Pregenerated sensors for PSG26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070799Ensembl transcript IDs: ENSMUST00000094798.5
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATGTGGGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATaGGAGAGATGGCAAATTGGCCATGACAATAAATGGAAATCTGTA | + |
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Preference number: 1 (lower is better) Translates to: MWEKMEGFRIRCGEG*ERWQIGHDNKWKSV Trigger: TACAGATTTCCATTTATTGTCATGGCCAATTTGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCCCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| 3UTR CAA 90 bp | AGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCAAATaGGCCATGACAATAAATGGAAATCTGTATTTTGTGTGTGAGGGT | + |
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Preference number: 2 (lower is better) Translates to: RGSGSGVERDGRDGK*AMTINGNLYFVCEG Trigger: ACCCTCACACACAAAATACAGATTTCCATTTATTGTCATGGCCAATTTGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| 3UTR CCA 72 bp | AAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATaGGAGAGATGGCAAATTGGCCATGACAATAAATGG | + |
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Preference number: 3 (lower is better) Translates to: KMEGFRIRCGEG*ERWQIGHDNKW Trigger: CCATTTATTGTCATGGCCAATTTGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| 3UTR TCA 72 bp | AAGATAAACAAATTAGAAGGCCAAAGAGAGGATATTTaGATCTCACATAGAAGGGAGAAAAATGGTAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: KINKLEGQREDI*ISHRREKNGSR Trigger: CCTACTACCATTTTTCTCCCTTCTATGTGAGATTCAAATATCCTCTCTTTGGCCTTCTAATTTGTTTATCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR GCA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCAGTGAGCAGAACCCTCTaGCAGGAGGTACACCCATTG | + |
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Preference number: 4 (lower is better) Translates to: GENGGVQDQVWRGMGEMAVSRTL*QEVHPL Trigger: CAATGGGTGTACCTCCTGGCAGAGGGTTCTGCTCAC...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | TATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCATGAGAGGAGGGCAGAGTCTTTCTCGGTaGCATCCTGGAGCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: YGHLNTEMPPPSYSMRGGQSLSR*HPGAAG Trigger: CCCTGCTGCTCCAGGATGTCACCGAGAAAGACTCTG...CCCTCCTCTCATGCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | GGGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCGTGAGCTGCAAACTCTaGTTGTTGAAGAGCCAACGG | + |
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Preference number: 4 (lower is better) Translates to: GRKWRGSGSGVERDGRDGVSCKL*LLKSQR Trigger: CCGTTGGCTCTTCAACAATCAGAGTTTGCAGCTCAC...GCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR GCA 90 bp | TATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCATGAGAGGAGGGCCCCCTTCAGCAGCGTaGTGTGGCACTGGATCAATG | + |
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Preference number: 4 (lower is better) Translates to: YGHLNTEMPPPSYSMRGGPPSAA*CGTGSM Trigger: CATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGG...CCCTCCTCTCATGCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | GGGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCGCAAACTCTGATTGTTaGAGAGCCAACGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: GRKWRGSGSGVERDGRDGANSDC*RANGWR Trigger: TCTCCATCCGTTGGCTCTTCAACAATCAGAGTTTGC...GCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCATCCTGTGTGACATTTTaGATCCACAGGGTCCCGTTG | + |
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Preference number: 4 (lower is better) Translates to: GENGGVQDQVWRGMGEMASCVTF*IHRVPL Trigger: CAACGGGACCCTGTGGATCCAAAATGTCACACAGGA...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCAGCAGCAGGGATCCATTaGTGTACCCTATCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GENGGVQDQVWRGMGEMAAAGIH*CTLSLF Trigger: GAAGAGAGATAGGGTACACCAATGGATCCCTGCTGC...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR GCA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCATACCAGGAAAAGGCTTaGAGACCTTCTGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: GENGGVQDQVWRGMGEMAYQEKA*RPSGRL Trigger: TAATCTGCCAGAAGGTCTGCAAGCCTTTTCCTGGTA...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | TGTGAGGGTAGGTATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCCAAGCTTGTGGATGTTaGCTTGGACGTGTGCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: CEGRYGHLNTEMPPPSYSQACGC*LGRVLL Trigger: TAACAGCACACGTCCAAGTCAACATCCACAAGCTTG...GCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATACCTACCCTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCATGTATGAGAAGCAAGTaGAGACAACTGAGCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: GENGGVQDQVWRGMGEMACMRSK*RQLSSV Trigger: TACAGAGCTCAGTTGTCTTCACTTGCTTCTCATACA...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR GCA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCAGTACAGCGAATGCAGTaGAATTGCTTGCCTCAAATT | + |
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Preference number: 4 (lower is better) Translates to: GENGGVQDQVWRGMGEMAVQRMQ*NCLPQI Trigger: AATTTGAGGCAAGCAATTGCACTGCATTCGCTGTAC...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | TGTGAGGGTAGGTATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCGCAAGTGAAGACAACTaGGCTCTGTACTCTAACTGT | + |
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Preference number: 4 (lower is better) Translates to: CEGRYGHLNTEMPPPSYSASEDN*ALYSNC Trigger: ACAGTTAGAGTACAGAGCTCAGTTGTCTTCACTTGC...GCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATACCTACCCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | AGGAAGCAGATGGAGGGAGGTAACTGTGTAGGAGAAGGGATGTGGGAGAAAATGCCTTCTGGCAGATTATaGACCTGGAGAAGAACACTT | + |
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Preference number: 4 (lower is better) Translates to: RKQMEGGNCVGEGMWEKMPSGRL*TWRRTL Trigger: AAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGG...CATTTTCTCCCACATCCCTTCTCCTACACAGTTACCTCCCTCCATCTGCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR GCA 90 bp | TGTGAGGGTAGGTATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCTGCAGTGCAATTGCTTaGCTCAAATTTGTCATTCCT | + |
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Preference number: 4 (lower is better) Translates to: CEGRYGHLNTEMPPPSYSCSAIA*LKFVIP Trigger: AGGAATGACAAATTTGAGGCAAGCAATTGCACTGCA...GCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATACCTACCCTCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | AATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAATACAGAACTGTGTCTTTCCAGGTaGCATTCTGGAGCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NGNLYFVCEGRYGHLNTELCLSR*HSGAAG Trigger: CCCTGCTGCTCCAGAATGTCACCTGGAAAGACACAG...TTCTGTATTCAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | ATGACAATAAATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAGCGTGCTGTGGCACTaGATCAATGCTGAGTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: MTINGNLYFVCEGRYGHLSVLWH*INAELG Trigger: GCCCAACTCAGCATTGATCCAGTGCCACAGCACGCT...CAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATTTATTGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | GAGGGATGGGAGAGATGGCAAATTGGCCATGACAATAAATGGAAATCTGTATTTTTCAGCAGCGTGCTGTaGCACTGGATCAATGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: EGWERWQIGHDNKWKSVFFSSVL*HWINAE Trigger: CTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAA...AAATACAGATTTCCATTTATTGTCATGGCCAATTTGCCATCTCTCCCATCCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | ATGACAATAAATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGCTGTGTCCTCCTGTGTaGCATTTTGGATCCACAGGG | + |
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Preference number: 4 (lower is better) Translates to: MTINGNLYFVCEGRYGHLLCPPV*HFGSTG Trigger: CCCTGTGGATCCAAAATGTCACACAGGAGGACACAG...CAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATTTATTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | AGGATATTTGAATCTCACATAGAAGGGAGAAAAATGGTAGTAGGAAGCAGATGGGCACTGGATCAATGCTaGGTTGGGCAGAGTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RIFESHIEGRKMVVGSRWALDQC*VGQSQE Trigger: CTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGC...CCATCTGCTTCCTACTACCATTTTTCTCCCTTCTATGTGAGATTCAAATATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | AATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAATACAGAATCATCACAGTCAGCCTaGCTGGGAGACTGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: NGNLYFVCEGRYGHLNTESSQSA*LGDWSL Trigger: CAAAGACCAGTCTCCCAGTCAGGCTGACTGTGATGA...TTCTGTATTCAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | AGGATATTTGAATCTCACATAGAAGGGAGAAAAATGGTAGTAGGAAGCAGATGGGGGTCATCCTCTCTGTaGGCTGCAAACTCTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: RIFESHIEGRKMVVGSRWGSSSL*AANSDC Trigger: ACAATCAGAGTTTGCAGCTCACAGAGAGGATGACCC...CCATCTGCTTCCTACTACCATTTTTCTCCCTTCTATGTGAGATTCAAATATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR GCA 90 bp | AGGATATTTGAATCTCACATAGAAGGGAGAAAAATGGTAGTAGGAAGCAGATGGTGTATAATGTCTCTCTaGCGCTGTGCTTCAGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: RIFESHIEGRKMVVGSRWCIMSL*RCASAP Trigger: AGGGGCTGAAGCACAGCGGCAGAGAGACATTATACA...CCATCTGCTTCCTACTACCATTTTTCTCCCTTCTATGTGAGATTCAAATATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | AATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAATACAGAAGGATCAATGCTGAGTTaGGCAGAGTCAAGAGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: NGNLYFVCEGRYGHLNTEGSMLS*AESRVS Trigger: TGACACTCTTGACTCTGCCCAACTCAGCATTGATCC...TTCTGTATTCAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | AATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAATACAGAATGGACCAGATTCCCTTaGTTTCTTGGCTCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: NGNLYFVCEGRYGHLNTEWTRFP*FLGSSV Trigger: TACAGAAGAGCCAAGAAATCAAGGGAATCTGGTCCA...TTCTGTATTCAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CCA 90 bp | ATGACAATAAATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGTGTGTCACAAGCTTGTaGATGTTGACTTGGACGTGT | + |
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Preference number: 4 (lower is better) Translates to: MTINGNLYFVCEGRYGHLCVTSL*MLTWTC Trigger: ACACGTCCAAGTCAACATCCACAAGCTTGTGACACA...CAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATTTATTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | AATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAATACAGAAGTACAGGGATGTATTTaGTACCATTTCTCCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: NGNLYFVCEGRYGHLNTEVQGCI*YHFSLF Trigger: AAACAAGGAGAAATGGTATCAAATACATCCCTGTAC...TTCTGTATTCAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR TCA 90 bp | ATGACAATAAATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGTACTTTGGAATATTGTaGACAAGGAGAAGAACGCTT | + |
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Preference number: 4 (lower is better) Translates to: MTINGNLYFVCEGRYGHLYFGIL*TRRRTL Trigger: AAGCGTTCTTCTCCTTGTTCACAATATTCCAAAGTA...CAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATTTATTGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 90 bp | GGCAGATTATGGACCTGGAGAAGAACACTTCCCCCTTCAGCAGCGTaGTGTGGCACTGGATCAATGCTGAGTTGGGCAGAGTCAAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: GRLWTWRRTLPPSAA*CGTGSMLSWAESRV Trigger: CACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 90 bp | GACCTGGAGAAGAACACTTCCCCCTTCAGCAGCGTGCTGTGGCACTaGATCAATGCTGAGTTGGGCAGAGTCAAGAGTGTCACAGCACAA | + |
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Preference number: 5 (lower is better) Translates to: DLEKNTSPFSSVLWH*INAELGRVKSVTAQ Trigger: TTGTGCTGTGACACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGGAAGTGTTCTTCTCCAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 90 bp | TGGAGCAGCAGGGATCCATTGCTGTACACTGTCTCTCTACCGCTGTaGGCTGGACCAGATTCCCTTGATTTCTTGGCTCTTCTGTATCGA | + |
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Preference number: 5 (lower is better) Translates to: WSSRDPLLYTVSLPL*AGPDSLDFLALLYR Trigger: TCGATACAGAAGAGCCAAGAAATCAAGGGAATCTGGTCCAGCCCACAGCGGTAGAGAGACAGTGTACAGCAATGGATCCCTGCTGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 90 bp | CACTTTGACGGGGACAGGGTCATCCTCTCTGTGAGCTGCAAACTCTaGTTGTTGAAGAGCCAACGGATGGAGATCCCAGTGTTGTATGAG | + |
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Preference number: 5 (lower is better) Translates to: HFDGDRVILSVSCKL*LLKSQRMEIPVLYE Trigger: CTCATACAACACTGGGATCTCCATCCGTTGGCTCTTCAACAATCAGAGTTTGCAGCTCACAGAGAGGATGACCCTGTCCCCGTCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 90 bp | TCCAGCATCCTCCTTCCTCACAGTATGTATCCTGAGTTGGCACTTTaGCGGGGACAGGGTCATCCTCTCTGTGAGCTGCAAACTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SSILLPHSMYPELAL*RGQGHPLCELQTLI Trigger: AATCAGAGTTTGCAGCTCACAGAGAGGATGACCCTGTCCCCGTCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CAA 90 bp | GGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCATTGCTTGCCTCAAATTaGTCATTCCTCTGTACCAGC | + |
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Preference number: 5 (lower is better) Translates to: GENGGVQDQVWRGMGEMALLASN*SFLCTS Trigger: GCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAA...TGCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CAA 90 bp | GGGAGAAAATGGAGGGGTTCAGGATCAGGTGTGGAGAGGGATGGGAGAGATGGCATGCAGTGCAATTGCTaGCCTCAAATTTGTCATTCC | + |
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Preference number: 5 (lower is better) Translates to: GRKWRGSGSGVERDGRDGMQCNC*PQICHS Trigger: GGAATGACAAATTTGAGGCAAGCAATTGCACTGCAT...GCCATCTCTCCCATCCCTCTCCACACCTGATCCTGAACCCCTCCATTTTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CAA 90 bp | TATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCATGAGAGGAGGGCTGGACCAGATTCCCTaGATTTCTTGGCTCTTCTGT | + |
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Preference number: 5 (lower is better) Translates to: YGHLNTEMPPPSYSMRGGLDQIP*ISWLFC Trigger: ACAGAAGAGCCAAGAAATCAAGGGAATCTGGTCCAG...CCCTCCTCTCATGCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CAA 90 bp | TGTGAGGGTAGGTATGGGCATCTGAATACAGAAATGCCCCCACCCTCCTATAGCGATTCCCTTGATTTCTaGGCTCTTCTGTATCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: CEGRYGHLNTEMPPPSYSDSLDF*ALLYRA Trigger: TGCTCGATACAGAAGAGCCAAGAAATCAAGGGAATC...GCTATAGGAGGGTGGGGGCATTTCTGTATTCAGATGCCCATACCTACCCTCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 90 bp | TGCTGTCTATTGTTATTAGTGTGTACAAGCCAGAGTCTTTCTCGGTaGCATCCTGGAGCAGCAGGGATCCATTGGTGTACCCTATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: CCLLLLVCTSQSLSR*HPGAAGIHWCTLSL Trigger: GAGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACCGAGAAAGACTCTGGCTTGTACACACTAATAACAATAGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 90 bp | ATTGTTATTAGTGTGTACAAGCCAGAGTCTTTCTCGGTGACATCCTaGAGCAGCAGGGATCCATTGGTGTACCCTATCTCTCTTCTGCTG | + |
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Preference number: 5 (lower is better) Translates to: IVISVYKPESFSVTS*SSRDPLVYPISLLL Trigger: CAGCAGAAGAGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACCGAGAAAGACTCTGGCTTGTACACACTAATAACAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 90 bp | GTGCTTCAGCCCCTTCACCGTTACACTATAGTACAGCGAATGCAGTaGAATTGCTTGCCTCAAATTTGTCATTCCTCTGTACCAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: VLQPLHRYTIVQRMQ*NCLPQICHSSVPAK Trigger: TTTGGCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACTATAGTGTAACGGTGAAGGGGCTGAAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 90 bp | GTGACTCTCATGGCAGGCTGTGTCACAAGCTTGTGGATGTTGACTTaGACGTGTGCTGTTAAAATTCTCACATTGCTGTCTATTGTTATT | + |
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Preference number: 5 (lower is better) Translates to: VTLMAGCVTSLWMLT*TCAVKILTLLSIVI Trigger: AATAACAATAGACAGCAATGTGAGAATTTTAACAGCACACGTCCAAGTCAACATCCACAAGCTTGTGACACAGCCTGCCATGAGAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS-3UTR CAA 90 bp | AATGGAAATCTGTATTTTGTGTGTGAGGGTAGGTATGGGCATCTGAATACAGAAATGGAGATCCCAGTGTaGTATGAGAAGCAAGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: NGNLYFVCEGRYGHLNTEMEIPV*YEKQVK Trigger: CTTCACTTGCTTCTCATACAACACTGGGATCTCCAT...TTCTGTATTCAGATGCCCATACCTACCCTCACACACAAAATACAGATTTCCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 90 bp | ACAGATGAAAAGAGAGGAGTACACGTGCAAGTACAGGGATGTATTTaGTACCATTTCTCCTTGTTTACTTATGGTTTGAAAAGTGTAATA | + |
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Preference number: 5 (lower is better) Translates to: TDEKRGVHVQVQGCI*YHFSLFTYGLKSVI Trigger: TATTACACTTTTCAAACCATAAGTAAACAAGGAGAAATGGTATCAAATACATCCCTGTACTTGCACGTGTACTCCTCTCTTTTCATCTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | TGGTGGGCAGGAACCAGCAGGTTAAGAGGGAGGCTGTaGGCAGAACCCTCTGCCAGGAGGTACACCCATTGC | + |
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Preference number: 6 (lower is better) Translates to: WWAGTSRLRGRL*AEPSARRYTHC Trigger: GCAATGGGTGTACCTCCTGGCAGAGGGTTCTGCTCACAGCCTCCCTCTTAACCTGCTGGTTCCTGCCCACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | CCCCTTCAGCAGCGTGCTGTGGCACTGGATCAATGCTaGGTTGGGCAGAGTCAAGAGTGTCACAGCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: PLQQRAVALDQC*VGQSQECHSTR Trigger: CCTTGTGCTGTGACACTCTTGACTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 72 bp | TGGACCTGGAGAAGAACACTTCCCCCTTCAGCAGCGTaGTGTGGCACTGGATCAATGCTGAGTTGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WTWRRTLPPSAA*CGTGSMLSWAE Trigger: CTCTGCCCAACTCAGCATTGATCCAGTGCCACAGCACGCTGCTGAAGGGGGAAGTGTTCTTCTCCAGGTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 90 bp | AAGCCAGAGTCTTTCTCGGTGACATCCTGGAGCAGCAGGGATCCATaGGTGTACCCTATCTCTCTTCTGCTGTGTGCACGGCCTCTGATG | + |
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Preference number: 6 (lower is better) Translates to: KPESFSVTSWSSRDP*VYPISLLLCARPLM Trigger: CATCAGAGGCCGTGCACACAGCAGAAGAGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACCGAGAAAGACTCTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | GGGGACAGGGTCATCCTCTCTGTGAGCTGCAAACTCTaGTTGTTGAAGAGCCAACGGATGGAGATCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GDRVILSVSCKL*LLKSQRMEIPV Trigger: CACTGGGATCTCCATCCGTTGGCTCTTCAACAATCAGAGTTTGCAGCTCACAGAGAGGATGACCCTGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 72 bp | CAGCAGGTTAAGAGGGAGGCTGTGAGCAGAACCCTCTaGCAGGAGGTACACCCATTGCTGAAAAGTTCAGAG | + |
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Preference number: 6 (lower is better) Translates to: QQVKREAVSRTL*QEVHPLLKSSE Trigger: CTCTGAACTTTTCAGCAATGGGTGTACCTCCTGGCAGAGGGTTCTGCTCACAGCCTCCCTCTTAACCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | CTCCTTCCTCACAGTATGTATCCTGAGTTGGCACTTTaGCGGGGACAGGGTCATCCTCTCTGTGAGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: LLPHSMYPELAL*RGQGHPLCELQ Trigger: TTGCAGCTCACAGAGAGGATGACCCTGTCCCCGTCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | ACTCTCCAGCATCCTCCTTCCTCACAGTATGTATCCTaGGTTGGCACTTTGACGGGGACAGGGTCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TLQHPPSSQYVS*VGTLTGTGSSS Trigger: AGAGGATGACCCTGTCCCCGTCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 72 bp | GAAAAGGCTTGCAGACCTTCTGGCAGATTATGGACCTaGAGAAGAACACTTCCCCCTTCAGCAGCGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: EKACRPSGRLWT*RRTLPPSAACC Trigger: ACAGCACGCTGCTGAAGGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGGTCTGCAAGCCTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 90 bp | TATCCTGTGTCCTCCTGTGTGACATTTTGGATCCACAGGGTCCCGTaGATGTATAATGTCTCTCTGCCGCTGTGCTTCAGCCCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: YPVSSCVTFWIHRVP*MYNVSLPLCFSPFT Trigger: GGTGAAGGGGCTGAAGCACAGCGGCAGAGAGACATTATACATCAACGGGACCCTGTGGATCCAAAATGTCACACAGGAGGACACAGGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 72 bp | AGGGATCCATTGCTGTACACTGTCTCTCTACCGCTGTaGGCTGGACCAGATTCCCTTGATTTCTTGGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RDPLLYTVSLPL*AGPDSLDFLAL Trigger: AAGAGCCAAGAAATCAAGGGAATCTGGTCCAGCCCACAGCGGTAGAGAGACAGTGTACAGCAATGGATCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 72 bp | AGTGTGTACAAGCCAGAGTCTTTCTCGGTGACATCCTaGAGCAGCAGGGATCCATTGGTGTACCCTATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVYKPESFSVTS*SSRDPLVYPIS Trigger: AGAGATAGGGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACCGAGAAAGACTCTGGCTTGTACACACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | TCCTCCTGTGTGACATTTTGGATCCACAGGGTCCCGTaGATGTATAATGTCTCTCTGCCGCTGTGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSCVTFWIHRVP*MYNVSLPLCFS Trigger: GCTGAAGCACAGCGGCAGAGAGACATTATACATCAACGGGACCCTGTGGATCCAAAATGTCACACAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | TTGTTATTAGTGTGTACAAGCCAGAGTCTTTCTCGGTaGCATCCTGGAGCAGCAGGGATCCATTGGTGTACC | + |
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Preference number: 6 (lower is better) Translates to: LLLVCTSQSLSR*HPGAAGIHWCT Trigger: GGTACACCAATGGATCCCTGCTGCTCCAGGATGTCACCGAGAAAGACTCTGGCTTGTACACACTAATAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | CTACCGCTGTGGGCTGGACCAGATTCCCTTGATTTCTaGGCTCTTCTGTATCGAGCAATCTCAACCTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: LPLWAGPDSLDF*ALLYRAISTLL Trigger: TAACAAGGTTGAGATTGCTCGATACAGAAGAGCCAAGAAATCAAGGGAATCTGGTCCAGCCCACAGCGGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | CTGTCTGTGACTCTCATGGCAGGCTGTGTCACAAGCTaGTGGATGTTGACTTGGACGTGTGCTGTTAAAATT | + |
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Preference number: 6 (lower is better) Translates to: LSVTLMAGCVTS*WMLTWTCAVKI Trigger: AATTTTAACAGCACACGTCCAAGTCAACATCCACAAGCTTGTGACACAGCCTGCCATGAGAGTCACAGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 90 bp | ACTGTCTCTCTACCGCTGTGGGCTGGACCAGATTCCCTTGATTTCTaGGCTCTTCTGTATCGAGCAATCTCAACCTTGTTAAATACAATC | + |
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Preference number: 6 (lower is better) Translates to: TVSLPLWAGPDSLDF*ALLYRAISTLLNTI Trigger: GATTGTATTTAACAAGGTTGAGATTGCTCGATACAGAAGAGCCAAGAAATCAAGGGAATCTGGTCCAGCCCACAGCGGTAGAGAGACAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 72 bp | CACCGTTACACTATAGTACAGCGAATGCAGTGCAATTaGTTGCCTCAAATTTGTCATTCCTCTGTACCAGCC | + |
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Preference number: 6 (lower is better) Translates to: HRYTIVQRMQCN*LPQICHSSVPA Trigger: GGCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACTATAGTGTAACGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 72 bp | GTAGGACGCCCACAGATGAAAAGAGAGGAGTACACGTaGAAGTACAGGGATGTATTTGATACCATTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: VGRPQMKREEYT*KYRDVFDTISP Trigger: AGGAGAAATGGTATCAAATACATCCCTGTACTTGCACGTGTACTCCTCTCTTTTCATCTGTGGGCGTCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 72 bp | CAAGGAAAGGGAGGTGTCCACCTGAAGGTAAATGTGTaGGAATTCCATTTTCTGATATCGAGTCAGAGTTCG | + |
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Preference number: 6 (lower is better) Translates to: QGKGGVHLKVNV*EFHFLISSQSS Trigger: CGAACTCTGACTCGATATCAGAAAATGGAATTCGCACACATTTACCTTCAGGTGGACACCTCCCTTTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS GCA 72 bp | CCCCTTCACCGTTACACTATAGTACAGCGAATGCAGTaGAATTGCTTGCCTCAAATTTGTCATTCCTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: PLHRYTIVQRMQ*NCLPQICHSSV Trigger: TACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACTATAGTGTAACGGTGAAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | TCACCGTTACACTATAGTACAGCGAATGCAGTGCAATaGCTTGCCTCAAATTTGTCATTCCTCTGTACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPLHYSTANAVQ*LASNLSFLCTS Trigger: GCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACTATAGTGTAACGGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | AGTACAGCGAATGCAGTGCAATTGCTTGCCTCAAATTaGTCATTCCTCTGTACCAGCCAAACACTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: STANAVQLLASN*SFLCTSQTLED Trigger: ATCTTCTAGTGTTTGGCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | CGTTACACTATAGTACAGCGAATGCAGTGCAATTGCTaGCCTCAAATTTGTCATTCCTCTGTACCAGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RYTIVQRMQCNC*PQICHSSVPAK Trigger: TTTGGCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACTATAGTGTAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 90 bp | TTACACTATAGTACAGCGAATGCAGTGCAATTGCTTGCCTCAAATTaGTCATTCCTCTGTACCAGCCAAACACTAGAAGATTCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LHYSTANAVQLLASN*SFLCTSQTLEDSLA Trigger: TGCCAGAGAATCTTCTAGTGTTTGGCTGGTACAGAGGAATGACAAATTTGAGGCAAGCAATTGCACTGCATTCGCTGTACTATAGTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CAA 72 bp | GGACGTGTGCTGTTAAAATTCTCACATTGCTGTCTATaGTTATTAGTGTGTACAAGCCAGAGTCTTTCTCGG | + |
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Preference number: 6 (lower is better) Translates to: GRVLLKFSHCCL*LLVCTSQSLSR Trigger: CCGAGAAAGACTCTGGCTTGTACACACTAATAACAATAGACAGCAATGTGAGAATTTTAACAGCACACGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | TTCGTTGCTATGCTATATTCTGCAATTTTAAAGTCCTaGGTGCTAAGCACACCTTTGTACCAGGAAAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: FVAMLYSAILKS*VLSTPLYQEKA Trigger: AGCCTTTTCCTGGTACAAAGGTGTGCTTAGCACTCAGGACTTTAAAATTGCAGAATATAGCATAGCAACGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS TCA 72 bp | AAGAGAGGAGTACACGTGCAAGTACAGGGATGTATTTaGTACCATTTCTCCTTGTTTACTTATGGTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: KRGVHVQVQGCI*YHFSLFTYGLK Trigger: TTTCAAACCATAAGTAAACAAGGAGAAATGGTATCAAATACATCCCTGTACTTGCACGTGTACTCCTCTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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| CDS CCA 72 bp | GGGATGTATTTGATACCATTTCTCCTTGTTTACTTATaGTTTGAAAAGTGTAATATCCTGTGTCCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GMYLIPFLLVYL*FEKCNILCPPV Trigger: CACAGGAGGACACAGGATATTACACTTTTCAAACCATAAGTAAACAAGGAGAAATGGTATCAAATACATCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094798.5 |
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