Pregenerated sensors for PSG16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066760Ensembl transcript IDs: ENSMUST00000071399.13, ENSMUST00000118367.3, ENSMUST00000152671.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGTGTCTGGGATTCCACTTGATCTTTTGGACTCCTCCTAAGGGCTaGCATCACTTCTCCAGCTCTGCCCTCTGTAGCACTCTATGCTCA | + |
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Preference number: 1 (lower is better) Translates to: QCLGFHLIFWTPPKG*HHFSSSALCSTLCS Trigger: TGAGCATAGAGTGCTACAGAGGGCAGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAAGTGGAATCCCAGACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CCA 90 bp | TGTTACAGCTTCTTCTTTCAGTGTCTGGGATTCCACTTGATCTTTTaGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGCTCTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: CYSFFFQCLGFHLIF*TPPKGWHHFSSSAL Trigger: GAGGGCAGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAAGTGGAATCCCAGACACTGAAAGAAGAAGCTGTAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 90 bp | ATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTaGTGTCCAGGTAGCTTTGGGGTTAGGTGTCACTATTGGAGTATA | + |
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Preference number: 1 (lower is better) Translates to: IWAVPSVTSSLPMGD*CPGSFGVRCHYWSI Trigger: TATACTCCAATAGTGACACCTAACCCCAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR TCA 90 bp | ATCCTCTTGAGATTTGTCCATCAATGCTGGCATGTCAGTTGGTGTTaGCATGACTGTGGAAGAGGCCATGTGGATGAGATACCTTGGCTG | + |
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Preference number: 1 (lower is better) Translates to: ILLRFVHQCWHVSWC*HDCGRGHVDEIPWL Trigger: CAGCCAAGGTATCTCATCCACATGGCCTCTTCCACAGTCATGTCAACACCAACTGACATGCCAGCATTGATGGACAAATCTCAAGAGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 90 bp | AATTTCAATGTTACAGCTTCTTCTTTCAGTGTCTGGGATTCCACTTaGTCTTTTGGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGCT | + |
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Preference number: 1 (lower is better) Translates to: NFNVTASSFSVWDST*SFGLLLRAGITSPA Trigger: AGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAAGTGGAATCCCAGACACTGAAAGAAGAAGCTGTAACATTGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CCA 90 bp | ATTACCAAGTCCAGCTGCAGCATGAAGTACAACCTTGGGTATCTCTaGAACACAGCTTCTTTGTGCTCCCAGAAAACAATTTCCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: ITKSSCSMKYNLGYL*NTASLCSQKTISRR Trigger: TCTTCTGGAAATTGTTTTCTGGGAGCACAAAGAAGCTGTGTTCCAGAGATACCCAAGGTTGTACTTCATGCTGCAGCTGGACTTGGTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CCA 90 bp | GCTGGGCAAACTCCAAACTCTGCATCTCCACAGCTGATGTTAAAGTaGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTGACTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: AGQTPNSASPQLMLK*SSDIHSFFIFVDCN Trigger: GTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAACATCAGCTGTGGAGATGCAGAGTTTGGAGTTTGCCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 90 bp | GATGTTAAAGTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTaGCTGCAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: DVKVVFRYPLLFHLC*LQQTAFSEAGSTPC Trigger: ACAGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR GCA 90 bp | AGCATGAAGTACAACCTTGGGTATCTCTGGAACACAGCTTCTTTGTaGTCCCAGAAAACAATTTCCAGAAGATTTCACCTCAGTGATGCT | + |
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Preference number: 1 (lower is better) Translates to: SMKYNLGYLWNTASL*SQKTISRRFHLSDA Trigger: AGCATCACTGAGGTGAAATCTTCTGGAAATTGTTTTCTGGGAGCACAAAGAAGCTGTGTTCCAGAGATACCCAAGGTTGTACTTCATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR GCA 90 bp | TTAAAGTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTGACTaGAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTGTTAGC | + |
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Preference number: 1 (lower is better) Translates to: LKWSSDIHSFFIFVD*NKLLSLRLVPLPVS Trigger: GCTAACAGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 90 bp | ACCACAAAAACAGTCTTTATGCCACATACTGAAATTCTTCTCCGTTaGAATCACTTGGGCCAGGTCAACACAGTTCAAATTACTCCCAGC | + |
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Preference number: 1 (lower is better) Translates to: TTKTVFMPHTEILLR*NHLGQVNTVQITPS Trigger: GCTGGGAGTAATTTGAACTGTGTTGACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAGTATGTGGCATAAAGACTGTTTTTGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 90 bp | CATTCTTCACCAAAATACCACAAAAACAGTCTTTATGCCACATACTaGAATTCTTCTCCGTTGAAATCACTTGGGCCAGGTCAACACAGT | + |
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Preference number: 1 (lower is better) Translates to: HSSPKYHKNSLYATY*NSSPLKSLGPGQHS Trigger: ACTGTGTTGACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAGTATGTGGCATAAAGACTGTTTTTGTGGTATTTTGGTGAAGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR GCA 90 bp | AAAGTAGCCACATTCTTCACCAAAATACCACAAAAACAGTCTTTATaGCACATACTGAAATTCTTCTCCGTTGAAATCACTTGGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: KVATFFTKIPQKQSL*HILKFFSVEITWAR Trigger: CCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAGTATGTGGCATAAAGACTGTTTTTGTGGTATTTTGGTGAAGAATGTGGCTACTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | AACCACACCCCCACCAATCACCACAGGTCACATCACCTCATCAGGCAGGCTTGCTACCCACACTCACAGTaGCACACCCATTCCAACCAG | + |
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Preference number: 2 (lower is better) Translates to: NHTPTNHHRSHHLIRQACYPHSQ*HTHSNQ Trigger: CTGGTTGGAATGGGTGTGTCACTGTGAGTGTGGGTA...GCAAGCCTGCCTGATGAGGTGATGTGACCTGTGGTGATTGGTGGGGGTGTGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | TTGATCTTTTGGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGCTCTGCCCTCTGGTGCAGGAGAAGCTaGGCGATCTATGTCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: LIFWTPPKGWHHFSSSALWCRRS*AIYVFI Trigger: GATGAAGACATAGATCGCTCAGCTTCTCCTGCACCA...GAGGGCAGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR GCA 90 bp | TTCATCTTTGTTGACTGCAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTAGCTGGGTAGAACCTTaGCCCAAAGTCCCACTCCCT | + |
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Preference number: 2 (lower is better) Translates to: FIFVDCNKLLSLRLVPLPSWVEP*PKVPLP Trigger: AGGGAGTGGGACTTTGGGGCAAGGTTCTACCCAGCT...AGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR GCA 90 bp | TTGATCTTTTGGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGCTCTGCCCTCATGCAGAGATCAGCATaGCTGCCTCATGGGATTAAA | + |
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Preference number: 2 (lower is better) Translates to: LIFWTPPKGWHHFSSSALMQRSA*LPHGIK Trigger: TTTAATCCCATGAGGCAGGCATGCTGATCTCTGCAT...GAGGGCAGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | CACAAGCAGTACCACCTGAGTGACTCTTACACATTACCAAGTCCAGCTGCAGCAAGGGTTTTACTGCTGTaGACAGACACCATGACCAAG | + |
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Preference number: 2 (lower is better) Translates to: HKQYHLSDSYTLPSPAAARVLLL*TDTMTK Trigger: CTTGGTCATGGTGTCTGTTCACAGCAGTAAAACCCT...TGCTGCAGCTGGACTTGGTAATGTGTAAGAGTCACTCAGGTGGTACTGCTTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATTCAGAACTACAGGCATaGGCCACCATGCTGGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: LCALRNMGSPFCHFLTSHSELQA*ATMLVV Trigger: TACCACCAGCATGGTGGCTCATGCCTGTAGTTCTGA...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATCTTTGTTGACTGCAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTACTCCTCCTAAGGGCTaGCATCACTTCTCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: FIFVDCNKLLSLRLVPLPTPPKG*HHFSSS Trigger: AGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGT...AGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR CCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATCATGAGCCACCATGCTaGTGGTACATGACTGGTGAC | + |
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Preference number: 2 (lower is better) Translates to: LCALRNMGSPFCHFLTSHHEPPC*WYMTGD Trigger: GTCACCAGTCATGTACCACCAGCATGGTGGCTCATG...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR CCA 90 bp | TTGATCCACTCCACTACAGCTGCTGTTCTTGGTGATCATCCCATGGTACTGACAGTGGATGAGATACCTTaGCTGCAGCTTTCCTGTCAT | + |
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Preference number: 2 (lower is better) Translates to: LIHSTTAAVLGDHPMVLTVDEIP*LQLSCH Trigger: ATGACAGGAAAGCTGCAGCCAAGGTATCTCATCCAC...TGTCAGTACCATGGGATGATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | TCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCCAGGTAGCTTTGGTGGTACATGACTGGTaGCTGACAATTTTTACTATG | + |
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Preference number: 2 (lower is better) Translates to: SLLSLPHFPWVTDVQVALVVHDW*LTIFTM Trigger: CATAGTAAAAATTGTCAGTCACCAGTCATGTACCAC...CAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR GCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATACTCCTGAACCTAGTTaGCATGGATTCTCAGGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LCALRNMGSPFCHFLTSHTPEPS*HGFSGL Trigger: TAGCCCTGAGAATCCATGGCAACTAGGTTCAGGAGT...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR CCA 90 bp | GCTTTATGTTTTCTAAATCCTTCACTGCCTAAGCTTGGCTATCCTGGTTCTTGCGTGGAAGAGGCCATGTaGATGAGATACCTTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ALCFLNPSLPKLGYPGSCVEEAM*MRYLGC Trigger: GCAGCCAAGGTATCTCATCCACATGGCCTCTTCCAC...GCAAGAACCAGGATAGCCAAGCTTAGGCAGTGAAGGATTTAGAAAACATAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | GCTTTATGTTTTCTAAATCCTTCACTGCCTAAGCTTGGCTATCCTGGTTCTTGCCATGTCAGTTGGTGTTaGCATGACTGTGGAAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: ALCFLNPSLPKLGYPGSCHVSWC*HDCGRG Trigger: GCCTCTTCCACAGTCATGTCAACACCAACTGACATG...GCAAGAACCAGGATAGCCAAGCTTAGGCAGTGAAGGATTTAGAAAACATAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | TTGATCCACTCCACTACAGCTGCTGTTCTTGGTGATCATCCCATGGTACTGACATCTCTTTGTGAGACTTaGCCAGAGAACAAAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LIHSTTAAVLGDHPMVLTSLCET*PENKVS Trigger: AGAGACTTTGTTCTCTGGTCAAGTCTCACAAAGAGA...TGTCAGTACCATGGGATGATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR CCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGAGAATCCTGAAGTTTaGGGACTCCTGAACCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: LCALRNMGSPFCHFLTSHENPEV*GLLNLV Trigger: AACTAGGTTCAGGAGTCCCCAAACTTCAGGATTCTC...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTCAAATTACTCCCAGCAACAAAGTCTTCCATATTCCTACTAGGATGGTCCAGTTGGTGTTGACATaGCTGTGGAAGAGGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: TVQITPSNKVFHIPTRMVQLVLT*LWKRPC Trigger: ACATGGCCTCTTCCACAGTCATGTCAACACCAACTG...GACCATCCTAGTAGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR CCA 90 bp | CTGAAATTCTTCTCCGTTGAAATCACTTGGGCCAGGTCAACACAGTTCAAATTATCGGGGGCTCATCCCTaGAAAATAATGACTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: LKFFSVEITWARSTQFKLSGAHP*KIMTLL Trigger: GAGGAGAGTCATTATTTTCCAGGGATGAGCCCCCGA...TAATTTGAACTGTGTTGACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CAA 90 bp | TGCAGCATGAAGTACAACCTTGGGTATCTCTGGAACACAGCTTCTTaGTGCTCCCAGAAAACAATTTCCAGAAGATTTCACCTCAGTGAT | + |
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Preference number: 2 (lower is better) Translates to: CSMKYNLGYLWNTAS*CSQKTISRRFHLSD Trigger: ATCACTGAGGTGAAATCTTCTGGAAATTGTTTTCTGGGAGCACAAAGAAGCTGTGTTCCAGAGATACCCAAGGTTGTACTTCATGCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATCACTATTGGAGTATATaGGAGCATATTTGTCTCGGT | + |
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Preference number: 2 (lower is better) Translates to: LCALRNMGSPFCHFLTSHHYWSI*EHICLG Trigger: ACCGAGACAAATATGCTCTCATATACTCCAATAGTG...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR GCA 90 bp | TTCATCTTTGTTGACTGCAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTATGAGATACCTTGGCTaGAGCTTTCCTGTCATATAT | + |
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Preference number: 2 (lower is better) Translates to: FIFVDCNKLLSLRLVPLPMRYLG*SFPVIY Trigger: ATATATGACAGGAAAGCTGCAGCCAAGGTATCTCAT...AGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR CCA 90 bp | AATGCAATTAATCCAAGTCTCTTCACCTTAGCCTCAGGCAGACTTTTCAGACAATCCGTTGAAATCACTTaGGCCAGGTCAACACAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NAINPSLFTLASGRLFRQSVEIT*ARSTQF Trigger: GAACTGTGTTGACCTGGCCCAAGTGATTTCAACGGA...TTGTCTGAAAAGTCTGCCTGAGGCTAAGGTGAAGAGACTTGGATTAATTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CAA 90 bp | CAAAGTCCCACTCCCTTAATCTGTTATCTCCTAGAACACAAGATTTaGCTCCACTTCACTTCCTGGTATGCCTTTAATACTCGAACCATA | + |
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Preference number: 2 (lower is better) Translates to: QSPTPLICYLLEHKI*LHFTSWYAFNTRTI Trigger: TATGGTTCGAGTATTAAAGGCATACCAGGAAGTGAAGTGGAGCAAAATCTTGTGTTCTAGGAGATAACAGATTAAGGGAGTGGGACTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR TCA 90 bp | CTTGGGATAGAAACACTCCAGTTGTCCTTTACACAAAAATATTTCAATTCTGTGGCACTCAGAGAATCCTaGAGTTTGGGGACTCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: LGIETLQLSFTQKYFNSVALRES*SLGTPE Trigger: TTCAGGAGTCCCCAAACTTCAGGATTCTCTGAGTGC...CACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTCAAATTACTCCCAGCAACAAAGTCTTCCATATTCCTACTAGGATGGTCATAAATACTATCTGTTaGACCCATTTAGTGCTACCC | + |
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Preference number: 2 (lower is better) Translates to: TVQITPSNKVFHIPTRMVINTIC*THLVLP Trigger: GGGTAGCACTAAATGGGTCCAACAGATAGTATTTAT...GACCATCCTAGTAGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CCA 72 bp | GGCCATCAACTACAGCTGAGGCTTCACCTTCTCCAATaGCCTTTCCTGACCTCTCACAGTGCTAAGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: GHQLQLRLHLLQ*PFLTSHSAKPQ Trigger: CTGAGGCTTAGCACTGTGAGAGGTCAGGAAAGGCCATTGGAGAAGGTGAAGCCTCAGCTGTAGTTGATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 72 bp | ATGGCAGTATCCAGGCAGGCATGGTGCAGGAGAAGCTaGGCGATCTATGTCTTCATCCAAAGGCTGCTAGTG | + |
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Preference number: 3 (lower is better) Translates to: MAVSRQAWCRRS*AIYVFIQRLLV Trigger: CACTAGCAGCCTTTGGATGAAGACATAGATCGCTCAGCTTCTCCTGCACCATGCCTGCCTGGATACTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 72 bp | TCCAGCTCTGCCCTCTGTAGCACTCTATGCTCAGCTTaGTCCACTCCACTACAGCTGCTGTTCTTGGTGATC | + |
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Preference number: 3 (lower is better) Translates to: SSSALCSTLCSA*STPLQLLFLVI Trigger: GATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAAGCTGAGCATAGAGTGCTACAGAGGGCAGAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR GCA 72 bp | ATAGGCTCTCTTCAGGGTGCCAAGCCTCAAATCCTTTaGATGACCCCTAGGCCATCAACTACAGCTGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: IGSLQGAKPQIL*MTPRPSTTAEA Trigger: AGCCTCAGCTGTAGTTGATGGCCTAGGGGTCATGCAAAGGATTTGAGGCTTGGCACCCTGAAGAGAGCCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR CCA 72 bp | TATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATaGGTGACTGATGTCCAGGTAGCTTTGGGGTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: YGQSLLSLPHFP*VTDVQVALGLG Trigger: ACCTAACCCCAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR-3UTR CAA 90 bp | TTGATCCACTCCACTACAGCTGCTGTTCTTGGTGATCATCCCATGGTACTGACAAAGCTGGGTAGAACCTaGCCCCAAAGTCCCACTCCC | + |
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Preference number: 3 (lower is better) Translates to: LIHSTTAAVLGDHPMVLTKLGRT*PQSPTP Trigger: GGGAGTGGGACTTTGGGGCAAGGTTCTACCCAGCTT...TGTCAGTACCATGGGATGATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 72 bp | GTCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTaGTGTCCAGGTAGCTTTGGGGTTAGGTGTCACTAT | + |
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Preference number: 3 (lower is better) Translates to: VPSVTSSLPMGD*CPGSFGVRCHY Trigger: ATAGTGACACCTAACCCCAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| 3UTR GCA 72 bp | CATGCCTGCCTCATGGGATTAAAGGTGGTACCACCATaGCTGGATCTAATTAAGCTGGGTAGAACCTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: HACLMGLKVVPP*LDLIKLGRTLP Trigger: GGGCAAGGTTCTACCCAGCTTAATTAGATCCAGGCATGGTGGTACCACCTTTAATCCCATGAGGCAGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR-3UTR CAA 90 bp | AACCACACCCCCACCAATCACCACAGGTCACATCACCTCATCAGGCAGGCTTGCACTCCTTTTTCATCTTaGTTGACTGCAACAAACTGC | + |
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Preference number: 3 (lower is better) Translates to: NHTPTNHHRSHHLIRQACTPFSS*LTATNC Trigger: GCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGT...GCAAGCCTGCCTGATGAGGTGATGTGACCTGTGGTGATTGGTGGGGGTGTGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| 3UTR TCA 72 bp | GCAACTAGGGTGAGGATCTTATACCCACACTCACAGTaGCACACCCATTCCAACCAGGTCACACCTATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ATRVRILYPHSQ*HTHSNQVTPIP Trigger: TGGAATAGGTGTGACCTGGTTGGAATGGGTGTGTCACTGTGAGTGTGGGTATAAGATCCTCACCCTAGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | CTTCCATTCTTAACTCTAGAGCCAGAGCCACATGGCTaGAGCTGCCGAGTTCTGCTGCTTACAGGAACTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPFLTLEPEPHG*SCRVLLLTGTR Trigger: TCTAGTTCCTGTAAGCAGCAGAACTCGGCAGCTTCAGCCATGTGGCTCTGGCTCTAGAGTTAAGAATGGAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | GGTGATCATCCCATGGTACTGACATCTCCAATACACTaGGGTGTTCCACTCCAACTAGGCTTCACCAATAGC | + |
|
Preference number: 3 (lower is better) Translates to: GDHPMVLTSPIH*GVPLQLGFTNS Trigger: GCTATTGGTGAAGCCTAGTTGGAGTGGAACACCCCAGTGTATTGGAGATGTCAGTACCATGGGATGATCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | CAGCTTGATCCACTCCACTACAGCTGCTGTTCTTGGTaGTCATCCCATGGTACTGACATCTCCAATACACTG | + |
|
Preference number: 3 (lower is better) Translates to: QLDPLHYSCCSW*SSHGTDISNTL Trigger: CAGTGTATTGGAGATGTCAGTACCATGGGATGATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | TCAGTTGGTGTTGACATGACTGTGGAAGAGGCCATGTaGATGAGATACCTTGGCTGCAGCTTTCCTGTCATA | + |
|
Preference number: 3 (lower is better) Translates to: SVGVDMTVEEAM*MRYLGCSFPVI Trigger: TATGACAGGAAAGCTGCAGCCAAGGTATCTCATCCACATGGCCTCTTCCACAGTCATGTCAACACCAACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | TTCTTCTTTCAGTGTCTGGGATTCCACTTGATCTTTTaGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FFFQCLGFHLIF*TPPKGWHHFSS Trigger: GCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAAGTGGAATCCCAGACACTGAAAGAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | TCAGGCAGCTACTTACTTCAAATCCCCCAGCCTCTCTaGTTACAAGTGTTTTTCTCTCCAGCCACAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: SGSYLLQIPQPL*LQVFFSPATTT Trigger: TGTGGTTGTGGCTGGAGAGAAAAACACTTGTAACCAGAGAGGCTGGGGGATTTGAAGTAAGTAGCTGCCTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | GTTACAGCTTCTTCTTTCAGTGTCTGGGATTCCACTTaGTCTTTTGGACTCCTCCTAAGGGCTGGCATCACT | + |
|
Preference number: 3 (lower is better) Translates to: VTASSFSVWDST*SFGLLLRAGIT Trigger: AGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAAGTGGAATCCCAGACACTGAAAGAAGAAGCTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | ACACTGTACCATGTTAAAAGGGCACTCAGAGAATCCTaGAGTTTGGGGACTCCTGAACCTAGTTGCCATGGA | + |
|
Preference number: 3 (lower is better) Translates to: TLYHVKRALRES*SLGTPEPSCHG Trigger: TCCATGGCAACTAGGTTCAGGAGTCCCCAAACTTCAGGATTCTCTGAGTGCCCTTTTAACATGGTACAGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCTTTGTTGACTGCAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTCTAGAACACAAGATTTaGCTCCACTTCACTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FIFVDCNKLLSLRLVPLPLEHKI*LHFTSW Trigger: CCAGGAAGTGAAGTGGAGCAAAATCTTGTGTTCTAG...AGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | AGATTTGTCCATCAATGCTGGCATGTCAGTTGGTGTTaGCATGACTGTGGAAGAGGCCATGTGGATGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: RFVHQCWHVSWC*HDCGRGHVDEI Trigger: TATCTCATCCACATGGCCTCTTCCACAGTCATGTCAACACCAACTGACATGCCAGCATTGATGGACAAATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | TTTTCATCTTTGTTGACTGCAACAAACTGCTTTCTCTaGGGCTGGTTCCACTCCCTGTTAGCAGCTTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FSSLLTATNCFL*GWFHSLLAAFL Trigger: GAGGAAAGCTGCTAACAGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | TCCAGCTGCAGCATGAAGTACAACCTTGGGTATCTCTaGAACACAGCTTCTTTGTGCTCCCAGAAAACAATT | + |
|
Preference number: 3 (lower is better) Translates to: SSCSMKYNLGYL*NTASLCSQKTI Trigger: AATTGTTTTCTGGGAGCACAAAGAAGCTGTGTTCCAGAGATACCCAAGGTTGTACTTCATGCTGCAGCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | GTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTaGCTGCAACAAACTGCTTTCTCTGAGGCTGGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: VVFRYPLLFHLC*LQQTAFSEAGS Trigger: GGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGACCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | CACTTGGGATTGGTTAACCTATCGGGGGCTCATCCCTaGAAAATAATGACTCTCCTCTCAGCATTCATTAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLGLVNLSGAHP*KIMTLLSAFIN Trigger: ATTAATGAATGCTGAGAGGAGAGTCATTATTTTCCAGGGATGAGCCCCCGATAGGTTAACCAATCCCAAGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCACAGCTGATGTTAAAGTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTCTACAGCTGCTGTTCTaGGTGATCATCCCATGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: STADVKVVFRYPLLFHLCLQLLF*VIIPWY Trigger: GTACCATGGGATGATCACCAAGAACAGCAGCTGTAG...ACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAACATCAGCTGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | GTGAATCAAAACTATCTAGTAGCCAGTTATGTGCACTaGGAAATATGGGCAGTCCCTTCTGTCACTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VNQNYLVASYVH*EIWAVPSVTSS Trigger: TGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAACTGGCTACTAGATAGTTTTGATTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| 3UTR GCA 72 bp | TCTTCAGATATCCACTCCTTTTTCATCTTTGTTGACTaGAACAAACTGCTTTCTCTGAGGCTGGTTCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SSDIHSFFIFVD*NKLLSLRLVPL Trigger: GAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | CATGACTGTGGAAGAGGCCATGTGGATGAGATACCTTaGCTGCAGCTTTCCTGTCATATATTAAAGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HDCGRGHVDEIP*LQLSCHILKTK Trigger: TTTTGTCTTTAATATATGACAGGAAAGCTGCAGCCAAGGTATCTCATCCACATGGCCTCTTCCACAGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR-3UTR CAA 90 bp | TGTGAATCAAAACTATCTAGTAGCCAGTTATGTGCACTGAGAAATATGGGCAGTGATGTCCAGGTAGCTTaGGGGTTAGGTGTCACTATT | + |
|
Preference number: 3 (lower is better) Translates to: CESKLSSSQLCALRNMGSDVQVA*GLGVTI Trigger: AATAGTGACACCTAACCCCAAAGCTACCTGGACATC...ACTGCCCATATTTCTCAGTGCACATAACTGGCTACTAGATAGTTTTGATTCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| 3UTR TCA 72 bp | ACAGTCTTTATGCCACATACTGAAATTCTTCTCCGTTaGAATCACTTGGGCCAGGTCAACACAGTTCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: TVFMPHTEILLR*NHLGQVNTVQI Trigger: AATTTGAACTGTGTTGACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAGTATGTGGCATAAAGACTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR TCA 72 bp | CCAAAATACCACAAAAACAGTCTTTATGCCACATACTaGAATTCTTCTCCGTTGAAATCACTTGGGCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PKYHKNSLYATY*NSSPLKSLGPG Trigger: ACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAGTATGTGGCATAAAGACTGTTTTTGTGGTATTTTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CCA 72 bp | CTCCTAGAACACAAGATTTTGCTCCACTTCACTTCCTaGTATGCCTTTAATACTCGAACCATATATTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LLEHKILLHFTS*YAFNTRTIYFI Trigger: TATAAAATATATGGTTCGAGTATTAAAGGCATACCAGGAAGTGAAGTGGAGCAAAATCTTGTGTTCTAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR GCA 72 bp | ACATTCTTCACCAAAATACCACAAAAACAGTCTTTATaGCACATACTGAAATTCTTCTCCGTTGAAATCACT | + |
|
Preference number: 3 (lower is better) Translates to: TFFTKIPQKQSL*HILKFFSVEIT Trigger: AGTGATTTCAACGGAGAAGAATTTCAGTATGTGGCATAAAGACTGTTTTTGTGGTATTTTGGTGAAGAATGT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | TTGATCTTTTGGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGCTCTGCCCTCGAGCAGGCCCCTTGGTaGTGGAGTTCCTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LIFWTPPKGWHHFSSSALEQAPW*WSSWLC Trigger: GCAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTC...GAGGGCAGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | AACCACACCCCCACCAATCACCACAGGTCACATCACCTCATCAGGCAGGCTTGCTTCCGGGTGACATTGTaGATCCACAGGGACCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NHTPTNHHRSHHLIRQACFRVTL*IHRDPL Trigger: CAACGGGTCCCTGTGGATCCACAATGTCACCCGGAA...GCAAGCCTGCCTGATGAGGTGATGTGACCTGTGGTGATTGGTGGGGGTGTGGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CAA 72 bp | CAATCACCACAGGTCACATCACCTCATCAGGCAGGCTaGCTCAGCCAATCAGGGATTAAGGGCGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QSPQVTSPHQAG*LSQSGIKGGPS Trigger: GGATGGCCCGCCCTTAATCCCTGATTGGCTGAGCAAGCCTGCCTGATGAGGTGATGTGACCTGTGGTGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | AAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCGAGCAGGCCCCTTGGTaGTGGAGTTCCTGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KYGQSLLSLPHFPWVTDVEQAPW*WSSWLC Trigger: GCAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTC...GACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCCAGGTAGCTTTGTTCCGGGTGACATTGTaGATCCACAGGGACCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLSLPHFPWVTDVQVALFRVTL*IHRDPL Trigger: CAACGGGTCCCTGTGGATCCACAATGTCACCCGGAA...CAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | AAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCCTCTCTGTTCTGCTTTaGGCAGGCCCCTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: KYGQSLLSLPHFPWVTDVLSVLL*AGPLVM Trigger: CATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAG...GACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TTGATCCACTCCACTACAGCTGCTGTTCTTGGTGATCATCCCATGGTACTGACAGTCTCTCTACCACTGTaGGCAGGGCCTGGCACACTT | + |
|
Preference number: 4 (lower is better) Translates to: LIHSTTAAVLGDHPMVLTVSLPL*AGPGTL Trigger: AAGTGTGCCAGGCCCTGCCCACAGTGGTAGAGAGAC...TGTCAGTACCATGGGATGATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGATCCTCTTGAGATTTGTCCATCAATGCTGGCATGTCAGTTGGTGTTGCTCTCTGTTCTGCTTTaGGCAGGCCCCTTGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GEDPLEICPSMLACQLVLLSVLL*AGPLVM Trigger: CATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAG...CAACACCAACTGACATGCCAGCATTGATGGACAAATCTCAAGAGGATCCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | TTGATCTTTTGGACTCCTCCTAAGGGCTGGCATCACTTCTCCAGCTCTGCCCTCGCAGACTCTGATTGTTaGAGAGCCAATGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LIFWTPPKGWHHFSSSALADSDC*RANGWR Trigger: TCTCCATCCATTGGCTCTTCAACAATCAGAGTCTGC...GAGGGCAGAGCTGGAGAAGTGATGCCAGCCCTTAGGAGGAGTCCAAAAGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | AACCACACCCCCACCAATCACCACAGGTCACATCACCTCATCAGGCAGGCTTGCGCACACTTGAATTCTTaGCTATTATCTGTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NHTPTNHHRSHHLIRQACAHLNS*LLSVGQ Trigger: TTGCCCGACAGATAATAGCCAAGAATTCAAGTGTGC...GCAAGCCTGCCTGATGAGGTGATGTGACCTGTGGTGATTGGTGGGGGTGTGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATCCGTGTCTTTCTCAGTaGCATCCTGGAGCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCALRNMGSPFCHFLTSHPCLSQ*HPGAGE Trigger: CTCTCCTGCTCCAGGATGTCACTGAGAAAGACACGG...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | AATGCAATTAATCCAAGTCTCTTCACCTTAGCCTCAGGCAGACTTTTCAGACAACGGTGTCATTCCGGGTaGCATTCTGGAGCAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NAINPSLFTLASGRLFRQRCHSG*HSGAAG Trigger: CCCTGCTGCTCCAGAATGTCACCCGGAATGACACCG...TTGTCTGAAAAGTCTGCCTGAGGCTAAGGTGAAGAGACTTGGATTAATTGCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | AAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCGCAGACTCTGATTGTTaGAGAGCCAATGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYGQSLLSLPHFPWVTDVADSDC*RANGWR Trigger: TCTCCATCCATTGGCTCTTCAACAATCAGAGTCTGC...GACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| 3UTR CAA 72 bp | CCACCATGCCTGGATCTAATTAAGCTGGGTAGAACCTaGCCCCAAAGTCCCACTCCCTTAATCTGTTATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPCLDLIKLGRT*PQSPTPLICYL Trigger: GAGATAACAGATTAAGGGAGTGGGACTTTGGGGCAAGGTTCTACCCAGCTTAATTAGATCCAGGCATGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CAA 72 bp | GCTTGGCTATCCTGGTTCTTGCTCTGTAAATTGACCTaGAATGCAGAGATCAGCATGCCTGCCTCATGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AWLSWFLLCKLT*NAEISMPASWD Trigger: ATCCCATGAGGCAGGCATGCTGATCTCTGCATTCAAGGTCAATTTACAGAGCAAGAACCAGGATAGCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | ACTTACTTCAAATCCCCCAGCCTCTCTGGTTACAAGTGTTTTTCTCTCCAGCCAAAGAGTGTCACAGCATaGAGAAAGGGAGGTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TYFKSPSLSGYKCFSLQPKSVTA*RKGGVH Trigger: GTGGACACCTCCCTTTCTTCATGCTGTGACACTCTT...TGGCTGGAGAGAAAAACACTTGTAACCAGAGAGGCTGGGGGATTTGAAGTAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR GCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGAACACGGAGAAGGATaGTTTCCCCTTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCALRNMGSPFCHFLTSHEHGEG*FPLLQH Trigger: ATGCTGCAGAAGGGGAAAGCATCCTTCTCCGTGTTC...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATAGGGCCTGGCACACTTaGATTCTTGGCTATTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LCALRNMGSPFCHFLTSHRAWHT*ILGYYL Trigger: CAGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCT...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | AATGCAATTAATCCAAGTCTCTTCACCTTAGCCTCAGGCAGACTTTTCAGACAACCGTGTCTTTCTCAGTaGCATCCTGGAGCAGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NAINPSLFTLASGRLFRQPCLSQ*HPGAGE Trigger: CTCTCCTGCTCCAGGATGTCACTGAGAAAGACACGG...TTGTCTGAAAAGTCTGCCTGAGGCTAAGGTGAAGAGACTTGGATTAATTGCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATTTCTCAGTGACATCCTaGAGCAGGAGAGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: LCALRNMGSPFCHFLTSHFSVTS*SRRDPL Trigger: CAATGGATCTCTCCTGCTCCAGGATGTCACTGAGAA...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGGATAGAAACACTCCAGTTGTCCTTTACACAAAAATATTTCAATTCTGTGTCATCACGGCCAGGCTaGCTGGGAGACTGGATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LGIETLQLSFTQKYFNSVSSRPG*LGDWIS Trigger: CGAAATCCAGTCTCCCAGTCAGCCTGGCCGTGATGA...CACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR GCA 90 bp | TCCACAGCTGATGTTAAAGTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTGATGCTTTCCCCTTCTaGAGCATACCGTGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: STADVKVVFRYPLLFHLCDAFPF*SIPWHW Trigger: CCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATC...ACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAACATCAGCTGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR GCA 90 bp | TGTGAATCAAAACTATCTAGTAGCCAGTTATGTGCACTGAGAAATATGGGCAGTGATGCTTTCCCCTTCTaGAGCATACCGTGGCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CESKLSSSQLCALRNMGSDAFPF*SIPWHW Trigger: CCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATC...ACTGCCCATATTTCTCAGTGCACATAACTGGCTACTAGATAGTTTTGATTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR GCA 90 bp | ATTTCAAATAAAAGCATGGTCAGGCCATTCACAGCAATATACCACTCCTGGTACGAACACGGAGAAGGATaGTTTCCCCTTCTGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ISNKSMVRPFTAIYHSWYEHGEG*FPLLQH Trigger: ATGCTGCAGAAGGGGAAAGCATCCTTCTCCGTGTTC...GTACCAGGAGTGGTATATTGCTGTGAATGGCCTGACCATGCTTTTATTTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | TTATGTGCACTGAGAAATATGGGCAGTCCCTTCTGTCACTTCCTCACTTCCCATGCACACTTGAATTCTTaGCTATTATCTGTCGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LCALRNMGSPFCHFLTSHAHLNS*LLSVGQ Trigger: TTGCCCGACAGATAATAGCCAAGAATTCAAGTGTGC...ATGGGAAGTGAGGAAGTGACAGAAGGGACTGCCCATATTTCTCAGTGCACATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TCACTTAAAATGATGGCCTGTTCTTCTACACACTGCTATGTCAGAACTACAGGCGCAGGAGAGATCCATTaGTGTACACTCTCTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLKMMACSSTHCYVRTTGAGEIH*CTLSLF Trigger: GAACAGAGAGAGTGTACACCAATGGATCTCTCCTGC...GCCTGTAGTTCTGACATAGCAGTGTGTAGAAGAACAGGCCATCATTTTAAGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TTCATCTTTGTTGACTGCAACAAACTGCTTTCTCTGAGGCTGGTTCCACTCCCTACAGGCTTGTTCACTTaGATTTGCACGTGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FIFVDCNKLLSLRLVPLPTGLFT*ICTCAF Trigger: AAAAGCACACGTGCAAATCCAAGTGAACAAGCCTGT...AGGGAGTGGAACCAGCCTCAGAGAAAGCAGTTTGTTGCAGTCAACAAAGATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR GCA 90 bp | ACTTACTTCAAATCCCCCAGCCTCTCTGGTTACAAGTGTTTTTCTCTCCAGCCAGTGTCAGTTGTTTCCTaGATTCCAATCAATCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TYFKSPSLSGYKCFSLQPVSVVS*IPINLG Trigger: TCCAAGATTGATTGGAATGCAGGAAACAACTGACAC...TGGCTGGAGAGAAAAACACTTGTAACCAGAGAGGCTGGGGGATTTGAAGTAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCAAATTACTCCCAGCAACAAAGTCTTCCATATTCCTACTAGGATGGTCGCAGGAGAGATCCATTaGTGTACACTCTCTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: TVQITPSNKVFHIPTRMVAGEIH*CTLSLF Trigger: GAACAGAGAGAGTGTACACCAATGGATCTCTCCTGC...GACCATCCTAGTAGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCAAATTACTCCCAGCAACAAAGTCTTCCATATTCCTACTAGGATGGTCGTGATGGAAACCCCATaGTGTCAGTTGTTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TVQITPSNKVFHIPTRMVVMETP*CQLFPA Trigger: TGCAGGAAACAACTGACACCATGGGGTTTCCATCAC...GACCATCCTAGTAGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTGACTGCAACAAACTGCTTTTATCCTGGAGGTTGTaGACACGGAGAAGAACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WSSDIHSFFIFVDCNKLLLSWRL*TRRRTL Trigger: AAGCGTTCTTCTCCGTGTTCACAACCTCCAGGATAA...AAGCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | TGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTGACTGCAACAAACTGCTTAGGGCCTGGCACACTTaGATTCTTGGCTATTATCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSSDIHSFFIFVDCNKLLRAWHT*ILGYYL Trigger: CAGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCT...AAGCAGTTTGTTGCAGTCAACAAAGATGAAAAAGGAGTGGATATCTGAAGACCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | TTGATCCACTCCACTACAGCTGCTGTTCTTGGTGATCATCCCATGGTACTGACAGCAATTTTAAAGATCTaGAAGATCAATGCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LIHSTTAAVLGDHPMVLTAILKI*KINAPL Trigger: CAAAGGAGCATTGATCTTCCAGATCTTTAAAATTGC...TGTCAGTACCATGGGATGATCACCAAGAACAGCAGCTGTAGTGGAGTGGATCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CCA 90 bp | TCCACAGCTGATGTTAAAGTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTTTCTCAGTGACATCCTaGAGCAGGAGAGATCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: STADVKVVFRYPLLFHLCFSVTS*SRRDPL Trigger: CAATGGATCTCTCCTGCTCCAGGATGTCACTGAGAA...ACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAACATCAGCTGTGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| 3UTR CAA 72 bp | AAGTACAACCTTGGGTATCTCTGGAACACAGCTTCTTaGTGCTCCCAGAAAACAATTTCCAGAAGATTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KYNLGYLWNTAS*CSQKTISRRFH Trigger: GTGAAATCTTCTGGAAATTGTTTTCTGGGAGCACAAAGAAGCTGTGTTCCAGAGATACCCAAGGTTGTACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR TCA 90 bp | CTTGGGATAGAAACACTCCAGTTGTCCTTTACACAAAAATATTTCAATTCTGTGAAGAGTGTCACAGCATaGAGAAAGGGAGGTGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGIETLQLSFTQKYFNSVKSVTA*RKGGVH Trigger: GTGGACACCTCCCTTTCTTCATGCTGTGACACTCTT...CACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | TGTGAATCAAAACTATCTAGTAGCCAGTTATGTGCACTGAGAAATATGGGCAGTTTGAAGACCTCACATTaGTACTCTCCACCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CESKLSSSQLCALRNMGSLKTSH*YSPPSS Trigger: AGAGGATGGTGGAGAGTATCAATGTGAGGTCTTCAA...ACTGCCCATATTTCTCAGTGCACATAACTGGCTACTAGATAGTTTTGATTCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGGATAGAAACACTCCAGTTGTCCTTTACACAAAAATATTTCAATTCTGTGTTATCCTGGAGGTTGTaGACACGGAGAAGAACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGIETLQLSFTQKYFNSVLSWRL*TRRRTL Trigger: AAGCGTTCTTCTCCGTGTTCACAACCTCCAGGATAA...CACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGGATAGAAACACTCCAGTTGTCCTTTACACAAAAATATTTCAATTCTGTGTCGAGCTGGCAAGGTTaGAGACCTCACATTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: LGIETLQLSFTQKYFNSVSSWQG*RPHIDT Trigger: AGTATCAATGTGAGGTCTTCAACCTTGCCAGCTCGA...CACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TGTGAATCAAAACTATCTAGTAGCCAGTTATGTGCACTGAGAAATATGGGCAGTACAGGCTTGTTCACTTaGATTTGCACGTGTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CESKLSSSQLCALRNMGSTGLFT*ICTCAF Trigger: AAAAGCACACGTGCAAATCCAAGTGAACAAGCCTGT...ACTGCCCATATTTCTCAGTGCACATAACTGGCTACTAGATAGTTTTGATTCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TCACTTAAAATGATGGCCTGTTCTTCTACACACTGCTATGTCAGAACTACAGGCGGATTTATACGTAGTTaGCATTTTGATGGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKMMACSSTHCYVRTTGGFIRS*HFDGES Trigger: ACTTTCCCCATCAAAATGCCAACTACGTATAAATCC...GCCTGTAGTTCTGACATAGCAGTGTGTAGAAGAACAGGCCATCATTTTAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| 3UTR CAA 72 bp | ACTGTGACTGCCACCCTTGGGATAGAAACACTCCAGTaGTCCTTTACACAAAAATATTTCAATTCTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TVTATLGIETLQ*SFTQKYFNSVH Trigger: ATGCACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAGGGTGGCAGTCACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR GCA 90 bp | TCACTTAAAATGATGGCCTGTTCTTCTACACACTGCTATGTCAGAACTACAGGCTTGTTCACTTGGATTTaGACGTGTGCTTTTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: SLKMMACSSTHCYVRTTGLFTWI*TCAFSI Trigger: AATTGAAAAAGCACACGTGCAAATCCAAGTGAACAA...GCCTGTAGTTCTGACATAGCAGTGTGTAGAAGAACAGGCCATCATTTTAAGTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | TCACTTAAAATGATGGCCTGTTCTTCTACACACTGCTATGTCAGAACTACAGGCGCAATTTTAAAGATCTaGAAGATCAATGCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKMMACSSTHCYVRTTGAILKI*KINAPL Trigger: CAAAGGAGCATTGATCTTCCAGATCTTTAAAATTGC...GCCTGTAGTTCTGACATAGCAGTGTGTAGAAGAACAGGCCATCATTTTAAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CCA 90 bp | AATGCAATTAATCCAAGTCTCTTCACCTTAGCCTCAGGCAGACTTTTCAGACAAGGATTTATACGTAGTTaGCATTTTGATGGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NAINPSLFTLASGRLFRQGFIRS*HFDGES Trigger: ACTTTCCCCATCAAAATGCCAACTACGTATAAATCC...TTGTCTGAAAAGTCTGCCTGAGGCTAAGGTGAAGAGACTTGGATTAATTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR GCA 90 bp | ATTTCAAATAAAAGCATGGTCAGGCCATTCACAGCAATATACCACTCCTGGTACGGCTCTGCTATATTCTaGAATTTTAAAGATCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISNKSMVRPFTAIYHSWYGSAIF*NFKDLE Trigger: TTCCAGATCTTTAAAATTGCAGAATATAGCAGAGCC...GTACCAGGAGTGGTATATTGCTGTGAATGGCCTGACCATGCTTTTATTTGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR GCA 90 bp | CTGAAATTCTTCTCCGTTGAAATCACTTGGGCCAGGTCAACACAGTTCAAATTATTGTTCACTTGGATTTaGACGTGTGCTTTTTCAATT | + |
|
Preference number: 4 (lower is better) Translates to: LKFFSVEITWARSTQFKLLFTWI*TCAFSI Trigger: AATTGAAAAAGCACACGTGCAAATCCAAGTGAACAA...TAATTTGAACTGTGTTGACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS GCA 90 bp | AAAGGGAGGCTGCGAGCAGGAGGCCCTGCCAGGGGGTACACCCCTTaGAGGGAAGCACAGAGAACACCTCCATCTGTCTTCTCACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KGRLRAGGPARGYTP*REAQRTPPSVFSLS Trigger: TGACAGTGAGAAGACAGATGGAGGTGTTCTCTGTGCTTCCCTGCAAGGGGTGTACCCCCTGGCAGGGCCTCCTGCTCGCAGCCTCCCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152671.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCCAGGTAGCTTTGGATTCAATAGTGAGCTaGGCAGGGAAGGAAGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SLLSLPHFPWVTDVQVALDSIVS*AGKEGR Trigger: GCGCCCTTCCTTCCCTGCCAAGCTCACTATTGAATC...CAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CAA 90 bp | CCAGGCAGGCATGGTGCAGGAGAAGCTGAGCGATCTATGTCTTCATCCAAAGGCAGCAGCAGGGATCCATaGCTGTACACTGTCTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: PGRHGAGEAERSMSSSKGSSRDP*LYTVSL Trigger: TAGAGAGACAGTGTACAGCAATGGATCCCTGCTGCT...GCCTTTGGATGAAGACATAGATCGCTCAGCTTCTCCTGCACCATGCCTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS TCA 90 bp | GCTGTACACTGTCTCTCTACCACTGTGGGCAGGGCCTGGCACACTTaGATTCTTGGCTATTATCTGTCGGGCAATCTCAAGGTTCCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: AVHCLSTTVGRAWHT*ILGYYLSGNLKVPR Trigger: TCTAGGAACCTTGAGATTGCCCGACAGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCTGCCCACAGTGGTAGAGAGACAGTGTACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
||
| CDS TCA 90 bp | TGGAGCAGGAGAGATCCATTGGTGTACACTCTCTCTGTTCTGCTTTaGGCAGGCCCCTTGGTGATGGAGTTCCTGGCTCTGCTATATTCT | + |
|
Preference number: 5 (lower is better) Translates to: WSRRDPLVYTLSVLL*AGPLVMEFLALLYS Trigger: AGAATATAGCAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAGAGTGTACACCAATGGATCTCTCCTGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
||
| CDS GCA 90 bp | CTTGGCTATTATCTGTCGGGCAATCTCAAGGTTCCTAGACACATGTaGCCCTTTGTACCAGGAAAGCCCTCGAAGCTTATCCTGGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGYYLSGNLKVPRHM*PFVPGKPSKLILEV Trigger: AACCTCCAGGATAAGCTTCGAGGGCTTTCCTGGTACAAAGGGGCACATGTGTCTAGGAACCTTGAGATTGCCCGACAGATAATAGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
||
| CDS-3UTR CAA 90 bp | TCCCTTCTGTCACTTCCTCACTTCCCATGGGTGACTGATGTCCAGGTAGCTTTGCAGGGCCTGGCACACTaGAATTCTTGGCTATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLSLPHFPWVTDVQVALQGLAH*NSWLLS Trigger: AGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCTG...CAAAGCTACCTGGACATCAGTCACCCATGGGAAGTGAGGAAGTGACAGAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS GCA 90 bp | ATCTTCAGGCAGATTAAGAACACGGAGAAGGATGCTTTCCCCTTCTaGAGCATACCGTGGCATTGGATCGATGATGAGTTGGGTAGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IFRQIKNTEKDAFPF*SIPWHWIDDELGRV Trigger: GACTCTACCCAACTCATCATCGATCCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATCCTTCTCCGTGTTCTTAATCTGCCTGAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
||
| CDS CCA 90 bp | ATTAAGAACACGGAGAAGGATGCTTTCCCCTTCTGCAGCATACCGTaGCATTGGATCGATGATGAGTTGGGTAGAGTCAAGAGTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: IKNTEKDAFPFCSIP*HWIDDELGRVKSVT Trigger: TGTGACACTCTTGACTCTACCCAACTCATCATCGATCCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATCCTTCTCCGTGTTCTTAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
||
| CDS TCA 90 bp | ACTGGGAGACTGGATTTCGAGCTGGCAAGGTTGAAGACCTCACATTaGTACTCTCCACCATCCTCTTTCCTGACAGGATTTATACGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TGRLDFELARLKTSH*YSPPSSFLTGFIRS Trigger: ACTACGTATAAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATGTGAGGTCTTCAACCTTGCCAGCTCGAAATCCAGTCTCCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS CCA 90 bp | ATCGTTTGTAGTGTATACAAGCCCGTGTCTTTCTCAGTGACATCCTaGAGCAGGAGAGATCCATTGGTGTACACTCTCTCTGTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: IVCSVYKPVSFSVTS*SRRDPLVYTLSVLL Trigger: AAGCAGAACAGAGAGAGTGTACACCAATGGATCTCTCCTGCTCCAGGATGTCACTGAGAAAGACACGGGCTTGTATACACTACAAACGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
||
| CDS-3UTR CAA 90 bp | CTGAAATTCTTCTCCGTTGAAATCACTTGGGCCAGGTCAACACAGTTCAAATTAGATTCAATAGTGAGCTaGGCAGGGAAGGAAGGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: LKFFSVEITWARSTQFKLDSIVS*AGKEGR Trigger: GCGCCCTTCCTTCCCTGCCAAGCTCACTATTGAATC...TAATTTGAACTGTGTTGACCTGGCCCAAGTGATTTCAACGGAGAAGAATTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS GCA 90 bp | TTGAGCAGGCCCCTTGGTGATGGAGTTCCTGGCTCTGCTATATTCTaGAATTTTAAAGATCTGGAAGATCAATGCTCCTTTGTACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSRPLGDGVPGSAIF*NFKDLEDQCSFVPA Trigger: TGCTGGTACAAAGGAGCATTGATCTTCCAGATCTTTAAAATTGCAGAATATAGCAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
||
| CDS GCA 90 bp | CACAGGGACCCGTTGCTGGACACTATCTCTCTACCACTGTACATTTaGCCCATCACACTTACTTTAGTGTTCAGTGTGTATACAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: HRDPLLDTISLPLYI*PITLTLVFSVYTTI Trigger: AATTGTTGTATACACACTGAACACTAAAGTAAGTGTGATGGGGCAAATGTACAGTGGTAGAGAGATAGTGTCCAGCAACGGGTCCCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152671.2 |
||
| CDS CCA 90 bp | TGGAAACCCCATGGTGTCAGTTGTTTCCTGCATTCCAATCAATCTTaGATTTCTTTGGTGGTCCTCATATTGATACTCTCCACCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WKPHGVSCFLHSNQS*ISLVVLILILSTIL Trigger: GAGGATGGTGGAGAGTATCAATATGAGGACCACCAAAGAAATCCAAGATTGATTGGAATGCAGGAAACAACTGACACCATGGGGTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CAA 90 bp | GCTTTATGTTTTCTAAATCCTTCACTGCCTAAGCTTGGCTATCCTGGTTCTTGCCAGGGCCTGGCACACTaGAATTCTTGGCTATTATCT | + |
|
Preference number: 5 (lower is better) Translates to: ALCFLNPSLPKLGYPGSCQGLAH*NSWLLS Trigger: AGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCTG...GCAAGAACCAGGATAGCCAAGCTTAGGCAGTGAAGGATTTAGAAAACATAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCAAATTACTCCCAGCAACAAAGTCTTCCATATTCCTACTAGGATGGTCACCCCATGGTGTCAGTaGTTTCCTGCATTCCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: TVQITPSNKVFHIPTRMVTPWCQ*FPAFQS Trigger: TGATTGGAATGCAGGAAACAACTGACACCATGGGGT...GACCATCCTAGTAGGAATATGGAAGACTTTGTTGCTGGGAGTAATTTGAACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CAA 90 bp | TCCACAGCTGATGTTAAAGTGGTCTTCAGATATCCACTCCTTTTTCATCTTTGTGTACAGACAGATCAGTaGGTGATGGAAACCCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: STADVKVVFRYPLLFHLCVQTDQ*VMETPW Trigger: CCATGGGGTTTCCATCACCAACTGATCTGTCTGTAC...ACAAAGATGAAAAAGGAGTGGATATCTGAAGACCACTTTAACATCAGCTGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS TCA 90 bp | TCCTGCATTCCAATCAATCTTGGATTTCTTTGGTGGTCCTCATATTaGTACTCTCCACCATCCTCTTTCCTGACAGGATTTATACGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCIPINLGFLWWSSY*YSPPSSFLTGFIRS Trigger: ACTACGTATAAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATATGAGGACCACCAAAGAAATCCAAGATTGATTGGAATGCAGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CAA 90 bp | TCACTTAAAATGATGGCCTGTTCTTCTACACACTGCTATGTCAGAACTACAGGCCTTGTTCACTTGGATTaGCACGTGTGCTTTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLKMMACSSTHCYVRTTGLVHLD*HVCFFN Trigger: ATTGAAAAAGCACACGTGCAAATCCAAGTGAACAAG...GCCTGTAGTTCTGACATAGCAGTGTGTAGAAGAACAGGCCATCATTTTAAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS-3UTR CAA 90 bp | ATTTCAAATAAAAGCATGGTCAGGCCATTCACAGCAATATACCACTCCTGGTACCTTGTTCACTTGGATTaGCACGTGTGCTTTTTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ISNKSMVRPFTAIYHSWYLVHLD*HVCFFN Trigger: ATTGAAAAAGCACACGTGCAAATCCAAGTGAACAAG...GTACCAGGAGTGGTATATTGCTGTGAATGGCCTGACCATGCTTTTATTTGAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
||
| CDS-3UTR CAA 90 bp | CTTGGGATAGAAACACTCCAGTTGTCCTTTACACAAAAATATTTCAATTCTGTGGTTGAAGACCTCACATaGATACTCTCCACCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LGIETLQLSFTQKYFNSVVEDLT*ILSTIL Trigger: GAGGATGGTGGAGAGTATCAATGTGAGGTCTTCAAC...CACAGAATTGAAATATTTTTGTGTAAAGGACAACTGGAGTGTTTCTATCCCAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
||
| CDS GCA 72 bp | CTGCGAGCAGGAGGCCCTGCCAGGGGGTACACCCCTTaGAGGGAAGCACAGAGAACACCTCCATCTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LRAGGPARGYTP*REAQRTPPSVF Trigger: GAAGACAGATGGAGGTGTTCTCTGTGCTTCCCTGCAAGGGGTGTACCCCCTGGCAGGGCCTCCTGCTCGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152671.2 |
||
| CDS TCA 72 bp | AAGAACGCTTCCCCCTTCAGCAACGCTGGGCGGCACTaGTTCAATAGTGAGCTTGGCAGGGAAGGAAGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: KNASPFSNAGRH*FNSELGREGRA Trigger: CGCCCTTCCTTCCCTGCCAAGCTCACTATTGAATCAGTGCCGCCCAGCGTTGCTGAAGGGGGAAGCGTTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS CAA 72 bp | TCAGCAACGCTGGGCGGCACTGATTCAATAGTGAGCTaGGCAGGGAAGGAAGGGCGCCCACAGATGAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SATLGGTDSIVS*AGKEGRPQMKR Trigger: TCTTTTCATCTGTGGGCGCCCTTCCTTCCCTGCCAAGCTCACTATTGAATCAGTGCCGCCCAGCGTTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS TCA 72 bp | TACCAGGAAAGCCCTCGAAGCTTATCCTGGAGGTTGTaGACACGGAGAAGAACGCTTCCCCCTTCAGCAACG | + |
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Preference number: 6 (lower is better) Translates to: YQESPRSLSWRL*TRRRTLPPSAT Trigger: CGTTGCTGAAGGGGGAAGCGTTCTTCTCCGTGTTCACAACCTCCAGGATAAGCTTCGAGGGCTTTCCTGGTA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS CAA 72 bp | CGGGCAATCTCAAGGTTCCTAGACACATGTGCCCCTTaGTACCAGGAAAGCCCTCGAAGCTTATCCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RAISRFLDTCAP*YQESPRSLSWR Trigger: CCTCCAGGATAAGCTTCGAGGGCTTTCCTGGTACAAAGGGGCACATGTGTCTAGGAACCTTGAGATTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS TCA 72 bp | AGAGATCCATTGGTGTACACTCTCTCTGTTCTGCTTTaGGCAGGCCCCTTGGTGATGGAGTTCCTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RDPLVYTLSVLL*AGPLVMEFLAL Trigger: CAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAGAGTGTACACCAATGGATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | GGGGAAAGTGTGATCCTCTCTGTGAGCTGCAGACTCTaGTTGTTGAAGAGCCAATGGATGGAGACCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: GESVILSVSCRL*LLKSQWMETPV Trigger: CACTGGGGTCTCCATCCATTGGCTCTTCAACAATCAGAGTCTGCAGCTCACAGAGAGGATCACACTTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS CAA 72 bp | GAGAGATCCATTGGTGTACACTCTCTCTGTTCTGCTTaGAGCAGGCCCCTTGGTGATGGAGTTCCTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: ERSIGVHSLCSA*SRPLGDGVPGS Trigger: AGAGCCAGGAACTCCATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAGAGTGTACACCAATGGATCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS CAA 90 bp | CTGGAGCAGGAGAGATCCATTGGTGTACACTCTCTCTGTTCTGCTTaGAGCAGGCCCCTTGGTGATGGAGTTCCTGGCTCTGCTATATTC | + |
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Preference number: 6 (lower is better) Translates to: LEQERSIGVHSLCSA*SRPLGDGVPGSAIF Trigger: GAATATAGCAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAGAGTGTACACCAATGGATCTCTCCTGCTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | TGTCTCTCTACCACTGTGGGCAGGGCCTGGCACACTTaGATTCTTGGCTATTATCTGTCGGGCAATCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: CLSTTVGRAWHT*ILGYYLSGNLK Trigger: CTTGAGATTGCCCGACAGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCTGCCCACAGTGGTAGAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS CCA 72 bp | ACGGAGAAGGATGCTTTCCCCTTCTGCAGCATACCGTaGCATTGGATCGATGATGAGTTGGGTAGAGTCAAG | + |
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Preference number: 6 (lower is better) Translates to: TEKDAFPFCSIP*HWIDDELGRVK Trigger: CTTGACTCTACCCAACTCATCATCGATCCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATCCTTCTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS CAA 72 bp | CTACCACTGTGGGCAGGGCCTGGCACACTTGAATTCTaGGCTATTATCTGTCGGGCAATCTCAAGGTTCCTA | + |
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Preference number: 6 (lower is better) Translates to: LPLWAGPGTLEF*AIICRAISRFL Trigger: TAGGAACCTTGAGATTGCCCGACAGATAATAGCCAAGAATTCAAGTGTGCCAGGCCCTGCCCACAGTGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS GCA 72 bp | TATCTGTCGGGCAATCTCAAGGTTCCTAGACACATGTaGCCCTTTGTACCAGGAAAGCCCTCGAAGCTTATC | + |
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Preference number: 6 (lower is better) Translates to: YLSGNLKVPRHM*PFVPGKPSKLI Trigger: GATAAGCTTCGAGGGCTTTCCTGGTACAAAGGGGCACATGTGTCTAGGAACCTTGAGATTGCCCGACAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 ENSMUST00000152671.2 |
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| CDS CCA 72 bp | AAGGATGCTTTCCCCTTCTGCAGCATACCGTGGCATTaGATCGATGATGAGTTGGGTAGAGTCAAGAGTGTC | + |
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Preference number: 6 (lower is better) Translates to: KDAFPFCSIPWH*IDDELGRVKSV Trigger: GACACTCTTGACTCTACCCAACTCATCATCGATCCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | GATGATGAGTTGGGTAGAGTCAAGAGTGTCACAGCATaGAGAAAGGGAGGTGTCCACCTGAAGTTGCACATG | + |
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Preference number: 6 (lower is better) Translates to: DDELGRVKSVTA*RKGGVHLKLHM Trigger: CATGTGCAACTTCAGGTGGACACCTCCCTTTCTTCATGCTGTGACACTCTTGACTCTACCCAACTCATCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | ACACTCTCTCTGTTCTGCTTTGAGCAGGCCCCTTGGTaGTGGAGTTCCTGGCTCTGCTATATTCTGCAATTT | + |
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Preference number: 6 (lower is better) Translates to: TLSLFCFEQAPW*WSSWLCYILQF Trigger: AAATTGCAGAATATAGCAGAGCCAGGAACTCCATCACCAAGGGGCCTGCTCAAAGCAGAACAGAGAGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS GCA 72 bp | CAGATTAAGAACACGGAGAAGGATGCTTTCCCCTTCTaGAGCATACCGTGGCATTGGATCGATGATGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: QIKNTEKDAFPF*SIPWHWIDDEL Trigger: CAACTCATCATCGATCCAATGCCACGGTATGCTGCAGAAGGGGAAAGCATCCTTCTCCGTGTTCTTAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS CCA 72 bp | AGTGTATACAAGCCCGTGTCTTTCTCAGTGACATCCTaGAGCAGGAGAGATCCATTGGTGTACACTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SVYKPVSFSVTS*SRRDPLVYTLS Trigger: AGAGAGAGTGTACACCAATGGATCTCTCCTGCTCCAGGATGTCACTGAGAAAGACACGGGCTTGTATACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | TCGTTTGTAGTGTATACAAGCCCGTGTCTTTCTCAGTaGCATCCTGGAGCAGGAGAGATCCATTGGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: SFVVYTSPCLSQ*HPGAGEIHWCT Trigger: TGTACACCAATGGATCTCTCCTGCTCCAGGATGTCACTGAGAAAGACACGGGCTTGTATACACTACAAACGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | CTGGATTTCGAGCTGGCAAGGTTGAAGACCTCACATTaGTACTCTCCACCATCCTCTTTCCTGACAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: LDFELARLKTSH*YSPPSSFLTGF Trigger: AAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATGTGAGGTCTTCAACCTTGCCAGCTCGAAATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| CDS CAA 72 bp | ACTGGATTTCGAGCTGGCAAGGTTGAAGACCTCACATaGATACTCTCCACCATCCTCTTTCCTGACAGGATT | + |
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Preference number: 6 (lower is better) Translates to: TGFRAGKVEDLT*ILSTILFPDRI Trigger: AATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATGTGAGGTCTTCAACCTTGCCAGCTCGAAATCCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| CDS CAA 90 bp | CCACAGGGACCCGTTGCTGGACACTATCTCTCTACCACTGTACATTaGCCCCATCACACTTACTTTAGTGTTCAGTGTGTATACAACAAT | + |
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Preference number: 6 (lower is better) Translates to: PQGPVAGHYLSTTVH*PHHTYFSVQCVYNN Trigger: ATTGTTGTATACACACTGAACACTAAAGTAAGTGTGATGGGGCAAATGTACAGTGGTAGAGAGATAGTGTCCAGCAACGGGTCCCTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152671.2 |
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| CDS TCA 72 bp | AGAGTGTCACAGCATGAAGAAAGGGAGGTGTCCACCTaGAGTTGCACATGTGCTAATTCCATTTTCCGATGT | + |
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Preference number: 6 (lower is better) Translates to: RVSQHEEREVST*SCTCANSIFRC Trigger: ACATCGGAAAATGGAATTAGCACATGTGCAACTTCAGGTGGACACCTCCCTTTCTTCATGCTGTGACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS GCA 72 bp | GTTGGTGATGGAAACCCCATGGTGTCAGTTGTTTCCTaGATTCCAATCAATCTTGGATTTCTTTGGTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: VGDGNPMVSVVS*IPINLGFLWWS Trigger: GGACCACCAAAGAAATCCAAGATTGATTGGAATGCAGGAAACAACTGACACCATGGGGTTTCCATCACCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS CCA 72 bp | CCACCATCCTCTTTCCTGACAGGATTTATACGTAGTTaGCATTTTGATGGGGAAAGTGTGATCCTCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PPSSFLTGFIRS*HFDGESVILSV Trigger: CACAGAGAGGATCACACTTTCCCCATCAAAATGCCAACTACGTATAAATCCTGTCAGGAAAGAGGATGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS CAA 72 bp | TCAACACGAAGAAGGACATTTTCTCCTTCAACCACATaGAAAGGCACTGATTCAATGGTGACCTGGGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: STRRRTFSPSTT*KGTDSMVTWAV Trigger: CACTGCCCAGGTCACCATTGAATCAGTGCCTTTCAATGTGGTTGAAGGAGAAAATGTCCTTCTTCGTGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152671.2 |
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| CDS CAA 90 bp | ATGGTACAGACAGATCAGTTGGTGATGGAAACCCCATGGTGTCAGTaGTTTCCTGCATTCCAATCAATCTTGGATTTCTTTGGTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: MVQTDQLVMETPWCQ*FPAFQSILDFFGGP Trigger: AGGACCACCAAAGAAATCCAAGATTGATTGGAATGCAGGAAACAACTGACACCATGGGGTTTCCATCACCAACTGATCTGTCTGTACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS TCA 72 bp | GGTCCTCATATTGATACTCTCCACCATCCTCTTTCCTaGCAGGATTTATACGTAGTTGGCATTTTGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: GPHIDTLHHPLS*QDLYVVGILMG Trigger: CCCCATCAAAATGCCAACTACGTATAAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATATGAGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS TCA 72 bp | AGACCTCACATTGATACTCTCCACCATCCTCTTTCCTaGCAGGATTTATACGTAGTTGGCATTTTGATGGGG | + |
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Preference number: 6 (lower is better) Translates to: RPHIDTLHHPLS*QDLYVVGILMG Trigger: CCCCATCAAAATGCCAACTACGTATAAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATGTGAGGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118367.3 |
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| CDS CAA 90 bp | CATGGTGTCAGTTGTTTCCTGCATTCCAATCAATCTTGGATTTCTTaGGTGGTCCTCATATTGATACTCTCCACCATCCTCTTTCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: HGVSCFLHSNQSWIS*VVLILILSTILFPD Trigger: GTCAGGAAAGAGGATGGTGGAGAGTATCAATATGAGGACCACCAAAGAAATCCAAGATTGATTGGAATGCAGGAAACAACTGACACCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS CAA 90 bp | ATGGAAACCCCATGGTGTCAGTTGTTTCCTGCATTCCAATCAATCTaGGATTTCTTTGGTGGTCCTCATATTGATACTCTCCACCATCCT | + |
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Preference number: 6 (lower is better) Translates to: METPWCQLFPAFQSI*DFFGGPHIDTLHHP Trigger: AGGATGGTGGAGAGTATCAATATGAGGACCACCAAAGAAATCCAAGATTGATTGGAATGCAGGAAACAACTGACACCATGGGGTTTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS CAA 90 bp | CTCAGCCCTCTGTACCAGGCTAAGGTTATAAGATTCTCTGGCAGATaGTCAACACGAAGAAGGACATTTTCTCCTTCAACCACATTGAAA | + |
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Preference number: 6 (lower is better) Translates to: LSPLYQAKVIRFSGR*STRRRTFSPSTTLK Trigger: TTTCAATGTGGTTGAAGGAGAAAATGTCCTTCTTCGTGTTGACAATCTGCCAGAGAATCTTATAACCTTAGCCTGGTACAGAGGGCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152671.2 |
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| CDS GCA 72 bp | CCCCTTGGTGATGGAGTTCCTGGCTCTGCTATATTCTaGAATTTTAAAGATCTGGAAGATCAATGCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: PLGDGVPGSAIF*NFKDLEDQCSF Trigger: AAAGGAGCATTGATCTTCCAGATCTTTAAAATTGCAGAATATAGCAGAGCCAGGAACTCCATCACCAAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS CAA 90 bp | CTAACTGTGCTGTCTGTGACTCTCATGAAGGGCTGTGTCACAGGCTaGTTCACTTGGATTTGCACGTGTGCTTTTTCAATTTTGAAATTT | + |
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Preference number: 6 (lower is better) Translates to: LTVLSVTLMKGCVTG*FTWICTCAFSILKF Trigger: AAATTTCAAAATTGAAAAAGCACACGTGCAAATCCAAGTGAACAAGCCTGTGACACAGCCCTTCATGAGAGTCACAGACAGCACAGTTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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| CDS TCA 72 bp | CCAATCAATCTTGGATTTCTTTGGTGGTCCTCATATTaGTACTCTCCACCATCCTCTTTCCTGACAGGATTT | + |
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Preference number: 6 (lower is better) Translates to: PINLGFLWWSSY*YSPPSSFLTGF Trigger: AAATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATATGAGGACCACCAAAGAAATCCAAGATTGATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS CAA 72 bp | TCCAATCAATCTTGGATTTCTTTGGTGGTCCTCATATaGATACTCTCCACCATCCTCTTTCCTGACAGGATT | + |
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Preference number: 6 (lower is better) Translates to: SNQSWISLVVLI*ILSTILFPDRI Trigger: AATCCTGTCAGGAAAGAGGATGGTGGAGAGTATCAATATGAGGACCACCAAAGAAATCCAAGATTGATTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS CAA 72 bp | ACAGATCAGTTGGTGATGGAAACCCCATGGTGTCAGTaGTTTCCTGCATTCCAATCAATCTTGGATTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: TDQLVMETPWCQ*FPAFQSILDFF Trigger: AAAGAAATCCAAGATTGATTGGAATGCAGGAAACAACTGACACCATGGGGTTTCCATCACCAACTGATCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071399.13 |
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| CDS CAA 90 bp | GTCACAGGCTTGTTCACTTGGATTTGCACGTGTGCTTTTTCAATTTaGAAATTTCTGTCTATCGTTTGTAGTGTATACAAGCCCGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: VTGLFTWICTCAFSI*KFLSIVCSVYKPVS Trigger: AGACACGGGCTTGTATACACTACAAACGATAGACAGAAATTTCAAAATTGAAAAAGCACACGTGCAAATCCAAGTGAACAAGCCTGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000071399.13 ENSMUST00000118367.3 |
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