Pregenerated sensors for PSEN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019969Ensembl transcript IDs: ENSMUST00000041806.13, ENSMUST00000101225.2
Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCGGTGTCCTTATTTAAACTTACAAGTGGGCAGCAAAGGAGCCTaGGAGGGAGGCCCGGCCCAGTGCCACCTCCACACGGAACCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GRCPYLNLQVGSKGA*EGGPAQCHLHTEPP Trigger: AGGAGGTTCCGTGTGGAGGTGGCACTGGGCCGGGCCTCCCTCTCAGGCTCCTTTGCTGCCCACTTGTAAGTTTAAATAAGGACACCGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR GCA 90 bp | CCCCTGGGTTATTGGATACTAGCTACCTCCCAGAGCTGCCTTGTCTaGTGTCAGGGAACCGCTGTGGGGCAAGGGAGAGACAGGGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: PLGYWILATSQSCLV*CQGTAVGQGRDRER Trigger: CCTCTCCCTGTCTCTCCCTTGCCCCACAGCGGTTCCCTGACAGCAGACAAGGCAGCTCTGGGAGGTAGCTAGTATCCAATAACCCAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR TCA 90 bp | GGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCTaGGGACACAGGAAAGTCACCAGTCTCCTCCTCGGGCTTGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: GRKLQKSSWSPAFVS*GHRKVTSLLLGLAL Trigger: GAGAGCAAGCCCGAGGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR GCA 90 bp | ATGAGGAAACCCCTGGGTTATTGGATACTAGCTACCTCCCAGAGCTaGCTTGTCTGCTGTCAGGGAACCGCTGTGGGGCAAGGGAGAGAC | + |
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Preference number: 1 (lower is better) Translates to: MRKPLGYWILATSQS*LVCCQGTAVGQGRD Trigger: GTCTCTCCCTTGCCCCACAGCGGTTCCCTGACAGCAGACAAGGCAGCTCTGGGAGGTAGCTAGTATCCAATAACCCAGGGGTTTCCTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 90 bp | CCAGGACAGAGAGCGCTTCACCAGCCACTCATCGCTTTAATTCTTTaGGCACACATCCTATTTGCCATCGAAGGAGCTATGGCAGCCCGT | + |
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Preference number: 1 (lower is better) Translates to: PGQRALHQPLIALIL*AHILFAIEGAMAAR Trigger: ACGGGCTGCCATAGCTCCTTCGATGGCAAATAGGATGTGTGCCCAAAGAATTAAAGCGATGAGTGGCTGGTGAAGCGCTCTCTGTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101225.2 |
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| 3UTR GCA 90 bp | CACATTTCCTTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTaGTGCAGCGATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: HISLSLSLKSLRDTV*CSDGCWKPFSVDAS Trigger: GGAAGCGTCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGAAATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 90 bp | GAGGTTACAACTCTCAGGATAGAGCAACCCCAAATTCGTCCAGGCTaGCCTTGGGAAGAAACGGCAACCACAGATAATAGTGAGAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: EVTTLRIEQPQIRPG*PWEETATTDNSERV Trigger: AACTCTCTCACTATTATCTGTGGTTGCCGTTTCTTCCCAAGGCCAGCCTGGACGAATTTGGGGTTGCTCTATCCTGAGAGTTGTAACCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CAA 90 bp | CTAGCAGAGCACGGCAGCTCCTTGGCCCAGCACATTTCCTTGTCCTaGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGA | + |
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Preference number: 2 (lower is better) Translates to: LAEHGSSLAQHISLS*SLKSLRDTVCCSDG Trigger: TCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGAAATGTGCTGGGCCAAGGAGCTGCCGTGCTCTGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CAA 90 bp | TCAAAGCTAGCAGAGCACGGCAGCTCCTTGGCCCAGCACATTTCCTaGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: SKLAEHGSSLAQHIS*SLSLKSLRDTVCCS Trigger: GCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGAAATGTGCTGGGCCAAGGAGCTGCCGTGCTCTGCTAGCTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTGACTCGGAAGGAAGCTaGAGAAGTCCAGCTGGAGTC | + |
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Preference number: 2 (lower is better) Translates to: SQVTEGHRLLQRWMLETVDSEGS*RSPAGV Trigger: GACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTC...AACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGACAGGGGTGAGGTTTGTGTAGGGCGGTGTCCTTATTTAAACTTACAAGTGTCTCCTCCTCGGGCTTaGTCTCTGTTTTTGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: CDRGEVCVGRCPYLNLQVSPPRA*SLFLCF Trigger: AAAACACAAAAACAGAGAGCAAGCCCGAGGAGGAGA...CACTTGTAAGTTTAAATAAGGACACCGCCCTACACAAACCTCACCCCTGTCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGTTCACATCTCCTCCTCGGGCTTaGTCTCTGTTTTTGTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DGSSVWFTSLCLTFREFTSPPRA*SLFLCF Trigger: AAAACACAAAAACAGAGAGCAAGCCCGAGGAGGAGA...TGTGAACTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR CAA 90 bp | CCTGAGAGGGAGGCCCGGCCCAGTGCCACCTCCACACGGAACCTCCTGGACAGTGAGCACGGCAGCTCCTaGGCCCAGCACATTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: PEREARPSATSTRNLLDSEHGSS*AQHISL Trigger: CAAGGAAATGTGCTGGGCCAAGGAGCTGCCGTGCTC...ACTGTCCAGGAGGTTCCGTGTGGAGGTGGCACTGGGCCGGGCCTCCCTCTCAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR GCA 72 bp | CCCCTGGGTTATTGGATACTAGCTACCTCCCAGAGCTaGCTTGTCTGCTGTCAGGGAACCGCTGTGGGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PLGYWILATSQS*LVCCQGTAVGQ Trigger: TTGCCCCACAGCGGTTCCCTGACAGCAGACAAGGCAGCTCTGGGAGGTAGCTAGTATCCAATAACCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTCGTCCAGGCTGGCCTaGGGAAGAAACGGCAACCAC | + |
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Preference number: 3 (lower is better) Translates to: RERQGEEASRPEVSLECVSSRLA*GRNGNH Trigger: GTGGTTGCCGTTTCTTCCCAAGGCCAGCCTGGACGA...GACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR TCA 72 bp | CTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCTaGGGACACAGGAAAGTCACCAGTCTCCTCCTCGGG | + |
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Preference number: 3 (lower is better) Translates to: LQKSSWSPAFVS*GHRKVTSLLLG Trigger: CCCGAGGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGCTGGACTTCTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR CAA 90 bp | GAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTAAAATCGTCCAGGCTGGCCTaGGGAAGAAACGGCAACCAC | + |
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Preference number: 3 (lower is better) Translates to: ETGRGSIQARSKLRVCLKSSRLA*GRNGNH Trigger: GTGGTTGCCGTTTCTTCCCAAGGCCAGCCTGGACGA...TTTTAGACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR GCA 72 bp | TCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTaGAGCGATGGATGTTGGAAACCGTTCTCTGTAGAC | + |
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Preference number: 3 (lower is better) Translates to: SLSLKSLRDTVC*SDGCWKPFSVD Trigger: GTCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR CAA 90 bp | GATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGGCTGGAGTCCTGCCTTaGTTAGCTGAGGACACAGGA | + |
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Preference number: 3 (lower is better) Translates to: DGCWKPFSVDASFHSPVVAGVLP*LAEDTG Trigger: TCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGC...CACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACATCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGGAGCACGGCAGCTCCTaGGCCCAGCACATTTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: VEDGSSVWFTSLCLTFREEHGSS*AQHISL Trigger: CAAGGAAATGTGCTGGGCCAAGGAGCTGCCGTGCTC...CTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR GCA 72 bp | TTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTaGTGCAGCGATGGATGTTGGAAACCGTTCTCTGTA | + |
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Preference number: 3 (lower is better) Translates to: LSLSLKSLRDTV*CSDGCWKPFSV Trigger: TACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR TCA 72 bp | GTGAGAGAGTTTGAGAACAAAAGTGGTCAGAGTCACTaGTGTGACAGGGGTGAGGTTTGTGTAGGGCGGTGT | + |
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Preference number: 3 (lower is better) Translates to: VREFENKSGQSH*CDRGEVCVGRC Trigger: ACACCGCCCTACACAAACCTCACCCCTGTCACATCAGTGACTCTGACCACTTTTGTTCTCAAACTCTCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 72 bp | AGGATAGAGCAACCCCAAATTCGTCCAGGCTGGCCTTaGGAAGAAACGGCAACCACAGATAATAGTGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: RIEQPQIRPGWP*EETATTDNSER Trigger: TCTCTCACTATTATCTGTGGTTGCCGTTTCTTCCCAAGGCCAGCCTGGACGAATTTGGGGTTGCTCTATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 72 bp | ACTCTCAGGATAGAGCAACCCCAAATTCGTCCAGGCTaGCCTTGGGAAGAAACGGCAACCACAGATAATAGT | + |
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Preference number: 3 (lower is better) Translates to: TLRIEQPQIRPG*PWEETATTDNS Trigger: ACTATTATCTGTGGTTGCCGTTTCTTCCCAAGGCCAGCCTGGACGAATTTGGGGTTGCTCTATCCTGAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 72 bp | AGAGCGCTTCACCAGCCACTCATCGCTTTAATTCTTTaGGCACACATCCTATTTGCCATCGAAGGAGCTATG | + |
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Preference number: 3 (lower is better) Translates to: RALHQPLIALIL*AHILFAIEGAM Trigger: CATAGCTCCTTCGATGGCAAATAGGATGTGTGCCCAAAGAATTAAAGCGATGAGTGGCTGGTGAAGCGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101225.2 |
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| 3UTR CCA 72 bp | GGTTCAGCTAGGACGTGTTTTATTTCCAACATGGTGTaGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTT | + |
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Preference number: 3 (lower is better) Translates to: GSARTCFISNMV*KMAALFGSPHF Trigger: AAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCACACCATGTTGGAAATAAAACACGTCCTAGCTGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 72 bp | CTAGGACGTGTTTTATTTCCAACATGGTGTGGAAGATaGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: LGRVLFPTWCGR*QLCLVHLTLFN Trigger: GTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCACACCATGTTGGAAATAAAACACGTCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CCA 72 bp | AGTAAGCTTAGAGTGTGTCTAAAAGTGAGGAATTTGTaGGAAACCCAGAAGTCACTTAAGGATGACAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: SKLRVCLKVRNL*ETQKSLKDDRD Trigger: GTCCCTGTCATCCTTAAGTGACTTCTGGGTTTCCCACAAATTCCTCACTTTTAGACACACTCTAAGCTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR TCA 72 bp | GAAACCCAGAAGTCACTTAAGGATGACAGGGACTGTTaGGCAATAGATCCATCATTTCAAGAAAATATAAAC | + |
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Preference number: 3 (lower is better) Translates to: ETQKSLKDDRDC*AIDPSFQENIN Trigger: GTTTATATTTTCTTGAAATGATGGATCTATTGCTCAACAGTCCCTGTCATCCTTAAGTGACTTCTGGGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGGAGGCCCGGCCCAGTGCCACCTCCACACGGAACCTCCTGGACAGTTGCCTGTCATGCTGCTaGTGCCGTTCTTGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: PEREARPSATSTRNLLDSCLSCC*CRSWLS Trigger: TGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCA...ACTGTCCAGGAGGTTCCGTGTGGAGGTGGCACTGGGCCGGGCCTCCCTCTCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGGAGGCCCGGCCCAGTGCCACCTCCACACGGAACCTCCTGGACAGTGGGTTGTCAAGTCTCTaGCTGTCATGCTGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PEREARPSATSTRNLLDSGLSSL*LSCCCC Trigger: GCAGCAGCAGCATGACAGGCAGAGACTTGACAACCC...ACTGTCCAGGAGGTTCCGTGTGGAGGTGGCACTGGGCCGGGCCTCCCTCTCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGAGGGAGGCCCGGCCCAGTGCCACCTCCACACGGAACCTCCTGGACAGTATAATGAGATACGCCTaGTGCAGTCGAAGGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PEREARPSATSTRNLLDSIMRYA*CSRRGP Trigger: AGGCCCCCTTCGACTGCAGCAGGCGTATCTCATTAT...ACTGTCCAGGAGGTTCCGTGTGGAGGTGGCACTGGGCCGGGCCTCCCTCTCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| 3UTR CAA 72 bp | GCAGAGCACGGCAGCTCCTTGGCCCAGCACATTTCCTaGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTC | + |
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Preference number: 4 (lower is better) Translates to: AEHGSSLAQHIS*SLSLKSLRDTV Trigger: GACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGAAATGTGCTGGGCCAAGGAGCTGCCGTGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | AGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTTCCACCACCTGTCTTaGGTTACTCTGGGGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: RERQGEEASRPEVSLECVFHHLS*VTLGPP Trigger: GGGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAA...GACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGTCTCCTCCCCTCCCACTCCTCACTaGAGCCACCATCATCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGVLPLLAEDTGKSPVSSPPTPH*SHHHRS Trigger: GGAACGATGATGGTGGCTTCAGTGAGGAGTGGGAGG...GGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | TCCTTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGACCTCCCACTCCTCACTaGAGCCACCATCATCGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLSLSLKSLRDTVCCSDGPPTPH*SHHHRS Trigger: GGAACGATGATGGTGGCTTCAGTGAGGAGTGGGAGG...TCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | GCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGTCTCCTCCTCCACTGGCGGTTGCTaGGGCCTTACCAACCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: AGVLPLLAEDTGKSPVSSSTGGC*GLTNQN Trigger: GTTCTGGTTGGTAAGGCCTCAGCAACCGCCAGTGGA...GGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAAACACGAGCCCGAAGGTaGTGGAGATGGGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKTRARR*WRWGGL Trigger: CAGCCCTCCCCATCTCCATCACCTTCGGGCTCGTGT...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGTCTCCTCCTGCCTGTCATGCTGCTaGTGCCGTTCTTGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: AGVLPLLAEDTGKSPVSSCLSCC*CRSWLS Trigger: TGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCA...GGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | GCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGTCTCCTCCAGCCAAGATGAGCCATaGGGTCCATTCGGGGAGGTA | + |
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Preference number: 4 (lower is better) Translates to: AGVLPLLAEDTGKSPVSSSQDEP*GPFGEV Trigger: TACCTCCCCGAATGGACCGCATGGCTCATCTTGGCT...GGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTCTCTGTAGAATGGCGCTGCTGGAGTaGCTGTCCTCAGACATCTGG | + |
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Preference number: 4 (lower is better) Translates to: TEGHRLLQRWMLETVLCRMALLE*LSSDIW Trigger: CCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCAT...TCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | CTAGGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTTGTTCCAGTCTCCACTaGCGGTTGCTGAGGCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: LGRLGRKLQKSSWSPAFVCSSLH*RLLRPY Trigger: GTAAGGCCTCAGCAACCGCCAGTGGAGACTGGAACA...AACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | GATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGTTCCACCACCTGTCTTaGGTTACTCTGGGGCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: DGCWKPFSVDASFHSPVVFHHLS*VTLGPP Trigger: GGGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAA...CACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACATCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | GAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTAAAAACACGAGCCCGAAGGTaGTGGAGATGGGGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: ETGRGSIQARSKLRVCLKTRARR*WRWGGL Trigger: CAGCCCTCCCCATCTCCATCACCTTCGGGCTCGTGT...TTTTAGACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCGGCCTTTCCAGTGGATaGCAATCATCCCGACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RERQGEEASRPEVSLECVGLSSG*QSSRPH Trigger: GTGTGGTCGGGATGATTGCCATCCACTGGAAAGGCC...GACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTGGGCCTTTCCAGTGGATaGCAATCATCCCGACCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CWKPFSVDASFHSPVVRVGLSSG*QSSRPH Trigger: GTGTGGTCGGGATGATTGCCATCCACTGGAAAGGCC...CACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTGGTATAGAAGCTGACTaGTTTGATGGTGGCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGRLGRKLQKSSWSPAFVGIEAD*FDGGHD Trigger: GTCGTGGCCACCATCAAATCAGTCAGCTTCTATACC...AACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | TGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTGAAATCACAGCCAAGATaGGCCATGCGGTCCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CWKPFSVDASFHSPVVRVKSQPR*AMRSIR Trigger: CCGAATGGACCGCATGGCTCATCTTGGCTGTGATTT...CACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGGGTTGTCAAGTCTCTaGCTGTCATGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPAGVLPLLAEDTGKSPGLSSL*LSCCCC Trigger: GCAGCAGCAGCATGACAGGCAGAGACTTGACAACCC...TGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGCTGGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR GCA 90 bp | TCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTGCATTCAGGATCGAGTaGAGGGCTCTTTGGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: SQVTEGHRLLQRWMLETVAFRIE*RALWPT Trigger: TGTAGGCCAAAGAGCCCTGCACTCGATCCTGAATGC...AACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTCTCTGTAGACTCCCAGAAAGTTCCTaGACAGCAGCTCTTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: TEGHRLLQRWMLETVLCRLPESS*TAALDS Trigger: CGAGTCAAGAGCTGCTGTCCAGGAACTTTCTGGGAG...TCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAATGTTCCAGTCTCCACTaGCGGTTGCTGAGGCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKCSSLH*RLLRPY Trigger: GTAAGGCCTCAGCAACCGCCAGTGGAGACTGGAACA...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGCATTCAGGATCGAGTaGAGGGCTCTTTGGCCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RSPAGVLPLLAEDTGKSPAFRIE*RALWPT Trigger: TGTAGGCCAAAGAGCCCTGCACTCGATCCTGAATGC...TGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGCTGGACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTCTTCACTCGTTAGAATaGTCCCAGAAAGTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ARETRKEAAEVQLESCLCLHSLE*SQKVPG Trigger: TCCAGGAACTTTCTGGGAGCATTCTAACGAGTGAAG...ACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCCTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGAGTGCAGGGCTCTTTaGCCTACAGTCTCAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSPAGVLPLLAEDTGKSPECRAL*PTVSVS Trigger: AGACACTGAGACTGTAGGCCAAAGAGCCCTGCACTC...TGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGCTGGACTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAATTGGGTACCCTCCTTTaGGCTTCTGGGTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKLGTLL*ASGSPS Trigger: TGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAA...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAAGGTATAGAAGCTGACTaGTTTGATGGTGGCCACGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKGIEAD*FDGGHD Trigger: GTCGTGGCCACCATCAAATCAGTCAGCTTCTATACC...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | GATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGAAATCACAGCCAAGATaGGCCATGCGGTCCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DGCWKPFSVDASFHSPVVKSQPR*AMRSIR Trigger: CCGAATGGACCGCATGGCTCATCTTGGCTGTGATTT...CACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACATCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTCTGGCAACGCTTTCTTaGAAATGGCGAGCAGGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MLETVLCRRFLPQSSSAGLATLS*KWRAGV Trigger: TACTCCTGCTCGCCATTTTCAAGAAAGCGTTGCCAG...ACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTGCCGCCCATTAGATATTaGCTCAGGGTTGTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CWKPFSVDASFHSPVVRVPPIRY*LRVVKS Trigger: AGACTTGACAACCCTGAGCCAATATCTAATGGGCGG...CACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTCTCTGTAGATACGAAGTGGGCCTTTaGGACATAAAACAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TEGHRLLQRWMLETVLCRYEVGL*DIKQPP Trigger: TGGTGGCTGTTTTATGTCCCAAAGGCCCACTTCGTA...TCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | GATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGTTGGGTACCCTCCTTTaGGCTTCTGGGTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGCWKPFSVDASFHSPVVLGTLL*ASGSPS Trigger: TGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAA...CACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACATCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | GCTAGGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTCACCAAATCATATACTaGAATCACAGCCAAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARETRKEAAEVQLESCLCHQIIY*NHSQDE Trigger: CTCATCTTGGCTGTGATTTCAGTATATGATTTGGTG...ACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCCTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGAGTCTCATTTCTTTCCTaGGCTGTTTCAACCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLKSLRDTVCCSDGVSFLS*AVSTSI Trigger: TATGCTGGTTGAAACAGCTCAGGAAAGAAATGAGAC...TCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR TCA 90 bp | GTGGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGTCCACTGGCGGTTGCTaGGGCCTTACCAACCAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VEDGSSVWFTSLCLTFRESTGGC*GLTNQN Trigger: GTTCTGGTTGGTAAGGCCTCAGCAACCGCCAGTGGA...CTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | TGTGACAGGGGTGAGGTTTGTGTAGGGCGGTGTCCTTATTTAAACTTACAAGTGAGCCAAGATGAGCCATaGGGTCCATTCGGGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CDRGEVCVGRCPYLNLQVSQDEP*GPFGEV Trigger: TACCTCCCCGAATGGACCGCATGGCTCATCTTGGCT...CACTTGTAAGTTTAAATAAGGACACCGCCCTACACAAACCTCACCCCTGTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | GTGGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGATGGCGCTGCTGGAGTaGCTGTCCTCAGACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VEDGSSVWFTSLCLTFREMALLE*LSSDIW Trigger: CCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCAT...CTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CCA 90 bp | GAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTAAAACTCCCAGAAAGTTCCTaGACAGCAGCTCTTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: ETGRGSIQARSKLRVCLKLPESS*TAALDS Trigger: CGAGTCAAGAGCTGCTGTCCAGGAACTTTCTGGGAG...TTTTAGACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAATCTCAGTGTCTTCTGTaGATGGGGTGTAGATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKSQCLL*MGCRLA Trigger: AGCTAATCTACACCCCATTCACAGAAGACACTGAGA...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACAGCAACAACAGAGATaGAATAATAAGCCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKQQQQR*NNKPGV Trigger: CACGCCTGGCTTATTATTTCATCTCTGTTGTTGCTG...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | ATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTCAGCAACAACAGAGATaGAATAATAAGCCAGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: MLETVLCRRFLPQSSSAGQQQQR*NNKPGV Trigger: CACGCCTGGCTTATTATTTCATCTCTGTTGTTGCTG...ACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | GCAAGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTCATTTCTTTCCTaGGCTGTTTCAACCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ARERQGEEASRPEVSLECVSFLS*AVSTSI Trigger: TATGCTGGTTGAAACAGCTCAGGAAAGAAATGAGAC...ACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | AGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTCTCTGTAGACGCTATAAAACTGATGGAATaGAAGTTGGTCCATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RDTVCCSDGCWKPFSVDAIKLME*KLVHEG Trigger: CCCTTCATGGACCAACTTGCATTCCATCAGTTTTAT...AGCGTCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR TCA 90 bp | ACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTCTCTGTAGACACCAAATCATATACTaGAATCACAGCCAAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEGHRLLQRWMLETVLCRHQIIY*NHSQDE Trigger: CTCATCTTGGCTGTGATTTCAGTATATGATTTGGTG...TCTACAGAGAACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR GCA 90 bp | GTGGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGATAATGAGATACGCCTaGTGCAGTCGAAGGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VEDGSSVWFTSLCLTFREIMRYA*CSRRGP Trigger: AGGCCCCCTTCGACTGCAGCAGGCGTATCTCATTAT...CTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCATAAAACTGATGGAATaGAAGTTGGTCCATGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RERQGEEASRPEVSLECVIKLME*KLVHEG Trigger: CCCTTCATGGACCAACTTGCATTCCATCAGTTTTAT...GACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR GCA 90 bp | TGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTGAAGAGCATGATGACATaGTTGGCTCCATATTTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CWKPFSVDASFHSPVVRVKSMMT*LAPYFN Trigger: ATTGAAATATGGAGCCAAGCATGTCATCATGCTCTT...CACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | GTGGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGCCGCCCATTAGATATTaGCTCAGGGTTGTCAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VEDGSSVWFTSLCLTFREPPIRY*LRVVKS Trigger: AGACTTGACAACCCTGAGCCAATATCTAATGGGCGG...CTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CCA 90 bp | GATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGTTCACATACGAAGTGGGCCTTTaGGACATAAAACAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DGSSVWFTSLCLTFREFTYEVGL*DIKQPP Trigger: TGGTGGCTGTTTTATGTCCCAAAGGCCCACTTCGTA...TGTGAACTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| 3UTR CAA 72 bp | GAGGACACAGGAAAGTCACCAGTCTCCTCCTCGGGCTaGCTCTCTGTTTTTGTGTTTTTGATAATCAAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EDTGKSPVSSSG*LSVFVFLIIKE Trigger: TTCTTTGATTATCAAAAACACAAAAACAGAGAGCAAGCCCGAGGAGGAGACTGGTGACTTTCCTGTGTCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR GCA 90 bp | GATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGTTCACACTTCACTCGTTAGAATaGTCCCAGAAAGTTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGSSVWFTSLCLTFREFTLHSLE*SQKVPG Trigger: TCCAGGAACTTTCTGGGAGCATTCTAACGAGTGAAG...TGTGAACTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| 3UTR CAA 72 bp | AGAAGTAAGCTTAGAGTGTGTCTAAAAGTGAGGAATTaGTGGGAAACCCAGAAGTCACTTAAGGATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSKLRVCLKVRN*WETQKSLKDDR Trigger: CCTGTCATCCTTAAGTGACTTCTGGGTTTCCCACAAATTCCTCACTTTTAGACACACTCTAAGCTTACTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | CCTGAGAGGGAGGCCCGGCCCAGTGCCACCTCCACACGGAACCTCCTGGACAGTCTTGGGTACCCTCCTTaGGGCTTCTGGGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PEREARPSATSTRNLLDSLGYPP*GFWVSF Trigger: GAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAG...ACTGTCCAGGAGGTTCCGTGTGGAGGTGGCACTGGGCCGGGCCTCCCTCTCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 90 bp | GCTGCTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTaGTGGAGTGGCTGTCCTCAGACATCTGGGCATTCTGGAAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAAVLGCHSGSGWR*WSGCPQTSGHSGSR Trigger: CCTACTTCCAGAATGCCCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CCA 90 bp | GCTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTGCTaGAGTGGCTGTCCTCAGACATCTGGGCATTCTGGAAGTAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AAAVLGCHSGSGWRC*SGCPQTSGHSGSRT Trigger: TGTCCTACTTCCAGAATGCCCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CCA 90 bp | TGTCATGCTGCTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATaGCGCTGCTGGAGTGGCTGTCCTCAGACATCTGGGCATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: CHAAAAVLGCHSGSG*RCWSGCPQTSGHSG Trigger: TCCAGAATGCCCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 90 bp | GATATTGGCTCAGGGTTGTCAAGTCTCTGCCTGTCATGCTGCTGCTaGCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DIGSGLSSLCLSCCC*RSWLSFWLRMALLE Trigger: CTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGAGTTCCACCACCTGTCTaGAGTTACTCTGGGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLKSLRDTVCCSDGVPPPV*SYSGAA Trigger: GGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAAC...TCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGACCTGGACAGCAGCTCTaGACTCGGGAGTGGAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLKSLRDTVCCSDGPGQQL*TREWSD Trigger: ATCGCTCCACTCCCGAGTCAAGAGCTGCTGTCCAGG...TCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 90 bp | CGCCCATTAGATATTGGCTCAGGGTTGTCAAGTCTCTGCCTGTCATaGTGCTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPLDIGSGLSSLCLS*CCCRSWLSFWLRMA Trigger: CGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATCTAATGGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 90 bp | CTCTGGGGCCGCCCATTAGATATTGGCTCAGGGTTGTCAAGTCTCTaGCTGTCATGCTGCTGCTGCCGTTCTTGGCTGTCATTCTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWGRPLDIGSGLSSL*LSCCCCRSWLSFWL Trigger: GAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATCTAATGGGCGGCCCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | TCCTTGTCCTTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGACGAGTGCAGGGCTCTTaGGCCTACAGTCTCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLKSLRDTVCCSDGRVQGS*AYSLSV Trigger: GACACTGAGACTGTAGGCCAAAGAGCCCTGCACTCG...TCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAAGGACAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTCTTGGGTACCCTCCTTaGGGCTTCTGGGTCTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGRLGRKLQKSSWSPAFVLGYPP*GFWVSF Trigger: GAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAG...AACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTCCTGGACAGCAGCTCTaGACTCGGGAGTGGAGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: ARERQGEEASRPEVSLECPGQQL*TREWSD Trigger: ATCGCTCCACTCCCGAGTCAAGAGCTGCTGTCCAGG...ACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 90 bp | TTAGATATTGGCTCAGGGTTGTCAAGTCTCTGCCTGTCATGCTGCTaGTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LDIGSGLSSLCLSCC*CRSWLSFWLRMALL Trigger: CAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATCTAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 90 bp | CCATTAGATATTGGCTCAGGGTTGTCAAGTCTCTGCCTGTCATGCTaGTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLDIGSGLSSLCLSC*CCRSWLSFWLRMAL Trigger: CAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATCTAATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGTTCCACCACCTGTCTaGAGTTACTCTGGGGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSPAGVLPLLAEDTGKSPVPPPV*SYSGAA Trigger: GGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAAC...TGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGCTGGACTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTCGAGTGCAGGGCTCTTaGGCCTACAGTCTCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ARERQGEEASRPEVSLECRVQGS*AYSLSV Trigger: GACACTGAGACTGTAGGCCAAAGAGCCCTGCACTCG...ACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCGATATTGGCTCAGGGTaGTCAAGTCTCTGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GRLGRKLQKSSWSPAFVSDIGSG*SSLCLS Trigger: TGACAGGCAGAGACTTGACAACCCTGAGCCAATATC...GCTAACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | GGGAGACTCGGAAGGAAGCTGCAGAAGTCCAGCTGGAGTCCTGCCTTTGTTAGCATACGAAGTGGGCCTTaGGGACATAAAACAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: GRLGRKLQKSSWSPAFVSIRSGP*GHKTAT Trigger: GGTGGCTGTTTTATGTCCCAAAGGCCCACTTCGTAT...GCTAACAAAGGCAGGACTCCAGCTGGACTTCTGCAGCTTCCTTCCGAGTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS TCA 90 bp | GGATCGAGTGCAGGGCTCTTTGGCCTACAGTCTCAGTGTCTTCTGTaGATGGGGTGTAGATTAGCTGACCGTCCTTCCGGGTATAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSAGLFGLQSQCLL*MGCRLADRPSGYRS Trigger: GCTTCTATACCCGGAAGGACGGTCAGCTAATCTACACCCCATTCACAGAAGACACTGAGACTGTAGGCCAAAGAGCCCTGCACTCGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | GATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGAGTCTCCACTGGCGGTaGCTGAGGCCTTACCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: DGCWKPFSVDASFHSPVVSLHWR*LRPYQP Trigger: TGGTTGGTAAGGCCTCAGCAACCGCCAGTGGAGACT...CACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACATCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | TGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTGCTGATGGAATGCAAGTaGGTCCATGAAGGGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CWKPFSVDASFHSPVVRVLMECK*VHEGLH Trigger: GTGCAGCCCTTCATGGACCAACTTGCATTCCATCAG...CACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS TCA 90 bp | TGTCAGCTCTTCGTCTTCCTCCTCATCTTGTTCCACCACCTGTCTTaGGTTACTCTGGGGCCGCCCATTAGATATTGGCTCAGGGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CQLFVFLLILFHHLS*VTLGPPIRYWLRVV Trigger: GACAACCCTGAGCCAATATCTAATGGGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAACAAGATGAGGAGGAAGACGAAGAGCTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS GCA 90 bp | GTCCAAGTTTTACTCCTCTTTCCTCCGGGTCTTCACTCGTTAGAATaGTCCCAGAAAGTTCCTGGACAGCAGCTCTTGACTCGGGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: VQVLLLFPPGLHSLE*SQKVPGQQLLTREW Trigger: CCACTCCCGAGTCAAGAGCTGCTGTCCAGGAACTTTCTGGGAGCATTCTAACGAGTGAAGACCCGGAGGAAAGAGGAGTAAAACTTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 90 bp | TCGTCTTCCTCCTCATCTTGTTCCACCACCTGTCTTGAGTTACTCTaGGGCCGCCCATTAGATATTGGCTCAGGGTTGTCAAGTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSSCSTTCLELL*GRPLDIGSGLSSLC Trigger: GCAGAGACTTGACAACCCTGAGCCAATATCTAATGGGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAACAAGATGAGGAGGAAGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | TCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACCGTTGATATTGGCTCAGGGTaGTCAAGTCTCTGCCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SQVTEGHRLLQRWMLETVDIGSG*SSLCLS Trigger: TGACAGGCAGAGACTTGACAACCCTGAGCCAATATC...AACGGTTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS-3UTR CAA 90 bp | AGGGAGAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCATACGAAGTGGGCCTTaGGGACATAAAACAGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: RERQGEEASRPEVSLECVIRSGP*GHKTAT Trigger: GGTGGCTGTTTTATGTCCCAAAGGCCCACTTCGTAT...GACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | GAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTAAAAAGTCTCCACTGGCGGTaGCTGAGGCCTTACCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: ETGRGSIQARSKLRVCLKSLHWR*LRPYQP Trigger: TGGTTGGTAAGGCCTCAGCAACCGCCAGTGGAGACT...TTTTAGACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 90 bp | CCTGTGTCTCTCTCTCCGCTCTTTGTGTGTTATACTTGGGGTTCTTaGGTACCCTCCTTTGGGCTTCTGGGTCTCCTTCAGCCATATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVSLSPLFVCYTWGS*VPSFGLLGLLQPYS Trigger: TGAATATGGCTGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGAGAGAGAGACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | TGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCGGGTGCTTTGTGTGTTATACTaGGGGTTCTTGGGTACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: CWKPFSVDASFHSPVVRVLCVLY*GFLGTL Trigger: GAGGGTACCCAAGAACCCCAAGTATAACACACAAAG...CACCCGCACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 90 bp | TCCGCTCTTTGTGTGTTATACTTGGGGTTCTTGGGTACCCTCCTTTaGGCTTCTGGGTCTCCTTCAGCCATATTCACCAACCACACCATT | + |
|
Preference number: 5 (lower is better) Translates to: SALCVLYLGFLGTLL*ASGSPSAIFTNHTI Trigger: AATGGTGTGGTTGGTGAATATGGCTGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | GCTGGAGTCCTGCCTTTGTTAGCTGAGGACACAGGAAAGTCACCAGTCTCCTCCAGCATGATGACATGCTaGGCTCCATATTTCAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGVLPLLAEDTGKSPVSSSMMTC*APYFNV Trigger: GACATTGAAATATGGAGCCAAGCATGTCATCATGCT...GGAGGAGACTGGTGACTTTCCTGTGTCCTCAGCTAACAAAGGCAGGACTCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | GATGGATGTTGGAAACCGTTCTCTGTAGACGCTTCCTTCCACAGTCCAGTAGTGCATTCGGGGAGGTACTaGATAAATACCAGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: DGCWKPFSVDASFHSPVVHSGRY*INTRAM Trigger: CATGGCCCTGGTATTTATCAAGTACCTCCCCGAATG...CACTACTGGACTGTGGAAGGAAGCGTCTACAGAGAACGGTTTCCAACATCCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | TTGTCTCTCAAGTCACTGAGGGACACCGTCTGCTGCAGCGATGGATGTTGGAAACTTTGTGTGTTATACTaGGGGTTCTTGGGTACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LSLKSLRDTVCCSDGCWKLCVLY*GFLGTL Trigger: GAGGGTACCCAAGAACCCCAAGTATAACACACAAAG...TTTCCAACATCCATCGCTGCAGCAGACGGTGTCCCTCAGTGACTTGAGAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | GAGACAGGGAGAGGAAGCATCCAGGCCAGAAGTAAGCTTAGAGTGTGTCTAAAACTGATGGAATGCAAGTaGGTCCATGAAGGGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETGRGSIQARSKLRVCLKLMECK*VHEGLH Trigger: GTGCAGCCCTTCATGGACCAACTTGCATTCCATCAG...TTTTAGACACACTCTAAGCTTACTTCTGGCCTGGATGCTTCCTCTCCCTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS-3UTR CAA 90 bp | GTGGAAGATGGCAGCTCTGTTTGGTTCACCTCACTTTGTTTAACCTTTAGAGAGCATTCGGGGAGGTACTaGATAAATACCAGGGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VEDGSSVWFTSLCLTFREHSGRY*INTRAM Trigger: CATGGCCCTGGTATTTATCAAGTACCTCCCCGAATG...CTCTCTAAAGGTTAAACAAAGTGAGGTGAACCAAACAGAGCTGCCATCTTCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 72 bp | GCTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGGATaGCGCTGCTGGAGTGGCTGTCCTCAGACATCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AAAVLGCHSGSG*RCWSGCPQTSG Trigger: CCCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS GCA 72 bp | GCCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTaGTGGAGTGGCTGTCCTCAGACATCTGGGCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: AVLGCHSGSGWR*WSGCPQTSGHS Trigger: AGAATGCCCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 72 bp | TCAAGTCTCTGCCTGTCATGCTGCTGCTGCCGTTCTTaGCTGTCATTCTGGCTCCGGATGGCGCTGCTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SSLCLSCCCCRS*LSFWLRMALLE Trigger: CTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CAA 72 bp | GTCAAGTCTCTGCCTGTCATGCTGCTGCTGCCGTTCTaGGCTGTCATTCTGGCTCCGGATGGCGCTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VKSLPVMLLLPF*AVILAPDGAAG Trigger: TCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 72 bp | TCAGGGTTGTCAAGTCTCTGCCTGTCATGCTGCTGCTaGCGTTCTTGGCTGTCATTCTGGCTCCGGATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SGLSSLCLSCCC*RSWLSFWLRMA Trigger: CGCCATCCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CCA 72 bp | GTTCTTGGCTGTCATTCTGGCTCCGGATGGCGCTGCTaGAGTGGCTGTCCTCAGACATCTGGGCATTCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: VLGCHSGSGWRC*SGCPQTSGHSG Trigger: TCCAGAATGCCCAGATGTCTGAGGACAGCCACTCCAGCAGCGCCATCCGGAGCCAGAATGACAGCCAAGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 72 bp | ATTGGCTCAGGGTTGTCAAGTCTCTGCCTGTCATGCTaGTGCTGCCGTTCTTGGCTGTCATTCTGGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: IGSGLSSLCLSC*CCRSWLSFWLR Trigger: CCGGAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CAA 72 bp | TTAGAATGCTCCCAGAAAGTTCCTGGACAGCAGCTCTaGACTCGGGAGTGGAGCGATGAGGCCCCAGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: LECSQKVPGQQL*TREWSDEAPGD Trigger: GTCACCTGGGGCCTCATCGCTCCACTCCCGAGTCAAGAGCTGCTGTCCAGGAACTTTCTGGGAGCATTCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS TCA 72 bp | GCAGGGCTCTTTGGCCTACAGTCTCAGTGTCTTCTGTaGATGGGGTGTAGATTAGCTGACCGTCCTTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGLFGLQSQCLL*MGCRLADRPSG Trigger: CCCGGAAGGACGGTCAGCTAATCTACACCCCATTCACAGAAGACACTGAGACTGTAGGCCAAAGAGCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CAA 72 bp | TTACTCTGGGGCCGCCCATTAGATATTGGCTCAGGGTaGTCAAGTCTCTGCCTGTCATGCTGCTGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LLWGRPLDIGSG*SSLCLSCCCCR Trigger: ACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATCTAATGGGCGGCCCCAGAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CAA 90 bp | TGTCTTGAGTTACTCTGGGGCCGCCCATTAGATATTGGCTCAGGGTaGTCAAGTCTCTGCCTGTCATGCTGCTGCTGCCGTTCTTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CLELLWGRPLDIGSG*SSLCLSCCCCRSWL Trigger: CAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATCTAATGGGCGGCCCCAGAGTAACTCAAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CAA 90 bp | CTTCACTCGTTAGAATGCTCCCAGAAAGTTCCTGGACAGCAGCTCTaGACTCGGGAGTGGAGCGATGAGGCCCCAGGTGACTGTCTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: LHSLECSQKVPGQQL*TREWSDEAPGDCLF Trigger: AAAGAGACAGTCACCTGGGGCCTCATCGCTCCACTCCCGAGTCAAGAGCTGCTGTCCAGGAACTTTCTGGGAGCATTCTAACGAGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS GCA 72 bp | GATATTGGCTCAGGGTTGTCAAGTCTCTGCCTGTCATaGTGCTGCTGCCGTTCTTGGCTGTCATTCTGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: DIGSGLSSLCLS*CCCRSWLSFWL Trigger: GAGCCAGAATGACAGCCAAGAACGGCAGCAGCAGCATGACAGGCAGAGACTTGACAACCCTGAGCCAATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CCA 72 bp | ATGATGGCCGCATTCAGGATCGAGTGCAGGGCTCTTTaGCCTACAGTCTCAGTGTCTTCTGTGAATGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MMAAFRIECRAL*PTVSVSSVNGV Trigger: CACCCCATTCACAGAAGACACTGAGACTGTAGGCCAAAGAGCCCTGCACTCGATCCTGAATGCGGCCATCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CCA 72 bp | CTCTCTCCGCTCTTTGTGTGTTATACTTGGGGTTCTTaGGTACCCTCCTTTGGGCTTCTGGGTCTCCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSPLFVCYTWGS*VPSFGLLGLLQ Trigger: CTGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
||
| CDS CCA 72 bp | CCTGTGTCTCTCTCTCCGCTCTTTGTGTGTTATACTTaGGGTTCTTGGGTACCCTCCTTTGGGCTTCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: PVSLSPLFVCYT*GSWVPSFGLLG Trigger: ACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGAGAGAGAGACACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CAA 72 bp | TCCTGTGTCTCTCTCTCCGCTCTTTGTGTGTTATACTaGGGGTTCTTGGGTACCCTCCTTTGGGCTTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: SCVSLSALCVLY*GFLGTLLWASG Trigger: CCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGAGAGAGAGACACAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CAA 90 bp | CTCCGCTCTTTGTGTGTTATACTTGGGGTTCTTGGGTACCCTCCTTaGGGCTTCTGGGTCTCCTTCAGCCATATTCACCAACCACACCAT | + |
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Preference number: 6 (lower is better) Translates to: LRSLCVILGVLGYPP*GFWVSFSHIHQPHH Trigger: ATGGTGTGGTTGGTGAATATGGCTGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS TCA 72 bp | TTCGTCTTCCTCCTCATCTTGTTCCACCACCTGTCTTaGGTTACTCTGGGGCCGCCCATTAGATATTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: FVFLLILFHHLS*VTLGPPIRYWL Trigger: GAGCCAATATCTAATGGGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAACAAGATGAGGAGGAAGACGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS GCA 72 bp | ATGACACTGATCATGATGGCCGCATTCAGGATCGAGTaGAGGGCTCTTTGGCCTACAGTCTCAGTGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MTLIMMAAFRIE*RALWPTVSVSS Trigger: AGAAGACACTGAGACTGTAGGCCAAAGAGCCCTGCACTCGATCCTGAATGCGGCCATCATGATCAGTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 72 bp | TCCTCATCTTGTTCCACCACCTGTCTTGAGTTACTCTaGGGCCGCCCATTAGATATTGGCTCAGGGTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: SSSCSTTCLELL*GRPLDIGSGLS Trigger: TGACAACCCTGAGCCAATATCTAATGGGCGGCCCCAGAGTAACTCAAGACAGGTGGTGGAACAAGATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CAA 72 bp | TCTCTCTCCGCTCTTTGTGTGTTATACTTGGGGTTCTaGGGTACCCTCCTTTGGGCTTCTGGGTCTCCTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLSALCVLYLGF*GTLLWASGSPS Trigger: TGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAAAGAGCGGAGAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CCA 72 bp | TGTGTGTTATACTTGGGGTTCTTGGGTACCCTCCTTTaGGCTTCTGGGTCTCCTTCAGCCATATTCACCAAC | + |
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Preference number: 6 (lower is better) Translates to: CVLYLGFLGTLL*ASGSPSAIFTN Trigger: GTTGGTGAATATGGCTGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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| CDS CAA 72 bp | TTGTGTGTTATACTTGGGGTTCTTGGGTACCCTCCTTaGGGCTTCTGGGTCTCCTTCAGCCATATTCACCAA | + |
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Preference number: 6 (lower is better) Translates to: LCVILGVLGYPP*GFWVSFSHIHQ Trigger: TTGGTGAATATGGCTGAAGGAGACCCAGAAGCCCAAAGGAGGGTACCCAAGAACCCCAAGTATAACACACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041806.13 ENSMUST00000101225.2 |
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