Pregenerated sensors for PSG17 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004540Ensembl transcript IDs: ENSMUST00000004655.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAGAGGGATGGGAGAGATaGCCAAATGGCCATGCGAAT | + |
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Preference number: 2 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKEGWER*PNGHAN Trigger: ATTCGCATGGCCATTTGGCCATCTCTCCCATCCCTC...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATAGGCAGATGGAGGAATaGAACTGGGTAGGAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: ELESIILSEVTRFQNGMHRQMEE*NWVGEG Trigger: CCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAGGCCATGCGAATGAATaGAAATCTATAACTGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKGHANE*KSITGR Trigger: CCTGCCAGTTATAGATTTCCATTCATTCGCATGGCC...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGAAGGTGTGGGGAGGGATaGGAGAGATGGCCAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: EVTRFQNGMHGIYSLITGRCGEG*ERWPNG Trigger: GCCATTTGGCCATCTCTCCCATCCCTCCCCACACCT...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGATGTGGGAGAAAATaGAGGGGTTCAGGATCAGGT | + |
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Preference number: 2 (lower is better) Translates to: ELESIILSEVTRFQNGMHGCGRK*RGSGSG Trigger: ACCTGATCCTGAACCCCTCCATTTTCTCCCACATCC...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATGGAGGAATGGAACTaGGTAGGAGAGGGGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLMEEWN*VGEGMW Trigger: CCACATCCCCTCTCCTACCCAGTTCCATTCCTCCAT...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR TCA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAAAATGGCCATGCGAATaGATGGAAATCTATAACTGG | + |
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Preference number: 2 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKKWPCE*MEIYNW Trigger: CCAGTTATAGATTTCCATTCATTCGCATGGCCATTT...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGATATAACTGGCAGGGGTaGGTAGGTGTGGACATCTCA | + |
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Preference number: 2 (lower is better) Translates to: EVTRFQNGMHGIYSLITGYNWQG*VGVDIS Trigger: TGAGATGTCCACACCTACCCACCCCTGCCAGTTATA...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR TCA 72 bp | GGAGGGATGGGAGAGATGGCCAAATGGCCATGCGAATaGATGGAAATCTATAACTGGCAGGGGTGGGTAGGT | + |
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Preference number: 3 (lower is better) Translates to: GGMGEMAKWPCE*MEIYNWQGWVG Trigger: ACCTACCCACCCCTGCCAGTTATAGATTTCCATTCATTCGCATGGCCATTTGGCCATCTCTCCCATCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| 3UTR TCA 72 bp | AAAGTTAAACAAGTTGGAAGCCCGAGGGAGGATGCTTaGATCTCATGTAGAAGGGGAAAAATAGTAGTAAAA | + |
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Preference number: 3 (lower is better) Translates to: KVKQVGSPREDA*ISCRRGKIVVK Trigger: TTTTACTACTATTTTTCCCCTTCTACATGAGATTCAAGCATCCTCCCTCGGGCTTCCAACTTGTTTAACTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAGGGTCATCCTCTCTGTaGGCTGCAGACGCTGATTGT | + |
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Preference number: 4 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKGSSSL*AADADC Trigger: ACAATCAGCGTCTGCAGCTCACAGAGAGGATGACCC...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAGGCAGATTATGGACCTaGAGAAGAACCCTTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKGRLWT*RRTLPP Trigger: AGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCC...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATATAAGAGGGAGGCTGTaGGCAGAACCCTTTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHIRGRL*AEPFAR Trigger: CCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTAT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTCGGTGTCTTTCCAGGTaGCATTCTGGAGCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLRCLSR*HSGAAG Trigger: CCCTGCTGCTCCAGAATGTCACCTGGAAAGACACCG...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGTTTCTCTACCGCTGTaGGCAGGGCCAAGCACACTT | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHVSLPL*AGPSTL Trigger: AAGTGTGCTTGGCCCTGCCCACAGCGGTAGAGAAAC...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATAGCATGCGGTGGCAATaGATCGATACTGAGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHSMRWQ*IDTELG Trigger: CCCCAGCTCAGTATCGATCCATTGCCACCGCATGCT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTGCAGGGATCCATTGCTaGACACCGTTTCTCTACCGC | + |
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Preference number: 4 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLAGIHC*TPFLYR Trigger: GCGGTAGAGAAACGGTGTTCAGCAATGGATCCCTGC...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAATCTTCTGGCAGATTATaGACCTGGAGAAGAACCCTT | + |
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Preference number: 4 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKSSGRL*TWRRTL Trigger: AAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGA...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGAGTAAGAATTCCACAGTaGCTCTGGCAGTGGTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGVRIPQ*LWQWWA Trigger: TGCCCACCACTGCCAGAGTCACTGTGGAATTCTTAC...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATAGGGCCAAGCACACTTaGATTCTTGGCTGTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHRAKHT*ILGCSV Trigger: TACAGAACAGCCAAGAATTCAAGTGTGCTTGGCCCT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGAGCAATGGATCGATACTaGGCTGGGGAGAGTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGAMDRY*AGESQE Trigger: CTCTTGACTCTCCCCAGCTCAGTATCGATCCATTGC...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATTGTCTGAGAAGCAAGTaGAGATCACTGAGCCCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHCLRSK*RSLSPV Trigger: TACAGGGCTCAGTGATCTTCACTTGCTTCTCAGACA...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR TCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGATCATCACAGCCAGGATaGCTGGGAGACTGGTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGSSQPG*LGDWSL Trigger: CAAAGACCAGTCTCCCAGTCATCCTGGCTGTGATGA...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATTCCGAGGTGACATTTTaGATCCACAGGGACCCATTT | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHSEVTF*IHRDPF Trigger: AAATGGGTCCCTGTGGATCCAAAATGTCACCTCGGA...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGCAGCAGGGATCCATTaGTATACACTGTCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHAAGIH*YTLSLF Trigger: GAAGAGAGACAGTGTATACCAATGGATCCCTGCTGC...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTTTCTCAGTGACATCCTaGAGCAGCAGGGATCCATTG | + |
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Preference number: 4 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLFSVTS*SSRDPL Trigger: CAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAA...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGAGTACGTATCCAGAGTTaGCACTTTGACGGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGVRIQS*HFDGDR Trigger: CCTGTCCCCGTCAAAGTGCCAACTCTGGATACGTAC...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR GCA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTTCCAAGCTTCATACTTaGCACCCCTTTGTACCACAC | + |
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Preference number: 4 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLSKLHT*HPFVPH Trigger: GTGTGGTACAAAGGGGTGGCAAGTATGAAGCTTGGA...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR GCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATACGTTGACTTGCACATaGGCTGTTTCAACTCCCATA | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHTLTCT*AVSTPI Trigger: TATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGCACACTTGAATTCTTaGCTGTTCTGTATCGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHAHLNS*LFCIGQ Trigger: TTGCCCGATACAGAACAGCCAAGAATTCAAGTGTGC...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGAGGTTTGCACATCTTCTaGCAGATTATGGACCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGGLHIF*QIMDLE Trigger: CTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACC...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATACACCTGAAGGAATATaGATGTATCTGATACCAGTT | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHTPEGI*MYLIPV Trigger: AACTGGTATCAGATACATCCATATTCCTTCAGGTGT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR GCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGACTTGTTAAACACAACTaGTCCTTTGTACCAGGTAAG | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGLVKHN*SFVPGK Trigger: CTTACCTGGTACAAAGGAGCAGTTGTGTTTAACAAG...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR GCA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGATGATGGACTTCGTTaGTATGCTATATTTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: ELESIILSEVTRFQNGMHDDGLR*YAIFCN Trigger: ATTGCAAAATATAGCATAGCAACGAAGTCCATCATC...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR GCA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGATTTCAACTCCCATATTaGTGTCTGTTGTTATTAGTG | + |
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Preference number: 4 (lower is better) Translates to: EVTRFQNGMHGIYSLITGFQLPY*CLLLLV Trigger: CACTAATAACAACAGACAGCAATATGGGAGTTGAAA...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS GCA 90 bp | GGCAGGAGGCAGCAGGATAAGAGGGAGGCTGTGAGCAGAACCCTTTaGCAGGGGGTACACCCATTGCTGAGAAGCTCAGAGGACACCTCC | + |
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Preference number: 5 (lower is better) Translates to: GRRQQDKREAVSRTL*QGVHPLLRSSEDTS Trigger: GGAGGTGTCCTCTGAGCTTCTCAGCAATGGGTGTACCCCCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTATCCTGCTGCCTCCTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS GCA 90 bp | GGCAGATTATGGACCTGGAGAAGAACCCTTCCCCCTTCAGCAGCATaGGGTGGCAATGGATCGATACTGAGCTGGGGAGAGTCAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GRLWTWRRTLPPSAA*GGNGSILSWGESRG Trigger: CCCTCTTGACTCTCCCCAGCTCAGTATCGATCCATTGCCACCGCATGCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS TCA 90 bp | TCCAGCATCCTCCTTCCTCACAGTACGTATCCAGAGTTGGCACTTTaGCGGGGACAGGGTCATCCTCTCTGTGAGCTGCAGACGCTGATT | + |
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Preference number: 5 (lower is better) Translates to: SSILLPHSTYPELAL*RGQGHPLCELQTLI Trigger: AATCAGCGTCTGCAGCTCACAGAGAGGATGACCCTGTCCCCGTCAAAGTGCCAACTCTGGATACGTACTGTGAGGAAGGAGGATGCTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 90 bp | ACGCCTTTGTACCAGGAAAAGGTTTGCACATCTTCTGGCAGATTATaGACCTGGAGAAGAACCCTTCCCCCTTCAGCAGCATGCGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: TPLYQEKVCTSSGRL*TWRRTLPPSAACGG Trigger: GCCACCGCATGCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTACAAAGGCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 90 bp | TTGTACCAGGAAAAGGTTTGCACATCTTCTGGCAGATTATGGACCTaGAGAAGAACCCTTCCCCCTTCAGCAGCATGCGGTGGCAATGGA | + |
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Preference number: 5 (lower is better) Translates to: LYQEKVCTSSGRLWT*RRTLPPSAACGGNG Trigger: TCCATTGCCACCGCATGCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CAA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAGTTGAAGGCCTCACATaGGTACTCTCCAGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKVEGLT*VLSSIL Trigger: GAGGATGCTGGAGAGTACCAATGTGAGGCCTTCAAC...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS TCA 90 bp | GCTGAACACCGTTTCTCTACCGCTGTGGGCAGGGCCAAGCACACTTaGATTCTTGGCTGTTCTGTATCGGGCAATCTCAAGCTTGTTAAA | + |
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Preference number: 5 (lower is better) Translates to: AEHRFSTAVGRAKHT*ILGCSVSGNLKLVK Trigger: TTTAACAAGCTTGAGATTGCCCGATACAGAACAGCCAAGAATTCAAGTGTGCTTGGCCCTGCCCACAGCGGTAGAGAAACGGTGTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 90 bp | AGTGCTATACACGCCTTTGTACCAGGAAAAGGTTTGCACATCTTCTaGCAGATTATGGACCTGGAGAAGAACCCTTCCCCCTTCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SAIHAFVPGKGLHIF*QIMDLEKNPSPFSS Trigger: GCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTACAAAGGCGTGTATAGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 90 bp | ACTGTGCTGTCTGTGGCTTTTATGACAGGCTGTGTGGCAAGCTTGTaGACGTTGACTTGCACATGCGCTGTTTCAACTCCCATATTGCTG | + |
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Preference number: 5 (lower is better) Translates to: TVLSVAFMTGCVASL*TLTCTCAVSTPILL Trigger: CAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCACAGACAGCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CAA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTCAGGGGGTACACCCATaGCTGAGAAGCTCAGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLQGVHP*LRSSED Trigger: GTCCTCTGAGCTTCTCAGCAATGGGTGTACCCCCTG...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS-3UTR CAA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAAAGCACACTTGAATTCTaGGCTGTTCTGTATCGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKSTLEF*AVLYRA Trigger: TGCCCGATACAGAACAGCCAAGAATTCAAGTGTGCT...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATCTCCGAGGTGACATTTaGGATCCACAGGGACCCATT | + |
|
Preference number: 5 (lower is better) Translates to: ELESIILSEVTRFQNGMHLRGDI*DPQGPI Trigger: AATGGGTCCCTGTGGATCCAAAATGTCACCTCGGAG...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 90 bp | TGGATCCACAGGGACCCATTTCTGTGCAGTGTCTCTCTACCGCTGTaGTTAAGCCCTGTCACACTTACATTATATTGCAGTGAATACAGT | + |
|
Preference number: 5 (lower is better) Translates to: WIHRDPFLCSVSLPL*LSPVTLTLYCSEYS Trigger: ACTGTATTCACTGCAATATAATGTAAGTGTGACAGGGCTTAAGCACAGCGGTAGAGAGACACTGCACAGAAATGGGTCCCTGTGGATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 90 bp | GAGCAGCAGGGATCCATTGGTATACACTGTCTCTCTTCTACTCCGTaGATAGCCCATGATGATGGACTTCGTTGCTATGCTATATTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: EQQGSIGIHCLSSTP*IAHDDGLRCYAIFC Trigger: GCAAAATATAGCATAGCAACGAAGTCCATCATCATGGGCTATGCACGGAGTAGAAGAGAGACAGTGTATACCAATGGATCCCTGCTGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 90 bp | GTGGCTTTTATGACAGGCTGTGTGGCAAGCTTGTGGACGTTGACTTaGACATGCGCTGTTTCAACTCCCATATTGCTGTCTGTTGTTATT | + |
|
Preference number: 5 (lower is better) Translates to: VAFMTGCVASLWTLT*TCAVSTPILLSVVI Trigger: AATAACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 90 bp | TTTATGACAGGCTGTGTGGCAAGCTTGTGGACGTTGACTTGCACATaGGCTGTTTCAACTCCCATATTGCTGTCTGTTGTTATTAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FMTGCVASLWTLTCT*AVSTPILLSVVISV Trigger: CACACTAATAACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CCA 90 bp | GTTGTTATTAGTGTGTACACACCAGAGTCTTTCTCAGTGACATCCTaGAGCAGCAGGGATCCATTGGTATACACTGTCTCTCTTCTACTC | + |
|
Preference number: 5 (lower is better) Translates to: VVISVYTPESFSVTS*SSRDPLVYTVSLLL Trigger: GAGTAGAAGAGAGACAGTGTATACCAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAAAGACTCTGGTGTGTACACACTAATAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGTGCTATACACGCCTTaGTACCAGGAAAAGGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELESIILSEVTRFQNGMHVLYTP*YQEKVC Trigger: GCAAACCTTTTCCTGGTACAAAGGCGTGTATAGCAC...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATAGCAGCAGGGATCCATaGGTATACACTGTCTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ELESIILSEVTRFQNGMHSSRDP*VYTVSL Trigger: AAGAGAGACAGTGTATACCAATGGATCCCTGCTGCT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | AGTAAAAGGCAGATGGAGGAATGGAACTGGGTAGGAGAGGGGATGTGGGAGAAACCATATTGCTGTCTGTaGTTATTAGTGTGTACACAC | + |
|
Preference number: 5 (lower is better) Translates to: SKRQMEEWNWVGEGMWEKPYCCL*LLVCTH Trigger: GTGTGTACACACTAATAACAACAGACAGCAATATGG...TTTCTCCCACATCCCCTCTCCTACCCAGTTCCATTCCTCCATCTGCCTTTTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATATACTTGCCACCCCTTaGTACCACACAAAACCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: ELESIILSEVTRFQNGMHILATP*YHTKPR Trigger: TCTAGGTTTTGTGTGGTACAAAGGGGTGGCAAGTAT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTCGGGCAATCTCAAGCTaGTTAAACACAACTGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLRAISS*LNTTAP Trigger: AGGAGCAGTTGTGTTTAACAAGCTTGAGATTGCCCG...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | GAACTTGAGAGTATCATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATAACACAACTGCTCCTTaGTACCAGGTAAGTGATATA | + |
|
Preference number: 5 (lower is better) Translates to: ELESIILSEVTRFQNGMHNTTAP*YQVSDI Trigger: TATATCACTTACCTGGTACAAAGGAGCAGTTGTGTT...ATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGATGATACTCTCAAGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | GAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTATAACTGGAGTACCAGGAAAAGGTTaGCACATCTTCTGGCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: EVTRFQNGMHGIYSLITGVPGKG*HIFWQI Trigger: AATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTAC...TCCAGTTATAAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTGAGTGAGGTAACCAGGTTCCAAAATGGCATGCATGGTATATACTCACTTGTTTCAACTCCCATATaGCTGTCTGTTGTTATTAGT | + |
|
Preference number: 5 (lower is better) Translates to: ILSEVTRFQNGMHGIYSLVSTPI*LSVVIS Trigger: ACTAATAACAACAGACAGCAATATGGGAGTTGAAAC...AAGTGAGTATATACCATGCATGCCATTTTGGAACCTGGTTACCTCACTCAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS TCA 72 bp | CCCCTTCAGCAGCATGCGGTGGCAATGGATCGATACTaGGCTGGGGAGAGTCAAGAGGGTGACAGCACGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLQQHAVAMDRY*AGESQEGDSTR Trigger: CCTCGTGCTGTCACCCTCTTGACTCTCCCCAGCTCAGTATCGATCCATTGCCACCGCATGCTGCTGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 72 bp | TGGACCTGGAGAAGAACCCTTCCCCCTTCAGCAGCATaGGGTGGCAATGGATCGATACTGAGCTGGGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WTWRRTLPPSAA*GGNGSILSWGE Trigger: CTCTCCCCAGCTCAGTATCGATCCATTGCCACCGCATGCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 72 bp | CAGCAGGATAAGAGGGAGGCTGTGAGCAGAACCCTTTaGCAGGGGGTACACCCATTGCTGAGAAGCTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: QQDKREAVSRTL*QGVHPLLRSSE Trigger: CTCTGAGCTTCTCAGCAATGGGTGTACCCCCTGGCAAAGGGTTCTGCTCACAGCCTCCCTCTTATCCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CCA 72 bp | CTGGAGAAGAACCCTTCCCCCTTCAGCAGCATGCGGTaGCAATGGATCGATACTGAGCTGGGGAGAGTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LEKNPSPFSSMR*QWIDTELGRVK Trigger: CTTGACTCTCCCCAGCTCAGTATCGATCCATTGCCACCGCATGCTGCTGAAGGGGGAAGGGTTCTTCTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS TCA 72 bp | CTCCTTCCTCACAGTACGTATCCAGAGTTGGCACTTTaGCGGGGACAGGGTCATCCTCTCTGTGAGCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLPHSTYPELAL*RGQGHPLCELQ Trigger: CTGCAGCTCACAGAGAGGATGACCCTGTCCCCGTCAAAGTGCCAACTCTGGATACGTACTGTGAGGAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CCA 72 bp | CCAGCATCCTCCTTCCTCACAGTACGTATCCAGAGTTaGCACTTTGACGGGGACAGGGTCATCCTCTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: PASSFLTVRIQS*HFDGDRVILSV Trigger: CACAGAGAGGATGACCCTGTCCCCGTCAAAGTGCCAACTCTGGATACGTACTGTGAGGAAGGAGGATGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS TCA 72 bp | CGTTTCTCTACCGCTGTGGGCAGGGCCAAGCACACTTaGATTCTTGGCTGTTCTGTATCGGGCAATCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RFSTAVGRAKHT*ILGCSVSGNLK Trigger: CTTGAGATTGCCCGATACAGAACAGCCAAGAATTCAAGTGTGCTTGGCCCTGCCCACAGCGGTAGAGAAACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 72 bp | GAGGTGACATTTTGGATCCACAGGGACCCATTTCTGTaGAGTGTCTCTCTACCGCTGTGCTTAAGCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EVTFWIHRDPFL*SVSLPLCLSPV Trigger: GACAGGGCTTAAGCACAGCGGTAGAGAGACACTGCACAGAAATGGGTCCCTGTGGATCCAAAATGTCACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 72 bp | AGGGATCCATTGCTGAACACCGTTTCTCTACCGCTGTaGGCAGGGCCAAGCACACTTGAATTCTTGGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: RDPLLNTVSLPL*AGPSTLEFLAV Trigger: AACAGCCAAGAATTCAAGTGTGCTTGGCCCTGCCCACAGCGGTAGAGAAACGGTGTTCAGCAATGGATCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | CCGTTTCTCTACCGCTGTGGGCAGGGCCAAGCACACTaGAATTCTTGGCTGTTCTGTATCGGGCAATCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PFLYRCGQGQAH*NSWLFCIGQSQ Trigger: TTGAGATTGCCCGATACAGAACAGCCAAGAATTCAAGTGTGCTTGGCCCTGCCCACAGCGGTAGAGAAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS TCA 72 bp | CGGTTCGAAGGGTGTAATATCCTGTGTCCTCCGAGGTaGCATTTTGGATCCACAGGGACCCATTTCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: RFEGCNILCPPR*HFGSTGTHFCA Trigger: TGCACAGAAATGGGTCCCTGTGGATCCAAAATGTCACCTCGGAGGACACAGGATATTACACCCTTCGAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS TCA 72 bp | AACGGATGGAGACCCCAGTGTTGTCTGAGAAGCAAGTaGAGATCACTGAGCCCTGTACTCGTACTGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: NGWRPQCCLRSK*RSLSPVLVLCC Trigger: ACAGCACAGTACGAGTACAGGGCTCAGTGATCTTCACTTGCTTCTCAGACAACACTGGGGTCTCCATCCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 72 bp | GAAAAGGTTTGCACATCTTCTGGCAGATTATGGACCTaGAGAAGAACCCTTCCCCCTTCAGCAGCATGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EKVCTSSGRLWT*RRTLPPSAACG Trigger: ACCGCATGCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CCA 72 bp | TCTGTGGCTTTTATGACAGGCTGTGTGGCAAGCTTGTaGACGTTGACTTGCACATGCGCTGTTTCAACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVAFMTGCVASL*TLTCTCAVSTP Trigger: GGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 90 bp | CGTACTGTGCTGTCTGTGGCTTTTATGACAGGCTGTGTGGCAAGCTaGTGGACGTTGACTTGCACATGCGCTGTTTCAACTCCCATATTG | + |
|
Preference number: 6 (lower is better) Translates to: RTVLSVAFMTGCVAS*WTLTCTCAVSTPIL Trigger: CAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCACAGACAGCACAGTACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS GCA 72 bp | GGCTGTGTGGCAAGCTTGTGGACGTTGACTTGCACATaGGCTGTTTCAACTCCCATATTGCTGTCTGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GCVASLWTLTCT*AVSTPILLSVV Trigger: AACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 72 bp | ATGACAGGCTGTGTGGCAAGCTTGTGGACGTTGACTTaGACATGCGCTGTTTCAACTCCCATATTGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: MTGCVASLWTLT*TCAVSTPILLS Trigger: AGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CCA 72 bp | TACCAGGAAAAGGTTTGCACATCTTCTGGCAGATTATaGACCTGGAGAAGAACCCTTCCCCCTTCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YQEKVCTSSGRL*TWRRTLPPSAA Trigger: TGCTGCTGAAGGGGGAAGGGTTCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | TATGACAGGCTGTGTGGCAAGCTTGTGGACGTTGACTaGCACATGCGCTGTTTCAACTCCCATATTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: YDRLCGKLVDVD*HMRCFNSHIAV Trigger: GACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | CTGTCTGTGGCTTTTATGACAGGCTGTGTGGCAAGCTaGTGGACGTTGACTTGCACATGCGCTGTTTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: LSVAFMTGCVAS*WTLTCTCAVST Trigger: AGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCACAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CAA 90 bp | CTGTCTGTGGCTTTTATGACAGGCTGTGTGGCAAGCTTGTGGACGTaGACTTGCACATGCGCTGTTTCAACTCCCATATTGCTGTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSVAFMTGCVASLWT*TCTCAVSTPILLSV Trigger: AACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCACAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CCA 72 bp | AGTGTGTACACACCAGAGTCTTTCTCAGTGACATCCTaGAGCAGCAGGGATCCATTGGTATACACTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVYTPESFSVTS*SSRDPLVYTVS Trigger: AGAGACAGTGTATACCAATGGATCCCTGCTGCTCCAGGATGTCACTGAGAAAGACTCTGGTGTGTACACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | GCTTTTATGACAGGCTGTGTGGCAAGCTTGTGGACGTaGACTTGCACATGCGCTGTTTCAACTCCCATATTG | + |
|
Preference number: 6 (lower is better) Translates to: AFMTGCVASLWT*TCTCAVSTPIL Trigger: CAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 90 bp | TGTGGCTTTTATGACAGGCTGTGTGGCAAGCTTGTGGACGTTGACTaGCACATGCGCTGTTTCAACTCCCATATTGCTGTCTGTTGTTAT | + |
|
Preference number: 6 (lower is better) Translates to: CGFYDRLCGKLVDVD*HMRCFNSHIAVCCY Trigger: ATAACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCTTGCCACACAGCCTGTCATAAAAGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS GCA 72 bp | AGGGACCCATTTCTGTGCAGTGTCTCTCTACCGCTGTaGTTAAGCCCTGTCACACTTACATTATATTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: RDPFLCSVSLPL*LSPVTLTLYCS Trigger: ACTGCAATATAATGTAAGTGTGACAGGGCTTAAGCACAGCGGTAGAGAGACACTGCACAGAAATGGGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS GCA 72 bp | GGATCCATTGGTATACACTGTCTCTCTTCTACTCCGTaGATAGCCCATGATGATGGACTTCGTTGCTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: GSIGIHCLSSTP*IAHDDGLRCYA Trigger: AGCATAGCAACGAAGTCCATCATCATGGGCTATGCACGGAGTAGAAGAGAGACAGTGTATACCAATGGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 90 bp | AGCTTGTGGACGTTGACTTGCACATGCGCTGTTTCAACTCCCATATaGCTGTCTGTTGTTATTAGTGTGTACACACCAGAGTCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SLWTLTCTCAVSTPI*LSVVISVYTPESFS Trigger: TGAGAAAGACTCTGGTGTGTACACACTAATAACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGCAAGTCAACGTCCACAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS GCA 72 bp | ATAGTGCTATACACGCCTTTGTACCAGGAAAAGGTTTaGACATCTTCTGGCAGATTATGGACCTGGAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IVLYTPLYQEKV*TSSGRLWTWRR Trigger: TCTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTACAAAGGCGTGTATAGCACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | TACAGTGCAATTCCAAGCTTCATACTTGCCACCCCTTaGTACCACACAAAACCTAGAAGATTCTCTGGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: YSAIPSFILATP*YHTKPRRFSGR Trigger: TCTGCCAGAGAATCTTCTAGGTTTTGTGTGGTACAAAGGGGTGGCAAGTATGAAGCTTGGAATTGCACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | TATAGTGCTATACACGCCTTTGTACCAGGAAAAGGTTaGCACATCTTCTGGCAGATTATGGACCTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YSAIHAFVPGKG*HIFWQIMDLEK Trigger: CTTCTCCAGGTCCATAATCTGCCAGAAGATGTGCAAACCTTTTCCTGGTACAAAGGCGTGTATAGCACTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | GCACATGCGCTGTTTCAACTCCCATATTGCTGTCTGTaGTTATTAGTGTGTACACACCAGAGTCTTTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: AHALFQLPYCCL*LLVCTHQSLSQ Trigger: CTGAGAAAGACTCTGGTGTGTACACACTAATAACAACAGACAGCAATATGGGAGTTGAAACAGCGCATGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 90 bp | TGCAGTGAATACAGTGCAATTCCAAGCTTCATACTTGCCACCCCTTaGTACCACACAAAACCTAGAAGATTCTCTGGCAGATTATCAACG | + |
|
Preference number: 6 (lower is better) Translates to: CSEYSAIPSFILATP*YHTKPRRFSGRLST Trigger: CGTTGATAATCTGCCAGAGAATCTTCTAGGTTTTGTGTGGTACAAAGGGGTGGCAAGTATGAAGCTTGGAATTGCACTGTATTCACTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS TCA 72 bp | GTGCTTAAGCCCTGTCACACTTACATTATATTGCAGTaGATACAGTGCAATTCCAAGCTTCATACTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLKPCHTYIILQ*IQCNSKLHTCH Trigger: GTGGCAAGTATGAAGCTTGGAATTGCACTGTATTCACTGCAATATAATGTAAGTGTGACAGGGCTTAAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | ATTGCAGTGAATACAGTGCAATTCCAAGCTTCATACTaGCCACCCCTTTGTACCACACAAAACCTAGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: IAVNTVQFQASY*PPLCTTQNLED Trigger: ATCTTCTAGGTTTTGTGTGGTACAAAGGGGTGGCAAGTATGAAGCTTGGAATTGCACTGTATTCACTGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
||
| CDS CAA 72 bp | CGGGCAATCTCAAGCTTGTTAAACACAACTGCTCCTTaGTACCAGGTAAGTGATATAAGATACTCTGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: RAISSLLNTTAP*YQVSDIRYSGR Trigger: TCTACCAGAGTATCTTATATCACTTACCTGGTACAAAGGAGCAGTTGTGTTTAACAAGCTTGAGATTGCCCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS CAA 90 bp | TTACATTATATTGCAGTGAATACAGTGCAATTCCAAGCTTCATACTaGCCACCCCTTTGTACCACACAAAACCTAGAAGATTCTCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LHYIAVNTVQFQASY*PPLCTTQNLEDSLA Trigger: TGCCAGAGAATCTTCTAGGTTTTGTGTGGTACAAAGGGGTGGCAAGTATGAAGCTTGGAATTGCACTGTATTCACTGCAATATAATGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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| CDS TCA 72 bp | ATGATGGACTTCGTTGCTATGCTATATTTTGCAATTTaGAATAATATAGTGCTATACACGCCTTTGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: MMDFVAMLYFAI*NNIVLYTPLYQ Trigger: CTGGTACAAAGGCGTGTATAGCACTATATTATTTCAAATTGCAAAATATAGCATAGCAACGAAGTCCATCAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004655.8 |
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