Pregenerated sensors for PSG21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070796Ensembl transcript IDs: ENSMUST00000094793.12, ENSMUST00000182128.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGATCAGGTGTGGGGAGGGATAGGAGAAATGGCCAACTGGCCATaGGAAAGAATGGAAATCTGTAACTGGCAGGGGTGGGTAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: QDQVWGGIGEMANWP*ERMEICNWQGWVGV Trigger: CACACCTACCCACCCCTGCCAGTTACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCATTTCTCCTATCCCTCCCCACACCTGATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| 3UTR GCA 90 bp | CACCTGCAATCTAAACTCATAGAGATTTGTTTCCAGGCCTCCTGGTaGTCTGTGTGGGGACTCCACAGCTTCCTCAGCTATGGCTTATCT | + |
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Preference number: 1 (lower is better) Translates to: HLQSKLIEICFQASW*SVWGLHSFLSYGLS Trigger: AGATAAGCCATAGCTGAGGAAGCTGTGGAGTCCCCACACAGAGCACCAGGAGGCCTGGAAACAAATCTCTATGAGTTTAGATTGCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR CCA 90 bp | TGTCACCTGCAATCTAAACTCATAGAGATTTGTTTCCAGGCCTCCTaGTGCTCTGTGTGGGGACTCCACAGCTTCCTCAGCTATGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: CHLQSKLIEICFQAS*CSVWGLHSFLSYGL Trigger: TAAGCCATAGCTGAGGAAGCTGTGGAGTCCCCACACAGAGCACCAGGAGGCCTGGAAACAAATCTCTATGAGTTTAGATTGCAGGTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR CCA 90 bp | TCTAAACTCATAGAGATTTGTTTCCAGGCCTCCTGGTGCTCTGTGTaGGGACTCCACAGCTTCCTCAGCTATGGCTTATCTGACACACAT | + |
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Preference number: 1 (lower is better) Translates to: SKLIEICFQASWCSV*GLHSFLSYGLSDTH Trigger: ATGTGTGTCAGATAAGCCATAGCTGAGGAAGCTGTGGAGTCCCCACACAGAGCACCAGGAGGCCTGGAAACAAATCTCTATGAGTTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR GCA 90 bp | GTGTACTGGATGGTGACACATGCCATGACAGACTTGTACCATATCTaGTCTAACAGGAATCCAAAGCCAACCAATAACATAAATGTTCCC | + |
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Preference number: 1 (lower is better) Translates to: VYWMVTHAMTDLYHI*SNRNPKPTNNINVP Trigger: GGGAACATTTATGTTATTGGTTGGCTTTGGATTCCTGTTAGAGCAGATATGGTACAAGTCTGTCATGGCATGTGTCACCATCCAGTACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGTTAAACAATTTGGAAGGCCAAATGGCCAACTGGCCATaGGAAAGAATGGAAATCTGT | + |
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Preference number: 2 (lower is better) Translates to: IHTLHCTDPKKLNNLEGQMANWP*ERMEIC Trigger: ACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCAT...TTGGCCTTCCAAATTGTTTAACTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| 3UTR TCA 72 bp | GTGTGGGGAGGGATAGGAGAAATGGCCAACTGGCCATaGGAAAGAATGGAAATCTGTAACTGGCAGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: VWGGIGEMANWP*ERMEICNWQGW Trigger: CCACCCCTGCCAGTTACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCATTTCTCCTATCCCTCCCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| 3UTR CCA 72 bp | CAATCTAAACTCATAGAGATTTGTTTCCAGGCCTCCTaGTGCTCTGTGTGGGGACTCCACAGCTTCCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: QSKLIEICFQAS*CSVWGLHSFLS Trigger: GCTGAGGAAGCTGTGGAGTCCCCACACAGAGCACCAGGAGGCCTGGAAACAAATCTCTATGAGTTTAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR GCA 72 bp | TCTAAACTCATAGAGATTTGTTTCCAGGCCTCCTGGTaGTCTGTGTGGGGACTCCACAGCTTCCTCAGCTAT | + |
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Preference number: 3 (lower is better) Translates to: SKLIEICFQASW*SVWGLHSFLSY Trigger: ATAGCTGAGGAAGCTGTGGAGTCCCCACACAGAGCACCAGGAGGCCTGGAAACAAATCTCTATGAGTTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR CCA 72 bp | CTGGAACCCAGATTGTCCTCTCCATCAATGCATTCTTaGATGTGTCTCTGTGGAAGATGTCCAGGGGAACTA | + |
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Preference number: 3 (lower is better) Translates to: LEPRLSSPSMHS*MCLCGRCPGEL Trigger: TAGTTCCCCTGGACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATCTGGGTTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR GCA 72 bp | TTAATGCCCTGGAACCCAGATTGTCCTCTCCATCAATaGATTCTTGGATGTGTCTCTGTGGAAGATGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LMPWNPDCPLHQ*ILGCVSVEDVQ Trigger: CTGGACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATCTGGGTTCCAGGGCATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR CCA 72 bp | GTCCTCTCCATCAATGCATTCTTGGATGTGTCTCTGTaGAAGATGTCCAGGGGAACTATCATAACTGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: VLSINAFLDVSL*KMSRGTIITVA Trigger: AGCCACAGTTATGATAGTTCCCCTGGACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGATTGTCCTCTCCATCAATGCATTCTTGGATGTGTCTCTGTGGAAGATGTCATGCCATGACAGACTaGTACCATATCTGCTCTAAC | + |
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Preference number: 3 (lower is better) Translates to: PRLSSPSMHSWMCLCGRCHAMTD*YHICSN Trigger: GTTAGAGCAGATATGGTACAAGTCTGTCATGGCATG...ACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR GCA 72 bp | ATGGTGACACATGCCATGACAGACTTGTACCATATCTaGTCTAACAGGAATCCAAAGCCAACCAATAACATA | + |
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Preference number: 3 (lower is better) Translates to: MVTHAMTDLYHI*SNRNPKPTNNI Trigger: TATGTTATTGGTTGGCTTTGGATTCCTGTTAGAGCAGATATGGTACAAGTCTGTCATGGCATGTGTCACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | CTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGTCCCTGCCCTGCAACTACGTGTTTTGGTaGCTGGATGGTGACACTAGC | + |
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Preference number: 4 (lower is better) Translates to: LAGVGRCGHLNTEMSLPCNYVFW*LDGDTS Trigger: GCTAGTGTCACCATCCAGTCACCAAAACACGTAGTT...GCAGGGCAGGGACATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | AGGACCTGTGTCAATTGTCCATCACCTTTGAGACCCTGGCCTTCCTACGACATCAAGGACGCCCACAGGTaGAATGAGAGGAGTAGACCT | + |
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Preference number: 4 (lower is better) Translates to: RTCVNCPSPLRPWPSYDIKDAHR*NERSRP Trigger: AGGTCTACTCCTCTCATTTCACCTGTGGGCGTCCTT...GATGTCGTAGGAAGGCCAGGGTCTCAAAGGTGATGGACAATTGACACAGGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR GCA 90 bp | AAATGGCCAACTGGCCATGAGAAAGAATGGAAATCTGTAACTGGCAGGGGTGGGTCCCCTTCAGCAGCATaGGGAGTCACTGGATCGATC | + |
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Preference number: 4 (lower is better) Translates to: KWPTGHEKEWKSVTGRGGSPSAA*GVTGSI Trigger: GATCGATCCAGTGACTCCGCATGCTGCTGAAGGGGA...CCCACCCCTGCCAGTTACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | GTGTGGGGACTCCACAGCTTCCTCAGCTATGGCTTATCTGACACACATGGAGTCAACTACGTGTTTTGGTaGCTGGATGGTGACACTAGC | + |
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Preference number: 4 (lower is better) Translates to: VWGLHSFLSYGLSDTHGVNYVFW*LDGDTS Trigger: GCTAGTGTCACCATCCAGTCACCAAAACACGTAGTT...GACTCCATGTGTGTCAGATAAGCCATAGCTGAGGAAGCTGTGGAGTCCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGTCCCCTGTGTCCTCCTGGGTaGCATTTTGGATCCATAGGG | + |
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Preference number: 4 (lower is better) Translates to: ICNWQGWVGVDISIQKCPLCPPG*HFGSIG Trigger: CCCTATGGATCCAAAATGTCACCCAGGAGGACACAG...GGGACATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| 3UTR CAA 72 bp | CAGAGAAAGAACACCTGCCAGAAGGACCTGTGTCAATaGTCCATCACCTTTGAGACCCTGGCCTTCCTACGA | + |
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Preference number: 4 (lower is better) Translates to: QRKNTCQKDLCQ*SITFETLAFLR Trigger: TCGTAGGAAGGCCAGGGTCTCAAAGGTGATGGACAATTGACACAGGTCCTTCTGGCAGGTGTTCTTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| 3UTR CAA 72 bp | CCTGGAACCCAGATTGTCCTCTCCATCAATGCATTCTaGGATGTGTCTCTGTGGAAGATGTCCAGGGGAACT | + |
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Preference number: 4 (lower is better) Translates to: PGTQIVLSINAF*DVSLWKMSRGT Trigger: AGTTCCCCTGGACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATCTGGGTTCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | AAATGGCCAACTGGCCATGAGAAAGAATGGAAATCTGTAACTGGCAGGGGTGGGTACTCTGGAAGATTGTaGACACGGAGAAGAACGCGT | + |
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Preference number: 4 (lower is better) Translates to: KWPTGHEKEWKSVTGRGGYSGRL*TRRRTR Trigger: ACGCGTTCTTCTCCGTGTTCACAATCTTCCAGAGTA...CCCACCCCTGCCAGTTACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | GGGGACTCCACAGCTTCCTCAGCTATGGCTTATCTGACACACATGGAGTCTATATACTCTGGAAGATTGTaGACACGGAGAAGAACGCGT | + |
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Preference number: 4 (lower is better) Translates to: GDSTASSAMAYLTHMESIYSGRL*TRRRTR Trigger: ACGCGTTCTTCTCCGTGTTCACAATCTTCCAGAGTA...TATAGACTCCATGTGTGTCAGATAAGCCATAGCTGAGGAAGCTGTGGAGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | AATAAGTGGAAGCAGATGGAAGGAGGGAATTGGGTAGGAGAGGGGATGTGGGAGGATCGCTTAAATTCTTaGGTGTTCTGTGCCGGACAA | + |
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Preference number: 4 (lower is better) Translates to: NKWKQMEGGNWVGEGMWEDRLNS*VFCAGQ Trigger: TTGTCCGGCACAGAACACTCAAGAATTTAAGCGATC...CTCCCACATCCCCTCTCCTACCCAATTCCCTCCTTCCATCTGCTTCCACTTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | AAATGGCCAACTGGCCATGAGAAAGAATGGAAATCTGTAACTGGCAGGGGTGGGAATGCAGAGCAATTGTaGGCCTCCAATTTATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KWPTGHEKEWKSVTGRGGNAEQL*ASNLSV Trigger: GACTGATAAATTGGAGGCTCACAATTGCTCTGCATT...CCCACCCCTGCCAGTTACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | AATAAGTGGAAGCAGATGGAAGGAGGGAATTGGGTAGGAGAGGGGATGTGGGAGAAATGTGGACGTATTTaGTTCCAGTTCTCCATGGTT | + |
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Preference number: 4 (lower is better) Translates to: NKWKQMEGGNWVGEGMWEKCGRI*FQFSMV Trigger: AACCATGGAGAACTGGAATCAAATACGTCCACATTT...CTCCCACATCCCCTCTCCTACCCAATTCCCTCCTTCCATCTGCTTCCACTTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGTTAAACAATTTGGAAGGCCAAGGGTCATCCTCTCTGTaGGCTGCAGACTCTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: IHTLHCTDPKKLNNLEGQGSSSL*AADSDC Trigger: ACAATCAGAGTCTGCAGCTCACAGAGAGGATGACCC...TTGGCCTTCCAAATTGTTTAACTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR GCA 90 bp | GGTAGGTGTGGACATCTCAATACAGAAATGTCCCTGCCCTGCTATAGCATGAGAGCCCTGTCATACTTGTaGTATAGTCCAGAAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: GRCGHLNTEMSLPCYSMRALSYL*YSPENA Trigger: TGCATTTTCTGGACTATAGCACAAGTATGACAGGGC...TCTCATGCTATAGCAGGGCAGGGACATTTCTGTATTGAGATGTCCACACCTACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| 3UTR CAA 72 bp | ACAGTGTACTGGATGGTGACACATGCCATGACAGACTaGTACCATATCTGCTCTAACAGGAATCCAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVYWMVTHAMTD*YHICSNRNPKP Trigger: TGGCTTTGGATTCCTGTTAGAGCAGATATGGTACAAGTCTGTCATGGCATGTGTCACCATCCAGTACACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | CCCAGATTGTCCTCTCCATCAATGCATTCTTGGATGTGTCTCTGTGGAAGATGTAATGCAGAGCAATTGTaGGCCTCCAATTTATCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PRLSSPSMHSWMCLCGRCNAEQL*ASNLSV Trigger: GACTGATAAATTGGAGGCTCACAATTGCTCTGCATT...ACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATCTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | ATTGTTAACCTGCAGGAGAGAAATGCAGGAGATACACAACAGAGAAAGAACACCGATCGCTTAAATTCTTaGGTGTTCTGTGCCGGACAA | + |
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Preference number: 4 (lower is better) Translates to: IVNLQERNAGDTQQRKNTDRLNS*VFCAGQ Trigger: TTGTCCGGCACAGAACACTCAAGAATTTAAGCGATC...GGTGTTCTTTCTCTGTTGTGTATCTCCTGCATTTCTCTCCTGCAGGTTAACAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CCA 90 bp | ATCAATGCATTCTTGGATGTGTCTCTGTGGAAGATGTCCAGGGGAACTATCATATATCCTGTGTCCTCCTaGGTGACATTTTGGATCCAT | + |
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Preference number: 4 (lower is better) Translates to: INAFLDVSLWKMSRGTIIYPVSS*VTFWIH Trigger: ATGGATCCAAAATGTCACCCAGGAGGACACAGGATA...TATGATAGTTCCCCTGGACATCTTCCACAGAGACACATCCAAGAATGCATTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | TCAGCTATGGCTTATCTGACACACATGGAGTCTATATCAGAGATATGGGCATGGAAATGTGGACGTATTTaGTTCCAGTTCTCCATGGTT | + |
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Preference number: 4 (lower is better) Translates to: SAMAYLTHMESISEIWAWKCGRI*FQFSMV Trigger: AACCATGGAGAACTGGAATCAAATACGTCCACATTT...CCATGCCCATATCTCTGATATAGACTCCATGTGTGTCAGATAAGCCATAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR TCA 90 bp | AAGAAGTTAAACAATTTGGAAGGCCAAGGGTGTATGCTTGAATCTAAAGTAGAAAAGGACGCCCACAGGTaGAATGAGAGGAGTAGACCT | + |
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Preference number: 4 (lower is better) Translates to: KKLNNLEGQGCMLESKVEKDAHR*NERSRP Trigger: AGGTCTACTCCTCTCATTTCACCTGTGGGCGTCCTT...TTCTACTTTAGATTCAAGCATACACCCTTGGCCTTCCAAATTGTTTAACTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR GCA 90 bp | GACTTGTACCATATCTGCTCTAACAGGAATCCAAAGCCAACCAATAACATAAATGTGAACAGGACCCTCTaGCAAGGGATAAGGACATTG | + |
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Preference number: 4 (lower is better) Translates to: DLYHICSNRNPKPTNNINVNRTL*QGIRTL Trigger: CAATGTCCTTATCCCTTGGCAGAGGGTCCTGTTCAC...ATTTATGTTATTGGTTGGCTTTGGATTCCTGTTAGAGCAGATATGGTACAAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR GCA 90 bp | ATTGTTAACCTGCAGGAGAGAAATGCAGGAGATACACAACAGAGAAAGAACACCGCCCTGTCATACTTGTaGTATAGTCCAGAAAATGCA | + |
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Preference number: 4 (lower is better) Translates to: IVNLQERNAGDTQQRKNTALSYL*YSPENA Trigger: TGCATTTTCTGGACTATAGCACAAGTATGACAGGGC...GGTGTTCTTTCTCTGTTGTGTATCTCCTGCATTTCTCTCCTGCAGGTTAACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CCA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGTTAAACAATTTGGAAGGCCAATATCCTGTGTCCTCCTaGGTGACATTTTGGATCCAT | + |
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Preference number: 4 (lower is better) Translates to: IHTLHCTDPKKLNNLEGQYPVSS*VTFWIH Trigger: ATGGATCCAAAATGTCACCCAGGAGGACACAGGATA...TTGGCCTTCCAAATTGTTTAACTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR TCA 90 bp | GAAGTAATCCAGTACCAAGATAGCATGCATGGTATGTATTCACTTATAAGTAGAGCAGACTCTGATTGTTaGAGAGCCAACGGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: EVIQYQDSMHGMYSLISRADSDC*RANGWR Trigger: TCTCCATCCGTTGGCTCTTCAACAATCAGAGTCTGC...TCTACTTATAAGTGAATACATACCATGCATGCTATCTTGGTACTGGATTACTTC 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR GCA 90 bp | AAGAAGTTAAACAATTTGGAAGGCCAAGGGTGTATGCTTGAATCTAAAGTAGAAGTGAACAGGACCCTCTaGCAAGGGATAAGGACATTG | + |
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Preference number: 4 (lower is better) Translates to: KKLNNLEGQGCMLESKVEVNRTL*QGIRTL Trigger: CAATGTCCTTATCCCTTGGCAGAGGGTCCTGTTCAC...TTCTACTTTAGATTCAAGCATACACCCTTGGCCTTCCAAATTGTTTAACTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS TCA 90 bp | AACACGGAGAAGAACGCGTCCTCCTTCAGCAACTCTGGGCGGCACTaGTTCAATAGTGAGCTTGGCAGGGAAGGAAGGACGCCCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: NTEKNASSFSNSGRH*FNSELGREGRTPTG Trigger: ACCTGTGGGCGTCCTTCCTTCCCTGCCAAGCTCACTATTGAATCAGTGCCGCCCAGAGTTGCTGAAGGAGGACGCGTTCTTCTCCGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGACTCCACAGCTTCCTCAGCTATGGCTTATCTGACACACATGGAGTCGTGCTATCCACACCCTaGTACCAGGAAAAGGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: VWGLHSFLSYGLSDTHGVVLSTP*YQEKVC Trigger: GCAAACCTTTTCCTGGTACAAGGGTGTGGATAGCAC...GACTCCATGTGTGTCAGATAAGCCATAGCTGAGGAAGCTGTGGAGTCCCCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | GTGTGGGGACTCCACAGCTTCCTCAGCTATGGCTTATCTGACACACATGGAGTCGGATCGCTTAAATTCTaGAGTGTTCTGTGCCGGACA | + |
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Preference number: 5 (lower is better) Translates to: VWGLHSFLSYGLSDTHGVGSLKF*SVLCRT Trigger: TGTCCGGCACAGAACACTCAAGAATTTAAGCGATCC...GACTCCATGTGTGTCAGATAAGCCATAGCTGAGGAAGCTGTGGAGTCCCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | TTTCCAGGCCTCCTGGTGCTCTGTGTGGGGACTCCACAGCTTCCTCAGCTATGGACTGTAGATGTTGACTaGAACATGCACTGTTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: FPGLLVLCVGTPQLPQLWTVDVD*NMHCFN Trigger: GTTGAAACAGTGCATGTTCAAGTCAACATCTACAGT...CCATAGCTGAGGAAGCTGTGGAGTCCCCACACAGAGCACCAGGAGGCCTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS TCA 90 bp | TCCAGCATCCTCCTTCCTCACAGTATGTATCCTGAGTTGGCATTTTaGTGGGGACAGGGTCATCCTCTCTGTGAGCTGCAGACTCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SSILLPHSMYPELAF*WGQGHPLCELQTLI Trigger: AATCAGAGTCTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR CAA 90 bp | AAATGGCCAACTGGCCATGAGAAAGAATGGAAATCTGTAACTGGCAGGGGTGGGGGATCGCTTAAATTCTaGAGTGTTCTGTGCCGGACA | + |
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Preference number: 5 (lower is better) Translates to: KWPTGHEKEWKSVTGRGGGSLKF*SVLCRT Trigger: TGTCCGGCACAGAACACTCAAGAATTTAAGCGATCC...CCCACCCCTGCCAGTTACAGATTTCCATTCTTTCTCATGGCCAGTTGGCCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS CCA 90 bp | TTGTACCAGGAAAAGGTTTGCAGATCTTCTGGTAGATTATGGACCTaGAGAAGAACACTTTCCCCTTCAGCAGCATGCGGAGTCACTGGA | + |
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Preference number: 5 (lower is better) Translates to: LYQEKVCRSSGRLWT*RRTLSPSAACGVTG Trigger: TCCAGTGACTCCGCATGCTGCTGAAGGGGAAAGTGTTCTTCTCCAGGTCCATAATCTACCAGAAGATCTGCAAACCTTTTCCTGGTACAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGTCCCCAAGGGATAAGGACATaGGTGAAAAGTTCAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: ICNWQGWVGVDISIQKCPQGIRT*VKSSEV Trigger: GACCTCTGAACTTTTCACCAATGTCCTTATCCCTTG...GGGACATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR CAA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGTCCCGAAATGTGGACGTATTaGATTCCAGTTCTCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: ICNWQGWVGVDISIQKCPEMWTY*IPVLHG Trigger: ACCATGGAGAACTGGAATCAAATACGTCCACATTTC...GGGACATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR CAA 90 bp | CCCAGATTGTCCTCTCCATCAATGCATTCTTGGATGTGTCTCTGTGGAAGATGTCAAGGGATAAGGACATaGGTGAAAAGTTCAGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: PRLSSPSMHSWMCLCGRCQGIRT*VKSSEV Trigger: GACCTCTGAACTTTTCACCAATGTCCTTATCCCTTG...ACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | ATTCACACACTACACTGCACTGACCCAAAGAAGTTAAACAATTTGGAAGGCCAAGATTCAATAGTGAGCTaGGCAGGGAAGGAAGGACGC | + |
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Preference number: 5 (lower is better) Translates to: IHTLHCTDPKKLNNLEGQDSIVS*AGKEGR Trigger: GCGTCCTTCCTTCCCTGCCAAGCTCACTATTGAATC...TTGGCCTTCCAAATTGTTTAACTTCTTTGGGTCAGTGCAGTGTAGTGTGTGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR CAA 90 bp | AATAAGTGGAAGCAGATGGAAGGAGGGAATTGGGTAGGAGAGGGGATGTGGGAGGCTATATTCTACAATTaGAAAGGATGGAGTGCTATC | + |
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Preference number: 5 (lower is better) Translates to: NKWKQMEGGNWVGEGMWEAIFYN*KGWSAI Trigger: GATAGCACTCCATCCTTTCAAATTGTAGAATATAGC...CTCCCACATCCCCTCTCCTACCCAATTCCCTCCTTCCATCTGCTTCCACTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR CAA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGTCCCCTTGTAGATGTTGACTaGAACATGCACTGTTTCAAC | + |
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Preference number: 5 (lower is better) Translates to: ICNWQGWVGVDISIQKCPLVDVD*NMHCFN Trigger: GTTGAAACAGTGCATGTTCAAGTCAACATCTACAAG...GGGACATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS-3UTR CAA 90 bp | GATTGTCCTCTCCATCAATGCATTCTTGGATGTGTCTCTGTGGAAGATGTCCAGGAAATGTGGACGTATTaGATTCCAGTTCTCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: DCPLHQCILGCVSVEDVQEMWTY*IPVLHG Trigger: ACCATGGAGAACTGGAATCAAATACGTCCACATTTC...CTGGACATCTTCCACAGAGACACATCCAAGAATGCATTGATGGAGAGGACAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | TCTAAACTCATAGAGATTTGTTTCCAGGCCTCCTGGTGCTCTGTGTGGGGACTCGCTATATTCTACAATTaGAAAGGATGGAGTGCTATC | + |
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Preference number: 5 (lower is better) Translates to: SKLIEICFQASWCSVWGLAIFYN*KGWSAI Trigger: GATAGCACTCCATCCTTTCAAATTGTAGAATATAGC...GAGTCCCCACACAGAGCACCAGGAGGCCTGGAAACAAATCTCTATGAGTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182128.2 |
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| CDS-3UTR CAA 90 bp | AAGAAGTTAAACAATTTGGAAGGCCAAGGGTGTATGCTTGAATCTAAAGTAGAAGTGCTATCCACACCCTaGTACCAGGAAAAGGTTTGC | + |
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Preference number: 5 (lower is better) Translates to: KKLNNLEGQGCMLESKVEVLSTP*YQEKVC Trigger: GCAAACCTTTTCCTGGTACAAGGGTGTGGATAGCAC...TTCTACTTTAGATTCAAGCATACACCCTTGGCCTTCCAAATTGTTTAACTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS CCA 72 bp | TCAGCAGCATGCGGAGTCACTGGATCGATCCTGAGTTaGGCAGAGTCAAGAGGGTCACAGCACGGGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SAACGVTGSILS*AESRGSQHGVS Trigger: GGAGACCCCGTGCTGTGACCCTCTTGACTCTGCCCAACTCAGGATCGATCCAGTGACTCCGCATGCTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS TCA 72 bp | GGGGACAGGGTCATCCTCTCTGTGAGCTGCAGACTCTaGTTGTTGAAGAGCCAACGGATGGAGACCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GDRVILSVSCRL*LLKSQRMETPV Trigger: CACTGGGGTCTCCATCCGTTGGCTCTTCAACAATCAGAGTCTGCAGCTCACAGAGAGGATGACCCTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS TCA 72 bp | AAGAACGCGTCCTCCTTCAGCAACTCTGGGCGGCACTaGTTCAATAGTGAGCTTGGCAGGGAAGGAAGGACG | + |
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Preference number: 6 (lower is better) Translates to: KNASSFSNSGRH*FNSELGREGRT Trigger: CGTCCTTCCTTCCCTGCCAAGCTCACTATTGAATCAGTGCCGCCCAGAGTTGCTGAAGGAGGACGCGTTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS TCA 72 bp | CTCCTTCCTCACAGTATGTATCCTGAGTTGGCATTTTaGTGGGGACAGGGTCATCCTCTCTGTGAGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: LLPHSMYPELAF*WGQGHPLCELQ Trigger: CTGCAGCTCACAGAGAGGATGACCCTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS CCA 72 bp | CCAGCATCCTCCTTCCTCACAGTATGTATCCTGAGTTaGCATTTTGATGGGGACAGGGTCATCCTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PASSFLTVCILS*HFDGDRVILSV Trigger: CACAGAGAGGATGACCCTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS TCA 72 bp | ACTCTCCAGCATCCTCCTTCCTCACAGTATGTATCCTaGGTTGGCATTTTGATGGGGACAGGGTCATCCTCT | + |
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Preference number: 6 (lower is better) Translates to: TLQHPPSSQYVS*VGILMGTGSSS Trigger: AGAGGATGACCCTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094793.12 |
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| CDS CCA 72 bp | AGGGATCCATTGCTGAACACTATCTCTCTACCGCTGTaGGCAGGGCCTGGATCGCTTAAATTCTTGAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: RDPLLNTISLPL*AGPGSLKFLSV Trigger: AACACTCAAGAATTTAAGCGATCCAGGCCCTGCCCACAGCGGTAGAGAGATAGTGTTCAGCAATGGATCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS CCA 72 bp | GAAAAGGTTTGCAGATCTTCTGGTAGATTATGGACCTaGAGAAGAACACTTTCCCCTTCAGCAGCATGCGGA | + |
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Preference number: 6 (lower is better) Translates to: EKVCRSSGRLWT*RRTLSPSAACG Trigger: TCCGCATGCTGCTGAAGGGGAAAGTGTTCTTCTCCAGGTCCATAATCTACCAGAAGATCTGCAAACCTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS TCA 72 bp | TGGTTTGAAAAATGTAATATCCTGTGTCCTCCTGGGTaGCATTTTGGATCCATAGGGACCCGTTGCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: WFEKCNILCPPG*HFGSIGTRCCT Trigger: TGTACAGCAACGGGTCCCTATGGATCCAAAATGTCACCCAGGAGGACACAGGATATTACATTTTTCAAACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS CAA 90 bp | ACTGCCGCTGATGATGGACTTCATTGCTTTGCTATATTCTACAATTaGAAAGGATGGAGTGCTATCCACACCCTTGTACCAGGAAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: TAADDGLHCFAIFYN*KGWSAIHTLVPGKG Trigger: ACCTTTTCCTGGTACAAGGGTGTGGATAGCACTCCATCCTTTCAAATTGTAGAATATAGCAAAGCAATGAAGTCCATCATCAGCGGCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS CAA 90 bp | ATCAGTCCTCTGTACCAGGCAAAAGCTAGAAGATTCTCTGGCAGATaGTCAACTTGTAGAAGAATATTCTCTCCTTCAACTACGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: ISPLYQAKARRFSGR*STCRRIFSPSTTCF Trigger: AAAACACGTAGTTGAAGGAGAGAATATTCTTCTACAAGTTGACAATCTGCCAGAGAATCTTCTAGCTTTTGCCTGGTACAGAGGACTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS CAA 72 bp | GATGATGGACTTCATTGCTTTGCTATATTCTACAATTaGAAAGGATGGAGTGCTATCCACACCCTTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: DDGLHCFAIFYN*KGWSAIHTLVP Trigger: TGGTACAAGGGTGTGGATAGCACTCCATCCTTTCAAATTGTAGAATATAGCAAAGCAATGAAGTCCATCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS CAA 72 bp | GAACATGCACTGTTTCAACTCTCATATTGCTGTCTATaGTTACTAGTGTGTACAAGCCAGAGTCTTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: EHALFQLSYCCL*LLVCTSQSLSQ Trigger: CTGAGAAAGACTCTGGCTTGTACACACTAGTAACAATAGACAGCAATATGAGAGTTGAAACAGTGCATGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS TCA 72 bp | ATGAGAGGAGTAGACCTGAAGAAATGTGGACGTATTTaGTTCCAGTTCTCCATGGTTACTTATGGTTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: MRGVDLKKCGRI*FQFSMVTYGLK Trigger: TTTCAAACCATAAGTAACCATGGAGAACTGGAATCAAATACGTCCACATTTCTTCAGGTCTACTCCTCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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| CDS CAA 72 bp | AATGAGAGGAGTAGACCTGAAGAAATGTGGACGTATTaGATTCCAGTTCTCCATGGTTACTTATGGTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: NERSRPEEMWTY*IPVLHGYLWFE Trigger: TTCAAACCATAAGTAACCATGGAGAACTGGAATCAAATACGTCCACATTTCTTCAGGTCTACTCCTCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094793.12 ENSMUST00000182128.2 |
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