Pregenerated sensors for PSG25 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070798Ensembl transcript IDs: ENSMUST00000094795.5
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTAATCTCTaGCCTGTGAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCAT | + |
|
Preference number: 1 (lower is better) Translates to: LPGCCHALGDNGCNL*PVSQPQLNVVQDLH Trigger: ATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTCACAGGTCAGAGATTACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 90 bp | ATCGTACATCCATCTAGATGGTGTTCTGTAAGAGCAGCAATCCATTaGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: IVHPSRWCSVRAAIH*YAVCLRHCVQTQEV Trigger: CACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGATTGCTGCTCTTACAGAACACCATCTAGATGGATGTACGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR TCA 90 bp | AAAACGGAGGGATTCAGGATCAGGTGTAGGGAGGGATGGGAGAGATaGTCAGCTAACCATGAGAATGAATGGAAATCTGTAACAGGCAGT | + |
|
Preference number: 1 (lower is better) Translates to: KTEGFRIRCREGWER*SANHENEWKSVTGS Trigger: ACTGCCTGTTACAGATTTCCATTCATTCTCATGGTTAGCTGATCATCTCTCCCATCCCTCCCTACACCTGATCCTGAATCCCTCCGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR TCA 90 bp | TGCAACAATAGTAAGCAGAGCAGTGTGTGGAGGGTACCAGGAGTTTaGAAGAATGTACACAGACAATGTGGTGCCATATGCTCCATGGAG | + |
|
Preference number: 1 (lower is better) Translates to: CNNSKQSSVWRVPGV*KNVHRQCGAICSME Trigger: CTCCATGGAGCATATGGCACCACATTGTCTGTGTACATTCTTTCAAACTCCTGGTACCCTCCACACACTGCTCTGCTTACTATTGTTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 90 bp | CATGAGAATGAATGGAAATCTGTAACAGGCAGTGGTGGGGAGTTGTaGGTATCTCAATACAGAAATGCCCCACCCTGCTATAGCATGAGA | + |
|
Preference number: 1 (lower is better) Translates to: HENEWKSVTGSGGEL*VSQYRNAPPCYSMR Trigger: TCTCATGCTATAGCAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACTGCCTGTTACAGATTTCCATTCATTCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 90 bp | CCCCATACATTCATATATTTAGACAAGCCTATTAGGGCCAGGGAGTaGAATGTGATGGTTTATATATGCTTGTCCCAAGGTGTGGATTTG | + |
|
Preference number: 1 (lower is better) Translates to: PHTFIYLDKPIRARE*NVMVYICLSQGVDL Trigger: CAAATCCACACCTTGGGACAAGCATATATAAACCATCACATTCCACTCCCTGGCCCTAATAGGCTTGTCTAAATATATGAATGTATGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | GCAATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGATGGAGGGAGGGAATTaGGTAGGAGAGGTGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AIHWYAVCLRHCVQTQEVMEGGN*VGEVMW Trigger: CCACATCACCTCTCCTACCCAATTCCCTCCCTCCAT...CACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 90 bp | ATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGTTTATaGGTGTCTATGACAAACTGTGTGAGTCTATGGCTGTTGGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: MQCVSDTVYRPRRCL*VSMTNCVSLWLLGW Trigger: CCATCCCAACAGCCATAGACTCACACAGTTTGTCATAGACACCAATAAACACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | GTCTCAGACACTGTGTACAGACCCAGGAGGTGTTTATTGGTGTCTATGACAAACATCTGTAACAGGCAGTaGTGGGGAGTTGTGGGTATC | + |
|
Preference number: 2 (lower is better) Translates to: VSDTVYRPRRCLLVSMTNICNRQ*WGVVGI Trigger: GATACCCACAACTCCCCACCACTGCCTGTTACAGAT...GTTTGTCATAGACACCAATAAACACCTCCTGGGTCTGTACACAGTGTCTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTACTCAGTTACTCTCTTTaGTTCAGCAATTCTTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VLHHAFLDAAMLWVIMDVLSYSL*FSNSWN Trigger: GTTCCAAGAATTGCTGAACCAAAGAGAGTAACTGAG...TACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTAGACTTGCATTGTTCATaGTATCTGTGCACAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: VLHHAFLDAAMLWVIMDVDLHCS*YLCTVV Trigger: TACTACTGTGCACAGATACCATGAACAATGCAAGTC...TACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 90 bp | AACCATGAGAATGAATGGAAATCTGTAACAGGCAGTGGTGGGGAGTaGTGGGTATCTCAATACAGAAATGCCCCACCCTGCTATAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: NHENEWKSVTGSGGE*WVSQYRNAPPCYSM Trigger: CATGCTATAGCAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACTGCCTGTTACAGATTTCCATTCATTCTCATGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTAAACCATGAGAATGAATaGAAATCTGTAACAGGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VLHHAFLDAAMLWVIMDVNHENE*KSVTGS Trigger: ACTGCCTGTTACAGATTTCCATTCATTCTCATGGTT...TACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCTGTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGTCCATTAAGAACAAATaGAACATTTTCCCTTTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SAVLHHAFLDAAMLWVIMSIKNK*NIFPLG Trigger: GCCTAAAGGGAAAATGTTCCATTTGTTCTTAATGGA...CATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCACAGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 90 bp | CACTACACTACACTACACTACACAGACCCAAACAAGATAAACAAGTaGGAAGGCCAAGGGAGTATGCTTGAATCTCACATAATAGGGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HYTTLHYTDPNKINK*EGQGSMLESHIIGG Trigger: TCCCCCTATTATGTGAGATTCAAGCATACTCCCTTGGCCTTCCAACTTGTTTATCTTGTTTGGGTCTGTGTAGTGTAGTGTAGTGTAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | CTACACTACACTACACTACACTACACAGACCCAAACAAGATAAACAAGTTGGAATGTAACAGGCAGTGGTaGGGAGTTGTGGGTATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LHYTTLHYTDPNKINKLECNRQW*GVVGIS Trigger: TGAGATACCCACAACTCCCCACCACTGCCTGTTACA...TTCCAACTTGTTTATCTTGTTTGGGTCTGTGTAGTGTAGTGTAGTGTAGTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR TCA 90 bp | CTACACTACACTACACTACACTACACAGACCCAAACAAGATAAACAAGTTGGAACCAAGGGAGTATGCTTaGATCTCACATAATAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LHYTTLHYTDPNKINKLEPREYA*ISHNRG Trigger: CCCCCTATTATGTGAGATTCAAGCATACTCCCTTGG...TTCCAACTTGTTTATCTTGTTTGGGTCTGTGTAGTGTAGTGTAGTGTAGTGTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR TCA 90 bp | AATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGCACAGTAGTAAAATGCAGGGTACCAGGAGTTTaGAAGAATGTACACAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: NVVQDLHCSWYLCTVVKCRVPGV*KNVHRQ Trigger: TTGTCTGTGTACATTCTTTCAAACTCCTGGTACCCT...GCATTTTACTACTGTGCACAGATACCATGAACAATGCAAGTCTTGGACAACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGCCAAAATGGCATGAATaGTATGTACTCACTTATAAG | + |
|
Preference number: 2 (lower is better) Translates to: EPATIECCPRLALFMVSVPKWHE*YVLTYK Trigger: CTTATAAGTGAGTACATACCATTCATGCCATTTTGG...CACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CCA 90 bp | ATATATTTAGACAAGCCTATTAGGGCCAGGGAGTGGAATGTGATGGTTTATATAAGTGGTGGGGAGTTGTaGGTATCTCAATACAGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: IYLDKPIRAREWNVMVYISGGEL*VSQYRN Trigger: ATTTCTGTATTGAGATACCCACAACTCCCCACCACT...TATATAAACCATCACATTCCACTCCCTGGCCCTAATAGGCTTGTCTAAATATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR GCA 72 bp | AGAACTCTCAGCTGTGCTGCACCATGCCTTCCTGGATaGTGCCATGCTCTGGGTGATAATGGATGTAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: RTLSCAAPCLPG*CHALGDNGCNL Trigger: GAGATTACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCACAGCTGAGAGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR TCA 72 bp | AGTAAGCAGAGCAGTGTGTGGAGGGTACCAGGAGTTTaGAAGAATGTACACAGACAATGTGGTGCCATATGC | + |
|
Preference number: 3 (lower is better) Translates to: SKQSSVWRVPGV*KNVHRQCGAIC Trigger: GCATATGGCACCACATTGTCTGTGTACATTCTTTCAAACTCCTGGTACCCTCCACACACTGCTCTGCTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR TCA 72 bp | TGCTGCCATGCTCTGGGTGATAATGGATGTAATCTCTaGCCTGTGAGCCAGCCACAATTGAATGTTGTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CCHALGDNGCNL*PVSQPQLNVVQ Trigger: TTGGACAACATTCAATTGTGGCTGGCTCACAGGTCAGAGATTACATCCATTATCACCCAGAGCATGGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | CCATCTAGATGGTGTTCTGTAAGAGCAGCAATCCATTaGTATGCAGTGTGTCTCAGACACTGTGTACAGACC | + |
|
Preference number: 3 (lower is better) Translates to: PSRWCSVRAAIH*YAVCLRHCVQT Trigger: GGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGATTGCTGCTCTTACAGAACACCATCTAGATGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR TCA 72 bp | GGATTCAGGATCAGGTGTAGGGAGGGATGGGAGAGATaGTCAGCTAACCATGAGAATGAATGGAAATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: GFRIRCREGWER*SANHENEWKSV Trigger: TACAGATTTCCATTCATTCTCATGGTTAGCTGATCATCTCTCCCATCCCTCCCTACACCTGATCCTGAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CAA 90 bp | GACAATGTGGTGCCATATGCTCCATGGAGTACTATGCAACTATTAAATACAAAGGGCAGTGGTGGGGAGTaGTGGGTATCTCAATACAGA | + |
|
Preference number: 3 (lower is better) Translates to: DNVVPYAPWSTMQLLNTKGSGGE*WVSQYR Trigger: TCTGTATTGAGATACCCACAACTCCCCACCACTGCC...CTTTGTATTTAATAGTTGCATAGTACTCCATGGAGCATATGGCACCACATTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGGAGGGTACCAGGAGTTaGAAAGAATGTACACAGACA | + |
|
Preference number: 3 (lower is better) Translates to: EPATIECCPRLALFMVSVEGTRS*KECTQT Trigger: TGTCTGTGTACATTCTTTCAAACTCCTGGTACCCTC...CACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | GGTACCAGGAGTTTGAAAGAATGTACACAGACAATGTaGTGCCATATGCTCCATGGAGTACTATGCAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: GTRSLKECTQTM*CHMLHGVLCNY Trigger: ATAGTTGCATAGTACTCCATGGAGCATATGGCACCACATTGTCTGTGTACATTCTTTCAAACTCCTGGTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGTCTCAGTTACTCTCTTaGGTTCAGCAATTCTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPATIECCPRLALFMVSVSQLLS*VQQFLE Trigger: TTCCAAGAATTGCTGAACCAAAGAGAGTAACTGAGA...CACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | TGTTTATTGGTGTCTATGACAAACTGTGTGAGTCTATaGCTGTTGGGATGGTTAATAAGCTTAGGCCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: CLLVSMTNCVSL*LLGWLISLGQE Trigger: TTCCTGGCCTAAGCTTATTAACCATCCCAACAGCCATAGACTCACACAGTTTGTCATAGACACCAATAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | CCTGAGAGAGGTAACACAGTCCCAAAATGGCATGAATaGTATGTACTCACTTATAAGTGGATATTAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PERGNTVPKWHE*YVLTYKWILAI Trigger: TATGGCTAATATCCACTTATAAGTGAGTACATACCATTCATGCCATTTTGGGACTGTGTTACCTCTCTCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | TTCATATATTTAGACAAGCCTATTAGGGCCAGGGAGTaGAATGTGATGGTTTATATATGCTTGTCCCAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: FIYLDKPIRARE*NVMVYICLSQG Trigger: ACCTTGGGACAAGCATATATAAACCATCACATTCCACTCCCTGGCCCTAATAGGCTTGTCTAAATATATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | TCTATGACAAACTGTGTGAGTCTATGGCTGTTGGGATaGTTAATAAGCTTAGGCCAGGAAATAGCAATATTG | + |
|
Preference number: 3 (lower is better) Translates to: SMTNCVSLWLLG*LISLGQEIAIL Trigger: CAATATTGCTATTTCCTGGCCTAAGCTTATTAACCATCCCAACAGCCATAGACTCACACAGTTTGTCATAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | AGAATGTACACAGACAATGTGGTGCCATATGCTCCATaGAGTACTATGCAACTATTAAATACAAAGACATCA | + |
|
Preference number: 3 (lower is better) Translates to: RMYTDNVVPYAP*STMQLLNTKTS Trigger: TGATGTCTTTGTATTTAATAGTTGCATAGTACTCCATGGAGCATATGGCACCACATTGTCTGTGTACATTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CCA 72 bp | GTCAATCTCAGTTACTCTCTTTGGTTCAGCAATTCTTaGAACTCTATTTCCATTAAGAACAAATGGAACATT | + |
|
Preference number: 3 (lower is better) Translates to: VNLSYSLWFSNS*NSISIKNKWNI Trigger: AATGTTCCATTTGTTCTTAATGGAAATAGAGTTCCAAGAATTGCTGAACCAAAGAGAGTAACTGAGATTGAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTACTGTGTCCTCCTGGGTaGCATTTTGGATCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLHHAFLDAAMLWVIMDVLCPPG*HFGSTE Trigger: CTCTGTGGATCCAAAATGTCACCCAGGAGGACACAG...TACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | AACAGGCAGTGGTGGGGAGTTGTGGGTATCTCAATACAGAAATGCCCCACCCTGTTCTCAGTGACATCCTaGAGCAGCAGGGATCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: NRQWWGVVGISIQKCPTLFSVTS*SSRDPS Trigger: CGATGGATCCCTGCTGCTCCAGGATGTCACTGAGAA...CAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACTGCCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGTATGTATCCTGAGTTaGCACTTTGATGGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAVLHHAFLDAAMLWVIMVCILS*HFDGDR Trigger: CCTGTCCCCATCAAAGTGCCAACTCAGGATACATAC...CATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCACAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTAAGAGACCCATTTCTGTaGAATGTCTCTCTACCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLHHAFLDAAMLWVIMDVRDPFL*NVSLPL Trigger: CAGCGGTAGAGAGACATTGCACAGAAATGGGTCTCT...TACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTATATCCTGTGTCCTCCTaGGTGACATTTTGGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VLHHAFLDAAMLWVIMDVYPVSS*VTFWIH Trigger: GTGGATCCAAAATGTCACCCAGGAGGACACAGGATA...TACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GCAATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGGGCAGATTATGGACCTaGAGAAGAACACTTCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AIHWYAVCLRHCVQTQEVGRLWT*RRTLPP Trigger: AGGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCC...CACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGATTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | AGTGGTGGGGAGTTGTGGGTATCTCAATACAGAAATGCCCCACCCTGCTATAGCGCAGATTCTGATTGTTaGAGAGCCAACGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SGGELWVSQYRNAPPCYSADSDC*RANGWR Trigger: TCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGC...GCTATAGCAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | CCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGCACCTGTGTCTTTCCAGGTaGCATCCTGAAGCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PATIECCPRLALFMVSVHLCLSR*HPEAAG Trigger: CCCTGCTGCTTCAGGATGTCACCTGGAAAGACACAG...GTGCACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 72 bp | AATGAATGGAAATCTGTAACAGGCAGTGGTGGGGAGTaGTGGGTATCTCAATACAGAAATGCCCCACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NEWKSVTGSGGE*WVSQYRNAPPC Trigger: GCAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACTGCCTGTTACAGATTTCCATTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | CACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTAATCTCTTCCTGGGTGACATTTTaGATCCACAGAGACCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAFLDAAMLWVIMDVISSWVTF*IHRDPF Trigger: AAATGGGTCTCTGTGGATCCAAAATGTCACCCAGGA...AGAGATTACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCTGTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGACACCTGAAGGAACATaGATGTATTTGATTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SAVLHHAFLDAAMLWVIMTPEGT*MYLIPV Trigger: AACTGGAATCAAATACATCCATGTTCCTTCAGGTGT...CATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCACAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | CACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATGTAATCTCTGTAGAGGAGTACACCTaGAGGAACATGGATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAFLDAAMLWVIMDVISVEEYT*RNMDVF Trigger: AAATACATCCATGTTCCTTCAGGTGTACTCCTCTAC...AGAGATTACATCCATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | ATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGTTTATGACCTGGCTCACTTaGATTCTTGGCTGTTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: IHWYAVCLRHCVQTQEVFMTWLT*ILGCSV Trigger: TACAGAACAGCCAAGAATTCAAGTGAGCCAGGTCAT...AAACACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR GCA 90 bp | AGTGGTGGGGAGTTGTGGGTATCTCAATACAGAAATGCCCCACCCTGCTATAGCTACCAGGAAAAGGTTTaGAGATCTTCTGGCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: SGGELWVSQYRNAPPCYSYQEKV*RSSGRL Trigger: TAATCTGCCAGAAGATCTGCAAACCTTTTCCTGGTA...GCTATAGCAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 72 bp | GTCTCAGACACTGTGTACAGACCCAGGAGGTGTTTATaGGTGTCTATGACAAACTGTGTGAGTCTATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSDTVYRPRRCL*VSMTNCVSLWL Trigger: CAGCCATAGACTCACACAGTTTGTCATAGACACCAATAAACACCTCCTGGGTCTGTACACAGTGTCTGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | GAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGGATCCTGGTGTTGTCTaGGAAGCAAGTGAAGACAAC | + |
|
Preference number: 4 (lower is better) Translates to: EPATIECCPRLALFMVSVDPGVV*EASEDN Trigger: GTTGTCTTCACTTGCTTCTCAGACAACACCAGGATC...CACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | ATAGAACTTGAGAATAATATCCTGAGAGAGGTAACACAGTCCCAAAATGGCATGTTCCAGGTGACATCCTaGAGCAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IELENNILREVTQSQNGMFQVTS*SSRDPL Trigger: CAATGGATCCCTGCTGCTTCAGGATGTCACCTGGAA...CATGCCATTTTGGGACTGTGTTACCTCTCTCAGGATATTATTCTCAAGTTCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | ATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGTTTGCAATTTTAAAGCCATaGGTGTTATGCACACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: IHWYAVCLRHCVQTQEVFAILKP*VLCTPL Trigger: CAAAGGTGTGCATAACACTCATGGCTTTAAAATTGC...AAACACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR TCA 90 bp | GAAGGCCAAGGGAGTATGCTTGAATCTCACATAATAGGGGGAAAAATAGTTGTAGGGTCATCCTCTCTGTaGGCTGCAGATTCTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: EGQGSMLESHIIGGKIVVGSSSL*AADSDC Trigger: ACAATCAGAATCTGCAGCTCACAGAGAGGATGACCC...TACAACTATTTTTCCCCCTATTATGTGAGATTCAAGCATACTCCCTTGGCCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGGCTCACTTGAATTCTTaGCTGTTCTGTATCGAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: EPATIECCPRLALFMVSVAHLNS*LFCIEQ Trigger: TTGCTCGATACAGAACAGCCAAGAATTCAAGTGAGC...CACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GAGCCAGCCACAATTGAATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGTCTTCTGGCAGATTATaGACCTGGAGAAGAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: EPATIECCPRLALFMVSVSSGRL*TWRRTL Trigger: AAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGA...CACAGATACCATGAACAATGCAAGTCTTGGACAACATTCAATTGTGGCTGGCTC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCAAGGGAGTATGCTTGAATCTCACATAATAGGGGGAAAAATAGTTGTAAACGGATGGAGATCCTaGTGTTGTCTGAGAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EGQGSMLESHIIGGKIVVNGWRS*CCLRSK Trigger: CTTGCTTCTCAGACAACACCAGGATCTCCATCCGTT...TACAACTATTTTTCCCCCTATTATGTGAGATTCAAGCATACTCCCTTGGCCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 72 bp | TTGGTGTCTATGACAAACTGTGTGAGTCTATGGCTGTaGGGATGGTTAATAAGCTTAGGCCAGGAAATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LVSMTNCVSLWL*GWLISLGQEIA Trigger: TGCTATTTCCTGGCCTAAGCTTATTAACCATCCCAACAGCCATAGACTCACACAGTTTGTCATAGACACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR GCA 90 bp | ATATATTTAGACAAGCCTATTAGGGCCAGGGAGTGGAATGTGATGGTTTATATAGCAGCAGGGATCCATTaGTGTACACTGTCTCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IYLDKPIRAREWNVMVYIAAGIH*CTLSLY Trigger: GTAGAGAGACAGTGTACAGCAATGGATCCCTGCTGC...TATATAAACCATCACATTCCACTCCCTGGCCCTAATAGGCTTGTCTAAATATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR GCA 90 bp | ATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGTTTCGCTATGCTATATTCTaGAATTTTAAAGCCATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHWYAVCLRHCVQTQEVFRYAIF*NFKAMS Trigger: ACTCATGGCTTTAAAATTGCAGAATATAGCATAGCG...AAACACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCAAGGGAGTATGCTTGAATCTCACATAATAGGGGGAAAAATAGTTGTATGGAGTGGTAAAGAATaGATGATGACTCTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGQGSMLESHIIGGKIVVWSGKE*MMTLAV Trigger: CACTGCCAGAGTCATCATCCATTCTTTACCACTCCA...TACAACTATTTTTCCCCCTATTATGTGAGATTCAAGCATACTCCCTTGGCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | GAACAAATGGAACATTTTCCCTTTAGGCAGCACTGTGCAACAATAGTAAGCAGAGGATCGATGCTGAGTTaGGCAAAGTCAAGAGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: EQMEHFPFRQHCATIVSRGSMLS*AKSRVS Trigger: TGATACTCTTGACTTTGCCCAACTCAGCATCGATCC...TCTGCTTACTATTGTTGCACAGTGCTGCCTAAAGGGAAAATGTTCCATTTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| 3UTR CAA 72 bp | ACACTACACTACACAGACCCAAACAAGATAAACAAGTaGGAAGGCCAAGGGAGTATGCTTGAATCTCACATA | + |
|
Preference number: 4 (lower is better) Translates to: TLHYTDPNKINK*EGQGSMLESHI Trigger: TATGTGAGATTCAAGCATACTCCCTTGGCCTTCCAACTTGTTTATCTTGTTTGGGTCTGTGTAGTGTAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CCA 90 bp | CTACACTACACTACACTACACTACACAGACCCAAACAAGATAAACAAGTTGGAACGATTGAAGATGCTCTaGAAGATTGTGAACACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHYTTLHYTDPNKINKLERLKML*KIVNTE Trigger: CTCCGTGTTCACAATCTTCCAGAGCATCTTCAATCG...TTCCAACTTGTTTATCTTGTTTGGGTCTGTGTAGTGTAGTGTAGTGTAGTGTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR GCA 90 bp | TACACTACACTACACAGACCCAAACAAGATAAACAAGTTGGAAGGCCAAGGGAGTTACAACTCTCACATTaGTGTCTATTGCTATTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTTLHRPKQDKQVGRPRELQLSH*CLLLLV Trigger: CACTAATAGCAATAGACAGCAATGTGAGAGTTGTAA...CTCCCTTGGCCTTCCAACTTGTTTATCTTGTTTGGGTCTGTGTAGTGTAGTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGGATTCAATAGTGAGCTaGGCAGGGAAGAAAGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAVLHHAFLDAAMLWVIMDSIVS*AGKKGC Trigger: ACACCCTTTCTTCCCTGCCAAGCTCACTATTGAATC...CATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCACAGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 90 bp | CACTTTGATGGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTaGTTGTTGAAGAGCCAACGGATGGAGATCCTGGTGTTGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HFDGDRVILSVSCRF*LLKSQRMEILVLSE Trigger: CTCAGACAACACCAGGATCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | AACAGGCAGTGGTGGGGAGTTGTGGGTATCTCAATACAGAAATGCCCCACCCTGGGCTCACTTGAATTCTaGGCTGTTCTGTATCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NRQWWGVVGISIQKCPTLGSLEF*AVLYRA Trigger: TGCTCGATACAGAACAGCCAAGAATTCAAGTGAGCC...CAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACTGCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | CTCAGCTGTGCTGCACCATGCCTTCCTGGATGCTGCCATGCTCTGGGTGATAATGTACCAGGAAAAGGTTaGCAGATCTTCTGGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: LSCAAPCLPGCCHALGDNVPGKG*QIFWQI Trigger: AATCTGCCAGAAGATCTGCAAACCTTTTCCTGGTAC...ATTATCACCCAGAGCATGGCAGCATCCAGGAAGGCATGGTGCAGCACAGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CCA 90 bp | TTGTACCAGGAAAAGGTTTGCAGATCTTCTGGCAGATTATGGACCTaGAGAAGAACACTTCCCCCTTCGACAGCATACCGTGGCACTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LYQEKVCRSSGRLWT*RRTLPPSTAYRGTG Trigger: TCCAGTGCCACGGTATGCTGTCGAAGGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATCTGCAAACCTTTTCCTGGTACAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | GCAATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGGTGTTATGCACACCTTaGTACCAGGAAAAGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: AIHWYAVCLRHCVQTQEVVLCTP*YQEKVC Trigger: GCAAACCTTTTCCTGGTACAAAGGTGTGCATAACAC...CACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | AACAGGCAGTGGTGGGGAGTTGTGGGTATCTCAATACAGAAATGCCCCACCCTGCGAGCAATCTCAACCTaGTTAAATACAATCAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: NRQWWGVVGISIQKCPTLRAIST*LNTISP Trigger: AGGACTGATTGTATTTAACAAGGTTGAGATTGCTCG...CAGGGTGGGGCATTTCTGTATTGAGATACCCACAACTCCCCACCACTGCCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS GCA 90 bp | GTGTGCACGGCCGCTGATGATGGACTTCGTCGCTATGCTATATTCTaGAATTTTAAAGCCATGAGTGTTATGCACACCTTTGTACCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VCTAADDGLRRYAIF*NFKAMSVMHTFVPG Trigger: TCCTGGTACAAAGGTGTGCATAACACTCATGGCTTTAAAATTGCAGAATATAGCATAGCGACGAAGTCCATCATCAGCGGCCGTGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | GCAATCCATTGGTATGCAGTGTGTCTCAGACACTGTGTACAGACCCAGGAGGTGTCACATTGCTGTCTATaGCTATTAGTGTGTACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AIHWYAVCLRHCVQTQEVSHCCL*LLVCTS Trigger: GCTTGTACACACTAATAGCAATAGACAGCAATGTGA...CACCTCCTGGGTCTGTACACAGTGTCTGAGACACACTGCATACCAATGGATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS GCA 90 bp | TGGATCCACAGAGACCCATTTCTGTGCAATGTCTCTCTACCGCTGTaGTCAGGTCCAGTCACACTTACATTATATTGTAGTGAATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: WIHRDPFLCNVSLPL*SGPVTLTLYCSEYS Trigger: ACTGTATTCACTACAATATAATGTAAGTGTGACTGGACCTGAGCACAGCGGTAGAGAGACATTGCACAGAAATGGGTCTCTGTGGATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | GAACAAATGGAACATTTTCCCTTTAGGCAGCACTGTGCAACAATAGTAAGCAGACTCCTGGGTGACATTTaGGATCCACAGAGACCCATT | + |
|
Preference number: 5 (lower is better) Translates to: EQMEHFPFRQHCATIVSRLLGDI*DPQRPI Trigger: AATGGGTCTCTGTGGATCCAAAATGTCACCCAGGAG...TCTGCTTACTATTGTTGCACAGTGCTGCCTAAAGGGAAAATGTTCCATTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | GAAGGCCAAGGGAGTATGCTTGAATCTCACATAATAGGGGGAAAAATAGTTGTACAGGAGGTACACACTTaGCTGAAAAGTTCAAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EGQGSMLESHIIGGKIVVQEVHT*LKSSKD Trigger: GTCCTTTGAACTTTTCAGCAAAGTGTGTACCTCCTG...TACAACTATTTTTCCCCCTATTATGTGAGATTCAAGCATACTCCCTTGGCCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | ATAGAACTTGAGAATAATATCCTGAGAGAGGTAACACAGTCCCAAAATGGCATGCATGACCTGGCTCACTaGAATTCTTGGCTGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: IELENNILREVTQSQNGMHDLAH*NSWLFC Trigger: ACAGAACAGCCAAGAATTCAAGTGAGCCAGGTCATG...CATGCCATTTTGGGACTGTGTTACCTCTCTCAGGATATTATTCTCAAGTTCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | GACAATGTGGTGCCATATGCTCCATGGAGTACTATGCAACTATTAAATACAAAGTGGATCGATGCTGAGTaGGGCAAAGTCAAGAGTATC | + |
|
Preference number: 5 (lower is better) Translates to: DNVVPYAPWSTMQLLNTKWIDAE*GKVKSI Trigger: GATACTCTTGACTTTGCCCAACTCAGCATCGATCCA...CTTTGTATTTAATAGTTGCATAGTACTCCATGGAGCATATGGCACCACATTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS-3UTR CAA 90 bp | AATGTTGTCCAAGACTTGCATTGTTCATGGTATCTGTGCACAGTAGTAAAATGCATGGAGATCCTGGTGTaGTCTGAGAAGCAAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NVVQDLHCSWYLCTVVKCMEILV*SEKQVK Trigger: CTTCACTTGCTTCTCAGACAACACCAGGATCTCCAT...GCATTTTACTACTGTGCACAGATACCATGAACAATGCAAGTCTTGGACAACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 90 bp | GCAGGGAAGAAAGGGTGTCCACAGATGAAAGTAGAGGAGTACACCTaGAGGAACATGGATGTATTTGATTCCAGTTTTCCATTTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: AGKKGCPQMKVEEYT*RNMDVFDSSFPFLL Trigger: AAGTAAAAATGGAAAACTGGAATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCTACTTTCATCTGTGGACACCCTTTCTTCCCTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | GGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTaGTTGTTGAAGAGCCAACGGATGGAGATCCTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDRVILSVSCRF*LLKSQRMEILV Trigger: CACCAGGATCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | CTCCTTCCTCACAGTATGTATCCTGAGTTGGCACTTTaGTGGGGACAGGGTCATCCTCTCTGTGAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPHSMYPELAL*WGQGHPLCELQ Trigger: CTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | ACTCTCCAGCATCCTCCTTCCTCACAGTATGTATCCTaGGTTGGCACTTTGATGGGGACAGGGTCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLQHPPSSQYVS*VGTLMGTGSSS Trigger: AGAGGATGACCCTGTCCCCATCAAAGTGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS GCA 72 bp | TGGGTGACATTTTGGATCCACAGAGACCCATTTCTGTaGAATGTCTCTCTACCGCTGTGCTCAGGTCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: WVTFWIHRDPFL*NVSLPLCSGPV Trigger: GACTGGACCTGAGCACAGCGGTAGAGAGACATTGCACAGAAATGGGTCTCTGTGGATCCAAAATGTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CCA 72 bp | TCCGTGACTCTCACAACAGGCTGTGTCACAAGCTTGTaGACGTTGACTTGGACGTGTGCTCTTACAACTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SVTLTTGCVTSL*TLTWTCALTTL Trigger: GAGAGTTGTAAGAGCACACGTCCAAGTCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGTCACGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | GTGTCCGTGACTCTCACAACAGGCTGTGTCACAAGCTaGTGGACGTTGACTTGGACGTGTGCTCTTACAACT | + |
|
Preference number: 6 (lower is better) Translates to: VSVTLTTGCVTS*WTLTWTCALTT Trigger: AGTTGTAAGAGCACACGTCCAAGTCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGTCACGGACAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | CTCTCACAACAGGCTGTGTCACAAGCTTGTGGACGTTaGCTTGGACGTGTGCTCTTACAACTCTCACATTGC | + |
|
Preference number: 6 (lower is better) Translates to: LSQQAVSQACGR*LGRVLLQLSHC Trigger: GCAATGTGAGAGTTGTAAGAGCACACGTCCAAGTCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CCA 72 bp | GAAAAGGTTTGCAGATCTTCTGGCAGATTATGGACCTaGAGAAGAACACTTCCCCCTTCGACAGCATACCGT | + |
|
Preference number: 6 (lower is better) Translates to: EKVCRSSGRLWT*RRTLPPSTAYR Trigger: ACGGTATGCTGTCGAAGGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATCTGCAAACCTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CCA 72 bp | TACCAGGAAAAGGTTTGCAGATCTTCTGGCAGATTATaGACCTGGAGAAGAACACTTCCCCCTTCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YQEKVCRSSGRL*TWRRTLPPSTA Trigger: TGCTGTCGAAGGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATCTGCAAACCTTTTCCTGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CCA 72 bp | CACACCTTTGTACCAGGAAAAGGTTTGCAGATCTTCTaGCAGATTATGGACCTGGAGAAGAACACTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: HTFVPGKGLQIF*QIMDLEKNTSP Trigger: GGGGGAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATCTGCAAACCTTTTCCTGGTACAAAGGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | ACTCTCACAACAGGCTGTGTCACAAGCTTGTGGACGTaGACTTGGACGTGTGCTCTTACAACTCTCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: TLTTGCVTSLWT*TWTCALTTLTL Trigger: CAATGTGAGAGTTGTAAGAGCACACGTCCAAGTCAACGTCCACAAGCTTGTGACACAGCCTGTTGTGAGAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | TGGTACGAAGAGTGTAATATCCTGTGTCCTCCTGGGTaGCATTTTGGATCCACAGAGACCCATTTCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WYEECNILCPPG*HFGSTETHFCA Trigger: TGCACAGAAATGGGTCTCTGTGGATCCAAAATGTCACCCAGGAGGACACAGGATATTACACTCTTCGTACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | TGTCTCTCTACCACTGTGAGCATGACCTGGCTCACTTaGATTCTTGGCTGTTCTGTATCGAGCAATCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: CLSTTVSMTWLT*ILGCSVSSNLN Trigger: GTTGAGATTGCTCGATACAGAACAGCCAAGAATTCAAGTGAGCCAGGTCATGCTCACAGTGGTAGAGAGACA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | CTGTCTCTCTACCACTGTGAGCATGACCTGGCTCACTaGAATTCTTGGCTGTTCTGTATCGAGCAATCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLYHCEHDLAH*NSWLFCIEQSQ Trigger: TTGAGATTGCTCGATACAGAACAGCCAAGAATTCAAGTGAGCCAGGTCATGCTCACAGTGGTAGAGAGACAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS GCA 72 bp | CTGTGTCACAAGCTTGTGGACGTTGACTTGGACGTGTaGTCTTACAACTCTCACATTGCTGTCTATTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: LCHKLVDVDLDV*SYNSHIAVYCY Trigger: ATAGCAATAGACAGCAATGTGAGAGTTGTAAGAGCACACGTCCAAGTCAACGTCCACAAGCTTGTGACACAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS GCA 72 bp | AGAGACCCATTTCTGTGCAATGTCTCTCTACCGCTGTaGTCAGGTCCAGTCACACTTACATTATATTGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: RDPFLCNVSLPL*SGPVTLTLYCS Trigger: ACTACAATATAATGTAAGTGTGACTGGACCTGAGCACAGCGGTAGAGAGACATTGCACAGAAATGGGTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | ATGAGTGTTATGCACACCTTTGTACCAGGAAAAGGTTaGCAGATCTTCTGGCAGATTATGGACCTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MSVMHTFVPGKG*QIFWQIMDLEK Trigger: CTTCTCCAGGTCCATAATCTGCCAGAAGATCTGCAAACCTTTTCCTGGTACAAAGGTGTGCATAACACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | GGACGTGTGCTCTTACAACTCTCACATTGCTGTCTATaGCTATTAGTGTGTACAAGCCAGAGTCTTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: GRVLLQLSHCCL*LLVCTSQSLSQ Trigger: CTGAGAAAGACTCTGGCTTGTACACACTAATAGCAATAGACAGCAATGTGAGAGTTGTAAGAGCACACGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | ACGTTGACTTGGACGTGTGCTCTTACAACTCTCACATaGCTGTCTATTGCTATTAGTGTGTACAAGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TLTWTCALTTLT*LSIAISVYKPE Trigger: CTCTGGCTTGTACACACTAATAGCAATAGACAGCAATGTGAGAGTTGTAAGAGCACACGTCCAAGTCAACGT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS GCA 72 bp | GCCGCTGATGATGGACTTCGTCGCTATGCTATATTCTaGAATTTTAAAGCCATGAGTGTTATGCACACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: AADDGLRRYAIF*NFKAMSVMHTF Trigger: AAAGGTGTGCATAACACTCATGGCTTTAAAATTGCAGAATATAGCATAGCGACGAAGTCCATCATCAGCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | AAAGGGTGTCCACAGATGAAAGTAGAGGAGTACACCTaGAGGAACATGGATGTATTTGATTCCAGTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KGCPQMKVEEYT*RNMDVFDSSFP Trigger: TGGAAAACTGGAATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCTACTTTCATCTGTGGACACCCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS TCA 72 bp | TTCGTCGCTATGCTATATTCTGCAATTTTAAAGCCATaGGTGTTATGCACACCTTTGTACCAGGAAAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FVAMLYSAILKP*VLCTPLYQEKV Trigger: AACCTTTTCCTGGTACAAAGGTGTGCATAACACTCATGGCTTTAAAATTGCAGAATATAGCATAGCGACGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CCA 72 bp | TGGATGTATTTGATTCCAGTTTTCCATTTTTACTTATaGTACGAAGAGTGTAATATCCTGTGTCCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: WMYLIPVFHFYL*YEECNILCPPG Trigger: CCCAGGAGGACACAGGATATTACACTCTTCGTACCATAAGTAAAAATGGAAAACTGGAATCAAATACATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||
| CDS CAA 72 bp | GAATTCTTGGCTGTTCTGTATCGAGCAATCTCAACCTaGTTAAATACAATCAGTCCTTTGTACCAGAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: EFLAVLYRAIST*LNTISPLYQNS Trigger: GCTATTCTGGTACAAAGGACTGATTGTATTTAACAAGGTTGAGATTGCTCGATACAGAACAGCCAAGAATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094795.5 |
||