Pregenerated sensors for PSG22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044903Ensembl transcript IDs: ENSMUST00000051973.9, ENSMUST00000108481.8, ENSMUST00000208221.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTaGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCC | + |
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Preference number: 1 (lower is better) Translates to: GRNGQLAMRMNGNMY*QRWVGVGISIQKCP Trigger: GGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTAAGCAGATAAGGTGTGGGGAGGGATaGGAGAAATGGCCAACTGGC | + |
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Preference number: 2 (lower is better) Translates to: EACLISYKSGGNSCSKQIRCGEG*EKWPTG Trigger: GCCAGTTGGCCATTTCTCCCATCCCTCCCCACACCT...TATCTGCTTACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTAAGCAGATAATGTACTGGCAGAGGTaGGTAGGTGTGGGCATCTCA | + |
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Preference number: 2 (lower is better) Translates to: EACLISYKSGGNSCSKQIMYWQR*VGVGIS Trigger: TGAGATGCCCACACCTACCCACCTCTGCCAGTACAT...TATCTGCTTACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| 3UTR CCA 72 bp | GGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATaGAAATATGTACTGGCAGAGGTGGGTAGGTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: GWEKWPTGHANE*KYVLAEVGRCG Trigger: CCCACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | TACTGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTCTTAAGAGGGAGGCTGTaGGCAGAACCCTTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YWQRWVGVGISIQKCPTLLRGRL*AEPFAR Trigger: CCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTAA...GAGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | GTGTGGGCATCTCAATACAGAAATGCCCCACCCTCCTATAGCATGAGAGGAGGGCTGTGTCTTCCCAGGTaGCATTCTGGAGCAGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: VWASQYRNAPPSYSMRGGLCLPR*HSGAAE Trigger: CTCTGCTGCTCCAGAATGTCACCTGGGAAGACACAG...CCCTCCTCTCATGCTATAGGAGGGTGGGGCATTTCTGTATTGAGATGCCCACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | TGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTCCTAGAAGAACTTTGCTCCTaGAAGGCACCTGGACTCTGC | + |
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Preference number: 4 (lower is better) Translates to: WQRWVGVGISIQKCPTLLEELCS*KAPGLC Trigger: GCAGAGTCCAGGTGCCTTGCAGGAGCAAAGTTCTTC...TAGGAGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS-3UTR CCA 90 bp | TGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTCCTATTCAGCAGCATGCGGTaGCACTGGATTGATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: WQRWVGVGISIQKCPTLLFSSMR*HWIDPQ Trigger: CTGAGGATCAATCCAGTGCCACCGCATGCTGCTGAA...TAGGAGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | TGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTTAAGAGGGAGGCTGTaGGCAGAACCCTTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WPTGHANEWKYVLAEVGRLRGRL*AEPFAR Trigger: CCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTAA...CCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTTCAATAGTGAGGAGTaGAGGTGGAGAAGGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VGRDGRNGQLAMRMNGNMFNSEE*RWRRAP Trigger: GGGCGCCCTTCTCCACCTGCACTCCTCACTATTGAA...CATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | ACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTGGGTTCAATAGTGAGGAGTaGAGGTGGAGAAGGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGHANEWKYVLAEVGRCGFNSEE*RWRRAP Trigger: GGGCGCCCTTCTCCACCTGCACTCCTCACTATTGAA...CCCACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTTCCCCTTCAGCAGCATaGGGTGGCACTGGATTGATC | + |
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Preference number: 4 (lower is better) Translates to: GQLAMRMNGNMYWQRWVGSPSAA*GGTGLI Trigger: GATCAATCCAGTGCCACCGCATGCTGCTGAAGGGGA...ACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GTACTGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTAGAGGAGAAGAACTTTaGTCCTGCAAGGCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VLAEVGRCGHLNTEMPHPRGEEL*SCKAPG Trigger: TCCAGGTGCCTTGCAGGAGCAAAGTTCTTCTCCTCT...AGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS-3UTR TCA 90 bp | GGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGTGTCTTCCCAGGTaGCATTCTGGAGCAGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEGWEKWPTGHANEWKYVLCLPR*HSGAAE Trigger: CTCTGCTGCTCCAGAATGTCACCTGGGAAGACACAG...TACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTATTCAATAGTGAGGAGTaGAGGTGGAGAAGGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GEGWEKWPTGHANEWKYVFNSEE*RWRRAP Trigger: GGGCGCCCTTCTCCACCTGCACTCCTCACTATTGAA...TACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | CAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTGTCCCCTTCAGCAGCATaGGGTGGCACTGGATTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QLAMRMNGNMYWQRWVGVSPSAA*GGTGLI Trigger: GATCAATCCAGTGCCACCGCATGCTGCTGAAGGGGA...CACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTTCAGCAGCATGCGGTaGCACTGGATTGATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: VGRDGRNGQLAMRMNGNMFSSMR*HWIDPQ Trigger: CTGAGGATCAATCCAGTGCCACCGCATGCTGCTGAA...CATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | TGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTTCAGCAGCATGCGGTaGCACTGGATTGATCCTCAG | + |
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Preference number: 4 (lower is better) Translates to: WPTGHANEWKYVLAEVGRFSSMR*HWIDPQ Trigger: CTGAGGATCAATCCAGTGCCACCGCATGCTGCTGAA...CCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | GTACTGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTAGGGCCCATTTCACTTaGATTCTTGACTGTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VLAEVGRCGHLNTEMPHPRAHFT*ILDCSV Trigger: CACAGAACAGTCAAGAATTCAAGTGAAATGGGCCCT...AGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | TGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTCTGAGAAGCAAGTaGAGACCACTGAGCCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: WPTGHANEWKYVLAEVGRCLRSK*RPLSPV Trigger: TACAGGGCTCAGTGGTCTTCACTTGCTTCTCAGACA...CCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | GGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTTGTCTGAGAAGCAAGTaGAGACCACTGAGCCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: GQLAMRMNGNMYWQRWVGCLRSK*RPLSPV Trigger: TACAGGGCTCAGTGGTCTTCACTTGCTTCTCAGACA...ACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACGGCAGATTATGGACCTaGAGAAGAACCCTTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GRDGRNGQLAMRMNGNMYGRLWT*RRTLSP Trigger: AGGGGAAAGGGTTCTTCTCCAGGTCCATAATCTGCC...GTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTAGGCAGATTATGGACCTaGAGAAGAACCCTTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GEGWEKWPTGHANEWKYVGRLWT*RRTLSP Trigger: AGGGGAAAGGGTTCTTCTCCAGGTCCATAATCTGCC...TACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | TGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGAGGGCCCATTTCACTTaGATTCTTGACTGTTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WPTGHANEWKYVLAEVGRRAHFT*ILDCSV Trigger: CACAGAACAGTCAAGAATTCAAGTGAAATGGGCCCT...CCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GTACTGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTTTGTTCACATTGACTTaGACATGGGCTGTTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: VLAEVGRCGHLNTEMPHPLFTLT*TWAVST Trigger: AGTTGAAACAGCCCATGTGCAAGTCAATGTGAACAA...AGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTTTCAACCAATTTGGGTaGTACGGATTCGATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: GQLAMRMNGNMYWQRWVGFNQFG*YGFDGD Trigger: GTCACCATCGAATCCGTACCACCCAAATTGGTTGAA...ACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | AAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTGGCAGATTATGGACCTaGAGAAGAACCCTTTCCCCT | + |
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Preference number: 4 (lower is better) Translates to: KWPTGHANEWKYVLAEVGGRLWT*RRTLSP Trigger: AGGGGAAAGGGTTCTTCTCCAGGTCCATAATCTGCC...ACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | TACTGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTCTTTCAACTTTCACATTaGTGTCGATTGTTACTAGTG | + |
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Preference number: 4 (lower is better) Translates to: YWQRWVGVGISIQKCPTLFQLSH*CRLLLV Trigger: CACTAGTAACAATCGACAGCAATGTGAAAGTTGAAA...GAGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | AAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTTTCAACCAATTTGGGTaGTACGGATTCGATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: KWPTGHANEWKYVLAEVGFNQFG*YGFDGD Trigger: GTCACCATCGAATCCGTACCACCCAAATTGGTTGAA...ACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | ACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTGGGACATTGACTTGCACATaGGCTGTTTCAACTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: TGHANEWKYVLAEVGRCGTLTCT*AVSTFT Trigger: TGTGAAAGTTGAAACAGCCCATGTGCAAGTCAATGT...CCCACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | ACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTGGGTACCACAAAAAGGTTTaGACATCTTCTGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: TGHANEWKYVLAEVGRCGYHKKV*TSSGRL Trigger: TAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTA...CCCACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTTACCACAAAAAGGTTTaGACATCTTCTGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: GQLAMRMNGNMYWQRWVGYHKKV*TSSGRL Trigger: TAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTA...ACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GTGTGGGCATCTCAATACAGAAATGCCCCACCCTCCTATAGCATGAGAGGAGGGTTTCAACTTTCACATTaGTGTCGATTGTTACTAGTG | + |
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Preference number: 4 (lower is better) Translates to: VWASQYRNAPPSYSMRGGFQLSH*CRLLLV Trigger: CACTAGTAACAATCGACAGCAATGTGAAAGTTGAAA...CCCTCCTCTCATGCTATAGGAGGGTGGGGCATTTCTGTATTGAGATGCCCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | CAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTGTTGTTCACATTGACTTaGACATGGGCTGTTTCAACT | + |
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Preference number: 4 (lower is better) Translates to: QLAMRMNGNMYWQRWVGVLFTLT*TWAVST Trigger: AGTTGAAACAGCCCATGTGCAAGTCAATGTGAACAA...CACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR TCA 90 bp | GAGGCCAAGGAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTTGTCTGAGAAGCAAGTaGAGACCACTGAGCCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: EAKEACLISYKSGGNSCSCLRSK*RPLSPV Trigger: TACAGGGCTCAGTGGTCTTCACTTGCTTCTCAGACA...ACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTCCTTGGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTACCACAAAAAGGTTTaGACATCTTCTGGCAGATTA | + |
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Preference number: 4 (lower is better) Translates to: GRDGRNGQLAMRMNGNMYYHKKV*TSSGRL Trigger: TAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTA...GTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | AAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTACATTGACTTGCACATaGGCTGTTTCAACTTTCACA | + |
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Preference number: 4 (lower is better) Translates to: KWPTGHANEWKYVLAEVGTLTCT*AVSTFT Trigger: TGTGAAAGTTGAAACAGCCCATGTGCAAGTCAATGT...ACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTAAGCAGATACTCCTGCAAGGCACCTaGACTCTGCTGTCCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: EACLISYKSGGNSCSKQILLQGT*TLLSFL Trigger: GAGGAAGGACAGCAGAGTCCAGGTGCCTTGCAGGAG...TATCTGCTTACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS-3UTR TCA 90 bp | GAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTAAGCAGATATTAAGAGGGAGGCTGTaGGCAGAACCCTTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EACLISYKSGGNSCSKQILRGRL*AEPFAR Trigger: CCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTAA...TATCTGCTTACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | CAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGGTGTGTCACCTGAAGGAATATaGATGTATTTGATACCACTT | + |
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Preference number: 4 (lower is better) Translates to: QLAMRMNGNMYWQRWVGVSPEGI*MYLIPL Trigger: AAGTGGTATCAAATACATCCATATTCCTTCAGGTGA...CACACCTACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GAGGCCAAGGAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTTTCAACCAATTTGGGTaGTACGGATTCGATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: EAKEACLISYKSGGNSCSFNQFG*YGFDGD Trigger: GTCACCATCGAATCCGTACCACCCAAATTGGTTGAA...ACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTCCTTGGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CCA 90 bp | GAGGCCAAGGAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTTCACCTGAAGGAATATaGATGTATTTGATACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: EAKEACLISYKSGGNSCSSPEGI*MYLIPL Trigger: AAGTGGTATCAAATACATCCATATTCCTTCAGGTGA...ACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTCCTTGGCCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR GCA 90 bp | GAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTAAGCAGATATTTCAACTTTCACATTaGTGTCGATTGTTACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EACLISYKSGGNSCSKQIFQLSH*CRLLLV Trigger: CACTAGTAACAATCGACAGCAATGTGAAAGTTGAAA...TATCTGCTTACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 90 bp | GGCAAGAGCCAGCAGGTTAAGAGGGAGGCTGTGAGCAGAACCCTTTaGCAGGAGGTCCACCCATTGCTGAGAAGCTCAGAGGATACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GKSQQVKREAVSRTL*QEVHPLLRSSEDTS Trigger: GGAGGTATCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTAACCTGCTGGCTCTTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CAA 90 bp | TGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTCCTACAGGAGGTCCACCCATaGCTGAGAAGCTCAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: WQRWVGVGISIQKCPTLLQEVHP*LRSSED Trigger: ATCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTG...TAGGAGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CAA 90 bp | TACTGGCAGAGGTGGGTAGGTGTGGGCATCTCAATACAGAAATGCCCCACCCTCCAGGAGGTCCACCCATaGCTGAGAAGCTCAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: YWQRWVGVGISIQKCPTLQEVHP*LRSSED Trigger: ATCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTG...GAGGGTGGGGCATTTCTGTATTGAGATGCCCACACCTACCCACCTCTGCCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS TCA 90 bp | CACTTTGATGGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTaGTTGTTGAAGAGCCAACGGATGGAGACCCCAGTGTTGTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HFDGDRVILSVSCRF*LLKSQRMETPVLSE Trigger: CTCAGACAACACTGGGGTCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CAA 90 bp | AAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTCAGGAGGTCCACCCATaGCTGAGAAGCTCAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KWPTGHANEWKYVLAEVGQEVHP*LRSSED Trigger: ATCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTG...ACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CAA 90 bp | GTGGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGATTTCACTTGAATTCTaGACTGTTCTGTGCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGRDGRNGQLAMRMNGNMISLEF*TVLCRA Trigger: TGCTCGGCACAGAACAGTCAAGAATTCAAGTGAAAT...CATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS-3UTR CAA 90 bp | GTGGGGAGGGATGGGAGAAATGGCCAACTGGCCATGCGAATGAATGGAAATATGAGCAGCAGGGATCCATaGATGAACAATATCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VGRDGRNGQLAMRMNGNMSSRDP*MNNISL Trigger: AAGAGAGATATTGTTCATCAATGGATCCCTGCTGCT...CATATTTCCATTCATTCGCATGGCCAGTTGGCCATTTCTCCCATCCCTCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS TCA 90 bp | GCTGTACACTATCTCTCTACCGCTGTAGGCAGGGCCCATTTCACTTaGATTCTTGACTGTTCTGTGCCGAGCAATCTCAACCTTGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: AVHYLSTAVGRAHFT*ILDCSVPSNLNLVK Trigger: TTTAACAAGGTTGAGATTGCTCGGCACAGAACAGTCAAGAATTCAAGTGAAATGGGCCCTGCCTACAGCGGTAGAGAGATAGTGTACAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
||
| CDS-3UTR CAA 90 bp | AAATGGCCAACTGGCCATGCGAATGAATGGAAATATGTACTGGCAGAGGTGGGTAGCAGCAGGGATCCATaGATGAACAATATCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KWPTGHANEWKYVLAEVGSSRDP*MNNISL Trigger: AAGAGAGATATTGTTCATCAATGGATCCCTGCTGCT...ACCCACCTCTGCCAGTACATATTTCCATTCATTCGCATGGCCAGTTGGCCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 90 bp | GAGCAGCAGGGATCCATTGATGAACAATATCTCTCTTCCACTGTGTaGATAGCCATTGATGAGAGACTCTGTCACTATGCTATACTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EQQGSIDEQYLSSTV*IAIDERLCHYAILC Trigger: ACAGAGTATAGCATAGTGACAGAGTCTCTCATCAATGGCTATGCACACAGTGGAAGAGAGATATTGTTCATCAATGGATCCCTGCTGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCCAAGGAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTATTTCACTTGAATTCTaGACTGTTCTGTGCCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EAKEACLISYKSGGNSCSISLEF*TVLCRA Trigger: TGCTCGGCACAGAACAGTCAAGAATTCAAGTGAAAT...ACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTCCTTGGCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCATGTTTAATCTCATATAAAAGCGGGGGAAATAGTTGTAGTAAGCAGATAAGCAGCAGGGATCCATaGATGAACAATATCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EACLISYKSGGNSCSKQISSRDP*MNNISL Trigger: AAGAGAGATATTGTTCATCAATGGATCCCTGCTGCT...TATCTGCTTACTACAACTATTTCCCCCGCTTTTATATGAGATTAAACATGCTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
||
| CDS TCA 72 bp | AAGAACGCTTCCCCCTTCAGCAACGCTGGCTGGCACTaGTTCAATAGTGAGGAGTGCAGGTGGAGAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KNASPFSNAGWH*FNSEECRWRRA Trigger: CGCCCTTCTCCACCTGCACTCCTCACTATTGAATCAGTGCCAGCCAGCGTTGCTGAAGGGGGAAGCGTTCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 72 bp | CAGCAGGTTAAGAGGGAGGCTGTGAGCAGAACCCTTTaGCAGGAGGTCCACCCATTGCTGAGAAGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQVKREAVSRTL*QEVHPLLRSSE Trigger: CTCTGAGCTTCTCAGCAATGGGTGGACCTCCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTAACCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS TCA 72 bp | GGGGACAGGGTCATCCTCTCTGTGAGCTGCAGATTCTaGTTGTTGAAGAGCCAACGGATGGAGACCCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: GDRVILSVSCRF*LLKSQRMETPV Trigger: CACTGGGGTCTCCATCCGTTGGCTCTTCAACAATCAGAATCTGCAGCTCACAGAGAGGATGACCCTGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 72 bp | GTACTGGCCTTTCTCAGAGGAGAAGAACTTTGCTCCTaGAAGGCACCTGGACTCTGCTGTCCTTCCTCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: VLAFLRGEELCS*KAPGLCCPSSF Trigger: GAAGGAGGAAGGACAGCAGAGTCCAGGTGCCTTGCAGGAGCAAAGTTCTTCTCCTCTGAGAAAGGCCAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS CAA 72 bp | TGCGGTGGCACTGGATTGATCCTCAGTTGGACAGAGTaGAAATCGTCACAGCACGAGGAAAGGGAGGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: CGGTGLILSWTE*KSSQHEEREVS Trigger: GGACACCTCCCTTTCCTCGTGCTGTGACGATTTCAACTCTGTCCAACTGAGGATCAATCCAGTGCCACCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CCA 72 bp | TCAGCAGCATGCGGTGGCACTGGATTGATCCTCAGTTaGACAGAGTTGAAATCGTCACAGCACGAGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAACGGTGLILS*TELKSSQHEER Trigger: CCTTTCCTCGTGCTGTGACGATTTCAACTCTGTCCAACTGAGGATCAATCCAGTGCCACCGCATGCTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 72 bp | GCTGTGAGCAGAACCCTTTGCCAGGAGGTCCACCCATaGCTGAGAAGCTCAGAGGATACCTCCATATCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: AVSRTLCQEVHP*LRSSEDTSISL Trigger: AAGAGATATGGAGGTATCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTGGCAAAGGGTTCTGCTCACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS CAA 90 bp | TGGAGAAGAACCCTTTCCCCTTCAGCAGCATGCGGTGGCACTGGATaGATCCTCAGTTGGACAGAGTTGAAATCGTCACAGCACGAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: WRRTLSPSAACGGTG*ILSWTELKSSQHEE Trigger: TTCCTCGTGCTGTGACGATTTCAACTCTGTCCAACTGAGGATCAATCCAGTGCCACCGCATGCTGCTGAAGGGGAAAGGGTTCTTCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 90 bp | CATATCTCTTCTCACTGTACTGGCCTTTCTCAGAGGAGAAGAACTTaGCTCCTGCAAGGCACCTGGACTCTGCTGTCCTTCCTCCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HISSHCTGLSQRRRT*LLQGTWTLLSFLLL Trigger: CAGAAGGAGGAAGGACAGCAGAGTCCAGGTGCCTTGCAGGAGCAAAGTTCTTCTCCTCTGAGAAAGGCCAGTACAGTGAGAAGAGATATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS TCA 72 bp | AACGGATGGAGACCCCAGTGTTGTCTGAGAAGCAAGTaGAGACCACTGAGCCCTGTATTCGAACTGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NGWRPQCCLRSK*RPLSPVFELCC Trigger: ACAGCACAGTTCGAATACAGGGCTCAGTGGTCTTCACTTGCTTCTCAGACAACACTGGGGTCTCCATCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 72 bp | TTCAGCAGCATGCGGTGGCACTGGATTGATCCTCAGTaGGACAGAGTTGAAATCGTCACAGCACGAGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSSMRWHWIDPQ*DRVEIVTARGK Trigger: CTTTCCTCGTGCTGTGACGATTTCAACTCTGTCCAACTGAGGATCAATCCAGTGCCACCGCATGCTGCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS TCA 72 bp | TATCTCTCTACCGCTGTAGGCAGGGCCCATTTCACTTaGATTCTTGACTGTTCTGTGCCGAGCAATCTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: YLSTAVGRAHFT*ILDCSVPSNLN Trigger: GTTGAGATTGCTCGGCACAGAACAGTCAAGAATTCAAGTGAAATGGGCCCTGCCTACAGCGGTAGAGAGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CCA 72 bp | AAAAAGGTTTGCACATCTTCTGGCAGATTATGGACCTaGAGAAGAACCCTTTCCCCTTCAGCAGCATGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: KKVCTSSGRLWT*RRTLSPSAACG Trigger: ACCGCATGCTGCTGAAGGGGAAAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CCA 72 bp | GCTCAGAGGATACCTCCATATCTCTTCTCACTGTACTaGCCTTTCTCAGAGGAGAAGAACTTTGCTCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: AQRIPPYLFSLY*PFSEEKNFAPA Trigger: TGCAGGAGCAAAGTTCTTCTCCTCTGAGAAAGGCCAGTACAGTGAGAAGAGATATGGAGGTATCCTCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108481.8 |
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| CDS CAA 72 bp | CTGTCCGTGACTCTCATGACAGGCTGTGTCACAAGCTaGTTCACATTGACTTGCACATGGGCTGTTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LSVTLMTGCVTS*FTLTCTWAVST Trigger: AGTTGAAACAGCCCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCCTGTCATGAGAGTCACGGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 72 bp | GCAGGGCCCATTTCACTTGAATTCTTGACTGTTCTGTaGCGAGCAATCTCAACCTTGTTAAACACAGTCAAC | + |
|
Preference number: 6 (lower is better) Translates to: AGPISLEFLTVL*RAISTLLNTVN Trigger: GTTGACTGTGTTTAACAAGGTTGAGATTGCTCGGCACAGAACAGTCAAGAATTCAAGTGAAATGGGCCCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 72 bp | ATGACAGGCTGTGTCACAAGCTTGTTCACATTGACTTaGACATGGGCTGTTTCAACTTTCACATTGCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: MTGCVTSLFTLT*TWAVSTFTLLS Trigger: CGACAGCAATGTGAAAGTTGAAACAGCCCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCCTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 72 bp | CTGAGTGCTATAGACGCCTTTGTACCACAAAAAGGTTaGCACATCTTCTGGCAGATTATGGACCTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LSAIDAFVPQKG*HIFWQIMDLEK Trigger: CTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTACAAAGGCGTCTATAGCACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 72 bp | CATGACAGGCTGTGTCACAAGCTTGTTCACATTGACTaGCACATGGGCTGTTTCAACTTTCACATTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: HDRLCHKLVHID*HMGCFNFHIAV Trigger: GACAGCAATGTGAAAGTTGAAACAGCCCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCCTGTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 90 bp | GTCACCCCTCTATACCAGACAAAGACTCGAAGATTCTCTGGCAGATaGTCCACTCGTAGAAGAACATTTTCTCCTTCAACCAATTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VTPLYQTKTRRFSGR*STRRRTFSPSTNLG Trigger: ACCCAAATTGGTTGAAGGAGAAAATGTTCTTCTACGAGTGGACAATCTGCCAGAGAATCTTCGAGTCTTTGTCTGGTATAGAGGGGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CCA 72 bp | GGCTGTGTCACAAGCTTGTTCACATTGACTTGCACATaGGCTGTTTCAACTTTCACATTGCTGTCGATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCVTSLFTLTCT*AVSTFTLLSIV Trigger: AACAATCGACAGCAATGTGAAAGTTGAAACAGCCCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 72 bp | GAATTCTTGACTGTTCTGTGCCGAGCAATCTCAACCTaGTTAAACACAGTCAACCCTTTGTACCAGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: EFLTVLCRAIST*LNTVNPLYQRS Trigger: GCTTCTCTGGTACAAAGGGTTGACTGTGTTTAACAAGGTTGAGATTGCTCGGCACAGAACAGTCAAGAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS GCA 72 bp | GGATCCATTGATGAACAATATCTCTCTTCCACTGTGTaGATAGCCATTGATGAGAGACTCTGTCACTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSIDEQYLSSTV*IAIDERLCHYA Trigger: AGCATAGTGACAGAGTCTCTCATCAATGGCTATGCACACAGTGGAAGAGAGATATTGTTCATCAATGGATCC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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| CDS CAA 72 bp | CTATACCAGACAAAGACTCGAAGATTCTCTGGCAGATaGTCCACTCGTAGAAGAACATTTTCTCCTTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: LYQTKTRRFSGR*STRRRTFSPST Trigger: GGTTGAAGGAGAAAATGTTCTTCTACGAGTGGACAATCTGCCAGAGAATCTTCGAGTCTTTGTCTGGTATAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
||
| CDS TCA 72 bp | AAGAGAGGAGTTCACCTGAAGGAATATGGATGTATTTaGTACCACTTTTCCATTTTTACTTATGGTTTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KRGVHLKEYGCI*YHFSIFTYGLK Trigger: CTTCAAACCATAAGTAAAAATGGAAAAGTGGTATCAAATACATCCATATTCCTTCAGGTGAACTCCTCTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000051973.9 ENSMUST00000108481.8 ENSMUST00000208221.2 |
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