Pregenerated sensors for PSG19 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004542Ensembl transcript IDs: ENSMUST00000004657.14, ENSMUST00000182853.2
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CACTACACAGATCCAAAGATGCTAAACAAGATGGAAGGCCAAGGGAGCATGCTTCATCAGAATCAGGTGTaGGGAGGGATGGGAGAGATC | + |
|
Preference number: 2 (lower is better) Translates to: HYTDPKMLNKMEGQGSMLHQNQV*GGMGEI Trigger: GATCTCTCCCATCCCTCCCCACACCTGATTCTGATG...AAGCATGCTCCCTTGGCCTTCCATCTTGTTTAGCATCTTTGGATCTGTGTAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| 3UTR-3UTR CCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTCATCAGAATCAGGTGTaGGGAGGGATGGGAGAGATC | + |
|
Preference number: 2 (lower is better) Translates to: SHIKGRKIVVGSRWREGTHQNQV*GGMGEI Trigger: GATCTCTCCCATCCCTCCCCACACCTGATTCTGATG...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTATCTCAATACAGAAATaGCCCCACCCTGATATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SHIKGRKIVVGSRWREGTISIQK*PHPDIA Trigger: TGCTATATCAGGGTGGGGGCATTTCTGTATTGAGAT...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAATCTCAATACAGAAATaGCCCCACCCTGATATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIISIQK*PHPDIA Trigger: TGCTATATCAGGGTGGGGGCATTTCTGTATTGAGAT...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCCAGAGTCTTTCTCAGTaGCATCCTGGAGGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ICNWQGWVGVDISIQKCPQSLSQ*HPGGAG Trigger: CCCTGCTCCTCCAGGATGTCACTGAGAAAGACTCTG...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCGTGAGCTGCAGACGCTaGTTGTTGAAGAGCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ICNWQGWVGVDISIQKCPVSCRR*LLKSQR Trigger: CCGTTGGCTCTTCAACAATCAGCGTCTGCAGCTCAC...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCTCATCACAGCCAGGCTaGCTGGGAGACTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ICNWQGWVGVDISIQKCPSSQPG*LGDWSL Trigger: CAAAGACCAGTCTCCCAGTCAGCCTGGCTGTGATGA...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAATTAAGAGGGAGGCTGTaGGCAGAACCCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RCGEGWERSTTVHMNEWKLRGRL*AEPSAR Trigger: CCTGGCAGAGGGTTCTGCTCACAGCCTCCCTCTTAA...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGATTAAGAGGGAGGCTGTaGGCAGAACCCTCTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSQNGMQGIYSLISGLRGRL*AEPSAR Trigger: CCTGGCAGAGGGTTCTGCTCACAGCCTCCCTCTTAA...TCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTCGATGTCCTTCCAGGTaGCATTCTGGAGCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHIKGRKIVVGSRWREGTRCPSR*HSGAAG Trigger: CCCTGCTGCTCCAGAATGTCACCTGGAAGGACATCG...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAGAACTGTGCTATCTGTaGCTCTCATGGCAGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RCGEGWERSTTVHMNEWKELCYL*LSWQAV Trigger: CACAGCCTGCCATGAGAGTCACAGATAGCACAGTTC...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCTTCGACCAATTTGGGTaGTACGGATTCGATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ICNWQGWVGVDISIQKCPFDQFG*YGFDGD Trigger: GTCACCATCGAATCCGTACCACCCAAATTGGTCGAA...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTCTGTGTCTTCCCGGGTaGCACTTTGGATCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGLCLPG*HFGSTG Trigger: CCCTGTGGATCCAAAGTGCCACCCGGGAAGACACAG...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | ACACTACACTACACAGATCCAAAGATGCTAAACAAGATGGAAGGCCAAGGGAGCAACGCTGGCTGGCACTaGTTCAATAGTGAGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TLHYTDPKMLNKMEGQGSNAGWH*FNSEEC Trigger: GCACTCCTCACTATTGAATCAGTGCCAGCCAGCGTT...GCTCCCTTGGCCTTCCATCTTGTTTAGCATCTTTGGATCTGTGTAGTGTAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTCAGAGTCTTTCTCAGTaGCATCCTGGAGGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGQSLSQ*HPGGAG Trigger: CCCTGCTCCTCCAGGATGTCACTGAGAAAGACTCTG...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTGTGAGCTGCAGACGCTaGTTGTTGAAGAGCCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: SHIKGRKIVVGSRWREGTVSCRR*LLKSQR Trigger: CCGTTGGCTCTTCAACAATCAGCGTCTGCAGCTCAC...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGATCATCACAGCCAGGCTaGCTGGGAGACTGGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSQNGMQGIYSLISGSSQPG*LGDWSL Trigger: CAAAGACCAGTCTCCCAGTCAGCCTGGCTGTGATGA...TCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR CCA 90 bp | GTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGACATCTGTGTCTTCCCGGGTaGCACTTTGGATCCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTQSQNGMQGIYSLISGHLCLPG*HFGSTG Trigger: CCCTGTGGATCCAAAGTGCCACCCGGGAAGACACAG...ATGTCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTGCAGACGCTGATTGTTaGAGAGCCAACGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHIKGRKIVVGSRWREGTADADC*RANGWR Trigger: TCTCCATCCGTTGGCTCTTCAACAATCAGCGTCTGC...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTGCAGACGCTGATTGTTaGAGAGCCAACGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGADADC*RANGWR Trigger: TCTCCATCCGTTGGCTCTTCAACAATCAGCGTCTGC...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTGTGTCATCCTCTCTGTaGGCTGCAGACGCTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SHIKGRKIVVGSRWREGTVSSSL*AADADC Trigger: ACAATCAGCGTCTGCAGCTCACAGAGAGGATGACAC...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR GCA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTAGGGACCCGTTGCTGTaGAATGTCTCTCTACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGRDPLL*NVSLPL Trigger: CAGTGGTAGAGAGACATTGCACAGCAACGGGTCCCT...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAGGCAGATTATGGACCTaGAGAAGAACACTTTCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RCGEGWERSTTVHMNEWKGRLWT*RRTLSP Trigger: AGGGGAAAGTGTTCTTCTCCAGGTCCATAATCTGCC...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | ACACTACACTACACAGATCCAAAGATGCTAAACAAGATGGAAGGCCAAGGGAGCTTCTCAGTGACATCCTaGAGGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: TLHYTDPKMLNKMEGQGSFSVTS*RSRDPL Trigger: CAATGGATCCCTGCTCCTCCAGGATGTCACTGAGAA...GCTCCCTTGGCCTTCCATCTTGTTTAGCATCTTTGGATCTGTGTAGTGTAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAAGGGCGCCCACAGATaGAAAGAGAGGAGTACACCT | + |
|
Preference number: 4 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIKGAHR*KERSTP Trigger: AGGTGTACTCCTCTCTTTTCATCTGTGGGCGCCCTT...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAGTGTCATCCTCTCTGTaGGCTGCAGACGCTGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIVSSSL*AADADC Trigger: ACAATCAGCGTCTGCAGCTCACAGAGAGGATGACAC...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR TCA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAAGGGAGGAGTACACCTaGAGGAACATGGATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: RCGEGWERSTTVHMNEWKREEYT*RNMDVF Trigger: AAATACATCCATGTTCCTTCAGGTGTACTCCTCCCT...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182853.2 |
||
| CDS-3UTR GCA 90 bp | GAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGAGTCTCTCTACCACTGTaGTCAGGTCCTGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSQNGMQGIYSLISGVSLPL*SGPVTL Trigger: AAGTGTGACAGGACCTGAGCACAGTGGTAGAGAGAC...TCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTGTCTCTCTACCACTGTaGTCAGGTCCTGTCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHIKGRKIVVGSRWREGTVSLPL*SGPVTL Trigger: AAGTGTGACAGGACCTGAGCACAGTGGTAGAGAGAC...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGGGACCCGTTGCTGTaGAATGTCTCTCTACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIRDPLL*NVSLPL Trigger: CAGTGGTAGAGAGACATTGCACAGCAACGGGTCCCT...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCTTGTTCACATTGACTTaGACATGCGCTGTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ICNWQGWVGVDISIQKCPLFTLT*TCAVST Trigger: AGTTGAAACAGCGCATGTGCAAGTCAATGTGAACAA...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | CACTACACAGATCCAAAGATGCTAAACAAGATGGAAGGCCAAGGGAGCATGCTTTTCGACCAATTTGGGTaGTACGGATTCGATGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HYTDPKMLNKMEGQGSMLFDQFG*YGFDGD Trigger: GTCACCATCGAATCCGTACCACCCAAATTGGTCGAA...AAGCATGCTCCCTTGGCCTTCCATCTTGTTTAGCATCTTTGGATCTGTGTAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR CCA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTTTCTCAGTGACATCCTaGAGGAGCAGGGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: SHIKGRKIVVGSRWREGTFSVTS*RSRDPL Trigger: CAATGGATCCCTGCTCCTCCAGGATGTCACTGAGAA...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | GAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGAAGGGCCCATTTCAATTaGATTCTTGGCGGTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EVTQSQNGMQGIYSLISGRAHFN*ILGGSV Trigger: CACAGAACCGCCAAGAATTCAATTGAAATGGGCCCT...TCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAACATTGACTTGCACATaGGCTGTTTCAACTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RCGEGWERSTTVHMNEWKTLTCT*AVSTFA Trigger: TGCGAAAGTTGAAACAGCGCATGTGCAAGTCAATGT...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAGTATGTATCCTGAGTTaGCATTTTGATGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCGEGWERSTTVHMNEWKVCILS*HFDGDS Trigger: ACTGTCCCCATCAAAATGCCAACTCAGGATACATAC...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CCA 90 bp | CACTACACAGATCCAAAGATGCTAAACAAGATGGAAGGCCAAGGGAGCATGCTTGTATGTATCCTGAGTTaGCATTTTGATGGGGACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HYTDPKMLNKMEGQGSMLVCILS*HFDGDS Trigger: ACTGTCCCCATCAAAATGCCAACTCAGGATACATAC...AAGCATGCTCCCTTGGCCTTCCATCTTGTTTAGCATCTTTGGATCTGTGTAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTACATTGACTTGCACATaGGCTGTTTCAACTTTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGTLTCT*AVSTFA Trigger: TGCGAAAGTTGAAACAGCGCATGTGCAAGTCAATGT...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR TCA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGAGAGGAGTACACCTaGAGGAACATGGATGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIREEYT*RNMDVF Trigger: AAATACATCCATGTTCCTTCAGGTGTACTCCTCTCT...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | CACTACACAGATCCAAAGATGCTAAACAAGATGGAAGGCCAAGGGAGCATGCTTCACTATGCTGTATTCTaGAATTTTAAAGTCCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: HYTDPKMLNKMEGQGSMLHYAVF*NFKVLS Trigger: ACTCAGGACTTTAAAATTGCAGAATACAGCATAGTG...AAGCATGCTCCCTTGGCCTTCCATCTTGTTTAGCATCTTTGGATCTGTGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTTTTCAACTTTCGCATTaGTGTCGATTGTTACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGFQLSH*CRLLLV Trigger: CACTAGTAACAATCGACAGCAATGCGAAAGTTGAAA...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR GCA 90 bp | GTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGACATTTGTTCACATTGACTTaGACATGCGCTGTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTQSQNGMQGIYSLISGHLFTLT*TCAVST Trigger: AGTTGAAACAGCGCATGTGCAAGTCAATGTGAACAA...ATGTCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR GCA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATATTTCAACTTTCGCATTaGTGTCGATTGTTACTAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIFQLSH*CRLLLV Trigger: CACTAGTAACAATCGACAGCAATGCGAAAGTTGAAA...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS TCA 90 bp | AACACGGAGAAGAACGCTTCCCCCTTCAGCAACGCTGGCTGGCACTaGTTCAATAGTGAGGAGTGCAGGTGGAGAAGGGCGCCCACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NTEKNASPFSNAGWH*FNSEECRWRRAPTD Trigger: ATCTGTGGGCGCCCTTCTCCACCTGCACTCCTCACTATTGAATCAGTGCCAGCCAGCGTTGCTGAAGGGGGAAGCGTTCTTCTCCGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS GCA 90 bp | GTGTCTTCCCGGGTGGCACTTTGGATCCACAGGGACCCGTTGCTGTaGAATGTCTCTCTACCACTGTGCTCAGGTCCTGTCACACTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSRVALWIHRDPLL*NVSLPLCSGPVTLV Trigger: CACAAGTGTGACAGGACCTGAGCACAGTGGTAGAGAGACATTGCACAGCAACGGGTCCCTGTGGATCCAAAGTGCCACCCGGGAAGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCCAGGAGGTCCACCCATaGCTGAGAAGCTCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: ICNWQGWVGVDISIQKCPQEVHP*LRSSED Trigger: GTCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTG...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CCA 90 bp | GACCTGGAGAAGAACACTTTCCCCTTCGACAGCATGTGGTGGCACTaGATCGATCCTCAGTTGGACAGAGTTGAAAGCGTCACAGCACGA | + |
|
Preference number: 5 (lower is better) Translates to: DLEKNTFPFDSMWWH*IDPQLDRVESVTAR Trigger: TCGTGCTGTGACGCTTTCAACTCTGTCCAACTGAGGATCGATCCAGTGCCACCACATGCTGTCGAAGGGGAAAGTGTTCTTCTCCAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGACAGGAGGTCCACCCATaGCTGAGAAGCTCAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EVTQSQNGMQGIYSLISGQEVHP*LRSSED Trigger: GTCCTCTGAGCTTCTCAGCAATGGGTGGACCTCCTG...TCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCAGCAGCAGGGATCCATaGCTGTACACTATCTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: ICNWQGWVGVDISIQKCPSSRDP*LYTISL Trigger: TAGAGAGATAGTGTACAGCAATGGATCCCTGCTGCT...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS TCA 90 bp | TGCTGTCGATTGTTACTAGTGTGTAGAAGCCAGAGTCTTTCTCAGTaGCATCCTGGAGGAGCAGGGATCCATTGGTGTACCCTATCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CCRLLLVCRSQSLSQ*HPGGAGIHWCTLSL Trigger: GAGAGATAGGGTACACCAATGGATCCCTGCTCCTCCAGGATGTCACTGAGAAAGACTCTGGCTTCTACACACTAGTAACAATCGACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CCA 90 bp | ACGCCTTTGTACCACAAAAAGGTTTGCACATCTTCTGGCAGATTATaGACCTGGAGAAGAACACTTTCCCCTTCGACAGCATGTGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TPLYHKKVCTSSGRL*TWRRTLSPSTACGG Trigger: GCCACCACATGCTGTCGAAGGGGAAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTACAAAGGCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTCTCAGTTGGACAGAGTaGAAAGCGTCACAGCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SHIKGRKIVVGSRWREGTLSWTE*KASQHE Trigger: CTCGTGCTGTGACGCTTTCAACTCTGTCCAACTGAG...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGTAACTGGCAGGGGTGGGTAGGTGTGGACATCTCAATACAGAAATGCCCCGTACCACAAAAAGGTTaGCACATCTTCTGGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ICNWQGWVGVDISIQKCPVPQKG*HIFWQI Trigger: AATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTAC...GGGGCATTTCTGTATTGAGATGTCCACACCTACCCACCCCTGCCAGTTACAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAGGCTGTGTCACAAGCTaGTTCACATTGACTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RCGEGWERSTTVHMNEWKGCVTS*FTLTCT Trigger: TGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCC...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | GAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAAGTGGAGTTGAAGGCCTCACATaGATACTCTCCAGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: EVTQSQNGMQGIYSLISGVEGLT*ILSSIL Trigger: GAGGATGCTGGAGAGTATCAATGTGAGGCCTTCAAC...TCCACTTATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR CAA 90 bp | TCTCACATAAAAGGGAGAAAAATAGTCGTAGGAAGCAGATGGAGGGAGGGAACTGTTGAAGGCCTCACATaGATACTCTCCAGCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SHIKGRKIVVGSRWREGTVEGLT*ILSSIL Trigger: GAGGATGCTGGAGAGTATCAATGTGAGGCCTTCAAC...AGTTCCCTCCCTCCATCTGCTTCCTACGACTATTTTTCTCCCTTTTATGTGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | GAGAGATCGACAACTGTCCATATGAATGAATGGAAATCTGTAACTGGCAGGGGTCAGGGCCCATTTCAATaGAATTCTTGGCGGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ERSTTVHMNEWKSVTGRGQGPFQ*NSWRFC Trigger: ACAGAACCGCCAAGAATTCAATTGAAATGGGCCCTG...ACCCCTGCCAGTTACAGATTTCCATTCATTCATATGGACAGTTGTCGATCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS-3UTR CAA 90 bp | AGGTGTGGGGAGGGATGGGAGAGATCGACAACTGTCCATATGAATGAATGGAAAGTACCACAAAAAGGTTaGCACATCTTCTGGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: RCGEGWERSTTVHMNEWKVPQKG*HIFWQI Trigger: AATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTAC...TTTCCATTCATTCATATGGACAGTTGTCGATCTCTCCCATCCCTCCCCACACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS-3UTR CAA 90 bp | CTAAGTGAGGTAACACAGTCCCAAAATGGCATGCAGGGTATATACTCACTGATAGGCTGTGTCACAAGCTaGTTCACATTGACTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LSEVTQSQNGMQGIYSLIGCVTS*FTLTCT Trigger: TGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCC...TATCAGTGAGTATATACCCTGCATGCCATTTTGGGACTGTGTTACCTCACTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS TCA 90 bp | ACAGAGTTGAAAGCGTCACAGCACGAGGAAAGGGAGGAGTACACCTaGAGGAACATGGATGTATTTGATACCACTTTTCCATTTTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: TELKASQHEEREEYT*RNMDVFDTTFPFLL Trigger: AAGTAAAAATGGAAAAGTGGTATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCCCTTTCCTCGTGCTGTGACGCTTTCAACTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182853.2 |
||
| CDS TCA 90 bp | TCTACCACTGTGCTCAGGTCCTGTCACACTTGTGTTATAGTCCAGTaGATACAGTGCAATTCCAAGCTTAAATTTTATTACCCCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: STTVLRSCHTCVIVQ*IQCNSKLKFYYPSV Trigger: TACAGAGGGGTAATAAAATTTAAGCTTGGAATTGCACTGTATTCACTGGACTATAACACAAGTGTGACAGGACCTGAGCACAGTGGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS GCA 72 bp | CAGCAGGTTAAGAGGGAGGCTGTGAGCAGAACCCTCTaGCAGGAGGTCCACCCATTGCTGAGAAGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQVKREAVSRTL*QEVHPLLRSSE Trigger: CTCTGAGCTTCTCAGCAATGGGTGGACCTCCTGGCAGAGGGTTCTGCTCACAGCCTCCCTCTTAACCTGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS GCA 72 bp | CGGGTGGCACTTTGGATCCACAGGGACCCGTTGCTGTaGAATGTCTCTCTACCACTGTGCTCAGGTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RVALWIHRDPLL*NVSLPLCSGPV Trigger: GACAGGACCTGAGCACAGTGGTAGAGAGACATTGCACAGCAACGGGTCCCTGTGGATCCAAAGTGCCACCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS GCA 72 bp | CTTCCCGGGTGGCACTTTGGATCCACAGGGACCCGTTaGTGTGCAATGTCTCTCTACCACTGTGCTCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LPGWHFGSTGTR*CAMSLYHCAQV Trigger: GACCTGAGCACAGTGGTAGAGAGACATTGCACAGCAACGGGTCCCTGTGGATCCAAAGTGCCACCCGGGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CAA 72 bp | TCTTCCCGGGTGGCACTTTGGATCCACAGGGACCCGTaGCTGTGCAATGTCTCTCTACCACTGTGCTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: SSRVALWIHRDP*LCNVSLPLCSG Trigger: ACCTGAGCACAGTGGTAGAGAGACATTGCACAGCAACGGGTCCCTGTGGATCCAAAGTGCCACCCGGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | AGACCACTGAGCTCTGTACTCGAACTGTGCTATCTGTaGCTCTCATGGCAGGCTGTGTCACAAGCTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RPLSSVLELCYL*LSWQAVSQACS Trigger: TGAACAAGCTTGTGACACAGCCTGCCATGAGAGTCACAGATAGCACAGTTCGAGTACAGAGCTCAGTGGTCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | AACGGATGGAGACCCCAGTGTTGTCTGAGAAGCAAGTaGAGACCACTGAGCTCTGTACTCGAACTGTGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: NGWRPQCCLRSK*RPLSSVLELCY Trigger: ATAGCACAGTTCGAGTACAGAGCTCAGTGGTCTTCACTTGCTTCTCAGACAACACTGGGGTCTCCATCCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | CTCCTTCCTCACAGTATGTATCCTGAGTTGGCATTTTaGTGGGGACAGTGTCATCCTCTCTGTGAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPHSMYPELAF*WGQCHPLCELQ Trigger: CTGCAGCTCACAGAGAGGATGACACTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS GCA 72 bp | GGATCCATTGGTGTACCCTATCTCTCTTCCACTGTGTaGACGGCCACTGATGATAGACTCTGTCACTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSIGVPYLSSTV*TATDDRLCHYA Trigger: AGCATAGTGACAGAGTCTATCATCAGTGGCCGTGCACACAGTGGAAGAGAGATAGGGTACACCAATGGATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | TTGTTACTAGTGTGTAGAAGCCAGAGTCTTTCTCAGTaGCATCCTGGAGGAGCAGGGATCCATTGGTGTACC | + |
|
Preference number: 6 (lower is better) Translates to: LLLVCRSQSLSQ*HPGGAGIHWCT Trigger: GGTACACCAATGGATCCCTGCTCCTCCAGGATGTCACTGAGAAAGACTCTGGCTTCTACACACTAGTAACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | ACTCTCCAGCATCCTCCTTCCTCACAGTATGTATCCTaGGTTGGCATTTTGATGGGGACAGTGTCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLQHPPSSQYVS*VGILMGTVSSS Trigger: AGAGGATGACACTGTCCCCATCAAAATGCCAACTCAGGATACATACTGTGAGGAAGGAGGATGCTGGAGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CAA 90 bp | CGAACTGTGCTATCTGTGACTCTCATGGCAGGCTGTGTCACAAGCTaGTTCACATTGACTTGCACATGCGCTGTTTCAACTTTCGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: RTVLSVTLMAGCVTS*FTLTCTCAVSTFAL Trigger: CAATGCGAAAGTTGAAACAGCGCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCCTGCCATGAGAGTCACAGATAGCACAGTTCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CAA 90 bp | CTATCTGTGACTCTCATGGCAGGCTGTGTCACAAGCTTGTTCACATaGACTTGCACATGCGCTGTTTCAACTTTCGCATTGCTGTCGATT | + |
|
Preference number: 6 (lower is better) Translates to: LSVTLMAGCVTSLFT*TCTCAVSTFALLSI Trigger: AATCGACAGCAATGCGAAAGTTGAAACAGCGCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCCTGCCATGAGAGTCACAGATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CCA 72 bp | GACGCCTTTGTACCACAAAAAGGTTTGCACATCTTCTaGCAGATTATGGACCTGGAGAAGAACACTTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DAFVPQKGLHIF*QIMDLEKNTFP Trigger: GGGGAAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTACAAAGGCGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CAA 72 bp | CTGTACCAGGCAAAGACTCGAAGATTCTCTGGCAGATaGTCCACTCGTAGAAGAACATTTTCTCCTTCGACC | + |
|
Preference number: 6 (lower is better) Translates to: LYQAKTRRFSGR*STRRRTFSPST Trigger: GGTCGAAGGAGAAAATGTTCTTCTACGAGTGGACAATCTGCCAGAGAATCTTCGAGTCTTTGCCTGGTACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CAA 72 bp | ACTCTCATGGCAGGCTGTGTCACAAGCTTGTTCACATaGACTTGCACATGCGCTGTTTCAACTTTCGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: TLMAGCVTSLFT*TCTCAVSTFAL Trigger: CAATGCGAAAGTTGAAACAGCGCATGTGCAAGTCAATGTGAACAAGCTTGTGACACAGCCTGCCATGAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | GAAGGGCGCCCACAGATGAAAAGAGAGGAGTACACCTaGAGGAACATGGATGTATTTGATACCACTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: EGRPQMKREEYT*RNMDVFDTTFP Trigger: TGGAAAAGTGGTATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCTCTTTTCATCTGTGGGCGCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||
| CDS CCA 72 bp | AAAAAGGTTTGCACATCTTCTGGCAGATTATGGACCTaGAGAAGAACACTTTCCCCTTCGACAGCATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: KKVCTSSGRLWT*RRTLSPSTACG Trigger: ACCACATGCTGTCGAAGGGGAAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CCA 72 bp | TACCACAAAAAGGTTTGCACATCTTCTGGCAGATTATaGACCTGGAGAAGAACACTTTCCCCTTCGACAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YHKKVCTSSGRL*TWRRTLSPSTA Trigger: TGCTGTCGAAGGGGAAAGTGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTTGTGGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CAA 72 bp | ATGTCTCTCTACCACTGTGCTCAGGTCCTGTCACACTaGTGTTATAGTCCAGTGAATACAGTGCAATTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: MSLYHCAQVLSH*CYSPVNTVQFQ Trigger: TTGGAATTGCACTGTATTCACTGGACTATAACACAAGTGTGACAGGACCTGAGCACAGTGGTAGAGAGACAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS CCA 72 bp | AGCACGAGGAAAGGGAGGAGTACACCTGAAGGAACATaGATGTATTTGATACCACTTTTCCATTTTTACTTA | + |
|
Preference number: 6 (lower is better) Translates to: STRKGRSTPEGT*MYLIPLFHFYL Trigger: TAAGTAAAAATGGAAAAGTGGTATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCCCTTTCCTCGTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | GTGCTCAGGTCCTGTCACACTTGTGTTATAGTCCAGTaGATACAGTGCAATTCCAAGCTTAAATTTTATTAC | + |
|
Preference number: 6 (lower is better) Translates to: VLRSCHTCVIVQ*IQCNSKLKFYY Trigger: GTAATAAAATTTAAGCTTGGAATTGCACTGTATTCACTGGACTATAACACAAGTGTGACAGGACCTGAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004657.14 ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | AAGGGAGGAGTACACCTGAAGGAACATGGATGTATTTaGTACCACTTTTCCATTTTTACTTATGGTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KGGVHLKEHGCI*YHFSIFTYGLK Trigger: TTTCAAACCATAAGTAAAAATGGAAAAGTGGTATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCCCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182853.2 |
||
| CDS TCA 72 bp | AAGAGAGGAGTACACCTGAAGGAACATGGATGTATTTaGTACCACTTTTCCATTTTTACTTATGGTTTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KRGVHLKEHGCI*YHFSIFTYGLK Trigger: TTTCAAACCATAAGTAAAAATGGAAAAGTGGTATCAAATACATCCATGTTCCTTCAGGTGTACTCCTCTCTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004657.14 |
||