RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PSD2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024347

Ensembl transcript IDs: ENSMUST00000115716.9, ENSMUST00000175734.2, ENSMUST00000176472.8, ENSMUST00000176873.8, ENSMUST00000177432.8

Found 617 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATGCAGAGGTATCCTTTGTGGCTTTGCTGCCAGTCACAGGCCCGTaGCCCAGGCTGAGGGCGGGGCTTGAGTGTGTTTTCCGGAGAGCT +
Preference number: 1 (lower is better)
Translates to: DAEVSFVALLPVTGP*PRLRAGLECVFRRA
Trigger: AGCTCTCCGGAAAACACACTCAAGCCCCGCCCTCAGCCTGGGCCACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR GCA 90 bp ACATCTCCATCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTaGCTGTTAACTGCCTGGAGCTCGGTCCAAGCAATCCCTGGCTGG +
Preference number: 1 (lower is better)
Translates to: TSPSPWAQGSPHPSG*LLTAWSSVQAIPGW
Trigger: CCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 90 bp GGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCAGCGTCATaGGTGACATCTCCATCTCCTTGGGCACAGGGCTCTCCACACCCC +
Preference number: 1 (lower is better)
Translates to: GSRPAMVQDARRSAS*VTSPSPWAQGSPHP
Trigger: GGGGTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 90 bp TCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTaGCTGGAGCTCGGTCCAAGCAATCCCTGGCTGGAATTGTGCTCA +
Preference number: 1 (lower is better)
Translates to: SLGTGLSTPLWLPVN*LELGPSNPWLELCS
Trigger: TGAGCACAATTCCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 90 bp AGTGACATCTCCATCTCCTTGGGCACAGGGCTCTCCACACCCCTCTaGTTGCCTGTTAACTGCCTGGAGCTCGGTCCAAGCAATCCCTGG +
Preference number: 1 (lower is better)
Translates to: SDISISLGTGLSTPL*LPVNCLELGPSNPW
Trigger: CCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 90 bp CTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGGCACAGGGCTCTCCACACCCCTCTG +
Preference number: 1 (lower is better)
Translates to: LGQRWSRMQEDQRHE*HLHLLGHRALHTPL
Trigger: CAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACCATCGCTGGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 90 bp CTCTGGTTGCCTGTTAACTGCCTGGAGCTCGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTGCCTGC +
Preference number: 1 (lower is better)
Translates to: LWLPVNCLELGPSNP*LELCSLTPLGTFAC
Trigger: GCAGGCAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 90 bp GGAGAAAGGGGACACACGCATGTGTGGAATCAGCTTGGCACTGAGTaGAGGTTAGGCCCCAGATTATTGCAACGTGAGGCAGGAGAACTG +
Preference number: 1 (lower is better)
Translates to: GERGHTHVWNQLGTE*RLGPRLLQREAGEL
Trigger: CAGTTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTCCACACATGCGTGTGTCCCCTTTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 90 bp TGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTaGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCC +
Preference number: 1 (lower is better)
Translates to: CQEVCAEGITGARRP*QYSQEDQKQTEVCP
Trigger: GGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 90 bp CCCTTCTATAGTAGCCAGCCGTGCCTCAATCCGCTCCAGGTCATCTaGGCCCACTTTGATTTTCACGGCCAGGAGGTGAATATAGGTCTC +
Preference number: 1 (lower is better)
Translates to: PFYSSQPCLNPLQVI*AHFDFHGQEVNIGL
Trigger: GAGACCTATATTCACCTCCTGGCCGTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGGATTGAGGCACGGCTGGCTACTATAGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR CCA 90 bp CCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTaGGAAAGAGCAACAGTGACAGACTTGTCCAGCTCTAGAGCATGT +
Preference number: 1 (lower is better)
Translates to: PHKYRTREEPDEKGA*ERATVTDLSSSRAC
Trigger: ACATGCTCTAGAGCTGGACAAGTCTGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 90 bp GCGTGTCTGAGGCTAAAGAACTTCACCTCTACTGTCCCCCACCCATaGCACAGAGAGTGGGACACTGGCTGGAAAATCAAAGGACTTTCA +
Preference number: 1 (lower is better)
Translates to: ACLRLKNFTSTVPHP*HREWDTGWKIKGLS
Trigger: TGAAAGTCCTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTCTTTAGCCTCAGACACGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 90 bp GCTTTTCTCAAAGGTGAGATAGTGTTCCTTCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCCTCTCTCCAGTGGGTGACACCTGTG +
Preference number: 1 (lower is better)
Translates to: AFLKGEIVFLQTVLF*FLRLEASLQWVTPV
Trigger: CACAGGTGTCACCCACTGGAGAGAGGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTGAAGGAACACTATCTCACCTTTGAGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR GCA 90 bp AATCAAAGGACTTTCAGGCAGCTGGACAAAGAACTGAGATCTCTTTaGTGCCCCCTAAATTGCCTTTCTGATCTCATTCAAACGAGCATT +
Preference number: 1 (lower is better)
Translates to: NQRTFRQLDKELRSL*CPLNCLSDLIQTSI
Trigger: AATGCTCGTTTGAATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTCCAGCTGCCTGAAAGTCCTTTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 90 bp TGGTTTCACCCTCTAGTCGGTAGTAGTTTCCAACCCTTCTTTAAATaGGTACTTTACATATATATATATATTGTGTGTGTGTGTGTGTGT +
Preference number: 1 (lower is better)
Translates to: WFHPLVGSSFQPFFK*VLYIYIYIVCVCVC
Trigger: ACACACACACACACACACAATATATATATATATGTAAAGTACTCATTTAAAGAAGGGTTGGAAACTACTACCGACTAGAGGGTGAAACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCGCATGTCTGGCCCCATaGCTGGAGGGCAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLACLAP*LEGSRA
Trigger: AGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGC...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCACCCTCTGGGGACATTTaGCTGCCTCTAGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSPSGDI*LPLGPA
Trigger: TGCAGGCCCTAGAGGCAGGCAAATGTCCCCAGAGGG...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGGCATGTCTGGCCCCATaGCTGGAGGGCAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLACLAP*LEGSRA
Trigger: AGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGC...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACGCATGTCTGGCCCCATaGCTGGAGGGCAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SFLTARRSVQRASLELGDACLAP*LEGSRA
Trigger: AGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGC...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCCAGTGTCAGAGCAGTaGAGGGCCCCCTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETPVSEQ*RAPCRL
Trigger: AAGCCTGCAGGGGGCCCTGCACTGCTCTGACACTGG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGCGCCCAGCCTGGGCTTaGCGGAGGATGACGCTCAGC +
Preference number: 2 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWRPAWA*RRMTLS
Trigger: GCTGAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCG...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGCATGTCTGGCCCCATaGCTGGAGGGCAGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLACLAP*LEGSRA
Trigger: AGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGC...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACGCTGAGGGCGGGGCTTaGGTGTGTTTTCCGGAGAGC +
Preference number: 2 (lower is better)
Translates to: SFLTARRSVQRASLELGDAEGGA*VCFPES
Trigger: GCTCTCCGGAAAACACACTCAAGCCCCGCCCTCAGC...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCCCTGGCTGGAATTGTaGTCACTGACCCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETPWLEL*SLTPLG
Trigger: CCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCCCAGTGTCAGAGCAGTaGAGGGCCCCCTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVPVSEQ*RAPCRL
Trigger: AAGCCTGCAGGGGGCCCTGCACTGCTCTGACACTGG...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCTGCCAGGAGGTCTGTaGAGAGGGCATCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETLPGGL*RGHHWS
Trigger: GCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGTCTGGCCCCATGACTaGAGGGCAGCAGGGCTAGGA +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVVWPHD*RAAGLG
Trigger: TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGAC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 90 bp GACATCTCCATCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTaGCCTGTTAACTGCCTGGAGCTCGGTCCAAGCAATCCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: DISISLGTGLSTPLW*PVNCLELGPSNPWL
Trigger: CAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTGGGACAGAGGAGGTaGCACACACGCAGGCATCCT +
Preference number: 2 (lower is better)
Translates to: SFLTARRSVQRASLELGDLGQRR*HTRRHP
Trigger: AGGATGCCTGCGTGTGTGTCACCTCCTCTGTCCCAG...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGCCCTCTGGGGACATTTaGCTGCCTCTAGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLPSGDI*LPLGPA
Trigger: TGCAGGCCCTAGAGGCAGGCAAATGTCCCCAGAGGG...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCCCTCTGGGGACATTTaGCTGCCTCTAGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLPSGDI*LPLGPA
Trigger: TGCAGGCCCTAGAGGCAGGCAAATGTCCCCAGAGGG...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCAGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSGPSNP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGTCTGGCCCCATGACTaGAGGGCAGCAGGGCTAGGA +
Preference number: 2 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIVWPHD*RAAGLG
Trigger: TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGAC...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGAGGCCTCTCTCCAGTaGGTGACACCTGTGCTCAGC +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVEASLQ*VTPVLS
Trigger: GCTGAGCACAGGTGTCACCCACTGGAGAGAGGCCTC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR TCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGAATCAGCTTGGCACTaGGTGGAGGTTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVESAWH*VEVRPQ
Trigger: CTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATACTGGGACAGAGGAGGTaGCACACACGCAGGCATCCT +
Preference number: 2 (lower is better)
Translates to: CNVRQENWAGCKGCWWSILGQRR*HTRRHP
Trigger: AGGATGCCTGCGTGTGTGTCACCTCCTCTGTCCCAG...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATACCCTGGCTGGAATTGTaGTCACTGACCCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIPWLEL*SLTPLG
Trigger: CCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGG...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCTGCCAGGAGGTCTGTaGAGAGGGCATCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLLPGGL*RGHHWS
Trigger: GCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGGTCTGGCCCCATGACTaGAGGGCAGCAGGGCTAGGA +
Preference number: 2 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEVWPHD*RAAGLG
Trigger: TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGAC...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGCTCTACCGCCCAGCCTaGGCTTGCCGGAGGATGACG +
Preference number: 2 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKLYRPA*ACRRMT
Trigger: CGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAG...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGTGGAATTGTGCTCACTaGCCCCTCTGGGGACATTTG +
Preference number: 2 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWWNCAH*PLWGHL
Trigger: CAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCA...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: YCQEVCAEGITGARRPWQDQRHE*HLHLLG
Trigger: CCCAAGGAGATGGAGATGTCACTCATGACGCTGATC...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGAGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGDQRHE*HLHLLG
Trigger: CCCAAGGAGATGGAGATGTCACTCATGACGCTGATC...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGAATCAGCTTGGCACTaGGTGGAGGTTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIESAWH*VEVRPQ
Trigger: CTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTC...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCTGGGACAGAGGAGGTaGCACACACGCAGGCATCCT +
Preference number: 2 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRALGQRR*HTRRHP
Trigger: AGGATGCCTGCGTGTGTGTCACCTCCTCTGTCCCAG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGTGGCGGCTACTAGGTTaGTCCTCAGGATCCAGGACA +
Preference number: 2 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEWRLLG*SSGSRT
Trigger: TGTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCA...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR TCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCTCAACTTATTCTCATaGGACCGCAGCTGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETLNLFS*DRSCSS
Trigger: GGAGGAGCAGCTGCGGTCTCATGAGAATAAGTTGAG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR GCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCCCTGGCTGGAATTGTaGTCACTGACCCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAPWLEL*SLTPLG
Trigger: CCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGCCAGTGTCAGAGCAGTaGAGGGCCCCCTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKPVSEQ*RAPCRL
Trigger: AAGCCTGCAGGGGGCCCTGCACTGCTCTGACACTGG...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACAAGCAAACAGAGGTGTaGCCCCAAGGCACTCAACCC +
Preference number: 2 (lower is better)
Translates to: SFLTARRSVQRASLELGDKQTEV*PQGTQP
Trigger: GGGTTGAGTGCCTTGGGGGCACACCTCTGTTTGCTT...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGATATCCTTTGTGGCTTTaGTGCCAGTCACAGGCCCGT +
Preference number: 2 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGYPLWL*CQSQAR
Trigger: ACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATA...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCACATCTCCATCTCCTTaGGCACAGGGCTCTCCACAC +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVTSPSP*AQGSPH
Trigger: GTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGT...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGGTCTAGGCCAGCGATaGTCCAGGATGCAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETGLGQR*SRMQED
Trigger: ATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGTGGAATTGTGCTCACTaGCCCCTCTGGGGACATTTG +
Preference number: 2 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLWNCAH*PLWGHL
Trigger: CAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCA...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGTGGAATTGTGCTCACTaGCCCCTCTGGGGACATTTG +
Preference number: 2 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLWNCAH*PLWGHL
Trigger: CAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCA...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGAATCAGCTTGGCACTaGGTGGAGGTTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKESAWH*VEVRPQ
Trigger: CTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCGCCCAGCCTGGGCTTaGCGGAGGATGACGCTCAGC +
Preference number: 2 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCARPAWA*RRMTLS
Trigger: GCTGAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGAAACTCCCAGCTCCCTaGATCAGATGGGAGTGGATT +
Preference number: 2 (lower is better)
Translates to: YCQEVCAEGITGARRPWQKLPAP*IRWEWI
Trigger: AATCCACTCCCATCTGATGCAGGGAGCTGGGAGTTT...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCAAACTCCCAGCTCCCTaGATCAGATGGGAGTGGATT +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETKLPAP*IRWEWI
Trigger: AATCCACTCCCATCTGATGCAGGGAGCTGGGAGTTT...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVGPSNP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEGPSNP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLGPSNP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGACATCTCCATCTCCTTaGGCACAGGGCTCTCCACAC +
Preference number: 2 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWTSPSP*AQGSPH
Trigger: GTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGT...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 90 bp TTAGGCCCCAGATTATTGCAACGTGAGGCAGGAGAACTGGGCCGGTaGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTG +
Preference number: 2 (lower is better)
Translates to: LGPRLLQREAGELGR*QRLLVVHRPAAGQL
Trigger: CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 90 bp GTGTGGAATCAGCTTGGCACTGAGTGGAGGTTAGGCCCCAGATTATaGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTG +
Preference number: 2 (lower is better)
Translates to: VWNQLGTEWRLGPRL*QREAGELGRLQRLL
Trigger: CAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIDQRHE*HLHLLG
Trigger: CCCAAGGAGATGGAGATGTCACTCATGACGCTGATC...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCAAGCAAACAGAGGTGTaGCCCCAAGGCACTCAACCC +
Preference number: 2 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAKQTEV*PQGTQP
Trigger: GGGTTGAGTGCCTTGGGGGCACACCTCTGTTTGCTT...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGCGCCCAGCCTGGGCTTaGCGGAGGATGACGCTCAGC +
Preference number: 2 (lower is better)
Translates to: TGARRPWQYSQEDQKQTERPAWA*RRMTLS
Trigger: GCTGAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCG...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGGAACACCCTCCAGTCTaGTGTCTTCAGCTTGAGCAC +
Preference number: 2 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWEHPPV*CLQLEH
Trigger: GTGCTCAAGCTGAAGACAGCAGACTGGAGGGTGTTC...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGGTCTAGGCCAGCGATaGTCCAGGATGCAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIGLGQR*SRMQED
Trigger: ATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACC...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGGATGAGAAGGGAGCCTaGGAAAGAGCAACAGTGACA +
Preference number: 2 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEDEKGA*ERATVT
Trigger: TGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATC...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACGATGAGAAGGGAGCCTaGGAAAGAGCAACAGTGACA +
Preference number: 2 (lower is better)
Translates to: SFLTARRSVQRASLELGDDEKGA*ERATVT
Trigger: TGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATC...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 90 bp CTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTaGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCC +
Preference number: 2 (lower is better)
Translates to: LPGGLCRGHHWSSET*AVFTRRSKANRGVP
Trigger: GGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFDQRHE*HLHLLG
Trigger: CCCAAGGAGATGGAGATGTCACTCATGACGCTGATC...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCC +
Preference number: 2 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLQTVLF*FLRLEA
Trigger: GGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGTCTAGGCCAGCGATaGTCCAGGATGCAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKGLGQR*SRMQED
Trigger: ATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCCCCTCTGGGGACATTTaGCTGCCTCTAGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPPSGDI*LPLGPA
Trigger: TGCAGGCCCTAGAGGCAGGCAAATGTCCCCAGAGGG...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCACCCTCTGGGGACATTTaGCTGCCTCTAGGGCCTGCA +
Preference number: 2 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSPSGDI*LPLGPA
Trigger: TGCAGGCCCTAGAGGCAGGCAAATGTCCCCAGAGGG...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCTGGCTGGAATTGTaGTCACTGACCCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAPWLEL*SLTPLG
Trigger: CCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACCCTGGCTGGAATTGTaGTCACTGACCCCTCTGGGG +
Preference number: 2 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKPWLEL*SLTPLG
Trigger: CCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTGCCAGGAGGTCTGTaGAGAGGGCATCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVLPGGL*RGHHWS
Trigger: GCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCTGCCAGGAGGTCTGTaGAGAGGGCATCACTGGAGC +
Preference number: 2 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCALPGGL*RGHHWS
Trigger: GCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTG +
Preference number: 2 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKGPSNP*LELCSL
Trigger: CAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGAAAGAGGAGAAAGGGTaGATAGCCAAGCTGAAATCC +
Preference number: 2 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLKEEKG*IAKLKS
Trigger: GGATTTCAGCTTGGCTATCCACCCTTTCTCCTCTTT...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGAGGGGCCAGATGGTTTaGTTATCAAACGCACTTCAG +
Preference number: 2 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLRGQMV*LSNALQ
Trigger: CTGAAGTGCGTTTGATAACCAAACCATCTGGCCCCT...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAGAATCAGCTTGGCACTaGGTGGAGGTTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSESAWH*VEVRPQ
Trigger: CTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTC...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCGAATCAGCTTGGCACTaGGTGGAGGTTAGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAESAWH*VEVRPQ
Trigger: CTGGGGCCTAACCTCCACTCAGTGCCAAGCTGATTC...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCCTGCTGTCTTCAGCTTaGGCACGTTGGACTTCTTAC +
Preference number: 2 (lower is better)
Translates to: GPGCKKISVMSDISISLGLLSSA*ARWTSY
Trigger: GTAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAG...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR GCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCTGCCTCTAGGGCCTaGACAGCCACACTAGCTAAG +
Preference number: 2 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAPASRA*TATLAK
Trigger: CTTAGCTAGTGTGGCTGTGCAGGCCCTAGAGGCAGG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGATGAGAAGGGAGCCTaGGAAAGAGCAACAGTGACA +
Preference number: 2 (lower is better)
Translates to: GPGCKKISVMSDISISLGDEKGA*ERATVT
Trigger: TGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGACTTCTTCATGGAGCTaGCGGCTGCTGGGAAGGCTG +
Preference number: 2 (lower is better)
Translates to: TGARRPWQYSQEDQKQTETSSWS*RLLGRL
Trigger: CAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGT...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR GCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCAGTGTCAGAGCAGTaGAGGGCCCCCTGCAGGCTT +
Preference number: 2 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAPVSEQ*RAPCRL
Trigger: AAGCCTGCAGGGGGCCCTGCACTGCTCTGACACTGG...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACAGTGTCCTTCCTTACTaGCAGGAGGTCTGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDSVLPY*QEVCAE
Trigger: CTCTGCACAGACCTCCTGGCAGTAAGGAAGGACACT...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGTGCTGCCCCCTAAATTaGCTTTCTGATCTCATTCAA +
Preference number: 2 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLCCPLN*LSDLIQ
Trigger: TTGAATGAGATCAGAAAGGCAATTTAGGGGGCAGCA...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAACATCTCCATCTCCTTaGGCACAGGGCTCTCCACAC +
Preference number: 2 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSTSPSP*AQGSPH
Trigger: GTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGT...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCAAAGAGGAGAAAGGGTaGATAGCCAAGCTGAAATCC +
Preference number: 2 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAKEEKG*IAKLKS
Trigger: GGATTTCAGCTTGGCTATCCACCCTTTCTCCTCTTT...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTCCAAAAGCATCAACTaGAAAAGTGATTGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETSKSIN*KSDCES
Trigger: TGACTCACAATCACTTTTCCAGTTGATGCTTTTGGA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCTGGAATTGTGCTCACTaGCCCCTCTGGGGACATTTG +
Preference number: 2 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAWNCAH*PLWGHL
Trigger: CAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCA...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGGAATTGTGCTCACTaGCCCCTCTGGGGACATTTG +
Preference number: 2 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPWNCAH*PLWGHL
Trigger: CAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCA...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCTGGGACAGAGGAGGTaGCACACACGCAGGCATCCT +
Preference number: 2 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPALGQRR*HTRRHP
Trigger: AGGATGCCTGCGTGTGTGTCACCTCCTCTGTCCCAG...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGGCTTTTCTCAAAGGTaGGATAGTGTTCCTTCAGAC +
Preference number: 2 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRGFSQR*DSVPSD
Trigger: GTCTGAAGGAACACTATCTCACCTTTGAGAAAAGCC...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR GCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGCTGAGATCTCTTTGCTaGCCCCTAAATTGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKLRSLC*PLNCLS
Trigger: AGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAG...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCTCCAAAAGCATCAACTaGAAAAGTGATTGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVSKSIN*KSDCES
Trigger: TGACTCACAATCACTTTTCCAGTTGATGCTTTTGGA...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACTCCAAAAGCATCAACTaGAAAAGTGATTGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: SFLTARRSVQRASLELGDSKSIN*KSDCES
Trigger: TGACTCACAATCACTTTTCCAGTTGATGCTTTTGGA...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGG +
Preference number: 2 (lower is better)
Translates to: TGARRPWQYSQEDQKQTEDQRHE*HLHLLG
Trigger: CCCAAGGAGATGGAGATGTCACTCATGACGCTGATC...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGGTCTAGGCCAGCGATaGTCCAGGATGCAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: TGARRPWQYSQEDQKQTEGLGQR*SRMQED
Trigger: ATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACC...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR GCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTAAGCAAACAGAGGTGTaGCCCCAAGGCACTCAACCC +
Preference number: 2 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIKQTEV*PQGTQP
Trigger: GGGTTGAGTGCCTTGGGGGCACACCTCTGTTTGCTT...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTACATCTCCATCTCCTTaGGCACAGGGCTCTCCACAC +
Preference number: 2 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPATSPSP*AQGSPH
Trigger: GTGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGT...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAAGGGGCCAGATGGTTTaGTTATCAAACGCACTTCAG +
Preference number: 2 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKRGQMV*LSNALQ
Trigger: CTGAAGTGCGTTTGATAACCAAACCATCTGGCCCCT...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCCAGAGGTATCCTTTGTaGCTTTGCTGCCAGTCACAG +
Preference number: 2 (lower is better)
Translates to: PVQSKSINWKSDCESQVSQRYPL*LCCQSQ
Trigger: CTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTG...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGAAAGAGGAGAAAGGGTaGATAGCCAAGCTGAAATCC +
Preference number: 2 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVKEEKG*IAKLKS
Trigger: GGATTTCAGCTTGGCTATCCACCCTTTCTCCTCTTT...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTGATGAGAAGGGAGCCTaGGAAAGAGCAACAGTGACA +
Preference number: 2 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPADEKGA*ERATVT
Trigger: TGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATC...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGTCCAAAAGCATCAACTaGAAAAGTGATTGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRSKSIN*KSDCES
Trigger: TGACTCACAATCACTTTTCCAGTTGATGCTTTTGGA...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTCCAAAAGCATCAACTaGAAAAGTGATTGTGAGTCA +
Preference number: 2 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVSKSIN*KSDCES
Trigger: TGACTCACAATCACTTTTCCAGTTGATGCTTTTGGA...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR TCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTCCTAAATTGCCTTTCTaGTCTCATTCAAACGAGCAT +
Preference number: 2 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIPKLPF*SHSNEH
Trigger: ATGCTCGTTTGAATGAGATCAGAAAGGCAATTTAGG...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp GTGTGCCCCCAAGGCACTCAACCCACAGGACACCCCTaGGACAGAGGAGGTGACACACACGCAGGCATCCTG +
Preference number: 3 (lower is better)
Translates to: VCPQGTQPTGHP*DRGGDTHAGIL
Trigger: CAGGATGCCTGCGTGTGTGTCACCTCCTCTGTCCCAGGGGTGTCCTGTGGGTTGAGTGCCTTGGGGGCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGGAGAACTGGGCCGGTaGCAAAGGTTGCTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETGELGR*QRLLVV
Trigger: GACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp TCCATCTCCTTGGGCACAGGGCTCTCCACACCCCTCTaGTTGCCTGTTAACTGCCTGGAGCTCGGTCCAAGC +
Preference number: 3 (lower is better)
Translates to: SISLGTGLSTPL*LPVNCLELGPS
Trigger: GCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCAATCCCTGGCTGGAATaGTGCTCACTGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLNPWLE*CSLTPL
Trigger: CAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATT...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGGAGAACTGGGCCGGTaGCAAAGGTTGCTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVGELGR*QRLLVV
Trigger: GACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp ACAGACTTGTCCAGCTCTAGAGCATGTCTGGCCCCATaGCTGGAGGGCAGCAGGGCTAGGAGAGGGTCTAGG +
Preference number: 3 (lower is better)
Translates to: TDLSSSRACLAP*LEGSRARRGSR
Trigger: CCTAGACCCTCTCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACAAGTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp CACTCAACCCACAGGACACCCCTGGGACAGAGGAGGTaGCACACACGCAGGCATCCTGTCCAGTCCAAAAGC +
Preference number: 3 (lower is better)
Translates to: HSTHRTPLGQRR*HTRRHPVQSKS
Trigger: GCTTTTGGACTGGACAGGATGCCTGCGTGTGTGTCACCTCCTCTGTCCCAGGGGTGTCCTGTGGGTTGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 72 bp ACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTaGCTGGAGCTCGGTCCAAGCAATCCCTGGCTGGAA +
Preference number: 3 (lower is better)
Translates to: TGLSTPLWLPVN*LELGPSNPWLE
Trigger: TTCCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 72 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTaGCTGTTAACTGCCTGGAGCTCGGTCCAAGCAATC +
Preference number: 3 (lower is better)
Translates to: SPWAQGSPHPSG*LLTAWSSVQAI
Trigger: GATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGGGAGAACTGGGCCGGTaGCAAAGGTTGCTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWGELGR*QRLLVV
Trigger: GACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCC...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGAACTGGGCCGGTaGCAAAGGTTGCTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKGELGR*QRLLVV
Trigger: GACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGATGGCGGCTACTAGGTaGATCCTCAGGATCCAGGAC +
Preference number: 3 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEMAATR*ILRIQD
Trigger: GTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCAT...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR TCA 72 bp AGGGCAGCAGGGGTCGACAAAACTTCTTCATGGAGCTaGCGGCTGCTGGGAAGGCTGGTGCTGAGAAGATGG +
Preference number: 3 (lower is better)
Translates to: RAAGVDKTSSWS*RLLGRLVLRRW
Trigger: CCATCTTCTCAGCACCAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGTTTTGTCGACCCCTGCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR TCA 72 bp TCTGCTTCCTTAGACTTGAGGCCTCTCTCCAGTGGGTaGCACCTGTGCTCAGCCAGCTCTGCAGTCACCTGC +
Preference number: 3 (lower is better)
Translates to: SASLDLRPLSSG*HLCSASSAVTC
Trigger: GCAGGTGACTGCAGAGCTGGCTGAGCACAGGTGTCACCCACTGGAGAGAGGCCTCAAGTCTAAGGAAGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR CCA 72 bp CCTGTTAACTGCCTGGAGCTCGGTCCAAGCAATCCCTaGCTGGAATTGTGCTCACTGACCCCTCTGGGGACA +
Preference number: 3 (lower is better)
Translates to: PVNCLELGPSNP*LELCSLTPLGT
Trigger: TGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp GGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTaGAGCTCGGTCCAAGCAATCCCTGGCTGGAATTGT +
Preference number: 3 (lower is better)
Translates to: GSPHPSGCLLTA*SSVQAIPGWNC
Trigger: ACAATTCCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGGACATCTCCATCTCCTaGGGCACAGGGCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEDISIS*GTGLST
Trigger: TGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTC...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCGACATCTCCATCTCCTaGGGCACAGGGCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRADISIS*GTGLST
Trigger: TGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTC...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGGGAGAACTGGGCCGGTaGCAAAGGTTGCTGGTGGTC +
Preference number: 3 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKGELGR*QRLLVV
Trigger: GACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCC...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGATTAGGCCCCAGATTATaGCAACGTGAGGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGLGPRL*QREAGE
Trigger: TTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAA...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp CAGGGGATGAAAGGAGAAAGGGGACACACGCATGTGTaGAATCAGCTTGGCACTGAGTGGAGGTTAGGCCCC +
Preference number: 3 (lower is better)
Translates to: QGMKGERGHTHV*NQLGTEWRLGP
Trigger: GGGGCCTAACCTCCACTCAGTGCCAAGCTGATTCCACACATGCGTGTGTCCCCTTTCTCCTTTCATCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCAATCCCTGGCTGGAATaGTGCTCACTGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRANPWLE*CSLTPL
Trigger: CAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATT...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGAATCCCTGGCTGGAATaGTGCTCACTGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKNPWLE*CSLTPL
Trigger: CAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATT...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp CGATGGTCCAGGATGCAAGAAGATCAGCGTCATGAGTaGCATCTCCATCTCCTTGGGCACAGGGCTCTCCAC +
Preference number: 3 (lower is better)
Translates to: RWSRMQEDQRHE*HLHLLGHRALH
Trigger: GTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp CCAGCGATGGTCCAGGATGCAAGAAGATCAGCGTCATaGGTGACATCTCCATCTCCTTGGGCACAGGGCTCT +
Preference number: 3 (lower is better)
Translates to: PAMVQDARRSAS*VTSPSPWAQGS
Trigger: AGAGCCCTGTGCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACCATCGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp AGCCTGATGAGAAGGGAGCCTGGGAAAGAGCAACAGTaGCAGACTTGTCCAGCTCTAGAGCATGTCTGGCCC +
Preference number: 3 (lower is better)
Translates to: SLMRREPGKEQQ*QTCPALEHVWP
Trigger: GGGCCAGACATGCTCTAGAGCTGGACAAGTCTGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp AGTAGCCAGCCGTGCCTCAATCCGCTCCAGGTCATCTaGGCCCACTTTGATTTTCACGGCCAGGAGGTGAAT +
Preference number: 3 (lower is better)
Translates to: SSQPCLNPLQVI*AHFDFHGQEVN
Trigger: ATTCACCTCCTGGCCGTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGGATTGAGGCACGGCTGGCTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR CCA 72 bp TACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTaGGAAAGAGCAACAGTGACAGACTTGTCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: YRTREEPDEKGA*ERATVTDLSSS
Trigger: AGAGCTGGACAAGTCTGTCACTGTTGCTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp ACACTAGCTAAGTATCAGATGCAGAGGTATCCTTTGTaGCTTTGCTGCCAGTCACAGGCCCGTGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: TLAKYQMQRYPL*LCCQSQARGPG
Trigger: GCCTGGGCCACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTGCATCTGATACTTAGCTAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CAA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGAATCCCTGGCTGGAATaGTGCTCACTGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKNPWLE*CSLTPL
Trigger: CAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATT...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGTTAGGCCCCAGATTATaGCAACGTGAGGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLLGPRL*QREAGE
Trigger: TTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAA...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp GGGGGCCTATCCCCGAGACTCACTTGTTGCTCTAAGTaGTGCGGTGTTCAAAGGATGTCAACCCGTGAGAGA +
Preference number: 3 (lower is better)
Translates to: GGLSPRLTCCSK*CGVQRMSTRER
Trigger: TCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAGAGCAACAAGTGAGTCTCGGGGATAGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp GGAAGGCTGGTGCTGAGAAGATGGCGGCTACTAGGTTaGTCCTCAGGATCCAGGACAACATCTCTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: GRLVLRRWRLLG*SSGSRTTSLPC
Trigger: GCAAGGAAGAGATGTTGTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCATCTTCTCAGCACCAGCCTTCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR CCA 72 bp TCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTaGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGA +
Preference number: 3 (lower is better)
Translates to: SLLPGGLCRGHH*SSETLAVFTRR
Trigger: TCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp AAGACTGCAAACCGTTGGCCAAACAATAGGCAAGATTaGCTCGTGGTAGCTGTGTCAAGGGGGCCTATCCCC +
Preference number: 3 (lower is better)
Translates to: KTANRWPNNRQD*LVVAVSRGPIP
Trigger: GGGGATAGGCCCCCTTGACACAGCTACCACGAGCCAATCTTGCCTATTGTTTGGCCAACGGTTTGCAGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACAATCCCTGGCTGGAATaGTGCTCACTGACCCCTCTG +
Preference number: 3 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDNPWLE*CSLTPL
Trigger: CAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATT...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCGACATCTCCATCTCCTaGGGCACAGGGCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPDISIS*GTGLST
Trigger: TGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTC...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGTTAGGCCCCAGATTATaGCAACGTGAGGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRLGPRL*QREAGE
Trigger: TTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAA...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGACATCTCCATCTCCTaGGGCACAGGGCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: TGARRPWQYSQEDQKQTEDISIS*GTGLST
Trigger: TGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTC...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTCCAATTTAAGCAATTaGGATTTCAACCCCACTACA +
Preference number: 3 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETSNLSN*DFNPTT
Trigger: TGTAGTGGGGTTGAAATCCAAATTGCTTAAATTGGA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCATTCAAACGAGCATTaGTTTCCCCTGAGCAAAACA +
Preference number: 3 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLHSNEH*FPLSKT
Trigger: TGTTTTGCTCAGGGGAAACAAATGCTCGTTTGAATG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCGACAACATCTCTTCCTaGCTCGGTGCCTGGAAGAGG +
Preference number: 3 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCADNISS*LGAWKR
Trigger: CCTCTTCCAGGCACCGAGCAAGGAAGAGATGTTGTC...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR TCA 72 bp GTGCCTCAATCCGCTCCAGGTCATCTGAGCCCACTTTaGTTTTCACGGCCAGGAGGTGAATATAGGTCTCAT +
Preference number: 3 (lower is better)
Translates to: VPQSAPGHLSPL*FSRPGGEYRSH
Trigger: ATGAGACCTATATTCACCTCCTGGCCGTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGGATTGAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR CCA 72 bp GCAGGCCAGGCTCCAAGTCAGGAGTTTTCCTTTTTCTaGTTTCACCCTCTAGTCGGTAGTAGTTTCCAACCC +
Preference number: 3 (lower is better)
Translates to: AGQAPSQEFSFF*FHPLVGSSFQP
Trigger: GGGTTGGAAACTACTACCGACTAGAGGGTGAAACCAGAAAAAGGAAAACTCCTGACTTGGAGCCTGGCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGTCACTAATCAAAACCTaGTCACTCTACCTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKSLIKT*SLYLLP
Trigger: GGGGAGAAGGTAGAGTGACAAGGTTTTGATTAGTGA...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp AGGCTAAAGAACTTCACCTCTACTGTCCCCCACCCATaGCACAGAGAGTGGGACACTGGCTGGAAAATCAAA +
Preference number: 3 (lower is better)
Translates to: RLKNFTSTVPHP*HREWDTGWKIK
Trigger: TTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTCTTTAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 72 bp AAAGGTGAGATAGTGTTCCTTCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCCTCTCTCCAGTGGGTG +
Preference number: 3 (lower is better)
Translates to: KGEIVFLQTVLF*FLRLEASLQWV
Trigger: CACCCACTGGAGAGAGGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTGAAGGAACACTATCTCACCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CAA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTGACATCTCCATCTCCTaGGGCACAGGGCTCTCCACA +
Preference number: 3 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPADISIS*GTGLST
Trigger: TGTGGAGAGCCCTGTGCCCAAGGAGATGGAGATGTC...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCTTAGGCCCCAGATTATaGCAACGTGAGGCAGGAGAA +
Preference number: 3 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCALGPRL*QREAGE
Trigger: TTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAA...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CCA 72 bp ACACGCAGGCATCCTGTCCAGTCCAAAAGCATCAACTaGAAAAGTGATTGTGAGTCACAAGTCAGCCGGAAA +
Preference number: 3 (lower is better)
Translates to: TRRHPVQSKSIN*KSDCESQVSRK
Trigger: TTTCCGGCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGGATGCCTGCGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCTCTGCTGTCTTCAGCTaGAGCACGTTGGACTTCTTA +
Preference number: 3 (lower is better)
Translates to: PVQSKSINWKSDCESQVSSAVFS*STLDFL
Trigger: TAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAGA...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
3UTR-3UTR CAA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTTAGGCTTTCTGATTaGCTAGGAAAAGGAAAGGAT +
Preference number: 3 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVLRLSD*LGKGKD
Trigger: ATCCTTTCCTTTTCCTAGCAAATCAGAAAGCCTAAG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCTTAGGCTTTCTGATTaGCTAGGAAAAGGAAAGGAT +
Preference number: 3 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCALRLSD*LGKGKD
Trigger: ATCCTTTCCTTTTCCTAGCAAATCAGAAAGCCTAAG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 72 bp ACTTTCAGGCAGCTGGACAAAGAACTGAGATCTCTTTaGTGCCCCCTAAATTGCCTTTCTGATCTCATTCAA +
Preference number: 3 (lower is better)
Translates to: TFRQLDKELRSL*CPLNCLSDLIQ
Trigger: TTGAATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTCCAGCTGCCTGAAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTTCACTAATCAAAACCTaGTCACTCTACCTTCTCCCC +
Preference number: 3 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPASLIKT*SLYLLP
Trigger: GGGGAGAAGGTAGAGTGACAAGGTTTTGATTAGTGA...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR-3UTR CAA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAATCCAATTTAAGCAATTaGGATTTCAACCCCACTACA +
Preference number: 3 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKSNLSN*DFNPTT
Trigger: TGTAGTGGGGTTGAAATCCAAATTGCTTAAATTGGA...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR TCA 72 bp AAACTCCCAGCTCCCTGCATCAGATGGGAGTGGATTTaGAGTGATAAGCACTTAGTTGCAAAGATTATGTCA +
Preference number: 3 (lower is better)
Translates to: KLPAPCIRWEWI*SDKHLVAKIMS
Trigger: TGACATAATCTTTGCAACTAAGTGCTTATCACTTCAAATCCACTCCCATCTGATGCAGGGAGCTGGGAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR GCA 72 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTaGCTTTCTGATCTCATTCAAACGAGCATTTGTTTC +
Preference number: 3 (lower is better)
Translates to: DKELRSLCCPLN*LSDLIQTSICF
Trigger: GAAACAAATGCTCGTTTGAATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACTGCGAGCGGCTTCGCTaGCCCCCTGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDCERLR*PPGTRW
Trigger: CCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCA...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCATGGCCAGTGGATCTGTaGTGCCAGGCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSWPVDL*CQAPAP
Trigger: AGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCA...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGGCCCAGGCTGAGGGCGGGGCTTGAGTGTGTTTTCCGGAGAGCTGGGTCATCCGGTCTTCTCACCGCCTaGGCCGCTGATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: WPRLRAGLECVFRRAGSSGLLTA*AADVAA
Trigger: AGCAGCCACATCAGCGGCCCAGGCGGTGAGAAGACC...GGATGACCCAGCTCTCCGGAAAACACACTCAAGCCCCGCCCTCAGCCTGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
CDS-3UTR TCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGCACCGCCTGGGCCGCTaGTGTGGCTGCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLHRLGR*CGCSGL
Trigger: AAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTG...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCATGCGAGCGGCTTCGCTaGCCCCCTGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSCERLR*PPGTRW
Trigger: CCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCA...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCAGCATCAGGGCGCAGGTaGGCGTGTGGATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSASGRR*ACGSHL
Trigger: AAGATGGGATCCACACGCTCACCTGCGCCCTGATGC...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGTCGGGCTCCAGGCCGTaGTCCTCCTGGGTAGCACTC +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWSGSRP*SSWVAL
Trigger: GAGTGCTACCCAGGAGGACCACGGCCTGGAGCCCGA...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCATCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSSRLLY*VPRSSS
Trigger: GGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGA...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACCCCCTGGCACCCGTTaGCCAGTGGATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGPPGTR*PVDLCC
Trigger: GCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGCTTCGCTGACCCCCTaGCACCCGTTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETASLTP*HPLASG
Trigger: TCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGCTGAGGGCGGGGCTTaGGTGTGTTTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETAEGGA*VCFPES
Trigger: GCTCTCCGGAAAACACACTCAAGCCCCGCCCTCAGC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCTCGGGCTCCAGGCCGTaGTCCTCCTGGGTAGCACTC +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVSGSRP*SSWVAL
Trigger: GAGTGCTACCCAGGAGGACCACGGCCTGGAGCCCGA...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGGTCTTCTCACCGCCTaGGCCGCTGATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETGLLTA*AADVAA
Trigger: AGCAGCCACATCAGCGGCCCAGGCGGTGAGAAGACC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGAGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGAPVGQ*ICAARL
Trigger: GAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGC...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCCCCCCTGGCACCCGTTaGCCAGTGGATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVPPGTR*PVDLCC
Trigger: GCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGG...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGCACCGCCTGGGCCGCTaGTGTGGCTGCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKHRLGR*CGCSGL
Trigger: AAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTG...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGCACCGCCTGGGCCGCTaGTGTGGCTGCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEHRLGR*CGCSGL
Trigger: AAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTG...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCTCTCTCCAGTGGGTaGCACCTGTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SFLTARRSVQRASLELGDPLSSG*HLCSAS
Trigger: GCTGGCTGAGCACAGGTGTCACCCACTGGAGAGAGG...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGQAFAG*CSILEP
Trigger: GGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQQAFAG*CSILEP
Trigger: GGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGCAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWQAFAG*CSILEP
Trigger: GGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTG...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETQAFAG*CSILEP
Trigger: GGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATATCGGGCTCCAGGCCGTaGTCCTCCTGGGTAGCACTC +
Preference number: 4 (lower is better)
Translates to: CNVRQENWAGCKGCWWSISGSRP*SSWVAL
Trigger: GAGTGCTACCCAGGAGGACCACGGCCTGGAGCCCGA...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCGCTGCTGTTCCATTCTaGAGCCCAGGCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLAAVPF*SPGSSS
Trigger: CGAAGAGGAGCCTGGGCTCCAGAATGGAACAGCAGC...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCATGCTCAGGCCTTCGCTaGCTGCTGTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSCSGLR*LLFHSG
Trigger: TCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCA...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGGGTCTTCTCACCGCCTaGGCCGCTGATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLGLLTA*AADVAA
Trigger: AGCAGCCACATCAGCGGCCCAGGCGGTGAGAAGACC...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAGGGGTCGACAAAACTTCTTCATGGAGCTGACGGCTGCTGGGAAGGCTGGTGCAGGGTCCCCAGCATCTaGACAGGGACTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: QGSTKLLHGADGCWEGWCRVPSI*TGTPRD
Trigger: GTCCCTGGGAGTCCCTGTCCAGATGCTGGGGACCCT...GCACCAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGTTTTGTCGACCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
CDS-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETSRLLY*VPRSSS
Trigger: GGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDAPVGQ*ICAARL
Trigger: GAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGC...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SFLTARRSVQRASLELGDAPVGQ*ICAARL
Trigger: GAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGC...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACATTGGGCACCGAGGTaGGAGACAGGTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGHWAPR*ETGGSR
Trigger: TCTTGAGCCACCTGTCTCTCACCTCGGTGCCCAATG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGCATCAGGGCGCAGGTaGGCGTGTGGATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVASGRR*ACGSHL
Trigger: AAGATGGGATCCACACGCTCACCTGCGCCCTGATGC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGCATGCAGGTCTGTGTTaGGCAGCATCAGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEHAGLC*AASGRR
Trigger: CCTGCGCCCTGATGCTGCTCAACACAGACCTGCATG...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCCATCCATGTCCGCATaGGTCTTCCGGGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLPSMSA*VFRVST
Trigger: CGTGCTGACCCGGAAGACTCATGCGGACATGGATGG...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
CDS-3UTR TCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCATCCATGTCCGCATaGGTCTTCCGGGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: SFLTARRSVQRASLELGDPSMSA*VFRVST
Trigger: CGTGCTGACCCGGAAGACTCATGCGGACATGGATGG...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
CDS-3UTR TCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGCTGAGGGCGGGGCTTaGGTGTGTTTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLAEGGA*VCFPES
Trigger: GCTCTCCGGAAAACACACTCAAGCCCCGCCCTCAGC...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCATCACAACCACCAGTTaGCCCCAGATCCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLITTTS*PQIPFR
Trigger: CCTGAAGGGGATCTGGGGGCAACTGGTGGTTGTGAT...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCATGGCCAGTGGATCTGTaGTGCCAGGCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSWPVDL*CQAPAP
Trigger: AGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCA...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGTGGCCAGTGGATCTGTaGTGCCAGGCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWWPVDL*CQAPAP
Trigger: AGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCA...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCTGCTCAGGCCTTCGCTaGCTGCTGTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLCSGLR*LLFHSG
Trigger: TCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCA...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGGTCTTCTCACCGCCTaGGCCGCTGATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLGLLTA*AADVAA
Trigger: AGCAGCCACATCAGCGGCCCAGGCGGTGAGAAGACC...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGCCAGGCCCATCTTCATaGAACCCATTGGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWPGPSS*NPLGTE
Trigger: CTCGGTGCCCAATGGGTTCCATGAAGATGGGCCTGG...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGCCCCCTGGCACCCGTTaGCCAGTGGATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKPPGTR*PVDLCC
Trigger: GCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGG...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCCCCCTGGCACCCGTTaGCCAGTGGATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAPPGTR*PVDLCC
Trigger: GCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
60% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCGTGGTGCACACGGATaGCATTCTTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQRGAHG*HSSGPP
Trigger: AGGGGGACCTGAAGAATGCCATCCGTGTGCACCACG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACCTGGTGGCCAGAGCGTaGTGCACACGGATGGCATTC +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDLVARA*CTRMAF
Trigger: GAATGCCATCCGTGTGCACCACGCTCTGGCCACCAG...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGCTGGTGGCCAGAGCGTaGTGCACACGGATGGCATTC +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLLVARA*CTRMAF
Trigger: GAATGCCATCCGTGTGCACCACGCTCTGGCCACCAG...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGGTGGCCAGAGCGTaGTGCACACGGATGGCATTC +
Preference number: 4 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLLVARA*CTRMAF
Trigger: GAATGCCATCCGTGTGCACCACGCTCTGGCCACCAG...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGGAGGCCTCTCTCCAGTaGGTGACACCTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLEASLQ*VTPVLS
Trigger: GCTGAGCACAGGTGTCACCCACTGGAGAGAGGCCTC...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 72 bp TGCCTGGAGCTCGGTCCAAGCAATCCCTGGCTGGAATaGTGCTCACTGACCCCTCTGGGGACATTTGCCTGC +
Preference number: 4 (lower is better)
Translates to: CLELGPSNPWLE*CSLTPLGTFAC
Trigger: GCAGGCAAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACCGAGCTCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGCATTGGGCACCGAGGTaGGAGACAGGTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEHWAPR*ETGGSR
Trigger: TCTTGAGCCACCTGTCTCTCACCTCGGTGCCCAATG...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCAGTCCAAAGTGAGGCCTaGGAAGTCGAAGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSVQSEA*EVEETE
Trigger: CTCAGTTTCTTCGACTTCTCAGGCCTCACTTTGGAC...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTGGCGGCTACTAGGTTaGTCCTCAGGATCCAGGACA +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQWRLLG*SSGSRT
Trigger: TGTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCA...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCCTCTCTCCAGTGGGTaGCACCTGTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAPLSSG*HLCSAS
Trigger: GCTGGCTGAGCACAGGTGTCACCCACTGGAGAGAGG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGCTGAGGGCGGGGCTTaGGTGTGTTTTCCGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKAEGGA*VCFPES
Trigger: GCTCTCCGGAAAACACACTCAAGCCCCGCCCTCAGC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGCATCCATGTCCGCATaGGTCTTCCGGGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIASMSA*VFRVST
Trigger: CGTGCTGACCCGGAAGACTCATGCGGACATGGATGC...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCTAAAGAGTCCAGGCTaGTATACTGGGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETLKSPG*YTGCPA
Trigger: TGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGCCTCAGGGGACTaGCTAGTTCCCCATCACAAC +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSETASGD*LVPHHN
Trigger: GTTGTGATGGGGAACTAGGCAGTCCCCTGAGGCGGT...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGACCGCCTCAGGGGACTaGCTAGTTCCCCATCACAAC +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLTASGD*LVPHHN
Trigger: GTTGTGATGGGGAACTAGGCAGTCCCCTGAGGCGGT...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGTTCTTGCCCAGCTaGCGAGCTACATCACAGCGC +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETLFLPS*RATSQR
Trigger: GCGCTGTGATGTAGCTCGGCAGCTGGGCAAGAACAA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATACCTTTGTGGCTTTGCTaGCAGTCACAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIPLWLC*QSQARG
Trigger: GCCACGGGCCTGTGACTGGCAGCAAAGCCACAAAGG...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGCCTTTGTGGCTTTGCTaGCAGTCACAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWPLWLC*QSQARG
Trigger: GCCACGGGCCTGTGACTGGCAGCAAAGCCACAAAGG...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGTCGGGCTCCAGGCCGTaGTCCTCCTGGGTAGCACTC +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRSGSRP*SSWVAL
Trigger: GAGTGCTACCCAGGAGGACCACGGCCTGGAGCCCGA...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTGCTCAGGCCTTCGCTaGCTGCTGTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETCSGLR*LLFHSG
Trigger: TCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCATCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSSRLLY*VPRSSS
Trigger: GGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGA...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGCCAGGCCCATCTTCATaGAACCCATTGGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEPGPSS*NPLGTE
Trigger: CTCGGTGCCCAATGGGTTCCATGAAGATGGGCCTGG...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKAPVGQ*ICAARL
Trigger: GAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGTCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWSSGLH*QYRREK
Trigger: CTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGA...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGAGCGCAGGTGAGCGTGTaGATCCCATCTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGAQVSV*IPSSDV
Trigger: CACATCAGAAGATGGGATCCACACGCTCACCTGCGC...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATGCGAGCGGCTTCGCTaGCCCCCTGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSCERLR*PPGTRW
Trigger: CCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAATGCGAGCGGCTTCGCTaGCCCCCTGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKCERLR*PPGTRW
Trigger: CCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCA...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCTGCGAGCGGCTTCGCTaGCCCCCTGGCACCCGTTGG +
Preference number: 4 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCACERLR*PPGTRW
Trigger: CCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCA...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTGCATCAGGGCGCAGGTaGGCGTGTGGATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFASGRR*ACGSHL
Trigger: AAGATGGGATCCACACGCTCACCTGCGCCCTGATGC...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGCATGCAGGTCTGTGTTaGGCAGCATCAGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEHAGLC*AASGRR
Trigger: CCTGCGCCCTGATGCTGCTCAACACAGACCTGCATG...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTCATGCAGGTCTGTGTTaGGCAGCATCAGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFHAGLC*AASGRR
Trigger: CCTGCGCCCTGATGCTGCTCAACACAGACCTGCATG...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCCATCCATGTCCGCATaGGTCTTCCGGGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAPSMSA*VFRVST
Trigger: CGTGCTGACCCGGAAGACTCATGCGGACATGGATGG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
CDS-3UTR TCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACTGGCGGCTACTAGGTTaGTCCTCAGGATCCAGGACA +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDWRLLG*SSGSRT
Trigger: TGTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCA...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGTGGCGGCTACTAGGTTaGTCCTCAGGATCCAGGACA +
Preference number: 4 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLWRLLG*SSGSRT
Trigger: TGTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCA...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCTCAACTTATTCTCATaGGACCGCAGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQLNLFS*DRSCSS
Trigger: GGAGGAGCAGCTGCGGTCTCATGAGAATAAGTTGAG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGCCTCTCTCCAGTGGGTaGCACCTGTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRPLSSG*HLCSAS
Trigger: GCTGGCTGAGCACAGGTGTCACCCACTGGAGAGAGG...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCCGCTCCAGGTCATCTaGGCCCACTTTGATTTTCAC +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQPLQVI*AHFDFH
Trigger: GTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACCGCTCCAGGTCATCTaGGCCCACTTTGATTTTCAC +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGPLQVI*AHFDFH
Trigger: GTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACTATCTCGAGCCCTCTaGTGGATGAGAGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGLSRAL*WMRGVR
Trigger: CCTTACACCTCTCATCCAGCAGAGGGCTCGAGATAG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCTATCTCGAGCCCTCTaGTGGATGAGAGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQLSRAL*WMRGVR
Trigger: CCTTACACCTCTCATCCAGCAGAGGGCTCGAGATAG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CAGGGGTCGACAAAACTTCTTCATGGAGCTGACGGCTGCTGGGAAGGCTGGTGCTTGTTCTTGCCCAGCTaGCGAGCTACATCACAGCGC +
Preference number: 4 (lower is better)
Translates to: QGSTKLLHGADGCWEGWCLFLPS*RATSQR
Trigger: GCGCTGTGATGTAGCTCGGCAGCTGGGCAAGAACAA...GCACCAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGTTTTGTCGACCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000176472.8
CDS-3UTR GCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCAGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSESPSL*PSQTCH
Trigger: ATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTC...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGGAACACCCTCCAGTCTaGTGTCTTCAGCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQEHPPV*CLQLEH
Trigger: GTGCTCAAGCTGAAGACAGCAGACTGGAGGGTGTTC...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCACTTGTGCAGCTCACATaGGAGCTTCTCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSLVQLT*ELLFIH
Trigger: ATGGATGAAGAGAAGCTCCCATGTGAGCTGCACAAG...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGGTCTTCTCACCGCCTaGGCCGCTGATGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGGLLTA*AADVAA
Trigger: AGCAGCCACATCAGCGGCCCAGGCGGTGAGAAGACC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGATCCTCCTCCTCTGCTaGTCCGCTTCTCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEILLLC*SASPGL
Trigger: AAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGAT...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGAGGGTCCCCAGCATCTaGACAGGGACTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRRVPSI*TGTPRD
Trigger: GTCCCTGGGAGTCCCTGTCCAGATGCTGGGGACCCT...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGTCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKESRLLY*VPRSSS
Trigger: GGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGA...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCGAGGTGAGAGACAGGTaGCTCAAGACATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLEVRDR*LKTFSE
Trigger: CTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTC...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGGCGCAGGTGAGCGTGTaGATCCCATCTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLAQVSV*IPSSDV
Trigger: CACATCAGAAGATGGGATCCACACGCTCACCTGCGC...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGGCGCAGGTGAGCGTGTaGATCCCATCTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEAQVSV*IPSSDV
Trigger: CACATCAGAAGATGGGATCCACACGCTCACCTGCGC...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATACGTGGTGCACACGGATaGCATTCTTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIRGAHG*HSSGPP
Trigger: AGGGGGACCTGAAGAATGCCATCCGTGTGCACCACG...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGAGTCAGAAGCCCTGGTaGCCAGAGCGTGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKESQKPW*PERGAH
Trigger: GTGTGCACCACGCTCTGGCCACCAGGGCTTCTGACT...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCATGTTTTCCGGAGAGCTaGGTCATCCCCTTCTATAGT +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSCFPES*VIPFYS
Trigger: ACTATAGAAGGGGATGACCCAGCTCTCCGGAAAACA...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 72 bp ATCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTaGCCTGTTAACTGCCTGGAGCTCGGTCCAAGCAAT +
Preference number: 4 (lower is better)
Translates to: ISLGTGLSTPLW*PVNCLELGPSN
Trigger: ATTGCTTGGACCGAGCTCCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 72 bp CAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTaGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTG +
Preference number: 4 (lower is better)
Translates to: QREAGELGRLQR*LVVHRPAAGQL
Trigger: CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACACCGCCTGGGCCGCTaGTGTGGCTGCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKHRLGR*CGCSGL
Trigger: AAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCACACCGCCTGGGCCGCTaGTGTGGCTGCTCAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSHRLGR*CGCSGL
Trigger: AAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTG...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCATTGGGCACCGAGGTaGGAGACAGGTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAHWAPR*ETGGSR
Trigger: TCTTGAGCCACCTGTCTCTCACCTCGGTGCCCAATG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCAGCAACCAGCCTGCTaGACTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLQQPAC*THCSCP
Trigger: TGGGCAAGAACAATGAGTTCAGCAGGCTGGTTGCTG...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGAGAAGTCGAAGAAACTaGGGTACTCCCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWRSRRN*GTPQQP
Trigger: TGGTTGCTGGGGAGTACCTCAGTTTCTTCGACTTCT...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGCATCAGGGCGCAGGTaGGCGTGTGGATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGASGRR*ACGSHL
Trigger: AAGATGGGATCCACACGCTCACCTGCGCCCTGATGC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWGPSWQ*IAGRTS
Trigger: AGATGTCCTGCCAGCAATTCATTGCCAACTTGGACC...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGCTCAACTTATTCTCATaGGACCGCAGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSELNLFS*DRSCSS
Trigger: GGAGGAGCAGCTGCGGTCTCATGAGAATAAGTTGAG...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGCAGTGCAGGGCCCCCTGCAGGCTTCCTCCATAGCAGGCCAGGCTCCAAGTCAGGCTTTTCTCAAAGGTaGGATAGTGTTCCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: SSAGPPAGFLHSRPGSKSGFSQR*DSVPSD
Trigger: GTCTGAAGGAACACTATCTCACCTTTGAGAAAAGCC...TGACTTGGAGCCTGGCCTGCTATGGAGGAAGCCTGCAGGGGGCCCTGCACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCTAAAGAGTCCAGGCTaGTATACTGGGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLLKSPG*YTGCPA
Trigger: TGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGTGGCCAGTGGATCTGTaGTGCCAGGCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRWPVDL*CQAPAP
Trigger: AGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCA...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGTTGTTCTTGCCCAGCTaGCGAGCTACATCACAGCGC +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLLFLPS*RATSQR
Trigger: GCGCTGTGATGTAGCTCGGCAGCTGGGCAAGAACAA...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATATTGTTCTTGCCCAGCTaGCGAGCTACATCACAGCGC +
Preference number: 4 (lower is better)
Translates to: CNVRQENWAGCKGCWWSILFLPS*RATSQR
Trigger: GCGCTGTGATGTAGCTCGGCAGCTGGGCAAGAACAA...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACTGTACTCATCCTTCTaGAGGTACAGGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGLYSSF*RYRMVP
Trigger: AGGGACCATCCTGTACCTGCAGAAGGATGAGTACAG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCTGTACTCATCCTTCTaGAGGTACAGGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQLYSSF*RYRMVP
Trigger: AGGGACCATCCTGTACCTGCAGAAGGATGAGTACAG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQQTVLF*FLRLEA
Trigger: GGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWQTVLF*FLRLEA
Trigger: GGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTG...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCTATCCTTTGTGGCTTTaGTGCCAGTCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVYPLWL*CQSQAR
Trigger: ACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATA...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTGCTGCTGTTCCATTCTaGAGCCCAGGCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFAAVPF*SPGSSS
Trigger: CGAAGAGGAGCCTGGGCTCCAGAATGGAACAGCAGC...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGCTGCTGTTCCATTCTaGAGCCCAGGCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKAAVPF*SPGSSS
Trigger: CGAAGAGGAGCCTGGGCTCCAGAATGGAACAGCAGC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGAGGGTCCCCAGCATCTaGACAGGGACTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRRVPSI*TGTPRD
Trigger: GTCCCTGGGAGTCCCTGTCCAGATGCTGGGGACCCT...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRAPVGQ*ICAARL
Trigger: GAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGC...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTCGTGGTGCACACGGATaGCATTCTTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFRGAHG*HSSGPP
Trigger: AGGGGGACCTGAAGAATGCCATCCGTGTGCACCACG...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCGTGGTGCACACGGATaGCATTCTTCAGGTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRARGAHG*HSSGPP
Trigger: AGGGGGACCTGAAGAATGCCATCCGTGTGCACCACG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCAGTCAGAAGCCCTGGTaGCCAGAGCGTGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGSQKPW*PERGAH
Trigger: GTGTGCACCACGCTCTGGCCACCAGGGCTTCTGACT...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGAGGCCTCTCTCCAGTaGGTGACACCTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGEASLQ*VTPVLS
Trigger: GCTGAGCACAGGTGTCACCCACTGGAGAGAGGCCTC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
3UTR CAA 72 bp CAGCTTGGCACTGAGTGGAGGTTAGGCCCCAGATTATaGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAA +
Preference number: 4 (lower is better)
Translates to: QLGTEWRLGPRL*QREAGELGRLQ
Trigger: TTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCAATAATCTGGGGCCTAACCTCCACTCAGTGCCAAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAGAAGTCGAAGAAACTaGGGTACTCCCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVRSRRN*GTPQQP
Trigger: TGGTTGCTGGGGAGTACCTCAGTTTCTTCGACTTCT...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACAGAAGTCGAAGAAACTaGGGTACTCCCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDRSRRN*GTPQQP
Trigger: TGGTTGCTGGGGAGTACCTCAGTTTCTTCGACTTCT...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGTGGCGGCTACTAGGTTaGTCCTCAGGATCCAGGACA +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKWRLLG*SSGSRT
Trigger: TGTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCA...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCACTTCTTCATGGAGCTaGCGGCTGCTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGTSSWS*RLLGRL
Trigger: CAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGT...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCACCGCTCCAGGTCATCTaGGCCCACTTTGATTTTCAC +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSPLQVI*AHFDFH
Trigger: GTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGG...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTCTAAAGAGTCCAGGCTaGTATACTGGGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFLKSPG*YTGCPA
Trigger: TGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAG...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGACCGCCTCAGGGGACTaGCTAGTTCCCCATCACAAC +
Preference number: 4 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKTASGD*LVPHHN
Trigger: GTTGTGATGGGGAACTAGGCAGTCCCCTGAGGCGGT...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TCTCCTTGGGCACAGGGCTCTCCACACCCCTCTGGTTGCCTGTTAACTGCCTGGGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: SPWAQGSPHPSGCLLTAWESPSL*PSQTCH
Trigger: ATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTC...CCAGGCAGTTAACAGGCAACCAGAGGGGTGTGGAGAGCCCTGTGCCCAAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGAGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGESPSL*PSQTCH
Trigger: ATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTC...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: SFLTARRSVQRASLELGDQTVLF*FLRLEA
Trigger: GGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTG...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGTATAGTAGCCAGCCGTaGCTCAATCCGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKYSSQP*LNPLQV
Trigger: GACCTGGAGCGGATTGAGGCACGGCTGGCTACTATA...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACATGTTCACGTGTCCATaGAGGTCTGTGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDMFTCP*RSVLSS
Trigger: GCTGCTCAACACAGACCTGCATGGACACGTGAACAT...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CCA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGCTTGTGCAGCTCACATaGGAGCTTCTCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: YCQEVCAEGITGARRPWQLVQLT*ELLFIH
Trigger: ATGGATGAAGAGAAGCTCCCATGTGAGCTGCACAAG...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCTGCTCAGGCCTTCGCTaGCTGCTGTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRACSGLR*LLFHSG
Trigger: TCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCA...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCCTCTCACAGGCTCCATaGTACCCTCTAAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVLSQAP*YPLRSS
Trigger: AGAAGACCTTAGAGGGTACCATGGAGCCTGTGAGAG...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCATCCTCCTCCTCTGCTaGTCCGCTTCTCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAILLLC*SASPGL
Trigger: AAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGAT...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTATCCTCCTCCTCTGCTaGTCCGCTTCTCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFILLLC*SASPGL
Trigger: AAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGAT...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGAGGTGAGAGACAGGTaGCTCAAGACATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVEVRDR*LKTFSE
Trigger: CTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCTTCGCTGACCCCCTaGCACCCGTTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKASLTP*HPLASG
Trigger: TCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGC...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGGCTTCGCTGACCCCCTaGCACCCGTTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVASLTP*HPLASG
Trigger: TCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGC...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGTCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKSSGLH*QYRREK
Trigger: CTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGA...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGCGCAGGTGAGCGTGTaGATCCCATCTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKAQVSV*IPSSDV
Trigger: CACATCAGAAGATGGGATCCACACGCTCACCTGCGC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETWPSFS*SKLAMN
Trigger: ATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGTCTTTGGCAAAGTCTTaGCCATCGTTCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSESLAKS*PSFSWS
Trigger: GGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGA...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTGTTTTCCGGAGAGCTaGGTCATCCCCTTCTATAGT +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETCFPES*VIPFYS
Trigger: ACTATAGAAGGGGATGACCCAGCTCTCCGGAAAACA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGTCCAAAGTGAGGCCTaGGAAGTCGAAGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLVQSEA*EVEETE
Trigger: CTCAGTTTCTTCGACTTCTCAGGCCTCACTTTGGAC...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTGTGCTCTGTCCAAAGTaGGGCCTGAGAAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFVLCPK*GLRSRR
Trigger: TCTTCGACTTCTCAGGCCTCACTTTGGACAGAGCAC...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGGTGCTCTGTCCAAAGTaGGGCCTGAGAAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEVLCPK*GLRSRR
Trigger: TCTTCGACTTCTCAGGCCTCACTTTGGACAGAGCAC...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACCATGCAGGTCTGTGTTaGGCAGCATCAGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDHAGLC*AASGRR
Trigger: CCTGCGCCCTGATGCTGCTCAACACAGACCTGCATG...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACCCATCCATGTCCGCATaGGTCTTCCGGGTCAGCACG +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDPSMSA*VFRVST
Trigger: CGTGCTGACCCGGAAGACTCATGCGGACATGGATGG...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
CDS-3UTR TCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCACTGCTGTCTTCAGCTTaGGCACGTTGGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSLLSSA*ARWTSY
Trigger: GTAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAG...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCTCAACTTATTCTCATaGGACCGCAGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRALNLFS*DRSCSS
Trigger: GGAGGAGCAGCTGCGGTCTCATGAGAATAAGTTGAG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGGCTTTTCTCAAAGGTaGGATAGTGTTCCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETGFSQR*DSVPSD
Trigger: GTCTGAAGGAACACTATCTCACCTTTGAGAAAAGCC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACCAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDQAFAG*CSILEP
Trigger: GGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTG...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGATCACAACCACCAGTTaGCCCCAGATCCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRITTTS*PQIPFR
Trigger: CCTGAAGGGGATCTGGGGGCAACTGGTGGTTGTGAT...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCATCACAACCACCAGTTaGCCCCAGATCCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGITTTS*PQIPFR
Trigger: CCTGAAGGGGATCTGGGGGCAACTGGTGGTTGTGAT...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATGGCCAGTGGATCTGTaGTGCCAGGCTCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSWPVDL*CQAPAP
Trigger: AGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGTTGTTCTTGCCCAGCTaGCGAGCTACATCACAGCGC +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRLFLPS*RATSQR
Trigger: GCGCTGTGATGTAGCTCGGCAGCTGGGCAAGAACAA...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGGGCAGGACATCTTCTTaGCAATGTTGTGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLGRTSS*QCCVHA
Trigger: TGCATGGACACAACATTGGCAAGAAGATGTCCTGCC...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLKLAMN*WQDIFL
Trigger: CAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTT...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDESPSL*PSQTCH
Trigger: ATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTC...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGGGTCCCTTTGAGCACTaGATAGAATTTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEGPFEH*IEFLPA
Trigger: GGCTGGAAGAAATTCTATGCAGTGCTCAAAGGGACC...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGTATAGTAGCCAGCCGTaGCTCAATCCGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKYSSQP*LNPLQV
Trigger: GACCTGGAGCGGATTGAGGCACGGCTGGCTACTATA...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACCCTTTGTGGCTTTGCTaGCAGTCACAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDPLWLC*QSQARG
Trigger: GCCACGGGCCTGTGACTGGCAGCAAAGCCACAAAGG...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCTATCCTTTGTGGCTTTaGTGCCAGTCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAYPLWL*CQSQAR
Trigger: ACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATA...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCCTTGTGCAGCTCACATaGGAGCTTCTCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVLVQLT*ELLFIH
Trigger: ATGGATGAAGAGAAGCTCCCATGTGAGCTGCACAAG...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGTCGGGCTCCAGGCCGTaGTCCTCCTGGGTAGCACTC +
Preference number: 4 (lower is better)
Translates to: TGARRPWQYSQEDQKQTESGSRP*SSWVAL
Trigger: GAGTGCTACCCAGGAGGACCACGGCCTGGAGCCCGA...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCACTCTCACAGGCTCCATaGTACCCTCTAAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSLSQAP*YPLRSS
Trigger: AGAAGACCTTAGAGGGTACCATGGAGCCTGTGAGAG...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAAGGGTCCCCAGCATCTaGACAGGGACTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKRVPSI*TGTPRD
Trigger: GTCCCTGGGAGTCCCTGTCCAGATGCTGGGGACCCT...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAAGGGTCCCCAGCATCTaGACAGGGACTCCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSRVPSI*TGTPRD
Trigger: GTCCCTGGGAGTCCCTGTCCAGATGCTGGGGACCCT...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGGAGGTGAGAGACAGGTaGCTCAAGACATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWEVRDR*LKTFSE
Trigger: CTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTC...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGTCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKSSGLH*QYRREK
Trigger: CTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGA...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGTGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLWPSFS*SKLAMN
Trigger: ATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACGCTCATCCTCATCAATaGCCCATTCCAGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: SFLTARRSVQRASLELGDAHPHQ*PIPAFR
Trigger: ACGAAAAGCTGGAATGGGCCATTGATGAGGATGAGC...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGGCTCATCCTCATCAATaGCCCATTCCAGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEAHPHQ*PIPAFR
Trigger: ACGAAAAGCTGGAATGGGCCATTGATGAGGATGAGC...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGTGCTCTGTCCAAAGTaGGGCCTGAGAAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGVLCPK*GLRSRR
Trigger: TCTTCGACTTCTCAGGCCTCACTTTGGACAGAGCAC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGGCATCAGGGCGCAGGTaGGCGTGTGGATCCCATCTT +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVASGRR*ACGSHL
Trigger: AAGATGGGATCCACACGCTCACCTGCGCCCTGATGC...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCATGCAGGTCTGTGTTaGGCAGCATCAGGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVHAGLC*AASGRR
Trigger: CCTGCGCCCTGATGCTGCTCAACACAGACCTGCATG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGACCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGPAFRS*WSCKVS
Trigger: AGACACTTTACAACTCCATCAAGAACGAAAAGCTGG...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGACAGGATGGTCCCTTTaGGCACTGCATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: VRQENWAGCKGCWWSIDLTGWSL*ALHRIS
Trigger: AGAAATTCTATGCAGTGCTCAAAGGGACCATCCTGT...CAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGACAGGATGGTCCCTTTaGGCACTGCATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLTGWSL*ALHRIS
Trigger: AGAAATTCTATGCAGTGCTCAAAGGGACCATCCTGT...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCTGCTGTCTTCAGCTTaGGCACGTTGGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRALLSSA*ARWTSY
Trigger: GTAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGGCTTTTCTCAAAGGTaGGATAGTGTTCCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDGFSQR*DSVPSD
Trigger: GTCTGAAGGAACACTATCTCACCTTTGAGAAAAGCC...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGCCGCTCCAGGTCATCTaGGCCCACTTTGATTTTCAC +
Preference number: 4 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKPLQVI*AHFDFH
Trigger: GTGAAAATCAAAGTGGGCTCAGATGACCTGGAGCGG...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGCTAAAGAGTCCAGGCTaGTATACTGGGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRLKSPG*YTGCPA
Trigger: TGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAG...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGCTATCTCGAGCCCTCTaGTGGATGAGAGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRLSRAL*WMRGVR
Trigger: CCTTACACCTCTCATCCAGCAGAGGGCTCGAGATAG...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACACCGCCTCAGGGGACTaGCTAGTTCCCCATCACAAC +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDTASGD*LVPHHN
Trigger: GTTGTGATGGGGAACTAGGCAGTCCCCTGAGGCGGT...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGAACACCCTCCAGTCTaGTGTCTTCAGCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGEHPPV*CLQLEH
Trigger: GTGCTCAAGCTGAAGACAGCAGACTGGAGGGTGTTC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCACCTTTGTGGCTTTGCTaGCAGTCACAGGCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSPLWLC*QSQARG
Trigger: GCCACGGGCCTGTGACTGGCAGCAAAGCCACAAAGG...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGTATCCTTTGTGGCTTTaGTGCCAGTCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRYPLWL*CQSQAR
Trigger: ACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATA...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTCTCTCACAGGCTCCATaGTACCCTCTAAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFLSQAP*YPLRSS
Trigger: AGAAGACCTTAGAGGGTACCATGGAGCCTGTGAGAG...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACCCAGGCCCATCTTCATaGAACCCATTGGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDPGPSS*NPLGTE
Trigger: CTCGGTGCCCAATGGGTTCCATGAAGATGGGCCTGG...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGCGCAGGTGAGCGTGTaGATCCCATCTTCTGATGTG +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRAQVSV*IPSSDV
Trigger: CACATCAGAAGATGGGATCCACACGCTCACCTGCGC...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDLAMNC*QDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAA...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: SFLTARRSVQRASLELGDLAMNC*QDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAA...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGAGTCAGAAGCCCTGGTaGCCAGAGCGTGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVSQKPW*PERGAH
Trigger: GTGTGCACCACGCTCTGGCCACCAGGGCTTCTGACT...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAAGTCAGAAGCCCTGGTaGCCAGAGCGTGGTGCACAC +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSSQKPW*PERGAH
Trigger: GTGTGCACCACGCTCTGGCCACCAGGGCTTCTGACT...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGCAGAGGTATCCTTTGTaGCTTTGCTGCCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEQRYPL*LCCQSQ
Trigger: CTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTG...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCAGAGGTATCCTTTGTaGCTTTGCTGCCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAQRYPL*LCCQSQ
Trigger: CTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCATTGGGCACCGAGGTaGGAGACAGGTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAHWAPR*ETGGSR
Trigger: TCTTGAGCCACCTGTCTCTCACCTCGGTGCCCAATG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGAGAAGTCGAAGAAACTaGGGTACTCCCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKRSRRN*GTPQQP
Trigger: TGGTTGCTGGGGAGTACCTCAGTTTCTTCGACTTCT...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGGTCCAAAGTGAGGCCTaGGAAGTCGAAGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKVQSEA*EVEETE
Trigger: CTCAGTTTCTTCGACTTCTCAGGCCTCACTTTGGAC...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGACAGGATGGTCCCTTTaGGCACTGCATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLTGWSL*ALHRIS
Trigger: AGAAATTCTATGCAGTGCTCAAAGGGACCATCCTGT...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGACTTCTTCATGGAGCTaGCGGCTGCTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVTSSWS*RLLGRL
Trigger: CAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGT...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGCTCAACTTATTCTCATaGGACCGCAGCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRLNLFS*DRSCSS
Trigger: GGAGGAGCAGCTGCGGTCTCATGAGAATAAGTTGAG...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGGGCTTTTCTCAAAGGTaGGATAGTGTTCCTTCAGAC +
Preference number: 4 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWGFSQR*DSVPSD
Trigger: GTCTGAAGGAACACTATCTCACCTTTGAGAAAAGCC...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAACCGCCTCAGGGGACTaGCTAGTTCCCCATCACAAC +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSTASGD*LVPHHN
Trigger: GTTGTGATGGGGAACTAGGCAGTCCCCTGAGGCGGT...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFESPSL*PSQTCH
Trigger: ATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTC...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGTCCCTTTGAGCACTaGATAGAATTTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKGPFEH*IEFLPA
Trigger: GGCTGGAAGAAATTCTATGCAGTGCTCAAAGGGACC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAACACCCTCCAGTCTaGTGTCTTCAGCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTREHPPV*CLQLEH
Trigger: GTGCTCAAGCTGAAGACAGCAGACTGGAGGGTGTTC...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCTTGTGCAGCTCACATaGGAGCTTCTCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRALVQLT*ELLFIH
Trigger: ATGGATGAAGAGAAGCTCCCATGTGAGCTGCACAAG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCTGCTGTTCCATTCTaGAGCCCAGGCTCCTCTTCG +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKAAVPF*SPGSSS
Trigger: CGAAGAGGAGCCTGGGCTCCAGAATGGAACAGCAGC...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGAGGTGAGAGACAGGTaGCTCAAGACATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGEVRDR*LKTFSE
Trigger: CTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCCCAGGCCCATCTTCATaGAACCCATTGGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPPGPSS*NPLGTE
Trigger: CTCGGTGCCCAATGGGTTCCATGAAGATGGGCCTGG...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTCCCCCTGGCACCCGTTaGCCAGTGGATCTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIPPGTR*PVDLCC
Trigger: GCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGG...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTGCTTCGCTGACCCCCTaGCACCCGTTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAASLTP*HPLASG
Trigger: TCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGC...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTGCTTCGCTGACCCCCTaGCACCCGTTGGCCAGTGGA +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIASLTP*HPLASG
Trigger: TCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGC...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGCATCAGATGGGAGTGGTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: NPTTPLHKLPAPCIRWEWLAMNC*QDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAA...CCACTCCCATCTGATGCAGGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACTCTTCAAAAGGTCTTTaGCAAAGTCTTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDSSKGL*QSLGHR
Trigger: ACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGA...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGGCTCATCCTCATCAATaGCCCATTCCAGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEAHPHQ*PIPAFR
Trigger: ACGAAAAGCTGGAATGGGCCATTGATGAGGATGAGC...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGTGTTTTCCGGAGAGCTaGGTCATCCCCTTCTATAGT +
Preference number: 4 (lower is better)
Translates to: LTNTGRGRSLMRREPGKECFPES*VIPFYS
Trigger: ACTATAGAAGGGGATGACCCAGCTCTCCGGAAAACA...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCCATTGGGCACCGAGGTaGGAGACAGGTGGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSHWAPR*ETGGSR
Trigger: TCTTGAGCCACCTGTCTCTCACCTCGGTGCCCAATG...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRGPSWQ*IAGRTS
Trigger: AGATGTCCTGCCAGCAATTCATTGCCAACTTGGACC...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLPAFRS*WSCKVS
Trigger: AGACACTTTACAACTCCATCAAGAACGAAAAGCTGG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTCCTCTCTCCAGTGGGTaGCACCTGTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIPLSSG*HLCSAS
Trigger: GCTGGCTGAGCACAGGTGTCACCCACTGGAGAGAGG...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTAAAGAGTCCAGGCTaGTATACTGGGTGCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVLKSPG*YTGCPA
Trigger: TGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAATCACAACCACCAGTTaGCCCCAGATCCCCTTCAGG +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSITTTS*PQIPFR
Trigger: CCTGAAGGGGATCTGGGGGCAACTGGTGGTTGTGAT...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGGCAGGACATCTTCTTaGCAATGTTGTGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGGRTSS*QCCVHA
Trigger: TGCATGGACACAACATTGGCAAGAAGATGTCCTGCC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTATAGTAGCCAGCCGTaGCTCAATCCGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPYSSQP*LNPLQV
Trigger: GACCTGGAGCGGATTGAGGCACGGCTGGCTACTATA...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCATCCTCCTCCTCTGCTaGTCCGCTTCTCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAILLLC*SASPGL
Trigger: AAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGAT...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSSSGLH*QYRREK
Trigger: CTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCTGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGWPSFS*SKLAMN
Trigger: ATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGTGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRWPSFS*SKLAMN
Trigger: ATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGTCTTTGGCAAAGTCTTaGCCATCGTTCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRSLAKS*PSFSWS
Trigger: GGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGA...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCATCTTCAAAAGGTCTTTaGCAAAGTCTTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: SRARRGSRPAMVQDARRSSSKGL*QSLGHR
Trigger: ACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGA...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACAGCAACCAGCCTGCTaGACTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKQQPAC*THCSCP
Trigger: TGGGCAAGAACAATGAGTTCAGCAGGCTGGTTGCTG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTCCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFPAFRS*WSCKVS
Trigger: AGACACTTTACAACTCCATCAAGAACGAAAAGCTGG...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCCTATCTCGAGCCCTCTaGTGGATGAGAGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPLSRAL*WMRGVR
Trigger: CCTTACACCTCTCATCCAGCAGAGGGCTCGAGATAG...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTATCTCGAGCCCTCTaGTGGATGAGAGGTGTAAGG +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVLSRAL*WMRGVR
Trigger: CCTTACACCTCTCATCCAGCAGAGGGCTCGAGATAG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTTCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPASRLLY*VPRSSS
Trigger: GGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGA...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCTCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSSSGLH*QYRREK
Trigger: CTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGA...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTCTGGTGGCCAGAGCGTaGTGCACACGGATGGCATTC +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLILVARA*CTRMAF
Trigger: GAATGCCATCCGTGTGCACCACGCTCTGGCCACCAG...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTGAGGCCTCTCTCCAGTaGGTGACACCTGTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIEASLQ*VTPVLS
Trigger: GCTGAGCACAGGTGTCACCCACTGGAGAGAGGCCTC...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCCAGCAACCAGCCTGCTaGACTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSQQPAC*THCSCP
Trigger: TGGGCAAGAACAATGAGTTCAGCAGGCTGGTTGCTG...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGCAGCAACCAGCCTGCTaGACTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: TGARRPWQYSQEDQKQTEQQPAC*THCSCP
Trigger: TGGGCAAGAACAATGAGTTCAGCAGGCTGGTTGCTG...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCAGAAGTCGAAGAAACTaGGGTACTCCCCAGCAACCA +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPRSRRN*GTPQQP
Trigger: TGGTTGCTGGGGAGTACCTCAGTTTCTTCGACTTCT...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCGTCCAAAGTGAGGCCTaGGAAGTCGAAGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPVQSEA*EVEETE
Trigger: CTCAGTTTCTTCGACTTCTCAGGCCTCACTTTGGAC...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTCTGTCCAAAGTaGGGCCTGAGAAGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: TGARRPWQYSQEDQKQTEVLCPK*GLRSRR
Trigger: TCTTCGACTTCTCAGGCCTCACTTTGGACAGAGCAC...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCT +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKGPSWQ*IAGRTS
Trigger: AGATGTCCTGCCAGCAATTCATTGCCAACTTGGACC...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCCCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGPAFRS*WSCKVS
Trigger: AGACACTTTACAACTCCATCAAGAACGAAAAGCTGG...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGCCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRPAFRS*WSCKVS
Trigger: AGACACTTTACAACTCCATCAAGAACGAAAAGCTGG...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCTGCTGTCTTCAGCTTaGGCACGTTGGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCALLSSA*ARWTSY
Trigger: GTAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAG...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTGCTGTCTTCAGCTTaGGCACGTTGGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVLLSSA*ARWTSY
Trigger: GTAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTACTTCTTCATGGAGCTaGCGGCTGCTGGGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPATSSWS*RLLGRL
Trigger: CAGCCTTCCCAGCAGCCGTCAGCTCCATGAAGAAGT...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACGGTCCCTTTGAGCACTaGATAGAATTTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDGPFEH*IEFLPA
Trigger: GGCTGGAAGAAATTCTATGCAGTGCTCAAAGGGACC...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACTGTACTCATCCTTCTaGAGGTACAGGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKLYSSF*RYRMVP
Trigger: AGGGACCATCCTGTACCTGCAGAAGGATGAGTACAG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACGGCAGGACATCTTCTTaGCAATGTTCACGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDGRTSS*QCSRVH
Trigger: ATGGACACGTGAACATTGGCAAGAAGATGTCCTGCC...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACTCTCACAGGCTCCATaGTACCCTCTAAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKLSQAP*YPLRSS
Trigger: AGAAGACCTTAGAGGGTACCATGGAGCCTGTGAGAG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCAGGCCCATCTTCATaGAACCCATTGGGCACCGAG +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAPGPSS*NPLGTE
Trigger: CTCGGTGCCCAATGGGTTCCATGAAGATGGGCCTGG...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATCTTTGGCAAAGTCTTaGCCATCGTTCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSSLAKS*PSFSWS
Trigger: GGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTCTTTGGCAAAGTCTTaGCCATCGTTCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPSLAKS*PSFSWS
Trigger: GGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGA...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCTCTTCAAAAGGTCTTTaGCAAAGTCTTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: GPGCKKISVMSDISISLGSSKGL*QSLGHR
Trigger: ACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGA...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACAGAGGTATCCTTTGTaGCTTTGCTGCCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKQRYPL*LCCQSQ
Trigger: CTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCCAGAGGTATCCTTTGTaGCTTTGCTGCCAGTCACAG +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPQRYPL*LCCQSQ
Trigger: CTGTGACTGGCAGCAAAGCCACAAAGGATACCTCTG...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACACAGGATGGTCCCTTTaGGCACTGCATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDTGWSL*ALHRIS
Trigger: AGAAATTCTATGCAGTGCTCAAAGGGACCATCCTGT...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCGGCAGGACATCTTCTTaGCAATGTTGTGTCCATGCA +
Preference number: 4 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAGRTSS*QCCVHA
Trigger: TGCATGGACACAACATTGGCAAGAAGATGTCCTGCC...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRKLAMN*WQDIFL
Trigger: CAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTT...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCGGTCCCTTTGAGCACTaGATAGAATTTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAGPFEH*IEFLPA
Trigger: GGCTGGAAGAAATTCTATGCAGTGCTCAAAGGGACC...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTTATAGTAGCCAGCCGTaGCTCAATCCGCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIYSSQP*LNPLQV
Trigger: GACCTGGAGCGGATTGAGGCACGGCTGGCTACTATA...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCGGCAGGACATCTTCTTaGCAATGTTCACGTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPGRTSS*QCSRVH
Trigger: ATGGACACGTGAACATTGGCAAGAAGATGTCCTGCC...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCTTGTGCAGCTCACATaGGAGCTTCTCTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVLVQLT*ELLFIH
Trigger: ATGGATGAAGAGAAGCTCCCATGTGAGCTGCACAAG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTTGCTCAGGCCTTCGCTaGCTGCTGTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPACSGLR*LLFHSG
Trigger: TCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCA...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCCTCTCACAGGCTCCATaGTACCCTCTAAGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSLSQAP*YPLRSS
Trigger: AGAAGACCTTAGAGGGTACCATGGAGCCTGTGAGAG...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTATCCTCCTCCTCTGCTaGTCCGCTTCTCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIILLLC*SASPGL
Trigger: AAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGAT...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAAT +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSWPSFS*SKLAMN
Trigger: ATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATGTTTTCCGGAGAGCTaGGTCATCCCCTTCTATAGT +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSCFPES*VIPFYS
Trigger: ACTATAGAAGGGGATGACCCAGCTCTCCGGAAAACA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCAGCAACCAGCCTGCTaGACTCATTGTTCTTGCCCA +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAQQPAC*THCSCP
Trigger: TGGGCAAGAACAATGAGTTCAGCAGGCTGGTTGCTG...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDKLAMN*WQDIFL
Trigger: CAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTT...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTTATCCTTTGTGGCTTTaGTGCCAGTCACAGGCCCGT +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIYPLWL*CQSQAR
Trigger: ACGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATA...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCATTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSLAMNC*QDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAA...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCGCTCATCCTCATCAATaGCCCATTCCAGCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSAHPHQ*PIPAFR
Trigger: ACGAAAAGCTGGAATGGGCCATTGATGAGGATGAGC...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVKLAMN*WQDIFL
Trigger: CAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTT...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTCTGTACTCATCCTTCTaGAGGTACAGGATGGTCCCT +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLILYSSF*RYRMVP
Trigger: AGGGACCATCCTGTACCTGCAGAAGGATGAGTACAG...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCAGACGGTACTCTTCTaGTTCCTTAGACTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAQTVLF*FLRLEA
Trigger: GGCCTCAAGTCTAAGGAAGCAGAAGAGTACCGTCTG...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTATGTTCACGTGTCCATaGAGGTCTGTGTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAMFTCP*RSVLSS
Trigger: GCTGCTCAACACAGACCTGCATGGACACGTGAACAT...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTGAGGTGAGAGACAGGTaGCTCAAGACATTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLIEVRDR*LKTFSE
Trigger: CTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTC...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCA +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSLAMNC*QDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAA...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTCTTCAAAAGGTCTTTaGCAAAGTCTTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPSSKGL*QSLGHR
Trigger: ACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGA...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CCA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAATCTTCAAAAGGTCTTTaGCAAAGTCTTGGCCATCGT +
Preference number: 4 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKSSKGL*QSLGHR
Trigger: ACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGA...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: PVQSKSINWKSDCESQVSKLAMN*WQDIFL
Trigger: CAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTT...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR GCA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTGGTCCCTTTGAGCACTaGATAGAATTTCTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAGPFEH*IEFLPA
Trigger: GGCTGGAAGAAATTCTATGCAGTGCTCAAAGGGACC...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR TCA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTACAGGATGGTCCCTTTaGGCACTGCATAGAATTTCT +
Preference number: 4 (lower is better)
Translates to: DKELRSLCCPLNCLSDLITGWSL*ALHRIS
Trigger: AGAAATTCTATGCAGTGCTCAAAGGGACCATCCTGT...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp CAGCCTGCGAGCGGCTTCGCTGACCCCCTGGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTCCAGCCCCTCAGAGCTGCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: QPASGFADPLAPVGQ*ICAARLQPLRAAQL
Trigger: GAGCTGAGCAGCTCTGAGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 90 bp CTCACCGCCTGGGCCGCTGATGTGGCTGCTCAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCCAGGCTCCTCTTCGGGCTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: LTAWAADVAAQAFAG*CSILEPRLLFGLQA
Trigger: GGCCTGGAGCCCGAAGAGGAGCCTGGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS TCA 90 bp CTTCAAGATGGTAGAGCCGTCGGGCCAGCCTGCGAGCGGCTTCGCTaGCCCCCTGGCACCCGTTGGCCAGTGGATCTGTGCTGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: LQDGRAVGPACERLR*PPGTRWPVDLCCQA
Trigger: AGCCTGGCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCAGGCTGGCCCGACGGCTCTACCATCTTGAAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACACCCCCTGGCACCCGTaGGCCAGTGGATCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDTPWHP*ASGSVL
Trigger: CAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGT...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCCCATGCAGGTCTGTGTaGAGCAGCATCAGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLPCRSV*SSIRAQ
Trigger: CTGCGCCCTGATGCTGCTCAACACAGACCTGCATGG...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCGTAGCACTCCCTTCCTaGTGCAGCTCACATGGGAGC +
Preference number: 5 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLVALPS*CSSHGS
Trigger: GCTCCCATGTGAGCTGCACAAGGAAGGGAGTGCTAC...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGACCCCCTGGCACCCGTaGGCCAGTGGATCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLTPWHP*ASGSVL
Trigger: CAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGT...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGTCCAGCTCTAGAGCATGTCTGGCCCCATGACTGGAGGGCAGCAGGGCTAGGAGTAGCACTCCCTTCCTaGTGCAGCTCACATGGGAGC +
Preference number: 5 (lower is better)
Translates to: CPALEHVWPHDWRAAGLGVALPS*CSSHGS
Trigger: GCTCCCATGTGAGCTGCACAAGGAAGGGAGTGCTAC...TCCTAGCCCTGCTGCCCTCCAGTCATGGGGCCAGACATGCTCTAGAGCTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCGTAGCACTCCCTTCCTaGTGCAGCTCACATGGGAGC +
Preference number: 5 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETVALPS*CSSHGS
Trigger: GCTCCCATGTGAGCTGCACAAGGAAGGGAGTGCTAC...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp GGCCCATCTTCATGGAACCCATTGGGCACCGAGGTGAGAGACAGGTaGCTCAAGACATTCTCTGAGCGGCTGCTAGAGATGGACCGCCTC +
Preference number: 5 (lower is better)
Translates to: GPSSWNPLGTEVRDR*LKTFSERLLEMDRL
Trigger: GAGGCGGTCCATCTCTAGCAGCCGCTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTCGGTGCCCAATGGGTTCCATGAAGATGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCCCCAAAGCCAGGCCATaGGTCAAAGAGAGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLPKARP*VKERLR
Trigger: CCTTAACCTCTCTTTGACCAATGGCCTGGCTTTGGG...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGGCAGAGTTCAGCAACTaGTCCGTGTCCTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: YCQEVCAEGITGARRPWQAEFSN*SVSSSS
Trigger: GGACGATGAGGACACGGACAAGTTGCTGAACTCTGC...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGCTCGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: ASLTLLYRPAWACRRMTLVFGKV*AIVQLV
Trigger: GACCAGCTGAACGATGGCCAAGACTTTGCCAAAGAC...GAGCGTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGTGCCCGTCCCAAACTaGTCATCCACCAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDVPVPN*SSTSSD
Trigger: GTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCAC...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCGTGCCCGTCCCAAACTaGTCATCCACCAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVVPVPN*SSTSSD
Trigger: GTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCAC...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGGACAACATCTCTTCCTaGCTCGGTGCCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: YCQEVCAEGITGARRPWQDNISS*LGAWKR
Trigger: CCTCTTCCAGGCACCGAGCAAGGAAGAGATGTTGTC...CTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCCCAAAGCCAGGCCATaGGTCAAAGAGAGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETPKARP*VKERLR
Trigger: CCTTAACCTCTCTTTGACCAATGGCCTGGCTTTGGG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACGCAGAGTTCAGCAACTaGTCCGTGTCCTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: SFLTARRSVQRASLELGDAEFSN*SVSSSS
Trigger: GGACGATGAGGACACGGACAAGTTGCTGAACTCTGC...GTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAGCCTGCTGAACTCATaGTTCTTGCCCAGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVSLLNS*FLPSCR
Trigger: TCGGCAGCTGGGCAAGAACAATGAGTTCAGCAGGCT...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGCCATGCAGGTCTGTGTaGAGCAGCATCAGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEPCRSV*SSIRAQ
Trigger: CTGCGCCCTGATGCTGCTCAACACAGACCTGCATGG...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCATGGCGGCTACTAGGTaGATCCTCAGGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: ENWAGCKGCWWSIDLLLVMAATR*ILRIQD
Trigger: GTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCAT...GACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCAGTATCCTTTGTGGCTTaGCTGCCAGTCACAGGCCCG +
Preference number: 5 (lower is better)
Translates to: SRARRGSRPAMVQDARRSVSFVA*LPVTGP
Trigger: CGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATAC...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGCTGAACTCATTGTTCTaGCCCAGCTGCCGAGCTACA +
Preference number: 5 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLLNSLF*PSCRAT
Trigger: TGTAGCTCGGCAGCTGGGCAAGAACAATGAGTTCAG...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGCTGAACTCATTGTTCTaGCCCAGCTGCCGAGCTACA +
Preference number: 5 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSELNSLF*PSCRAT
Trigger: TGTAGCTCGGCAGCTGGGCAAGAACAATGAGTTCAG...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCAAGCCTGCTGAACTCATaGTTCTTGCCCAGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: SRARRGSRPAMVQDARRSSLLNS*FLPSCR
Trigger: TCGGCAGCTGGGCAAGAACAATGAGTTCAGCAGGCT...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCCCATGCAGGTCTGTGTaGAGCAGCATCAGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: GPGCKKISVMSDISISLGPCRSV*SSIRAQ
Trigger: CTGCGCCCTGATGCTGCTCAACACAGACCTGCATGG...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGCCATGCAGGTCTGTGTaGAGCAGCATCAGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRPCRSV*SSIRAQ
Trigger: CTGCGCCCTGATGCTGCTCAACACAGACCTGCATGG...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETFSWSK*AMNCWQ
Trigger: CTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAA...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGACCTGCTGCTGGTCAACTGGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LGRLQRLLVVHRPAAGQLVFGKV*AIVQLV
Trigger: GACCAGCTGAACGATGGCCAAGACTTTGCCAAAGAC...CAGTTGACCAGCAGCAGGTCTATGGACCACCAGCAACCTTTGCAACCGGCCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGGTGCCCGTCCCAAACTaGTCATCCACCAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: LTNTGRGRSLMRREPGKEVPVPN*SSTSSD
Trigger: GTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCAC...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGTCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSESESPS*CPSQTC
Trigger: ACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGA...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCCCTCAGACAGAGCCTaGTCAAGCCTGTACTCATCC +
Preference number: 5 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLPSDRA*SSLYSS
Trigger: GGATGAGTACAGGCTTGACAAGGCTCTGTCTGAGGG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp AGCGTGTGGATCCCATCTTCTGATGTGCTGTCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAGTGGGTAAGGACTCGTTCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: SVWIPSSDVLSSGLH*QYRREKWVRTRSRS
Trigger: GGAACGAGAACGAGTCCTTACCCACTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGACAGCACATCAGAAGATGGGATCCACACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCCCAAAGCCAGGCCATaGGTCAAAGAGAGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLPKARP*VKERLR
Trigger: CCTTAACCTCTCTTTGACCAATGGCCTGGCTTTGGG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGACCCAAAATGTTCCCATCTaGTCCCAAAGCCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: PSLLPGGLCRGHHWSSETQNVPI*SQSQAI
Trigger: AATGGCCTGGCTTTGGGACAAGATGGGAACATTTTG...GGTCTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCACCCCCTGGCACCCGTaGGCCAGTGGATCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPTPWHP*ASGSVL
Trigger: CAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGT...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAACCCCCTGGCACCCGTaGGCCAGTGGATCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSTPWHP*ASGSVL
Trigger: CAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGT...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCACTGAACTCATTGTTCTaGCCCAGCTGCCGAGCTACA +
Preference number: 5 (lower is better)
Translates to: SRARRGSRPAMVQDARRSLNSLF*PSCRAT
Trigger: TGTAGCTCGGCAGCTGGGCAAGAACAATGAGTTCAG...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGGAGCCTGGGAAAGAGAGCCTGCTGAACTCATaGTTCTTGCCCAGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: LTNTGRGRSLMRREPGKESLLNS*FLPSCR
Trigger: TCGGCAGCTGGGCAAGAACAATGAGTTCAGCAGGCT...CTCTTTCCCAGGCTCCCTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGCCATGCAGGTCTGTGTaGAGCAGCATCAGGGCGCAG +
Preference number: 5 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRPCRSV*SSIRAQ
Trigger: CTGCGCCCTGATGCTGCTCAACACAGACCTGCATGG...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTATGGCGGCTACTAGGTaGATCCTCAGGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFMAATR*ILRIQD
Trigger: GTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCAT...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGATGGCGGCTACTAGGTaGATCCTCAGGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKMAATR*ILRIQD
Trigger: GTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCAT...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGTGGCAGGACATCTTCTaGCCAATGTTCACGTGTCCA +
Preference number: 5 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEWQDIF*PMFTCP
Trigger: TGGACACGTGAACATTGGCAAGAAGATGTCCTGCCA...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS GCA 90 bp GTCCCCAGCATCTGGACAGGGACTCCCAGGGACATCCTCCTCCTCTaGTGGTCCGCTTCTCCAGGTCTTAAATTCTATGGAATCTTCCAA +
Preference number: 5 (lower is better)
Translates to: VPSIWTGTPRDILLL*WSASPGLKFYGIFQ
Trigger: TTGGAAGATTCCATAGAATTTAAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGATGTCCCTGGGAGTCCCTGTCCAGATGCTGGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp ATGCTTGTAGGTGGTAGCGTTGAGAGCCTGCGGGACATCCAGGAATaGATTGCCACCATCCAAGATCCGAGTCACCTTCTTTGTGCCCGT +
Preference number: 5 (lower is better)
Translates to: MLVGGSVESLRDIQE*IATIQDPSHLLCAR
Trigger: ACGGGCACAAAGAAGGTGACTCGGATCTTGGATGGTGGCAATCCATTCCTGGATGTCCCGCAGGCTCTCAACGCTACCACCTACAAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGTAGCACTCCCTTCCTaGTGCAGCTCACATGGGAGC +
Preference number: 5 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRVALPS*CSSHGS
Trigger: GCTCCCATGTGAGCTGCACAAGGAAGGGAGTGCTAC...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCGCAGAGTTCAGCAACTaGTCCGTGTCCTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: GPGCKKISVMSDISISLGAEFSN*SVSSSS
Trigger: GGACGATGAGGACACGGACAAGTTGCTGAACTCTGC...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCAGAGTTCAGCAACTaGTCCGTGTCCTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRAEFSN*SVSSSS
Trigger: GGACGATGAGGACACGGACAAGTTGCTGAACTCTGC...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGACCCCCTGGCACCCGTaGGCCAGTGGATCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: TGARRPWQYSQEDQKQTETPWHP*ASGSVL
Trigger: CAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGT...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGTCCAGGATGCAAGAAGATCAGCGTCATGAGTGACATCTCCATCTCCTTGGGCAGCCTGCTGAACTCATaGTTCTTGCCCAGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: GPGCKKISVMSDISISLGSLLNS*FLPSCR
Trigger: TCGGCAGCTGGGCAAGAACAATGAGTTCAGCAGGCT...GCCCAAGGAGATGGAGATGTCACTCATGACGCTGATCTTCTTGCATCCTGGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCATGGCAGGACATCTTCTaGCCAATGTTGTGTCCATGC +
Preference number: 5 (lower is better)
Translates to: SRARRGSRPAMVQDARRSWQDIF*PMLCPC
Trigger: GCATGGACACAACATTGGCAAGAAGATGTCCTGCCA...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATATTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIFSWSK*AMNCWQ
Trigger: CTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAA...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLFSWSK*AMNCWQ
Trigger: CTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAA...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKVFGKV*AIVQLV
Trigger: GACCAGCTGAACGATGGCCAAGACTTTGCCAAAGAC...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGTCCTTCCTTACTGCCAGGAGGTCTGTGCAGAGGGCATCACTGGAGCTCGGAGGTCTTCAAAAGGTCTTaGGCAAAGTCTTGGCCATCG +
Preference number: 5 (lower is better)
Translates to: CPSLLPGGLCRGHHWSSEVFKRS*AKSWPS
Trigger: CGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGAC...CTCCGAGCTCCAGTGATGCCCTCTGCACAGACCTCCTGGCAGTAAGGAAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AACAGCTTCCTTAACCCTACTCTACCGCCCAGCCTGGGCTTGCCGGAGGATGACGTCTTCAAAAGGTCTTaGGCAAAGTCTTGGCCATCG +
Preference number: 5 (lower is better)
Translates to: NSFLNPTLPPSLGLPEDDVFKRS*AKSWPS
Trigger: CGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGAC...GTCATCCTCCGGCAAGCCCAGGCTGGGCGGTAGAGTAGGGTTAAGGAAGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGTCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKSESPS*CPSQTC
Trigger: ACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGA...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGCCCTCAGACAGAGCCTaGTCAAGCCTGTACTCATCC +
Preference number: 5 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKPSDRA*SSLYSS
Trigger: GGATGAGTACAGGCTTGACAAGGCTCTGTCTGAGGG...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 90 bp CCAGGAATGGATTGCCACCATCCAAGATCCGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCATCCACCAGCTCAGACAGGGATTTCC +
Preference number: 5 (lower is better)
Translates to: PGMDCHHPRSESPSL*PSQTCHPPAQTGIS
Trigger: GGAAATCCCTGTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGATCTTGGATGGTGGCAATCCATTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GAACTTCACCTCTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGCAAAATGTTCCCATCTaGTCCCAAAGCCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: ELHLYCPPPMTQRVGHWLQNVPI*SQSQAI
Trigger: AATGGCCTGGCTTTGGGACAAGATGGGAACATTTTG...CAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAGAGGTGAAGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGCAGGGCTAGGAGAGGGTCTAGGCCAGCGATGGTCCAGGATGCAAGAAGATCACAAAATGTTCCCATCTaGTCCCAAAGCCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: SRARRGSRPAMVQDARRSQNVPI*SQSQAI
Trigger: AATGGCCTGGCTTTGGGACAAGATGGGAACATTTTG...TGATCTTCTTGCATCCTGGACCATCGCTGGCCTAGACCCTCTCCTAGCCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGGCAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGCTGAACTCATTGTTCTaGCCCAGCTGCCGAGCTACA +
Preference number: 5 (lower is better)
Translates to: RQKHRGSSSSHPVSEQCRLNSLF*PSCRAT
Trigger: TGTAGCTCGGCAGCTGGGCAAGAACAATGAGTTCAG...CCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGAGCCTGCTGAACTCATaGTTCTTGCCCAGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRSLLNS*FLPSCR
Trigger: TCGGCAGCTGGGCAAGAACAATGAGTTCAGCAGGCT...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGAGTCCAGACCCACCCTCACAAATACAGGACGAGGGAGGAGCCTGATGAGAAGTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RVQTHPHKYRTREEPDEKFSWSK*AMNCWQ
Trigger: CTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAA...CTTCTCATCAGGCTCCTCCCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATAGTCTTCAAAAGGTCTTaGGCAAAGTCTTGGCCATCG +
Preference number: 5 (lower is better)
Translates to: CNVRQENWAGCKGCWWSIVFKRS*AKSWPS
Trigger: CGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGAC...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TGCAACGTGAGGCAGGAGAACTGGGCCGGTTGCAAAGGTTGCTGGTGGTCCATATCTGCTGTCTTCAGCTaGAGCACGTTGGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: CNVRQENWAGCKGCWWSISAVFS*STLDFL
Trigger: TAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAGA...TATGGACCACCAGCAACCTTTGCAACCGGCCCAGTTCTCCTGCCTCACGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp CCCAGCATCTGGACAGGGACTCCCAGGGACATCCTCCTCCTCTGCTaGTCCGCTTCTCCAGGTCTTAAATTCTATGGAATCTTCCAAAAT +
Preference number: 5 (lower is better)
Translates to: PSIWTGTPRDILLLC*SASPGLKFYGIFQN
Trigger: ATTTTGGAAGATTCCATAGAATTTAAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGATGTCCCTGGGAGTCCCTGTCCAGATGCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp TCGTCAGTGAGACTCAGCACATCTAAAGAGTCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCCGACTCCAGAATCTTCTCAAAAGTG +
Preference number: 5 (lower is better)
Translates to: SSVRLSTSKESRLLY*VPRSSSDSRIFSKV
Trigger: CACTTTTGAGAAGATTCTGGAGTCGGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAGATGTGCTGAGTCTCACTGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCGTAGCACTCCCTTCCTaGTGCAGCTCACATGGGAGC +
Preference number: 5 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAVALPS*CSSHGS
Trigger: GCTCCCATGTGAGCTGCACAAGGAAGGGAGTGCTAC...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp ATAGCCAAGCTGAAATCCAGAGTCCAGACCCACCCTCACAAATACAGGACGAGGCCCAAAGCCAGGCCATaGGTCAAAGAGAGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: IAKLKSRVQTHPHKYRTRPKARP*VKERLR
Trigger: CCTTAACCTCTCTTTGACCAATGGCCTGGCTTTGGG...CCTCGTCCTGTATTTGTGAGGGTGGGTCTGGACTCTGGATTTCAGCTTGGCTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CAAAAACACAGAGGGTCTTCATCCTCCCATCCAGTGTCAGAGCAGTGCAGGGCCCAAAATGTTCCCATCTaGTCCCAAAGCCAGGCCATT +
Preference number: 5 (lower is better)
Translates to: QKHRGSSSSHPVSEQCRAQNVPI*SQSQAI
Trigger: AATGGCCTGGCTTTGGGACAAGATGGGAACATTTTG...GGCCCTGCACTGCTCTGACACTGGATGGGAGGATGAAGACCCTCTGTGTTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGTCCAAGCAATCCCTGGCTGGAATTGTGCTCACTGACCCCTCTGGGGACATTTTCTGCTGTCTTCAGCTaGAGCACGTTGGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: GPSNPWLELCSLTPLGTFSAVFS*STLDFL
Trigger: TAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAGA...AAATGTCCCCAGAGGGGTCAGTGAGCACAATTCCAGCCAGGGATTGCTTGGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCGTATCCTTTGTGGCTTaGCTGCCAGTCACAGGCCCG +
Preference number: 5 (lower is better)
Translates to: LGDLGSIHKKIKSKQRCAVSFVA*LPVTGP
Trigger: CGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATAC...GGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAGTATCCTTTGTGGCTTaGCTGCCAGTCACAGGCCCG +
Preference number: 5 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSVSFVA*LPVTGP
Trigger: CGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATAC...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 90 bp GCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTGCCAATGTTCACGTGTCCATGCAGG +
Preference number: 5 (lower is better)
Translates to: AKSWPSFSWSKLAMN*WQDIFLPMFTCPCR
Trigger: CCTGCATGGACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CAA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCGTGCCCGTCCCAAACTaGTCATCCACCAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: PVQSKSINWKSDCESQVSVPVPN*SSTSSD
Trigger: GTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCAC...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp ACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCCCGTCCCAAACTaGTCATCCACCAGCTCAGAC +
Preference number: 5 (lower is better)
Translates to: TGARRPWQYSQEDQKQTEVPVPN*SSTSSD
Trigger: GTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCAC...CTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACTCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDSESPS*CPSQTC
Trigger: ACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGA...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGCCCTCAGACAGAGCCTaGTCAAGCCTGTACTCATCC +
Preference number: 5 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVPSDRA*SSLYSS
Trigger: GGATGAGTACAGGCTTGACAAGGCTCTGTCTGAGGG...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCCCCTCAGACAGAGCCTaGTCAAGCCTGTACTCATCC +
Preference number: 5 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPPSDRA*SSLYSS
Trigger: GGATGAGTACAGGCTTGACAAGGCTCTGTCTGAGGG...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTACTGTCCCCCACCCATGACACAGAGAGTGGGACACTGGCTGGAAAATCAAAGTCTGCTGTCTTCAGCTaGAGCACGTTGGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: LLSPTHDTESGTLAGKSKSAVFS*STLDFL
Trigger: TAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAGA...CTTTGATTTTCCAGCCAGTGTCCCACTCTCTGTGTCATGGGTGGGGGACAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGGACAACATCTCTTCCTaGCTCGGTGCCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVDNISS*LGAWKR
Trigger: CCTCTTCCAGGCACCGAGCAAGGAAGAGATGTTGTC...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAGACAACATCTCTTCCTaGCTCGGTGCCTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSDNISS*LGAWKR
Trigger: CCTCTTCCAGGCACCGAGCAAGGAAGAGATGTTGTC...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGATGGCGGCTACTAGGTaGATCCTCAGGATCCAGGAC +
Preference number: 5 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVMAATR*ILRIQD
Trigger: GTCCTGGATCCTGAGGATCAACCTAGTAGCCGCCAT...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 90 bp GCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTGCCAATGTTGTGTCCATGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: AKSWPSFSWSKLAMN*WQDIFLPMLCPCRS
Trigger: AGACCTGCATGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS CCA 90 bp AAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCAATGTTGTGTCCATGCAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: KSWPSFSWSKLAMNC*QDIFLPMLCPCRSV
Trigger: CACAGACCTGCATGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS CCA 90 bp AAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCAATGTTCACGTGTCCATGCAGGTCT +
Preference number: 5 (lower is better)
Translates to: KSWPSFSWSKLAMNC*QDIFLPMFTCPCRS
Trigger: AGACCTGCATGGACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CAA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAACCCAAAGCCAGGCCATaGGTCAAAGAGAGGTTAAGG +
Preference number: 5 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKPKARP*VKERLR
Trigger: CCTTAACCTCTCTTTGACCAATGGCCTGGCTTTGGG...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CCTGTCCAGTCCAAAAGCATCAACTGGAAAAGTGATTGTGAGTCACAAGTCAGCGCAGAGTTCAGCAACTaGTCCGTGTCCTCATCGTCC +
Preference number: 5 (lower is better)
Translates to: PVQSKSINWKSDCESQVSAEFSN*SVSSSS
Trigger: GGACGATGAGGACACGGACAAGTTGCTGAACTCTGC...GCTGACTTGTGACTCACAATCACTTTTCCAGTTGATGCTTTTGGACTGGACAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCACTGAACTCATTGTTCTaGCCCAGCTGCCGAGCTACA +
Preference number: 5 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSLNSLF*PSCRAT
Trigger: TGTAGCTCGGCAGCTGGGCAAGAACAATGAGTTCAG...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACTGGCAGGACATCTTCTaGCCAATGTTGTGTCCATGC +
Preference number: 5 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDWQDIF*PMLCPC
Trigger: GCATGGACACAACATTGGCAAGAAGATGTCCTGCCA...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDFSWSK*AMNCWQ
Trigger: CTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAA...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPVFGKV*AIVQLV
Trigger: GACCAGCTGAACGATGGCCAAGACTTTGCCAAAGAC...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTC +
Preference number: 5 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSVFGKV*AIVQLV
Trigger: GACCAGCTGAACGATGGCCAAGACTTTGCCAAAGAC...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AGAGGGCATCACTGGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAATCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: RGHHWSSETLAVFTRRSKSESPS*CPSQTC
Trigger: ACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGA...TTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCCAGTGATGCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp CTAAGTGATGCGGTGTTCAAAGGATGTCAACCCGTGAGAGACATGTGTCTCGACTGGCAGGACATCTTCTaGCCAATGTTCACGTGTCCA +
Preference number: 5 (lower is better)
Translates to: LSDAVFKGCQPVRDMCLDWQDIF*PMFTCP
Trigger: TGGACACGTGAACATTGGCAAGAAGATGTCCTGCCA...GTCGAGACACATGTCTCTCACGGGTTGACATCCTTTGAACACCGCATCACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS TCA 90 bp CTTTGGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCTTCTTGCCAATGTTGTGTCCATGCA +
Preference number: 5 (lower is better)
Translates to: LWQSLGHRSAGPSWQ*IAGRTSSCQCCVHA
Trigger: TGCATGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS TCA 90 bp CTTTGGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCTTCTTGCCAATGTTCACGTGTCCAT +
Preference number: 5 (lower is better)
Translates to: LWQSLGHRSAGPSWQ*IAGRTSSCQCSRVH
Trigger: ATGGACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS-3UTR CAA 90 bp TTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTCCCTGGCAGGACATCTTCTaGCCAATGTTGTGTCCATGC +
Preference number: 5 (lower is better)
Translates to: LSNLDFNPTTPLHKLPAPWQDIF*PMLCPC
Trigger: GCATGGACACAACATTGGCAAGAAGATGTCCTGCCA...GGGAGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp AATTTAAGCAATTTGGATTTCAACCCCACTACACCTCTCCACAAACTCCCAGCTGTATCCTTTGTGGCTTaGCTGCCAGTCACAGGCCCG +
Preference number: 5 (lower is better)
Translates to: NLSNLDFNPTTPLHKLPAVSFVA*LPVTGP
Trigger: CGGGCCTGTGACTGGCAGCAAAGCCACAAAGGATAC...AGCTGGGAGTTTGTGGAGAGGTGTAGTGGGGTTGAAATCCAAATTGCTTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 90 bp AGTGTCTTCAAAAGGTCTTTGGCAAAGTCTTGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAATTGCTGGCAGGACATCTTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: SVFKRSLAKSWPSFS*SKLAMNCWQDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTGCCCCCAAGGCACTCAGTCTTCAAAAGGTCTTaGGCAAAGTCTTGGCCATCG +
Preference number: 5 (lower is better)
Translates to: AVFTRRSKANRGVPPRHSVFKRS*AKSWPS
Trigger: CGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGAC...TGAGTGCCTTGGGGGCACACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGGTCTTCAAAAGGTCTTaGGCAAAGTCTTGGCCATCG +
Preference number: 5 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVVFKRS*AKSWPS
Trigger: CGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGAC...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GGAGCTCGGAGACCTTGGCAGTATTCACAAGAAGATCAAAAGCAAACAGAGGTGTCTGCTGTCTTCAGCTaGAGCACGTTGGACTTCTTA +
Preference number: 5 (lower is better)
Translates to: GARRPWQYSQEDQKQTEVSAVFS*STLDFL
Trigger: TAAGAAGTCCAACGTGCTCAAGCTGAAGACAGCAGA...CACCTCTGTTTGCTTTTGATCTTCTTGTGAATACTGCCAAGGTCTCCGAGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS-3UTR CAA 90 bp GACAAAGAACTGAGATCTCTTTGCTGCCCCCTAAATTGCCTTTCTGATCTCATTTCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: DKELRSLCCPLNCLSDLISESPS*CPSQTC
Trigger: ACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGA...AATGAGATCAGAAAGGCAATTTAGGGGGCAGCAAAGAGATCTCAGTTCTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS TCA 90 bp TCCTCAGCTCATCCTCATCAATGGCCCATTCCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCTTCAAAAGGTCTTTGGCAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: SSAHPHQWPIPAFRS*WSCKVSSKGLWQSL
Trigger: AAGACTTTGCCAAAGACCTTTTGAAGACACTTTACAACTCCATCAAGAACGAAAAGCTGGAATGGGCCATTGATGAGGATGAGCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp CGTCGGGCCAGCCTGCGAGCGGCTTCGCTGACCCCCTaGCACCCGTTGGCCAGTGGATCTGTGCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: RRASLRAASLTP*HPLASGSVLPG
Trigger: GCCTGGCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGCCGCTCGCAGGCTGGCCCGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp AGCGGCTTCGCTGACCCCCTGGCACCCGTTGGCCAGTaGATCTGTGCTGCCAGGCTCCAGCCCCTCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SGFADPLAPVGQ*ICAARLQPLRA
Trigger: AGCTCTGAGGGGCTGGAGCCTGGCAGCACAGATCCACTGGCCAACGGGTGCCAGGGGGTCAGCGAAGCCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 72 bp TGGGCCGCTGATGTGGCTGCTCAGGCCTTCGCTGGCTaGTGTTCCATTCTGGAGCCCAGGCTCCTCTTCGGG +
Preference number: 6 (lower is better)
Translates to: WAADVAAQAFAG*CSILEPRLLFG
Trigger: CCCGAAGAGGAGCCTGGGCTCCAGAATGGAACAGCAGCCAGCGAAGGCCTGAGCAGCCACATCAGCGGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp TTCTGGAGCCCAGGCTCCTCTTCGGGCTCCAGGCCGTaGTCCTCCTGGGTAGCACTCCCTTCCTTGTGCAGC +
Preference number: 6 (lower is better)
Translates to: FWSPGSSSGSRP*SSWVALPSLCS
Trigger: GCTGCACAAGGAAGGGAGTGCTACCCAGGAGGACCACGGCCTGGAGCCCGAAGAGGAGCCTGGGCTCCAGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp CAGGCAGGGCCACATCTGGGCCTCTCACAGGCTCCATaGTACCCTCTAAGGTCTTCTCACCGCCTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: QAGPHLGLSQAP*YPLRSSHRLGR
Trigger: GCGGCCCAGGCGGTGAGAAGACCTTAGAGGGTACCATGGAGCCTGTGAGAGGCCCAGATGTGGCCCTGCCTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS TCA 72 bp TGGTACCCTCTAAGGTCTTCTCACCGCCTGGGCCGCTaGTGTGGCTGCTCAGGCCTTCGCTGGCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: WYPLRSSHRLGR*CGCSGLRWLLF
Trigger: GAACAGCAGCCAGCGAAGGCCTGAGCAGCCACATCAGCGGCCCAGGCGGTGAGAAGACCTTAGAGGGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS TCA 72 bp CACCGAGGTGAGAGACAGGTGGCTCAAGACATTCTCTaGGCGGCTGCTAGAGATGGACCGCCTCAGGGGACT +
Preference number: 6 (lower is better)
Translates to: HRGERQVAQDIL*AAARDGPPQGT
Trigger: AGTCCCCTGAGGCGGTCCATCTCTAGCAGCCGCTCAGAGAATGTCTTGAGCCACCTGTCTCTCACCTCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 72 bp TCCTTAAGGCTGGTGTCACTGGCAGAGTTCAGCAACTaGTCCGTGTCCTCATCGTCCTCATCGTCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: SLRLVSLAEFSN*SVSSSSSSSPP
Trigger: GGGAGGGGACGATGAGGACGATGAGGACACGGACAAGTTGCTGAACTCTGCCAGTGACACCAGCCTTAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp CTTCTCAAAAGTGGCACTGAAGCCATCACGTACATCTaGTTCGCCAGGACAATCCAGCCCCAGCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: LLKSGTEAITYI*FARTIQPQLRV
Trigger: GACCCTCAGCTGGGGCTGGATTGTCCTGGCGAACCAGATGTACGTGATGGCTTCAGTGCCACTTTTGAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp GGTGGTAGCGTTGAGAGCCTGCGGGACATCCAGGAATaGATTGCCACCATCCAAGATCCGAGTCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: GGSVESLRDIQE*IATIQDPSHLL
Trigger: AAGAAGGTGACTCGGATCTTGGATGGTGGCAATCCATTCCTGGATGTCCCGCAGGCTCTCAACGCTACCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 72 bp ATCTGGACAGGGACTCCCAGGGACATCCTCCTCCTCTaGTGGTCCGCTTCTCCAGGTCTTAAATTCTATGGA +
Preference number: 6 (lower is better)
Translates to: IWTGTPRDILLL*WSASPGLKFYG
Trigger: TCCATAGAATTTAAGACCTGGAGAAGCGGACCAGCAGAGGAGGAGGATGTCCCTGGGAGTCCCTGTCCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 72 bp GCAACCAGCCTGCTGAACTCATTGTTCTTGCCCAGCTaGCGAGCTACATCACAGCGCTGGAAACCTTCAAGA +
Preference number: 6 (lower is better)
Translates to: ATSLLNSLFLPS*RATSQRWKPSR
Trigger: TCTTGAAGGTTTCCAGCGCTGTGATGTAGCTCGGCAGCTGGGCAAGAACAATGAGTTCAGCAGGCTGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp AGACTCAGCACATCTAAAGAGTCCAGGCTGCTATACTaGGTGCCCCGCAGTAGCTCCGACTCCAGAATCTTC +
Preference number: 6 (lower is better)
Translates to: RLSTSKESRLLY*VPRSSSDSRIF
Trigger: GAAGATTCTGGAGTCGGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAGATGTGCTGAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CCA 72 bp ATCCCATCTTCTGATGTGCTGTCGTCTGGGTTACACTaGCAGTACCGGCGAGAGAAGTGGGTAAGGACTCGT +
Preference number: 6 (lower is better)
Translates to: IPSSDVLSSGLH*QYRREKWVRTR
Trigger: ACGAGTCCTTACCCACTTCTCTCGCCGGTACTGCCAGTGTAACCCAGACGACAGCACATCAGAAGATGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 72 bp GTAGCGTTGAGAGCCTGCGGGACATCCAGGAATGGATaGCCACCATCCAAGATCCGAGTCACCTTCTTTGTG +
Preference number: 6 (lower is better)
Translates to: VALRACGTSRNG*PPSKIRVTFFV
Trigger: CACAAAGAAGGTGACTCGGATCTTGGATGGTGGCAATCCATTCCTGGATGTCCCGCAGGCTCTCAACGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 72 bp TCAGCACATCTAAAGAGTCCAGGCTGCTATACTGGGTaGCCCGCAGTAGCTCCGACTCCAGAATCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: SAHLKSPGCYTG*PAVAPTPESSQ
Trigger: TTGAGAAGATTCTGGAGTCGGAGCTACTGCGGGGCACCCAGTATAGCAGCCTGGACTCTTTAGATGTGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 72 bp GATTGCCACCATCCAAGATCCGAGTCACCTTCTTTGTaGCCGTCCCAAACTTGTCATCCACCAGCTCAGACA +
Preference number: 6 (lower is better)
Translates to: DCHHPRSESPSL*PSQTCHPPAQT
Trigger: TGTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGATCTTGGATGGTGGCAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 72 bp AAGATCCGAGTCACCTTCTTTGTGCCCGTCCCAAACTaGTCATCCACCAGCTCAGACAGGGATTTCCTCAGC +
Preference number: 6 (lower is better)
Translates to: KIRVTFFVPVPN*SSTSSDRDFLS
Trigger: GCTGAGGAAATCCCTGTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 72 bp ATGGATTGCCACCATCCAAGATCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGTCATCCACCAGCTCAG +
Preference number: 6 (lower is better)
Translates to: MDCHHPRSESPS*CPSQTCHPPAQ
Trigger: CTGAGCTGGTGGATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGATCTTGGATGGTGGCAATCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 90 bp CATCCAGGAATGGATTGCCACCATCCAAGATCCGAGTCACCTTCTTaGTGCCCGTCCCAAACTTGTCATCCACCAGCTCAGACAGGGATT +
Preference number: 6 (lower is better)
Translates to: HPGMDCHHPRSESPS*CPSQTCHPPAQTGI
Trigger: AATCCCTGTCTGAGCTGGTGGATGACAAGTTTGGGACGGGCACAAAGAAGGTGACTCGGATCTTGGATGGTGGCAATCCATTCCTGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 90 bp GGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATaGCTGGCAGGACATCTTCTTGCCAATGTTGTGTCCATGCAGGTC +
Preference number: 6 (lower is better)
Translates to: GKVLAIVQLVQVGNE*LAGHLLANVVSMQV
Trigger: GACCTGCATGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS CAA 90 bp GGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATaGCTGGCAGGACATCTTCTTGCCAATGTTCACGTGTCCATGCAG +
Preference number: 6 (lower is better)
Translates to: GKVLAIVQLVQVGNE*LAGHLLANVHVSMQ
Trigger: CTGCATGGACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS TCA 72 bp GTAGCTCCGACTCCAGAATCTTCTCAAAAGTGGCACTaGAGCCATCACGTACATCTGGTTCGCCAGGACAAT +
Preference number: 6 (lower is better)
Translates to: VAPTPESSQKWH*SHHVHLVRQDN
Trigger: ATTGTCCTGGCGAACCAGATGTACGTGATGGCTTCAGTGCCACTTTTGAGAAGATTCTGGAGTCGGAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS GCA 72 bp TGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTGCCAATGTTGTGTCCA +
Preference number: 6 (lower is better)
Translates to: WPSFSWSKLAMN*WQDIFLPMLCP
Trigger: TGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS GCA 72 bp TGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTaGTGGCAGGACATCTTCTTGCCAATGTTCACGTGT +
Preference number: 6 (lower is better)
Translates to: WPSFSWSKLAMN*WQDIFLPMFTC
Trigger: ACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS CCA 72 bp CCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCAATGTTGTGTCCATGC +
Preference number: 6 (lower is better)
Translates to: PSFSWSKLAMNC*QDIFLPMLCPC
Trigger: GCATGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS CCA 72 bp CCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTGCTaGCAGGACATCTTCTTGCCAATGTTCACGTGTCCA +
Preference number: 6 (lower is better)
Translates to: PSFSWSKLAMNC*QDIFLPMFTCP
Trigger: TGGACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS CAA 72 bp TTGGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAGGACATCTTCTTGCCA +
Preference number: 6 (lower is better)
Translates to: LAKSWPSFSWSK*AMNCWQDIFLP
Trigger: TGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS TCA 72 bp AGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCTTCTTGCCAATGTTGT +
Preference number: 6 (lower is better)
Translates to: SLGHRSAGPSWQ*IAGRTSSCQCC
Trigger: ACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS TCA 72 bp AGTCTTGGCCATCGTTCAGCTGGTCCAAGTTGGCAATaGATTGCTGGCAGGACATCTTCTTGCCAATGTTCA +
Preference number: 6 (lower is better)
Translates to: SLGHRSAGPSWQ*IAGRTSSCQCS
Trigger: TGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS CCA 72 bp AAAAGGTCTTTGGCAAAGTCTTGGCCATCGTTCAGCTaGTCCAAGTTGGCAATGAATTGCTGGCAGGACATC +
Preference number: 6 (lower is better)
Translates to: KRSLAKSWPSFS*SKLAMNCWQDI
Trigger: GATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGACCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 72 bp TCCAAGTTGGCAATGAATTGCTGGCAGGACATCTTCTaGCCAATGTTGTGTCCATGCAGGTCTGTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: SKLAMNCWQDIF*PMLCPCRSVLS
Trigger: GCTCAACACAGACCTGCATGGACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS CAA 72 bp TCCAAGTTGGCAATGAATTGCTGGCAGGACATCTTCTaGCCAATGTTCACGTGTCCATGCAGGTCTGTGTTG +
Preference number: 6 (lower is better)
Translates to: SKLAMNCWQDIF*PMFTCPCRSVL
Trigger: CAACACAGACCTGCATGGACACGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS CAA 90 bp AAAAGGTCTTTGGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAGGACATCTTCTTGCCAATGTTCACG +
Preference number: 6 (lower is better)
Translates to: KRSLAKSWPSFSWSK*AMNCWQDIFLPMFT
Trigger: CGTGAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGACCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000175734.2
ENSMUST00000176873.8
CDS CAA 90 bp AAAAGGTCTTTGGCAAAGTCTTGGCCATCGTTCAGCTGGTCCAAGTaGGCAATGAATTGCTGGCAGGACATCTTCTTGCCAATGTTGTGT +
Preference number: 6 (lower is better)
Translates to: KRSLAKSWPSFSWSK*AMNCWQDIFLPMLC
Trigger: ACACAACATTGGCAAGAAGATGTCCTGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGACCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000115716.9
ENSMUST00000176472.8
ENSMUST00000177432.8
CDS CAA 90 bp TCTCCAGGTCTTAAATTCTATGGAATCTTCCAAAATGTTCCCATCTaGTCCCAAAGCCAGGCCATTGGTCAAAGAGAGGTTAAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SPGLKFYGIFQNVPI*SQSQAIGQREVKAR
Trigger: CCTGGCCTTAACCTCTCTTTGACCAATGGCCTGGCTTTGGGACAAGATGGGAACATTTTGGAAGATTCCATAGAATTTAAGACCTGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 90 bp CTTGATGGAGTTGTAAAGTGTCTTCAAAAGGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAATTGCTGGCA +
Preference number: 6 (lower is better)
Translates to: LDGVVKCLQKVFGKV*AIVQLVQVGNELLA
Trigger: TGCCAGCAATTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGACACTTTACAACTCCATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS CAA 72 bp GTTGTAAAGTGTCTTCAAAAGGTCTTTGGCAAAGTCTaGGCCATCGTTCAGCTGGTCCAAGTTGGCAATGAA +
Preference number: 6 (lower is better)
Translates to: VVKCLQKVFGKV*AIVQLVQVGNE
Trigger: TTCATTGCCAACTTGGACCAGCTGAACGATGGCCAAGACTTTGCCAAAGACCTTTTGAAGACACTTTACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8
CDS TCA 72 bp CATCCTCATCAATGGCCCATTCCAGCTTTTCGTTCTTaGTGGAGTTGTAAAGTGTCTTCAAAAGGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: HPHQWPIPAFRS*WSCKVSSKGLW
Trigger: CCAAAGACCTTTTGAAGACACTTTACAACTCCATCAAGAACGAAAAGCTGGAATGGGCCATTGATGAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000115716.9
ENSMUST00000175734.2
ENSMUST00000176472.8
ENSMUST00000176873.8
ENSMUST00000177432.8