA | + |
Preference number: 5 (lower is better) Translates to: TDEKRGVHVQVQGCI*YHFSLFTYGLKGVI Trigger: TATTACACCTTTCAAACCATAAGTAAACAAGGAGAAATGGTATCAAATACATCCCTGTACTTGCACGTGTACTCCTCTCTTTTCATCTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CCA 72 bp | CTGGAGAAGAACACTTCCCCCTTCAGCAGCGTGCTGTaGCACTGGATCAATGCTGAGTTGGGCAGAGTCAAG | + |
Preference number: 6 (lower is better) Translates to: LEKNTSPFSSVL*HWINAELGRVK Trigger: CTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGGAAGTGTTCTTCTCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CCA 72 bp | TCAGCAGCGTGCTGTGGCACTGGATCAATGCTGAGTTaGGCAGAGTCAAGAGTGTCACAGCACAAGGAAAGG | + |
Preference number: 6 (lower is better) Translates to: SAACCGTGSMLS*AESRVSQHKER Trigger: CCTTTCCTTGTGCTGTGACACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CCA 72 bp | AAGAACACTTCCCCCTTCAGCAGCGTGCTGTGGCACTaGATCAATGCTGAGTTGGGCAGAGTCAAGAGTGTC | + |
Preference number: 6 (lower is better) Translates to: KNTSPFSSVLWH*INAELGRVKSV Trigger: GACACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGGAAGTGTTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 72 bp | GGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTaGTTGTTGAAGAGCCAACGGATGGAGATTCCAGTG | + |
Preference number: 6 (lower is better) Translates to: GDRVILSVSCRF*LLKSQRMEIPV Trigger: CACTGGAATCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | TTCAGCAGCGTGCTGTGGCACTGGATCAATGCTGAGTaGGGCAGAGTCAAGAGTGTCACAGCACAAGGAAAG | + |
Preference number: 6 (lower is better) Translates to: FSSVLWHWINAE*GRVKSVTAQGK Trigger: CTTTCCTTGTGCTGTGACACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | TCTTTCTCAGTGACATCCTGGAGCAGCAGGGATCCATaGGTGTACCCTATCTCTCTTCTGCTGTGTGCACGG | + |
Preference number: 6 (lower is better) Translates to: SFSVTSWSSRDP*VYPISLLLCAR Trigger: CCGTGCACACAGCAGAAGAGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 90 bp | TATCCTGTGTCCTCCTGTGTGACATTTTGGATCCACAGGGACCCGTaGATGTATAATGTCTCTCTGCCGCTGTGCTTCAGCCCCTTCGCT | + |
Preference number: 6 (lower is better) Translates to: YPVSSCVTFWIHRDP*MYNVSLPLCFSPFA Trigger: AGCGAAGGGGCTGAAGCACAGCGGCAGAGAGACATTATACATCAACGGGTCCCTGTGGATCCAAAATGTCACACAGGAGGACACAGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 90 bp | AATCCAGAGTCTTTCTCAGTGACATCCTGGAGCAGCAGGGATCCATaGGTGTACCCTATCTCTCTTCTGCTGTGTGCACGGCCTCTGATG | + |
Preference number: 6 (lower is better) Translates to: NPESFSVTSWSSRDP*VYPISLLLCARPLM Trigger: CATCAGAGGCCGTGCACACAGCAGAAGAGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAAAGACTCTGGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | TCCTCCTGTGTGACATTTTGGATCCACAGGGACCCGTaGATGTATAATGTCTCTCTGCCGCTGTGCTTCAGC | + |
Preference number: 6 (lower is better) Translates to: SSCVTFWIHRDP*MYNVSLPLCFS Trigger: GCTGAAGCACAGCGGCAGAGAGACATTATACATCAACGGGTCCCTGTGGATCCAAAATGTCACACAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | CTGTCCGTGACTCTCATGGCAGGCTGTGTCACAAGCTaGTGGATGTTGACTTGGACGTGTGCTGTTACAACT | + |
Preference number: 6 (lower is better) Translates to: LSVTLMAGCVTS*WMLTWTCAVTT Trigger: AGTTGTAACAGCACACGTCCAAGTCAACATCCACAAGCTTGTGACACAGCCTGCCATGAGAGTCACGGACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 72 bp | TGTCTCTCTACCACTGTGGGCAGGACCAGGTTCCCTTaGTTTCTTGGCTCTTCTGTATCGAGCAATCTCAAC | + |
Preference number: 6 (lower is better) Translates to: CLSTTVGRTRFP*FLGSSVSSNLN Trigger: GTTGAGATTGCTCGATACAGAAGAGCCAAGAAATCAAGGGAACCTGGTCCTGCCCACAGTGGTAGAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | CTGTCTCTCTACCACTGTGGGCAGGACCAGGTTCCCTaGATTTCTTGGCTCTTCTGTATCGAGCAATCTCAA | + |
Preference number: 6 (lower is better) Translates to: LSLYHCGQDQVP*ISWLFCIEQSQ Trigger: TTGAGATTGCTCGATACAGAAGAGCCAAGAAATCAAGGGAACCTGGTCCTGCCCACAGTGGTAGAGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CCA 72 bp | AGTGTGTACAATCCAGAGTCTTTCTCAGTGACATCCTaGAGCAGCAGGGATCCATTGGTGTACCCTATCTCT | + |
Preference number: 6 (lower is better) Translates to: SVYNPESFSVTS*SSRDPLVYPIS Trigger: AGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAAAGACTCTGGATTGTACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | CTACCACTGTGGGCAGGACCAGGTTCCCTTGATTTCTaGGCTCTTCTGTATCGAGCAATCTCAACCTTGTTA | + |
Preference number: 6 (lower is better) Translates to: LPLWAGPGSLDF*ALLYRAISTLL Trigger: TAACAAGGTTGAGATTGCTCGATACAGAAGAGCCAAGAAATCAAGGGAACCTGGTCCTGCCCACAGTGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 90 bp | ACTGTCTCTCTACCACTGTGGGCAGGACCAGGTTCCCTTGATTTCTaGGCTCTTCTGTATCGAGCAATCTCAACCTTGTTAAATACAATC | + |
Preference number: 6 (lower is better) Translates to: TVSLPLWAGPGSLDF*ALLYRAISTLLNTI Trigger: GATTGTATTTAACAAGGTTGAGATTGCTCGATACAGAAGAGCCAAGAAATCAAGGGAACCTGGTCCTGCCCACAGTGGTAGAGAGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 90 bp | CGCTGTGCTTCAGCCCCTTCGCTGTTAAACTATAGTACAGTGCAATaGCATGTCTCAAATTTGTCATTCCTCTGTACCAGCCAAACACTA | + |
Preference number: 6 (lower is better) Translates to: RCASAPSLLNYSTVQ*HVSNLSFLCTSQTL Trigger: TAGTGTTTGGCTGGTACAGAGGAATGACAAATTTGAGACATGCAATTGCACTGTACTATAGTTTAACAGCGAAGGGGCTGAAGCACAGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS GCA 72 bp | GTAGATCGCCCACAGATGAAAAGAGAGGAGTACACGTaGAAGTACAGGGATGTATTTGATACCATTTCTCCT | + |
Preference number: 6 (lower is better) Translates to: VDRPQMKREEYT*KYRDVFDTISP Trigger: AGGAGAAATGGTATCAAATACATCCCTGTACTTGCACGTGTACTCCTCTCTTTTCATCTGTGGGCGATCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS GCA 72 bp | CTGTGTCACAAGCTTGTGGATGTTGACTTGGACGTGTaGTGTTACAACTCTCATATTGCTGTCTATTGTTAC | + |
Preference number: 6 (lower is better) Translates to: LCHKLVDVDLDV*CYNSHIAVYCY Trigger: GTAACAATAGACAGCAATATGAGAGTTGTAACAGCACACGTCCAAGTCAACATCCACAAGCTTGTGACACAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | TCAGCCCCTTCGCTGTTAAACTATAGTACAGTGCAATaGCATGTCTCAAATTTGTCATTCCTCTGTACCAGC | + |
Preference number: 6 (lower is better) Translates to: SAPSLLNYSTVQ*HVSNLSFLCTS Trigger: GCTGGTACAGAGGAATGACAAATTTGAGACATGCAATTGCACTGTACTATAGTTTAACAGCGAAGGGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS TCA 72 bp | TTCGTTGCTATGCTATATTCTGCAATTTTAAAGTCCTaGGTGCTAAGCACACCTTTGTACCAGGAAAAGGTT | + |
Preference number: 6 (lower is better) Translates to: FVAMLYSAILKS*VLSTPLYQEKV Trigger: AACCTTTTCCTGGTACAAAGGTGTGCTTAGCACTCAGGACTTTAAAATTGCAGAATATAGCATAGCAACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | GATTTCTTGGCTCTTCTGTATCGAGCAATCTCAACCTaGTTAAATACAATCAGCCCTTTGTACCAGAAAAGT | + |
Preference number: 6 (lower is better) Translates to: DFLALLYRAIST*LNTISPLYQKS Trigger: ACTTTTCTGGTACAAAGGGCTGATTGTATTTAACAAGGTTGAGATTGCTCGATACAGAAGAGCCAAGAAATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | AAAGAGAGGAGTACACGTGCAAGTACAGGGATGTATTaGATACCATTTCTCCTTGTTTACTTATGGTTTGAA | + |
Preference number: 6 (lower is better) Translates to: KERSTRASTGMY*IPFLLVYLWFE Trigger: TTCAAACCATAAGTAAACAAGGAGAAATGGTATCAAATACATCCCTGTACTTGCACGTGTACTCCTCTCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |
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CDS CAA 72 bp | TTAAACTATAGTACAGTGCAATTGCATGTCTCAAATTaGTCATTCCTCTGTACCAGCCAAACACTAGAAGAT | + |
Preference number: 6 (lower is better) Translates to: LNYSTVQLHVSN*SFLCTSQTLED Trigger: ATCTTCTAGTGTTTGGCTGGTACAGAGGAATGACAAATTTGAGACATGCAATTGCACTGTACTATAGTTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019291.7 |