Pregenerated sensors for PSG27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070797Ensembl transcript IDs: ENSMUST00000094794.5
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCAGGTCGGGGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATaGATGGAAATCTGTAACTGGCAGGGGTGGGTAGATGTGGGCATC | + |
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Preference number: 1 (lower is better) Translates to: SGRGGMGEMANWPYK*MEICNWQGWVDVGI Trigger: GATGCCCACATCTACCCACCCCTGCCAGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| 3UTR-3UTR CCA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCCAGGTCGGGGAGGGATaGGAGAGATGGCCAACTGGC | + |
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Preference number: 2 (lower is better) Translates to: TDPKKLNKLESQGCIHKSQVGEG*ERWPTG Trigger: GCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTG...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| 3UTR CCA 72 bp | GGGGTTCAGGATCAGGTCGGGGAGGGATGGGAGAGATaGCCAACTGGCCATACAAATGAATGGAAATCTGTA | + |
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Preference number: 3 (lower is better) Translates to: GVQDQVGEGWER*PTGHTNEWKSV Trigger: TACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTGATCCTGAACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| 3UTR TCA 72 bp | GGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATaGATGGAAATCTGTAACTGGCAGGGGTGGGTAGAT | + |
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Preference number: 3 (lower is better) Translates to: GGMGEMANWPYK*MEICNWQGWVD Trigger: ATCTACCCACCCCTGCCAGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | CAGGTCGGGGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAAAAGGGCGCCCACAGGTaGAATGAGAGGAGTACACCT | + |
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Preference number: 4 (lower is better) Translates to: QVGEGWERWPTGHTNEWKKGAHR*NERSTP Trigger: AGGTGTACTCCTCTCATTTCACCTGTGGGCGCCCTT...TTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | CAGGTCGGGGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAAGCAGGGATCCATTGCTaGACACTGTCTCTCTACCGC | + |
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Preference number: 4 (lower is better) Translates to: QVGEGWERWPTGHTNEWKAGIHC*TLSLYR Trigger: GCGGTAGAGAGACAGTGTTCAGCAATGGATCCCTGC...TTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | GAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTGGCAGGGGTGGGTACACCCATTGCTaGGAAGCTCAGAGGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: ERWPTGHTNEWKSVTGRGGYTHC*EAQRMP Trigger: AGGCATCCTCTGAGCTTCTCAGCAATGGGTGTACCC...ACCCCTGCCAGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR GCA 90 bp | CAGGTCGGGGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCCATAGGGATCCATTaGTGTACAATATCTCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: QVGEGWERWPTGHTNEWKSIGIH*CTISLY Trigger: ATAGAGAGATATTGTACAGCAATGGATCCCTATGGA...TTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CCA 90 bp | GAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTGGCAGGGGTTTCTCAGTCAAATCCTaGAGCAGCAGGGATCCATTA | + |
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Preference number: 4 (lower is better) Translates to: ERWPTGHTNEWKSVTGRGFSVKS*SSRDPL Trigger: TAATGGATCCCTGCTGCTCCAGGATTTGACTGAGAA...ACCCCTGCCAGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAACTGTGTCCTCCTTGGTaGCATTTTGGATCCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: IHTLHCTDPKKLNKLESQLCPPW*HFGSIG Trigger: CCCTATGGATCCAAAATGTCACCAAGGAGGACACAG...TTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGCTCATCCTCTCTGTaGGCTGAAGACTCTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: IHTLHCTDPKKLNKLESQGSSSL*AEDSDC Trigger: ACAATCAGAGTCTTCAGCTCACAGAGAGGATGAGCC...TTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCCCTGAGTTGGCACTTTaGTGGAGACAGGCTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: TDPKKLNKLESQGCIHKSPELAL*WRQAHP Trigger: AGGATGAGCCTGTCTCCATCAAAGTGCCAACTCAGG...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CCA 90 bp | GAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTGTATGTATCCTGAGTTaGCACTTTGATGGAGACAGG | + |
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Preference number: 4 (lower is better) Translates to: EGWERWPTGHTNEWKSVTVCILS*HFDGDR Trigger: CCTGTCTCCATCAAAGTGCCAACTCAGGATACATAC...AGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | GAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTGGCAGGGGTTACTCTGGAAGATTGTaGACACGGAGAAAAACACTT | + |
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Preference number: 4 (lower is better) Translates to: ERWPTGHTNEWKSVTGRGYSGRL*TRRKTL Trigger: AAGTGTTTTTCTCCGTGTTCACAATCTTCCAGAGTA...ACCCCTGCCAGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR TCA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCTGTCTGAGAAGCAAGTaGAGACCACTGGGCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: TDPKKLNKLESQGCIHKSCLRSK*RPLGSV Trigger: TACAGAGCCCAGTGGTCTTCACTTGCTTCTCAGACA...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CCA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCAAGAGTGTCACAGCATaGGGAAAGGGAGGTGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: TDPKKLNKLESQGCIHKSKSVTA*GKGGVN Trigger: GTTGACACCTCCCTTTCCCCATGCTGTGACACTCTT...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR GCA 90 bp | GAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTGGCAGGGGTGAGCATGGAATACCTTaGTTTGCTATATTCTACAGT | + |
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Preference number: 4 (lower is better) Translates to: ERWPTGHTNEWKSVTGRGEHGIP*FAIFYS Trigger: ACTGTAGAATATAGCAAAGCAAGGTATTCCATGCTC...ACCCCTGCCAGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CCA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCCCAGGAAAAGGCTTGTaGATCTTTTGGCAGATTATA | + |
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Preference number: 4 (lower is better) Translates to: TDPKKLNKLESQGCIHKSPGKGL*IFWQII Trigger: TATAATCTGCCAAAAGATCCACAAGCCTTTTCCTGG...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CCA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAATACAGTTTTGAAGTATaGATTGCTATCTACGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: IHTLHCTDPKKLNKLESQYSFEV*IAIYAF Trigger: AAAGGCGTAGATAGCAATCCATACTTCAAAACTGTA...TTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS GCA 90 bp | GAGAGGAGCCAGCAGGTAAAGAGGGAGGCTGTGAGCAGAACCCTTTaGCAGGGGGTACACCCATTGCTGAGAAGCTCAGAGGATGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ERSQQVKREAVSRTL*QGVHPLLRSSEDAS Trigger: GGAGGCATCCTCTGAGCTTCTCAGCAATGGGTGTACCCCCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTTACCTGCTGGCTCCTCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 90 bp | AACACGGAGAAAAACACTTCCTCCTTCAGCAACTCTGGGCGGCACTaGTTCAATAGTGAGCTTGGCAGGGAAGGAAGGGCGCCCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: NTEKNTSSFSNSGRH*FNSELGREGRAPTG Trigger: ACCTGTGGGCGCCCTTCCTTCCCTGCCAAGCTCACTATTGAATCAGTGCCGCCCAGAGTTGCTGAAGGAGGAAGTGTTTTTCTCCGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 90 bp | CTTTCCCCTTCAGTAGCATGCCGAGTCACTGGATCGATCCTGAGTTaGGCAGAGTCAAGAGTGTCACAGCATGGGGAAAGGGAGGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LSPSVACRVTGSILS*AESRVSQHGEREVS Trigger: TGACACCTCCCTTTCCCCATGCTGTGACACTCTTGACTCTGCCCAACTCAGGATCGATCCAGTGACTCGGCATGCTACTGAAGGGGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | CAGGTCGGGGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAACAGGGGGTACACCCATaGCTGAGAAGCTCAGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: QVGEGWERWPTGHTNEWKQGVHP*LRSSED Trigger: ATCCTCTGAGCTTCTCAGCAATGGGTGTACCCCCTG...TTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | CAGGTCGGGGAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAAAGCAGCAGGGATCCATaGCTGAACACTGTCTCTCTA | + |
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Preference number: 5 (lower is better) Translates to: QVGEGWERWPTGHTNEWKSSRDP*LNTVSL Trigger: TAGAGAGACAGTGTTCAGCAATGGATCCCTGCTGCT...TTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTCCCCGACCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 90 bp | ACTCGTAGAAGAACATTTTCTCCTTCAACCACTTGGAGCGGTGAATaGATGGTGACTCGGGCAGTAGTGGAGAGGAGCCAGCAGGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: TRRRTFSPSTTWSGE*MVTRAVVERSQQVK Trigger: CTTTACCTGCTGGCTCCTCTCCACTACTGCCCGAGTCACCATCCATTCACCGCTCCAAGTGGTTGAAGGAGAAAATGTTCTTCTACGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 90 bp | ACTCTGATTGTTGAAGAGCCAACGGATGGAGACCCCAGTGTTGTCTaGGAAGCAAGTGAAGACCACTGGGCTCTGTACTCTAACTGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TLIVEEPTDGDPSVV*EASEDHWALYSNCA Trigger: AGCACAGTTAGAGTACAGAGCCCAGTGGTCTTCACTTGCTTCTCAGACAACACTGGGGTCTCCATCCGTTGGCTCTTCAACAATCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 90 bp | TCCAGCATCCTCCTTCCTCACAGTATGTATCCTGAGTTGGCACTTTaGTGGAGACAGGCTCATCCTCTCTGTGAGCTGAAGACTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SSILLPHSMYPELAL*WRQAHPLCELKTLI Trigger: AATCAGAGTCTTCAGCTCACAGAGAGGATGAGCCTGTCTCCATCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 90 bp | ACTGTGCTGTCTGTGACTCTCACAACAGGCTGTGTCACAAGCTTGTaGACGTTGATTTGCACGTGCAAGGTTTCAACTTTCACATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TVLSVTLTTGCVTSL*TLICTCKVSTFTLL Trigger: CAGCAATGTGAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGTCACAGACAGCACAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | GAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTTTCATCACGGCCAGGTaGACTGGAAGACTGGTCTTT | + |
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Preference number: 5 (lower is better) Translates to: EGWERWPTGHTNEWKSVTFITAR*TGRLVF Trigger: AAAGACCAGTCTTCCAGTCAACCTGGCCGTGATGAA...AGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 90 bp | ATTGTTATTAGTGTGTACAAGCCAGAGTCTTTCTCAGTCAAATCCTaGAGCAGCAGGGATCCATTAAGGTACCCAATCTCTCTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: IVISVYKPESFSVKS*SSRDPLRYPISLLL Trigger: CAGCAGAAGAGAGATTGGGTACCTTAATGGATCCCTGCTGCTCCAGGATTTGACTGAGAAAGACTCTGGCTTGTACACACTAATAACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | GAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTACCAGTTCTCCATGTTaGCTTATGGTTCGAAGAGTA | + |
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Preference number: 5 (lower is better) Translates to: EGWERWPTGHTNEWKSVTTSSPC*LMVRRV Trigger: TACTCTTCGAACCATAAGCAAACATGGAGAACTGGT...AGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS GCA 90 bp | CTCACAACAGGCTGTGTCACAAGCTTGTGGACGTTGATTTGCACGTaGAAGGTTTCAACTTTCACATTGCTGTCTATTGTTATTAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: LTTGCVTSLWTLICT*KVSTFTLLSIVISV Trigger: CACACTAATAACAATAGACAGCAATGTGAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCACAAGCTTGTGGACGTaGATTTGCACGTGCAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: TDPKKLNKLESQGCIHKSTSLWT*ICTCKV Trigger: AACCTTGCACGTGCAAATCAACGTCCACAAGCTTGT...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | ACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGGGTGTATACATAAATCCTATCCTGTGTCCTCCTaGGTGACATTTTGGATCCAT | + |
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Preference number: 5 (lower is better) Translates to: TDPKKLNKLESQGCIHKSYPVSS*VTFWIH Trigger: ATGGATCCAAAATGTCACCAAGGAGGACACAGGATA...GGATTTATGTATACACCCTTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | GAGGGATGGGAGAGATGGCCAACTGGCCATACAAATGAATGGAAATCTGTAACTGAAATGTGGATGTATTaGATACCAGTTCTCCATGTT | + |
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Preference number: 5 (lower is better) Translates to: EGWERWPTGHTNEWKSVTEMWMY*IPVLHV Trigger: AACATGGAGAACTGGTATCAAATACATCCACATTTC...AGTTACAGATTTCCATTCATTTGTATGGCCAGTTGGCCATCTCTCCCATCCCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 90 bp | GTTTGCTTATGGTTCGAAGAGTATAATATCCTGTGTCCTCCTTGGTaGCATTTTGGATCCATAGGGATCCATTGCTGTACAATATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VCLWFEEYNILCPPW*HFGSIGIHCCTISL Trigger: GAGAGATATTGTACAGCAATGGATCCCTATGGATCCAAAATGTCACCAAGGAGGACACAGGATATTATACTCTTCGAACCATAAGCAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS-3UTR CAA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGCTAAACAAGTTGGAAAGCCAAGTAAATGTAGTGCAATaGCAAGCTGCCAATTTTTCA | + |
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Preference number: 5 (lower is better) Translates to: IHTLHCTDPKKLNKLESQVNVVQ*QAANFS Trigger: TGAAAAATTGGCAGCTTGCAATTGCACTACATTTAC...TTGGCTTTCCAACTTGTTTAGCTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 90 bp | ACAGGTGAAATGAGAGGAGTACACCTGAAGAAATGTGGATGTATTTaGTACCAGTTCTCCATGTTTGCTTATGGTTCGAAGAGTATAATA | + |
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Preference number: 5 (lower is better) Translates to: TGEMRGVHLKKCGCI*YQFSMFAYGSKSII Trigger: TATTATACTCTTCGAACCATAAGCAAACATGGAGAACTGGTATCAAATACATCCACATTTCTTCAGGTGTACTCCTCTCATTTCACCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS GCA 72 bp | CAGCAGGTAAAGAGGGAGGCTGTGAGCAGAACCCTTTaGCAGGGGGTACACCCATTGCTGAGAAGCTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QQVKREAVSRTL*QGVHPLLRSSE Trigger: CTCTGAGCTTCTCAGCAATGGGTGTACCCCCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTTACCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 90 bp | ACTTTCCCCTTCAGTAGCATGCCGAGTCACTGGATCGATCCTGAGTaGGGCAGAGTCAAGAGTGTCACAGCATGGGGAAAGGGAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: TFPFSSMPSHWIDPE*GRVKSVTAWGKGGV Trigger: GACACCTCCCTTTCCCCATGCTGTGACACTCTTGACTCTGCCCAACTCAGGATCGATCCAGTGACTCGGCATGCTACTGAAGGGGAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 90 bp | ATCACGGCCAGGTTGACTGGAAGACTGGTCTTTGAGTTGGCTGGGTaGAAGGCCTCACATTGGTACTCTCCAGCATCCTCCTTCCTCACA | + |
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Preference number: 6 (lower is better) Translates to: ITARLTGRLVFELAG*KASHWYSPASSFLT Trigger: TGTGAGGAAGGAGGATGCTGGAGAGTACCAATGTGAGGCCTTCAACCCAGCCAACTCAAAGACCAGTCTTCCAGTCAACCTGGCCGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 90 bp | CACTCATTCATCACGGCCAGGTTGACTGGAAGACTGGTCTTTGAGTaGGCTGGGTTGAAGGCCTCACATTGGTACTCTCCAGCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSFITARLTGRLVFE*AGLKASHWYSPASS Trigger: GGAGGATGCTGGAGAGTACCAATGTGAGGCCTTCAACCCAGCCAACTCAAAGACCAGTCTTCCAGTCAACCTGGCCGTGATGAATGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 72 bp | AAAAACACTTCCTCCTTCAGCAACTCTGGGCGGCACTaGTTCAATAGTGAGCTTGGCAGGGAAGGAAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: KNTSSFSNSGRH*FNSELGREGRA Trigger: CGCCCTTCCTTCCCTGCCAAGCTCACTATTGAATCAGTGCCGCCCAGAGTTGCTGAAGGAGGAAGTGTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 72 bp | GTTGAAGAGCCAACGGATGGAGACCCCAGTGTTGTCTaGGAAGCAAGTGAAGACCACTGGGCTCTGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: VEEPTDGDPSVV*EASEDHWALYS Trigger: AGAGTACAGAGCCCAGTGGTCTTCACTTGCTTCTCAGACAACACTGGGGTCTCCATCCGTTGGCTCTTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | AGAACATTTTCTCCTTCAACCACTTGGAGCGGTGAATaGATGGTGACTCGGGCAGTAGTGGAGAGGAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: RTFSPSTTWSGE*MVTRAVVERSQ Trigger: CTGGCTCCTCTCCACTACTGCCCGAGTCACCATCCATTCACCGCTCCAAGTGGTTGAAGGAGAAAATGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | AGGTTGACTGGAAGACTGGTCTTTGAGTTGGCTGGGTaGAAGGCCTCACATTGGTACTCTCCAGCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLTGRLVFELAG*KASHWYSPASS Trigger: GGAGGATGCTGGAGAGTACCAATGTGAGGCCTTCAACCCAGCCAACTCAAAGACCAGTCTTCCAGTCAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | ATCACGGCCAGGTTGACTGGAAGACTGGTCTTTGAGTaGGCTGGGTTGAAGGCCTCACATTGGTACTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: ITARLTGRLVFE*AGLKASHWYSP Trigger: TGGAGAGTACCAATGTGAGGCCTTCAACCCAGCCAACTCAAAGACCAGTCTTCCAGTCAACCTGGCCGTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | AGGGATCCATTGCTGAACACTGTCTCTCTACCGCTGTaGGCAGGGCCTGGATCGCTTAAATTCTTGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RDPLLNTVSLPL*AGPGSLKFLSV Trigger: AACACTCAAGAATTTAAGCGATCCAGGCCCTGCCCACAGCGGTAGAGAGACAGTGTTCAGCAATGGATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | GATCCTGAGTTGGGCAGAGTCAAGAGTGTCACAGCATaGGGAAAGGGAGGTGTCAACCTGAAGGTAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: DPELGRVKSVTA*GKGGVNLKVNV Trigger: CACATTTACCTTCAGGTTGACACCTCCCTTTCCCCATGCTGTGACACTCTTGACTCTGCCCAACTCAGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 72 bp | CTCCTTCCTCACAGTATGTATCCTGAGTTGGCACTTTaGTGGAGACAGGCTCATCCTCTCTGTGAGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLPHSMYPELAL*WRQAHPLCELK Trigger: CTTCAGCTCACAGAGAGGATGAGCCTGTCTCCATCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 72 bp | ACTCTCCAGCATCCTCCTTCCTCACAGTATGTATCCTaGGTTGGCACTTTGATGGAGACAGGCTCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TLQHPPSSQYVS*VGTLMETGSSS Trigger: AGAGGATGAGCCTGTCTCCATCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 90 bp | CTAACTGTGCTGTCTGTGACTCTCACAACAGGCTGTGTCACAAGCTaGTGGACGTTGATTTGCACGTGCAAGGTTTCAACTTTCACATTG | + |
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Preference number: 6 (lower is better) Translates to: LTVLSVTLTTGCVTS*WTLICTCKVSTFTL Trigger: CAATGTGAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGTCACAGACAGCACAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 72 bp | CTCTCACAACAGGCTGTGTCACAAGCTTGTGGACGTTaGTTTGCACGTGCAAGGTTTCAACTTTCACATTGC | + |
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Preference number: 6 (lower is better) Translates to: LSQQAVSQACGR*FARARFQLSHC Trigger: GCAATGTGAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | AGTGTGTACAAGCCAGAGTCTTTCTCAGTCAAATCCTaGAGCAGCAGGGATCCATTAAGGTACCCAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVYKPESFSVKS*SSRDPLRYPIS Trigger: AGAGATTGGGTACCTTAATGGATCCCTGCTGCTCCAGGATTTGACTGAGAAAGACTCTGGCTTGTACACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | TCTGTGACTCTCACAACAGGCTGTGTCACAAGCTTGTaGACGTTGATTTGCACGTGCAAGGTTTCAACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVTLTTGCVTSL*TLICTCKVSTF Trigger: GAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGTCACAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 90 bp | CTGTCTGTGACTCTCACAACAGGCTGTGTCACAAGCTTGTGGACGTaGATTTGCACGTGCAAGGTTTCAACTTTCACATTGCTGTCTATT | + |
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Preference number: 6 (lower is better) Translates to: LSVTLTTGCVTSLWT*ICTCKVSTFTLLSI Trigger: AATAGACAGCAATGTGAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGTCACAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | ACTCTCACAACAGGCTGTGTCACAAGCTTGTGGACGTaGATTTGCACGTGCAAGGTTTCAACTTTCACATTG | + |
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Preference number: 6 (lower is better) Translates to: TLTTGCVTSLWT*ICTCKVSTFTL Trigger: CAATGTGAAAGTTGAAACCTTGCACGTGCAAATCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS TCA 72 bp | TGGTTCGAAGAGTATAATATCCTGTGTCCTCCTTGGTaGCATTTTGGATCCATAGGGATCCATTGCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: WFEEYNILCPPW*HFGSIGIHCCT Trigger: TGTACAGCAATGGATCCCTATGGATCCAAAATGTCACCAAGGAGGACACAGGATATTATACTCTTCGAACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 90 bp | TCTCTTCTGCTGTATGATTGGCCAATGAGCATGGAATACCTTGCTTaGCTATATTCTACAGTTTTGAAGTATGGATTGCTATCTACGCCT | + |
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Preference number: 6 (lower is better) Translates to: SLLLYDWPMSMEYLA*LYSTVLKYGLLSTP Trigger: AGGCGTAGATAGCAATCCATACTTCAAAACTGTAGAATATAGCAAAGCAAGGTATTCCATGCTCATTGGCCAATCATACAGCAGAAGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | TGGATGTATTTGATACCAGTTCTCCATGTTTGCTTATaGTTCGAAGAGTATAATATCCTGTGTCCTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: WMYLIPVLHVCL*FEEYNILCPPW Trigger: CCAAGGAGGACACAGGATATTATACTCTTCGAACCATAAGCAAACATGGAGAACTGGTATCAAATACATCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CCA 72 bp | ATACCTTGCTTTGCTATATTCTACAGTTTTGAAGTATaGATTGCTATCTACGCCTTTGTACCAGGAAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: IPCFAIFYSFEV*IAIYAFVPGKG Trigger: GCCTTTTCCTGGTACAAAGGCGTAGATAGCAATCCATACTTCAAAACTGTAGAATATAGCAAAGCAAGGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | AATGAGAGGAGTACACCTGAAGAAATGTGGATGTATTaGATACCAGTTCTCCATGTTTGCTTATGGTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: NERSTPEEMWMY*IPVLHVCLWFE Trigger: TTCGAACCATAAGCAAACATGGAGAACTGGTATCAAATACATCCACATTTCTTCAGGTGTACTCCTCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | CTTGCTTTGCTATATTCTACAGTTTTGAAGTATGGATaGCTATCTACGCCTTTGTACCAGGAAAAGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: LALLYSTVLKYG*LSTPLYQEKAC Trigger: ACAAGCCTTTTCCTGGTACAAAGGCGTAGATAGCAATCCATACTTCAAAACTGTAGAATATAGCAAAGCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | AGCATGGAATACCTTGCTTTGCTATATTCTACAGTTTaGAAGTATGGATTGCTATCTACGCCTTTGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: SMEYLALLYSTV*KYGLLSTPLYQ Trigger: CTGGTACAAAGGCGTAGATAGCAATCCATACTTCAAAACTGTAGAATATAGCAAAGCAAGGTATTCCATGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS GCA 72 bp | GAAATGTGGATGTATTTGATACCAGTTCTCCATGTTTaGTTATGGTTCGAAGAGTATAATATCCTGTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EMWMYLIPVLHV*LWFEEYNILCP Trigger: AGGACACAGGATATTATACTCTTCGAACCATAAGCAAACATGGAGAACTGGTATCAAATACATCCACATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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| CDS CAA 72 bp | CTGTATGATTGGCCAATGAGCATGGAATACCTTGCTTaGCTATATTCTACAGTTTTGAAGTATGGATTGCTA | + |
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Preference number: 6 (lower is better) Translates to: LYDWPMSMEYLA*LYSTVLKYGLL Trigger: TAGCAATCCATACTTCAAAACTGTAGAATATAGCAAAGCAAGGTATTCCATGCTCATTGGCCAATCATACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094794.5 |
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