Pregenerated sensors for PSEN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000010609Ensembl transcript IDs: ENSMUST00000010753.14, ENSMUST00000111104.2, ENSMUST00000111105.8, ENSMUST00000111106.8, ENSMUST00000111108.10, ENSMUST00000133340.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGTGATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTaGTCATCCCTGGAGACTTACAGACGTGGACAGGGGCCTGCATCC | + |
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Preference number: 1 (lower is better) Translates to: QGDGASWFPQCTCSF*SSLETYRRGQGPAS Trigger: GGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCATCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR CCA 90 bp | GCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTaGAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCT | + |
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Preference number: 1 (lower is better) Translates to: APPGSHNAPVPSDHP*RLTDVDRGLHPPQP Trigger: AGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR TCA 90 bp | GGGGACATTCATGACTGCACACGGGCTTTCCACCTCTGGTCAGGGTaGTGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: GDIHDCTRAFHLWSG*WRLLVPTMHLFLLI Trigger: GATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCATCACCCTGACCAGAGGTGGAAAGCCCGTGTGCAGTCATGAATGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR CCA 90 bp | ACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCGAAGGGTaGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTAT | + |
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Preference number: 1 (lower is better) Translates to: TGKLQSGDKTGSTEG*LLLPHHEVNTTRFY Trigger: ATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCCTTCGGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR TCA 90 bp | GAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGAGACGCTTGCTTGCTaGGCATCCAAGCATCCCACC | + |
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Preference number: 2 (lower is better) Translates to: ETYRRGQGPASSPTCSTHETLAC*ASKHPT Trigger: GGTGGGATGCTTGGATGCTCAGCAAGCAAGCGTCTC...GTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR CCA 90 bp | GAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGGTAGCACCGAAGGGTaGCTTCTGCTTCCTCATCAC | + |
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Preference number: 2 (lower is better) Translates to: ETYRRGQGPASSPTCSTHGSTEG*LLLPHH Trigger: GTGATGAGGAAGCAGAAGCCACCCTTCGGTGCTACC...GTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR TCA 90 bp | TCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAGACGTGGACACACGACCTCATCCCTaGAGAGACGCTTGCTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SHNAPVPSDHPWRLTDVDTRPHP*RDACLL Trigger: CAGCAAGCAAGCGTCTCTTCAGGGATGAGGTCGTGT...GTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR GCA 90 bp | TCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAGACGTGGACCTCCGACAGGCAAGCTaGAGTCTGGTGACAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: SHNAPVPSDHPWRLTDVDLRQAS*SLVTRQ Trigger: CTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAG...GTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR CCA 90 bp | GTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTGGTAGCACCGAAGGGTaGCTTCTGCTTCCTCATCAC | + |
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Preference number: 2 (lower is better) Translates to: VTDITNTALGTFMTAHGLGSTEG*LLLPHH Trigger: GTGATGAGGAAGCAGAAGCCACCCTTCGGTGCTACC...AAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR CCA 90 bp | AGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTTCCACCCTTCTGATCATCCCTaGAGACTTACAGACGTGGAC | + |
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Preference number: 2 (lower is better) Translates to: RHHKHSTGDIHDCTRAFHPSDHP*RLTDVD Trigger: GTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGG...GTGGAAAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTAAAGTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACTCCGACAGGCAAGCTaGAGTCTGGTGACAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: GSKVTDITNTALGTFMTALRQAS*SLVTRQ Trigger: CTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAG...TGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTACTTTAGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR GCA 72 bp | ATCCCACCGGCGCCACAGATGCTCCGACAGGCAAGCTaGAGTCTGGTGACAAGACAGGTAGCACCGAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: IPPAPQMLRQAS*SLVTRQVAPKG Trigger: ACCCTTCGGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGCCGGTGGGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR TCA 72 bp | CATGACTGCACACGGGCTTTCCACCTCTGGTCAGGGTaGTGGCGCCTCCTGGTTCCCACAATGCACCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: HDCTRAFHLWSG*WRLLVPTMHLF Trigger: GAACAGGTGCATTGTGGGAACCAGGAGGCGCCATCACCCTGACCAGAGGTGGAAAGCCCGTGTGCAGTCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR GCA 72 bp | TACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTaGTCCACACACGACCTCATCCCTGAAGAGACGCTT | + |
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Preference number: 3 (lower is better) Translates to: YRRGQGPASSPT*STHDLIPEETL Trigger: AAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR TCA 72 bp | ACACACGACCTCATCCCTGAAGAGACGCTTGCTTGCTaGGCATCCAAGCATCCCACCGGCGCCACAGATGCT | + |
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Preference number: 3 (lower is better) Translates to: THDLIPEETLAC*ASKHPTGATDA Trigger: AGCATCTGTGGCGCCGGTGGGATGCTTGGATGCTCAGCAAGCAAGCGTCTCTTCAGGGATGAGGTCGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR TCA 72 bp | GGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTaGTCATCCCTGGAGACTTACAGACGTGGACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GASWFPQCTCSF*SSLETYRRGQG Trigger: CCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR GCA 72 bp | ATCATCCCTGGAGACTTACAGACGTGGACAGGGGCCTaGATCCTCCCCAACCTGCTCCACACACGACCTCAT | + |
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Preference number: 3 (lower is better) Translates to: IIPGDLQTWTGA*ILPNLLHTRPH Trigger: ATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR CCA 72 bp | CTGTTCCTTCTGATCATCCCTGGAGACTTACAGACGTaGACAGGGGCCTGCATCCTCCCCAACCTGCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LFLLIIPGDLQT*TGACILPNLLH Trigger: GTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR TCA 72 bp | ATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTaGAGAGACGCTTGCTTGCTGAGCATCCAAGCATCC | + |
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Preference number: 3 (lower is better) Translates to: ILPNLLHTRPHP*RDACLLSIQAS Trigger: GGATGCTTGGATGCTCAGCAAGCAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| 3UTR CCA 72 bp | GGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTaGAGACTTACAGACGTGGACAGGGGCCTGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: GSHNAPVPSDHP*RLTDVDRGLHP Trigger: AGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | ACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCACCTCCGGGCCTGGCCTaGCTTCCTGGCAGGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: TDVDRGLHPPQPAPHTTSPPGLA*LPGRSE Trigger: CTCGCTCCTGCCAGGAAGGCAGGCCAGGCCCGGAGG...TGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGCCTCCGGGCCTGGCCTaGCTTCCTGGCAGGAGCGAG | + |
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Preference number: 4 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLPPGLA*LPGRSE Trigger: CTCGCTCCTGCCAGGAAGGCAGGCCAGGCCCGGAGG...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | GGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCCCTGGCCTGCCTTCCTaGCAGGAGCGAGATGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLHPPQPAPHTTSSLKRRPGLPS*QERDVG Trigger: CCCCACATCTCGCTCCTGCCAGGAAGGCAGGCCAGG...GCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | GGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTGTGGGGCTCTCGGCTaGCATCAAGGACGTCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GLHPPQPAPHTTSSLKRRCGALG*HQGRPL Trigger: GAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACA...GCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | GAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACCCTGGCCTGCCTTCCTaGCAGGAGCGAGATGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ETYRRGQGPASSPTCSTHPGLPS*QERDVG Trigger: CCCCACATCTCGCTCCTGCCAGGAAGGCAGGCCAGG...GTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | ACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCAAGCTGCAGCGCTCCTTaGGAGGAGGGGTCCAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TDVDRGLHPPQPAPHTTSSCSAP*EEGSSF Trigger: AAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCT...TGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | AGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGAGGAGGGGTCCAGCTTTaGCATGCCCACCGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: RGLHPPQPAPHTTSSLKRGGVQL*HAHRPH Trigger: GTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCC...TCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | ACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCACAGTGGCTGCAGCCTTaGCCACCAGGACGCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: TDVDRGLHPPQPAPHTTSQWLQP*PPGRCR Trigger: TCTACAGCGTCCTGGTGGGCAAGGCTGCAGCCACTG...TGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | AGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGATCCTCAGTGGCCCTTTaGGGCACAGCACGGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: RGLHPPQPAPHTTSSLKRSSVAL*GTARPR Trigger: TCGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGA...TCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | GCGCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCATGTGGGGCTCTCGGCTaGCATCAAGGACGTCCGCTC | + |
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Preference number: 4 (lower is better) Translates to: APQMLRQASCSLVTRQVACGALG*HQGRPL Trigger: GAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACA...TGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | GGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCGGACGCTGTAGAAGATaGAGTCTCCCAGGCCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: GLHPPQPAPHTTSSLKRRGRCRR*SLPGRA Trigger: AGCTCGGCCTGGGAGACTTCATCTTCTACAGCGTCC...GCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | GCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCGGAGGGGTCCAGCTTTaGCATGCCCACCGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ATDAPTGKLQSGDKTGSTGGVQL*HAHRPH Trigger: GTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCC...GGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGTCCTCAGTGGCCCTTTaGGGCACAGCACGGCCACGA | + |
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Preference number: 4 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLSSVAL*GTARPR Trigger: TCGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGA...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | GAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACAGTCTCCGTTGCCAGTaGCTGCAGCCTTGCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: ETYRRGQGPASSPTCSTHSLRCQ*LQPCPP Trigger: TGGTGGGCAAGGCTGCAGCCACTGGCAACGGAGACT...GTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | AGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGAGGACGCTGTAGAAGATaGAGTCTCCCAGGCCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: RGLHPPQPAPHTTSSLKRGRCRR*SLPGRA Trigger: AGCTCGGCCTGGGAGACTTCATCTTCTACAGCGTCC...TCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGGGTCCAGCTTTGCCATaGCCACCGTCCACACCATGG | + |
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Preference number: 4 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLGPALP*PPSTPW Trigger: CCATGGTGTGGACGGTGGGCATGGCAAAGCTGGACC...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | CTGATCATCCCTGGAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCACCAGCATCCTCAGTaGCCCTTTGGGGCACAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LIIPGDLQTWTGACILPNHQHPQ*PFGAQH Trigger: GTGCTGTGCCCCAAAGGGCCACTGAGGATGCTGGTG...GTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGAGTCTCCGTTGCCAGTaGCTGCAGCCTTGCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLSLRCQ*LQPCPP Trigger: TGGTGGGCAAGGCTGCAGCCACTGGCAACGGAGACT...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGGCTTCGCCCCATACTTaGGGGTCAGCTCTTCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLASPHT*GSALPP Trigger: TGGAGGAAGAGCTGACCCTCAAGTATGGGGCGAAGC...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | GCGCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCAGGACGCTGTAGAAGATaGAGTCTCCCAGGCCGAGCT | + |
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Preference number: 4 (lower is better) Translates to: APQMLRQASCSLVTRQVAGRCRR*SLPGRA Trigger: AGCTCGGCCTGGGAGACTTCATCTTCTACAGCGTCC...TGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | GCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCAGGCCAGAGTGTCCATaGAAGGGCGCACCAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ATDAPTGKLQSGDKTGSTRPECP*KGAPGC Trigger: ACAACCTGGTGCGCCCTTTCATGGACACTCTGGCCT...GGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | GCGCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCAAGTGGATGCACACCATaGCCACTGCCCCGAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: APQMLRQASCSLVTRQVASGCTP*PLPRSS Trigger: GGAACTTCGGGGCAGTGGGCATGGTGTGCATCCACT...TGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | GCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCAGTGGATGCACACCATaGCCACTGCCCCGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATDAPTGKLQSGDKTGSTSGCTP*PLPRSS Trigger: GGAACTTCGGGGCAGTGGGCATGGTGTGCATCCACT...GGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAGAGTTGAGGAGCCGCTaGCCCACCGAGGGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPGSHNAPVPSDHPWRLTELRSR*PTEGVS Trigger: GGACACGCCCTCGGTGGGCCAGCGGCTCCTCAACTC...TGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | ATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACAGTGGCTGCAGCCTTaGCCACCAGGACGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MAPPGSHNAPVPSDHPWRQWLQP*PPGRCR Trigger: TCTACAGCGTCCTGGTGGGCAAGGCTGCAGCCACTG...TCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | ATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGAAGTCTCCGTTGCCAGTaGCTGCAGCCTTGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: MAPPGSHNAPVPSDHPWRSLRCQ*LQPCPP Trigger: TGGTGGGCAAGGCTGCAGCCACTGGCAACGGAGACT...TCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACATGTGGGGCTCTCGGCTaGCATCAAGGACGTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPGSHNAPVPSDHPWRLTCGALG*HQGRPL Trigger: GAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACA...TGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | ACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCACGAGGTAGATGTAGGTaGACAAGAAGAGGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TDVDRGLHPPQPAPHTTSRGRCR*TRRGAS Trigger: TGATGCTCCTCTTCTTGTTCACCTACATCTACCTCG...TGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | CCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACATCCTCCACTGGGCAGTaGTCTCTCCATCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPGSHNAPVPSDHPWRLTSSTGQ*SLHPPG Trigger: GCCCGGAGGATGGAGAGAGCACTGCCCAGTGGAGGA...TGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | GCGCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACAGCCAGGAAGAGTGTaGGATAGTCCATGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: APQMLRQASCSLVTRQVAQPGRV*DSPWPH Trigger: ATGTGGCCATGGACTATCCCACACTCTTCCTGGCTG...TGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | CTGATCATCCCTGGAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCCACCGTCCACACCATaGCAGATGAGTATATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LIIPGDLQTWTGACILPNPPSTP*QMSISG Trigger: CCCTGATATACTCATCTGCCATGGTGTGGACGGTGG...GTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | GCGCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCACCGTCCACACCATaGCAGATGAGTATATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: APQMLRQASCSLVTRQVAPPSTP*QMSISG Trigger: CCCTGATATACTCATCTGCCATGGTGTGGACGGTGG...TGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | CTGATCATCCCTGGAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACGTCTTCTTCCATCTCTaGGTCATAGGGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIIPGDLQTWTGACILPNVFFHL*VIGELQ Trigger: CTGCAGCTCCCCTATGACCCAGAGATGGAAGAAGAC...GTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | GAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACTCAGCCAGCCATGGATaGACTTGTAGCATCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: ETYRRGQGPASSPTCSTHSASHG*TCSIDT Trigger: AGTATCGATGCTACAAGTTCATCCATGGCTGGCTGA...GTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACCTCCGGGCCTGGCCTaGCTTCCTGGCAGGAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPPPGLA*LPGRSE Trigger: CTCGCTCCTGCCAGGAAGGCAGGCCAGGCCCGGAGG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTGGAGGGGTCCAGCTTTaGCATGCCCACCGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VTDITNTALGTFMTAHGLGGVQL*HAHRPH Trigger: GTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCC...AAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | AGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTTCCACCAGTGGCTGCAGCCTTaGCCACCAGGACGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RHHKHSTGDIHDCTRAFHQWLQP*PPGRCR Trigger: TCTACAGCGTCCTGGTGGGCAAGGCTGCAGCCACTG...GTGGAAAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | GTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTTCCTCAGTGGCCCTTTaGGGCACAGCACGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: VTDITNTALGTFMTAHGLSSVAL*GTARPR Trigger: TCGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGA...AAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTTCCACCACCAGCATCCTCAGTaGCCCTTTGGGGCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHHKHSTGDIHDCTRAFHHQHPQ*PFGAQH Trigger: GTGCTGTGCCCCAAAGGGCCACTGAGGATGCTGGTG...GTGGAAAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | GCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCTCAGCCAGCCATGGATaGACTTGTAGCATCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: ATDAPTGKLQSGDKTGSTSASHG*TCSIDT Trigger: AGTATCGATGCTACAAGTTCATCCATGGCTGGCTGA...GGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | GCGCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACGAGGTAGATGTAGGTaGACAAGAAGAGGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: APQMLRQASCSLVTRQVARGRCR*TRRGAS Trigger: TGATGCTCCTCTTCTTGTTCACCTACATCTACCTCG...TGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGCGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | TCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAGACGTGGACAGTGGATGCACACCATaGCCACTGCCCCGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHNAPVPSDHPWRLTDVDSGCTP*PLPRSS Trigger: GGAACTTCGGGGCAGTGGGCATGGTGTGCATCCACT...GTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | GTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTGGTCCAGCTTTGCCATaGCCACCGTCCACACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VTDITNTALGTFMTAHGLGPALP*PPSTPW Trigger: CCATGGTGTGGACGGTGGGCATGGCAAAGCTGGACC...AAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGAGTTGAGGAGCCGCTaGCCCACCGAGGGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPELRSR*PTEGVS Trigger: GGACACGCCCTCGGTGGGCCAGCGGCTCCTCAACTC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | ATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACAGCCAGGAAGAGTGTaGGATAGTCCATGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: MAPPGSHNAPVPSDHPWRQPGRV*DSPWPH Trigger: ATGTGGCCATGGACTATCCCACACTCTTCCTGGCTG...TCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACCTGGCCTGCCTTCCTaGCAGGAGCGAGATGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPPGLPS*QERDVG Trigger: CCCCACATCTCGCTCCTGCCAGGAAGGCAGGCCAGG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCATGTGGGGCTCTCGGCTaGCATCAAGGACGTCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPCGALG*HQGRPL Trigger: GAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACA...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | CGAAGGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCAGCTGCAGCGCTCCTTaGGAGGAGGGGTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRVASASSSRSKHDTFLFSCSAP*EEGSSF Trigger: AAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCT...GAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCCTTCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCATCCTCCACTGGGCAGTaGTCTCTCCATCCTCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPSSTGQ*SLHPPG Trigger: GCCCGGAGGATGGAGAGAGCACTGCCCAGTGGAGGA...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR GCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGGAGGGGTCCAGCTTTaGCATGCCCACCGTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPGGVQL*HAHRPH Trigger: GTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCATCCTCAGTGGCCCTTTaGGGCACAGCACGGCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPSSVAL*GTARPR Trigger: TCGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGA...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | CCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACACCACCGTCCACACCATaGCAGATGAGTATATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPGSHNAPVPSDHPWRLTPPSTP*QMSISG Trigger: CCCTGATATACTCATCTGCCATGGTGTGGACGGTGG...TGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | TCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAGACGTGGACGTCTTCTTCCATCTCTaGGTCATAGGGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHNAPVPSDHPWRLTDVDVFFHL*VIGELQ Trigger: CTGCAGCTCCCCTATGACCCAGAGATGGAAGAAGAC...GTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAAGCTGCAGCGCTCCTTaGGAGGAGGGGTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPSCSAP*EEGSSF Trigger: AAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCT...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | AGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTTCCACGAAGGCTTCAGGGTATaGGGGTTCTCCAAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RHHKHSTGDIHDCTRAFHEGFRV*GFSKTV Trigger: GACAGTTTTGGAGAACCCTCATACCCTGAAGCCTTC...GTGGAAAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | CGAAGGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCAGGCCAGAGTGTCCATaGAAGGGCGCACCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVASASSSRSKHDTFLFRPECP*KGAPGC Trigger: ACAACCTGGTGCGCCCTTTCATGGACACTCTGGCCT...GAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCCTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGGTCCAGCTTTGCCATaGCCACCGTCCACACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPGPALP*PPSTPW Trigger: CCATGGTGTGGACGGTGGGCATGGCAAAGCTGGACC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACAGTGGCTGCAGCCTTaGCCACCAGGACGCTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPQWLQP*PPGRCR Trigger: TCTACAGCGTCCTGGTGGGCAAGGCTGCAGCCACTG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACACCAGCATCCTCAGTaGCCCTTTGGGGCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPHQHPQ*PFGAQH Trigger: GTGCTGTGCCCCAAAGGGCCACTGAGGATGCTGGTG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAAGTCTCCGTTGCCAGTaGCTGCAGCCTTGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPSLRCQ*LQPCPP Trigger: TGGTGGGCAAGGCTGCAGCCACTGGCAACGGAGACT...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | CCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACATCAGCCAGCCATGGATaGACTTGTAGCATCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: PPGSHNAPVPSDHPWRLTSASHG*TCSIDT Trigger: AGTATCGATGCTACAAGTTCATCCATGGCTGGCTGA...TGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCTTTTAGCTGCAGCGCTCCTTaGGAGGAGGGGTCCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GWLLLPHHEVNTTRFYSFSCSAP*EEGSSF Trigger: AAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCT...AAAAGAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | GTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACACGGGCTTGAAGGCTTCAGGGTATaGGGGTTCTCCAAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VTDITNTALGTFMTAHGLEGFRV*GFSKTV Trigger: GACAGTTTTGGAGAACCCTCATACCCTGAAGCCTTC...AAGCCCGTGTGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGGACGCTGTAGAAGATaGAGTCTCCCAGGCCGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPGRCRR*SLPGRA Trigger: AGCTCGGCCTGGGAGACTTCATCTTCTACAGCGTCC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAAGGCCAGAGTGTCCATaGAAGGGCGCACCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPRPECP*KGAPGC Trigger: ACAACCTGGTGCGCCCTTTCATGGACACTCTGGCCT...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR GCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAAGTGGATGCACACCATaGCCACTGCCCCGAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPSGCTP*PLPRSS Trigger: GGAACTTCGGGGCAGTGGGCATGGTGTGCATCCACT...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | GGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCTTTTCACCAGCATCCTCAGTaGCCCTTTGGGGCACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GWLLLPHHEVNTTRFYSFHQHPQ*PFGAQH Trigger: GTGCTGTGCCCCAAAGGGCCACTGAGGATGCTGGTG...AAAAGAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | GGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCTTTTAGGCCAGAGTGTCCATaGAAGGGCGCACCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWLLLPHHEVNTTRFYSFRPECP*KGAPGC Trigger: ACAACCTGGTGCGCCCTTTCATGGACACTCTGGCCT...AAAAGAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGGAGTCTTCCATCTCTaGGTCATAGGGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPGVFHL*VIGELQ Trigger: CTGCAGCTCCCCTATGACCCAGAGATGGAAGACTCC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111104.2 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACAGCCAGGAAGAGTGTaGGATAGTCCATGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPQPGRV*DSPWPH Trigger: ATGTGGCCATGGACTATCCCACACTCTTCCTGGCTG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CCA 90 bp | GGTTCTAAAGTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCACAGCCAGGAAGAGTGTaGGATAGTCCATGGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: GSKVTDITNTALGTFMTAQPGRV*DSPWPH Trigger: ATGTGGCCATGGACTATCCCACACTCTTCCTGGCTG...TGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTACTTTAGAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACCACCGTCCACACCATaGCAGATGAGTATATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPPPSTP*QMSISG Trigger: CCCTGATATACTCATCTGCCATGGTGTGGACGGTGG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGTCTTCTTCCATCTCTaGGTCATAGGGGAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPVFFHL*VIGELQ Trigger: CTGCAGCTCCCCTATGACCCAGAGATGGAAGAAGAC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000010753.14 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGAAGGCTTCAGGGTATaGGGGTTCTCCAAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPEGFRV*GFSKTV Trigger: GACAGTTTTGGAGAACCCTCATACCCTGAAGCCTTC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCATCAGCCAGCCATGGATaGACTTGTAGCATCGATACT | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPSASHG*TCSIDT Trigger: AGTATCGATGCTACAAGTTCATCCATGGCTGGCTGA...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACGAGGTAGATGTAGGTaGACAAGAAGAGGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KYMALECKTIHLHPVTPPRGRCR*TRRGAS Trigger: TGATGCTCCTCTTCTTGTTCACCTACATCTACCTCG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR TCA 90 bp | GGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCTTTTGAAGGCTTCAGGGTATaGGGGTTCTCCAAAACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GWLLLPHHEVNTTRFYSFEGFRV*GFSKTV Trigger: GACAGTTTTGGAGAACCCTCATACCCTGAAGCCTTC...AAAAGAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 90 bp | GAGTCCTCCACTGGGCAGTGCTCTCTCCATCCTCCGGGCCTGGCCTaGCTTCCTGGCAGGAGCGAGATGTGGGGCTCTCGGCTGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: ESSTGQCSLHPPGLA*LPGRSEMWGSRLTS Trigger: TGATGTCAGCCGAGAGCCCCACATCTCGCTCCTGCCAGGAAGGCAGGCCAGGCCCGGAGGATGGAGAGAGCACTGCCCAGTGGAGGACTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 90 bp | GGGTCAGCTCTTCCTCCAGGCCCGACGGTCGCCCAGGAGCCCCACTaGATGCGTAGCGGTCCGGGTCCTCTTCACAGTCTTCTTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSALPPGPTVAQEPH*MRSGPGPLHSLLRS Trigger: AGAGCGAAGAAGACTGTGAAGAGGACCCGGACCGCTACGCATGCAGTGGGGCTCCTGGGCGACCGTCGGGCCTGGAGGAAGAGCTGACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS TCA 90 bp | GCCTGGCCTGCCTTCCTGGCAGGAGCGAGATGTGGGGCTCTCGGCTaGCATCAAGGACGTCCGCTCATCACACACCTCTTCCTCGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AWPAFLAGARCGALG*HQGRPLITHLFLAV Trigger: GACAGCGAGGAAGAGGTGTGTGATGAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACATCTCGCTCCTGCCAGGAAGGCAGGCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 ENSMUST00000133340.2 |
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| CDS-3UTR CAA 90 bp | GGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCAGGAGGGGTCCAGCTTaGCCATGCCCACCGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: GLHPPQPAPHTTSSLKRRRRGPA*PCPPST Trigger: TGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCT...GCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS TCA 90 bp | CGTTGCCAGTGGCTGCAGCCTTGCCCACCAGGACGCTGTAGAAGATaGAGTCTCCCAGGCCGAGCTTCACGCCCCTTTCCTCCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RCQWLQPCPPGRCRR*SLPGRASRPFPPPP Trigger: AGGAGGAGGAGGAAAGGGGCGTGAAGCTCGGCCTGGGAGACTTCATCTTCTACAGCGTCCTGGTGGGCAAGGCTGCAGCCACTGGCAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGATCCTCAGTGGCCCTTaGGGGCACAGCACGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLILSGP*GHSTAT Trigger: CGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGAT...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 90 bp | AAGCCTGCTGCAGCACCAGAGGCCCCTTCCAGTGGATGCACACCATaGCCACTGCCCCGAAGTTCCAGACAGCCAGGAAGAGTGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KPAAAPEAPSSGCTP*PLPRSSRQPGRVWD Trigger: ATCCCACACTCTTCCTGGCTGTCTGGAACTTCGGGGCAGTGGGCATGGTGTGCATCCACTGGAAGGGGCCTCTGGTGCTGCAGCAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | ACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACGACCTCACACTCCGGCAGGTACTaGATGAACACCAGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TDVDRGLHPPQPAPHTTSHSGRY*MNTRAM Trigger: CATGGCCCTGGTGTTCATCAAGTACCTGCCGGAGTG...TGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | GCCACAGATGCTCCGACAGGCAAGCTGCAGTCTGGTGACAAGACAGGTAGCACCGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATDAPTGKLQSGDKTGSTELQRS*RGGVQL Trigger: AAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTC...GGTGCTACCTGTCTTGTCACCAGACTGCAGCTTGCCTGTCGGAGCATCTGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | CTGATCATCCCTGGAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIIPGDLQTWTGACILPNELQRS*RGGVQL Trigger: AAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTC...GTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTCCAGGGATGATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 90 bp | AGGGGAGCTGCAGCGCTCCTTGAGAGGAGGGGTCCAGCTTTGCCATaGCCACCGTCCACACCATGGCAGATGAGTATATCAGGGCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RGAAALLERRGPALP*PPSTPWQMSISGQE Trigger: TTCCTGCCCTGATATACTCATCTGCCATGGTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | GAGACTTACAGACGTGGACAGGGGCCTGCATCCTCCCCAACCTGCTCCACACACTGCTTCGCCCCATACTaGAGGGTCAGCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ETYRRGQGPASSPTCSTHCFAPY*RVSSSS Trigger: GGAGGAAGAGCTGACCCTCAAGTATGGGGCGAAGCA...GTGTGTGGAGCAGGTTGGGGAGGATGCAGGCCCCTGTCCACGTCTGTAAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | CTGCATCCTCCCCAACCTGCTCCACACACGACCTCATCCCTGAAGAGACGCTTGTGCTTCGCCCCATACTaGAGGGTCAGCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHPPQPAPHTTSSLKRRLCFAPY*RVSSSS Trigger: GGAGGAAGAGCTGACCCTCAAGTATGGGGCGAAGCA...CAAGCGTCTCTTCAGGGATGAGGTCGTGTGTGGAGCAGGTTGGGGAGGATGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGAAGGAGGGGTCCAGCTTaGCCATGCCCACCGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: MAPPGSHNAPVPSDHPWRRRGPA*PCPPST Trigger: TGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCT...TCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | ATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGAGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MAPPGSHNAPVPSDHPWRELQRS*RGGVQL Trigger: AAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTC...TCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | CCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAATCCTCAGTGGCCCTTaGGGGCACAGCACGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: PPGSHNAPVPSDHPWRLTILSGP*GHSTAT Trigger: CGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGAT...TGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | ATGGCGCCTCCTGGTTCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGATGCTTCGCCCCATACTaGAGGGTCAGCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MAPPGSHNAPVPSDHPWRCFAPY*RVSSSS Trigger: GGAGGAAGAGCTGACCCTCAAGTATGGGGCGAAGCA...TCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGAACCAGGAGGCGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | TCCCACAATGCACCTGTTCCTTCTGATCATCCCTGGAGACTTACAGACGTGGACCACTCCGGCAGGTACTaGATGAACACCAGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SHNAPVPSDHPWRLTDVDHSGRY*MNTRAM Trigger: CATGGCCCTGGTGTTCATCAAGTACCTGCCGGAGTG...GTCCACGTCTGTAAGTCTCCAGGGATGATCAGAAGGAACAGGTGCATTGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAATCCTCAGTGGCCCTTaGGGGCACAGCACGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: KYMALECKTIHLHPVTPPILSGP*GHSTAT Trigger: CGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGAT...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | GGTTCTAAAGTAACAGACATCACAAACACAGCACTGGGGACATTCATGACTGCAATCCTCAGTGGCCCTTaGGGGCACAGCACGGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: GSKVTDITNTALGTFMTAILSGP*GHSTAT Trigger: CGTGGCCGTGCTGTGCCCCAAAGGGCCACTGAGGAT...TGCAGTCATGAATGTCCCCAGTGCTGTGTTTGTGATGTCTGTTACTTTAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGTGTTAAGCACGGAGTaGAGGAGCCGCTGGCCCACC | + |
|
Preference number: 5 (lower is better) Translates to: KYMALECKTIHLHPVTPPVLSTE*RSRWPT Trigger: GGTGGGCCAGCGGCTCCTCAACTCCGTGCTTAACAC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAAGGAGGGGTCCAGCTTaGCCATGCCCACCGTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: KYMALECKTIHLHPVTPPRRGPA*PCPPST Trigger: TGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCT...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCAGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KYMALECKTIHLHPVTPPELQRS*RGGVQL Trigger: AAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTC...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | CGAAGGGTGGCTTCTGCTTCCTCATCACGAAGTAAACACGACACGTTTTTATTCCACTCCGGCAGGTACTaGATGAACACCAGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RRVASASSSRSKHDTFLFHSGRY*MNTRAM Trigger: CATGGCCCTGGTGTTCATCAAGTACCTGCCGGAGTG...GAATAAAAACGTGTCGTGTTTACTTCGTGATGAGGAAGCAGAAGCCACCCTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000010753.14 ENSMUST00000111106.8 ENSMUST00000111108.10 |
||
| CDS-3UTR CAA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCATGCTTCGCCCCATACTaGAGGGTCAGCTCTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: KYMALECKTIHLHPVTPPCFAPY*RVSSSS Trigger: GGAGGAAGAGCTGACCCTCAAGTATGGGGCGAAGCA...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS-3UTR CAA 90 bp | AAATATATGGCACTAGAGTGTAAAACTATACACCTGCATCCAGTGACGCCCCCACACTCCGGCAGGTACTaGATGAACACCAGGGCCATG | + |
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Preference number: 5 (lower is better) Translates to: KYMALECKTIHLHPVTPPHSGRY*MNTRAM Trigger: CATGGCCCTGGTGTTCATCAAGTACCTGCCGGAGTG...TGGGGGCGTCACTGGATGCAGGTGTATAGTTTTACACTCTAGTGCCATATATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 72 bp | CTCCAGGCCCGACGGTCGCCCAGGAGCCCCACTGCATaGGTAGCGGTCCGGGTCCTCTTCACAGTCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LQARRSPRSPTA*VAVRVLFTVFF Trigger: GAAGAAGACTGTGAAGAGGACCCGGACCGCTACGCATGCAGTGGGGCTCCTGGGCGACCGTCGGGCCTGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 72 bp | CTTCCTCCAGGCCCGACGGTCGCCCAGGAGCCCCACTaGATGCGTAGCGGTCCGGGTCCTCTTCACAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LPPGPTVAQEPH*MRSGPGPLHSL Trigger: AAGACTGTGAAGAGGACCCGGACCGCTACGCATGCAGTGGGGCTCCTGGGCGACCGTCGGGCCTGGAGGAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS CCA 72 bp | CCGGGCCTGGCCTGCCTTCCTGGCAGGAGCGAGATGTaGGGCTCTCGGCTGACATCAAGGACGTCCGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PGLACLPGRSEM*GSRLTSRTSAH Trigger: ATGAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACATCTCGCTCCTGCCAGGAAGGCAGGCCAGGCCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 ENSMUST00000133340.2 |
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| CDS CCA 72 bp | ATGATGAGGGTGTTAAGCACGGAGTTGAGGAGCCGCTaGCCCACCGAGGGCGTGTCCTCCGTGAAGGGCGTG | + |
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Preference number: 6 (lower is better) Translates to: MMRVLSTELRSR*PTEGVSSVKGV Trigger: CACGCCCTTCACGGAGGACACGCCCTCGGTGGGCCAGCGGCTCCTCAACTCCGTGCTTAACACCCTCATCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS GCA 72 bp | GCAGCACCAGAGGCCCCTTCCAGTGGATGCACACCATaGCCACTGCCCCGAAGTTCCAGACAGCCAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AAPEAPSSGCTP*PLPRSSRQPGR Trigger: TCTTCCTGGCTGTCTGGAACTTCGGGGCAGTGGGCATGGTGTGCATCCACTGGAAGGGGCCTCTGGTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS TCA 72 bp | GCCTTCCTGGCAGGAGCGAGATGTGGGGCTCTCGGCTaGCATCAAGGACGTCCGCTCATCACACACCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: AFLAGARCGALG*HQGRPLITHLF Trigger: GAAGAGGTGTGTGATGAGCGGACGTCCTTGATGTCAGCCGAGAGCCCCACATCTCGCTCCTGCCAGGAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 ENSMUST00000133340.2 |
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| CDS TCA 72 bp | TGGCTGCAGCCTTGCCCACCAGGACGCTGTAGAAGATaGAGTCTCCCAGGCCGAGCTTCACGCCCCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: WLQPCPPGRCRR*SLPGRASRPFP Trigger: AGGAAAGGGGCGTGAAGCTCGGCCTGGGAGACTTCATCTTCTACAGCGTCCTGGTGGGCAAGGCTGCAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS CAA 72 bp | TTCCATCTCTGGGTCATAGGGGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTTTGCCATGCCCACCGT | + |
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Preference number: 6 (lower is better) Translates to: FHLWVIGELQRS*RGGVQLCHAHR Trigger: ACGGTGGGCATGGCAAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTCCCCTATGACCCAGAGATGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS CAA 90 bp | GGTCATAGGGGAGCTGCAGCGCTCCTTGAGAGGAGGGGTCCAGCTTaGCCATGCCCACCGTCCACACCATGGCAGATGAGTATATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: GHRGAAALLERRGPA*PCPPSTPWQMSISG Trigger: CCCTGATATACTCATCTGCCATGGTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTCCCCTATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS CAA 90 bp | GGAGTCTTCTTCCATCTCTGGGTCATAGGGGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTTTGCCATGCCCACCGTCCACACCAT | + |
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Preference number: 6 (lower is better) Translates to: GVFFHLWVIGELQRS*RGGVQLCHAHRPHH Trigger: ATGGTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTCCCCTATGACCCAGAGATGGAAGAAGACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000010753.14 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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| CDS CAA 90 bp | GTAGGAGTCTTCCATCTCTGGGTCATAGGGGAGCTGCAGCGCTCCTaGAGAGGAGGGGTCCAGCTTTGCCATGCCCACCGTCCACACCAT | + |
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Preference number: 6 (lower is better) Translates to: VGVFHLWVIGELQRS*RGGVQLCHAHRPHH Trigger: ATGGTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCTCTCAAGGAGCGCTGCAGCTCCCCTATGACCCAGAGATGGAAGACTCCTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111104.2 |
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| CDS GCA 72 bp | GCAGCGCTCCTTGAGAGGAGGGGTCCAGCTTTGCCATaGCCACCGTCCACACCATGGCAGATGAGTATATCA | + |
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Preference number: 6 (lower is better) Translates to: AALLERRGPALP*PPSTPWQMSIS Trigger: TGATATACTCATCTGCCATGGTGTGGACGGTGGGCATGGCAAAGCTGGACCCCTCCTCTCAAGGAGCGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000010753.14 ENSMUST00000111104.2 ENSMUST00000111105.8 ENSMUST00000111106.8 ENSMUST00000111108.10 |
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