Pregenerated sensors for PSAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024640Ensembl transcript IDs: ENSMUST00000025542.10, ENSMUST00000162053.8
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTCAATCCAGCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTTaGAACCAGCAGGGCAAAGCCCAAGGCAGTCCACCTAGAGAAGGG | + |
|
Preference number: 1 (lower is better) Translates to: VNPAHRASNLLIITS*NQQGKAQGSPPREG Trigger: CCCTTCTCTAGGTGGACTGCCTTGGGCTTTGCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGGGCTGGATTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR TCA 90 bp | GTTCACAAAACTCTTCCCTGGGAGCTGTGCTGGAAGGGACTCTGCTaGCAGTGTTTGTTCCAAAGTAAAAGGCAAGCAACCACACTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: VHKTLPWELCWKGLC*QCLFQSKRQATTLS Trigger: ACTCAGTGTGGTTGCTTGCCTTTTACTTTGGAACAAACACTGTCAGCAGAGTCCCTTCCAGCACAGCTCCCAGGGAAGAGTTTTGTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CCA 90 bp | GAACGTGTAGATCCTTCTCATGACGCAGCTTTAAAAGGCAGTAGATaGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGT | + |
|
Preference number: 1 (lower is better) Translates to: ERVDPSHDAALKGSR*RAQVTRTDDSHAQS Trigger: ACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATCTACTGCCTTTTAAAGCTGCGTCATGAGAAGGATCTACACGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR CCA 90 bp | ACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTaGTGGAACCTGACCGGAGAAACCAAGCAATCAGTGTCTTCCCCT | + |
|
Preference number: 1 (lower is better) Translates to: TSCNVGSYFNSSPMS*WNLTGETKQSVSSP Trigger: AGGGGAAGACACTGATTGCTTGGTTTCTCCGGTCAGGTTCCACCAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR GCA 90 bp | CACATGAGAATGAAGGTGGCTGTTAGCTGGGAGTTTCCTCAGCTCTaGAGTGCCCTGATGTTTAGTCGTTATTCTTTGAGAAAGGAATCT | + |
|
Preference number: 1 (lower is better) Translates to: HMRMKVAVSWEFPQL*SALMFSRYSLRKES Trigger: AGATTCCTTTCTCAAAGAATAACGACTAAACATCAGGGCACTGCAGAGCTGAGGAAACTCCCAGCTAACAGCCACCTTCATTCTCATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR CCA 90 bp | AACGGCCTAACCGAAAAGCAAAGAATCAACCATTTCTTCTACTTGTaGCAAGAAACGAGAGTCATGGTGGAACGTGTAGATCCTTCTCAT | + |
|
Preference number: 1 (lower is better) Translates to: NGLTEKQRINHFFYL*QETRVMVERVDPSH Trigger: ATGAGAAGGATCTACACGTTCCACCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTTTTCGGTTAGGCCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAACCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCTCAAGGTGGCTGTTAGCTaGGAGTTTCCTCAGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AEPSKLTAVNPAHRASNLKVAVS*EFPQLC Trigger: GCAGAGCTGAGGAAACTCCCAGCTAACAGCCACCTT...GAGGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGGTTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTTGGAACCAGCAGGGCAAGGTGGCTGTTAGCTaGGAGTTTCCTCAGCTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: PAHRASNLLIITSWNQQGKVAVS*EFPQLC Trigger: GCAGAGCTGAGGAAACTCCCAGCTAACAGCCACCTT...GCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGGGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTTCCCCTTGTGCAATCGAATGCAACAGGATGAGCGCAAAGCTGTTCTGCTGCACGTGATCACAGTTTaGGGGTGGAAGGCAGGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: VFPLCNRMQQDERKAVLLHVITV*GWKAGV Trigger: CACCCCTGCCTTCCACCCTCAAACTGTGATCACGTG...CAGCAGAACAGCTTTGCGCTCATCCTGTTGCATTCGATTGCACAAGGGGAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCCCTGGGAGCTGTGCTGGAAGGGACTCTGCTGACAGTGTTTGTTCCAAAGGAGTCGCTGTTGACTTaGACCAACTGCTGCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SSLGAVLEGTLLTVFVPKESLLT*TNCCRT Trigger: GGTTCTGCAGCAGTTGGTTCAAGTCAACAGCGACTC...CTTTGGAACAAACACTGTCAGCAGAGTCCCTTCCAGCACAGCTCCCAGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGCTGTACTCTAAACGACGCTaGGTGCTGCTCACAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: WRAQVTRTDDSHAQSHGLYSKRR*VLLTGR Trigger: TCTGCCTGTGAGCAGCACGCAGCGTCGTTTAGAGTA...CAGCCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGAACCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTTaGAACCAGCAGGGCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: AEPSKLTAVNPAHRASNLLIITS*NQQGKA Trigger: GGCTTTGCCCTGCTGGTTCCAACTGGTTATTATTAG...GAGGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGGTTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR TCA 90 bp | AGATGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGGAGTCGCTGTTGACTTaGACCAACTGCTGCAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: RWRAQVTRTDDSHAQSHGESLLT*TNCCRT Trigger: GGTTCTGCAGCAGTTGGTTCAAGTCAACAGCGACTC...CCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR CCA 90 bp | TCACAAAACTCTTCCCTGGGAGCTGTGCTGGAAGGGACTCTGCTGACAGTGTTTTTAAAAGGCAGTAGATaGAGAGCACAGGTGACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SQNSSLGAVLEGTLLTVFLKGSR*RAQVTR Trigger: TCTAGTCACCTGTGCTCTCCATCTACTGCCTTTTAA...AAACACTGTCAGCAGAGTCCCTTCCAGCACAGCTCCCAGGGAAGAGTTTTGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR-3UTR TCA 90 bp | AATGCAAACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGGATGGAGAGCACAGGTaGCTAGAACGGACGACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NANILQCWVLFQLFTNELDGEHR*LERTTV Trigger: GACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATC...CAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR-3UTR TCA 90 bp | AGACCTCAGCAATGTATAGACCTGGAATATATAGTGTTGCCCTGGTTAAACTACGATGGAGAGCACAGGTaGCTAGAACGGACGACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: RPQQCIDLEYIVLPWLNYDGEHR*LERTTV Trigger: GACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATC...GTAGTTTAACCAGGGCAACACTATATATTCCAGGTCTATACATTGCTGAGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGCAAACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGCTCGTGAGTCGCTGTTaGCTTGAACCAACTGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: NANILQCWVLFQLFTNELLVSRC*LEPTAA Trigger: TGCAGCAGTTGGTTCAAGTCAACAGCGACTCACGAG...CAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CAA 90 bp | TTTAACGGCCTAACCGAAAAGCAAAGAATCAACCATTTCTTCTACTaGTGGCAAGAAACGAGAGTCATGGTGGAACGTGTAGATCCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: FNGLTEKQRINHFFY*WQETRVMVERVDPS Trigger: AGAAGGATCTACACGTTCCACCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTTTTCGGTTAGGCCGTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGCAAACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGAGTGTCTTCCCCTTGTaGAATCGAATGCAACAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: NANILQCWVLFQLFTNELSVFPL*NRMQQD Trigger: ATCCTGTTGCATTCGATTGCACAAGGGGAAGACACT...CAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR-3UTR CCA 90 bp | AATGCAAACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGTCATGCACAAAGTCATaGGCTGAACAAAACTGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: NANILQCWVLFQLFTNELSCTKS*AEQNCF Trigger: GAAACAGTTTTGTTCAGCCCATGACTTTGTGCATGA...CAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CCA 72 bp | GCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTTaGAACCAGCAGGGCAAAGCCCAAGGCAGTCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: AHRASNLLIITS*NQQGKAQGSPP Trigger: AGGTGGACTGCCTTGGGCTTTGCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR TCA 72 bp | ACTCTTCCCTGGGAGCTGTGCTGGAAGGGACTCTGCTaGCAGTGTTTGTTCCAAAGTAAAAGGCAAGCAACC | + |
|
Preference number: 3 (lower is better) Translates to: TLPWELCWKGLC*QCLFQSKRQAT Trigger: GGTTGCTTGCCTTTTACTTTGGAACAAACACTGTCAGCAGAGTCCCTTCCAGCACAGCTCCCAGGGAAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CCA 72 bp | CTTCCAGGTCACATGAGAATGAAGGTGGCTGTTAGCTaGGAGTTTCCTCAGCTCTGCAGTGCCCTGATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPGHMRMKVAVS*EFPQLCSALMF Trigger: AAACATCAGGGCACTGCAGAGCTGAGGAAACTCCCAGCTAACAGCCACCTTCATTCTCATGTGACCTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR GCA 72 bp | GACCGGAGAAACCAAGCAATCAGTGTCTTCCCCTTGTaGAATCGAATGCAACAGGATGAGCGCAAAGCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: DRRNQAISVFPL*NRMQQDERKAV Trigger: AACAGCTTTGCGCTCATCCTGTTGCATTCGATTGCACAAGGGGAAGACACTGATTGCTTGGTTTCTCCGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CCA 72 bp | GATCCTTCTCATGACGCAGCTTTAAAAGGCAGTAGATaGAGAGCACAGGTGACTAGAACGGACGACAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: DPSHDAALKGSR*RAQVTRTDDSH Trigger: ATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATCTACTGCCTTTTAAAGCTGCGTCATGAGAAGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACAAAACTCTTCCCTGGGAGCTGTGCTGGAAGGGACTCTGCTGACAGTGTTTAACCATTTCTTCTACTaGTGGCAAGAAACGAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SQNSSLGAVLEGTLLTVFNHFFY*WQETRV Trigger: GACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTT...AAACACTGTCAGCAGAGTCCCTTCCAGCACAGCTCCCAGGGAAGAGTTTTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR GCA 72 bp | ATGAAGGTGGCTGTTAGCTGGGAGTTTCCTCAGCTCTaGAGTGCCCTGATGTTTAGTCGTTATTCTTTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: MKVAVSWEFPQL*SALMFSRYSLR Trigger: TCTCAAAGAATAACGACTAAACATCAGGGCACTGCAGAGCTGAGGAAACTCCCAGCTAACAGCCACCTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR CCA 72 bp | GTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGGTaGAACCTGACCGGAGAAACCAAGCAATCAGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: VGSYFNSSPMSW*NLTGETKQSVS Trigger: AGACACTGATTGCTTGGTTTCTCCGGTCAGGTTCCACCAGCTCATTGGTGAAGAGTTGAAATAAGACCCAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CCA 72 bp | AATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTaGTGGAACCTGACCGGAGAAACCAAGCAATCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: NVGSYFNSSPMS*WNLTGETKQSV Trigger: CACTGATTGCTTGGTTTCTCCGGTCAGGTTCCACCAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR TCA 72 bp | AGTGTTTGTTCCAAAGTAAAAGGCAAGCAACCACACTaGGTTGCACAAGAACGAAGCCTGACACCTTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SVCSKVKGKQPH*VAQERSLTPLS Trigger: AGACAAAGGTGTCAGGCTTCGTTCTTGTGCAACTCAGTGTGGTTGCTTGCCTTTTACTTTGGAACAAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR CCA 72 bp | ACCGAAAAGCAAAGAATCAACCATTTCTTCTACTTGTaGCAAGAAACGAGAGTCATGGTGGAACGTGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: TEKQRINHFFYL*QETRVMVERVD Trigger: ATCTACACGTTCCACCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTTTTCGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR-3UTR CAA 90 bp | AATGCAAACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGTTTCCATGCAGTCGATaGAAAACACTGATACATGAA | + |
|
Preference number: 3 (lower is better) Translates to: NANILQCWVLFQLFTNELFPCSR*KTLIHE Trigger: TTCATGTATCAGTGTTTTCAATCGACTGCATGGAAA...CAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| 3UTR GCA 72 bp | TGTACTGGGGCATACAAAGTAAGAGCTTGTTTTAAATaGAAACATCCTGCAATGTTGGGTCTTATTTCAACT | + |
|
Preference number: 3 (lower is better) Translates to: CTGAYKVRACFK*KHPAMLGLIST Trigger: AGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATTTAAAACAAGCTCTTACTTTGTATGCCCCAGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGCTGAGCAGCTTGGACAGCTaGTCCATGGGCTCCCGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WRAQVTRTDDSHAQSHGLSSLDS*SMGSRP Trigger: TGGCCGGGAGCCCATGGACCAGCTGTCCAAGCTGCT...CAGCCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162053.8 |
||
| 3UTR CAA 72 bp | AGCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTaGGAACCAGCAGGGCAAAGCCCAAGGCAGTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SPQGLQPPNNNQ*EPAGQSPRQST Trigger: GGTGGACTGCCTTGGGCTTTGCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | AGATGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGTTCCGCAGCCTTAGCTaGCCAAGCTCCGGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RWRAQVTRTDDSHAQSHGFRSLS*PSSGHH Trigger: GTGGTGACCGGAGCTTGGTCAGCTAAGGCTGCGGAA...CCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAACCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCTCCGTCTCCTTTGGCGTTaGCAATGCGAAATGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: AEPSKLTAVNPAHRASNLRLLWR*QCEMGC Trigger: ACATCCCATTTCGCATTGGCAACGCCAAAGGAGACG...GAGGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGAACCAGCAGGGCAAAGCCCAAGGCAGTCCACCTAGAGAAGGGGGCAGCATCAAGGAGATCATGTTaGGTTCTACCGCCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VGTSRAKPKAVHLEKGAASRRSC*VLPPCQ Trigger: TTGACAAGGCGGTAGAACTCAACATGATCTCCTTGA...TGCTGCCCCCTTCTCTAGGTGGACTGCCTTGGGCTTTGCCCTGCTGGTTCCAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAACCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCAAATCTGATGACCTGTaGCTCATTTCGAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQNPANSLLSIQPTGPPTKSDDL*LISSTL Trigger: CAGTGTGCTCGAAATGAGTCACAGGTCATCAGATTT...GGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGGTTCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | CACCTAGAGAAGGGGGCAGCAAAGATGGCTGACAGGCTGAATTCATTTAGAAGATTCCGCAGCCTTAGCTaGCCAAGCTCCGGTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HLEKGAAKMADRLNSFRRFRSLS*PSSGHH Trigger: GTGGTGACCGGAGCTTGGTCAGCTAAGGCTGCGGAA...TCTTCTAAATGAATTCAGCCTGTCAGCCATCTTTGCTGCCCCCTTCTCTAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCTCCTAATACGTCTCCTTTGGCGTTaGCAATGCGAAATGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PSKLTAVNPAHRASNLLIRLLWR*QCEMGC Trigger: ACATCCCATTTCGCATTGGCAACGCCAAAGGAGACG...TATTAGGAGGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTTGGAACCAGCAGGGCAAGCTTCGTCTCCTTTaGCGTTGCCAATGCGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PAHRASNLLIITSWNQQGKLRLL*RCQCEM Trigger: CATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTT...GCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGGGCCTCCAACCTCCTAATAATAACCAGTTGGAACCAGCAGGGCAAAGCCAACGTCTTCGGTTGTaGCAGCGTTATACAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQGLQPPNNNQLEPAGQSQRLRL*QRYTER Trigger: CCTCTCTGTATAACGCTGTCACAACCGAAGACGTTG...GCTTTGCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCTCCTAATACCAAGAAATTCTTCATaGAGGCCGCCAGCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PSKLTAVNPAHRASNLLIPRNSS*RPPASQ Trigger: TTGAGAAGCTGGCGGCCTTCATGAAGAATTTCTTGG...TATTAGGAGGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCCCACAGGGCCTCCAACCTCCTAATAATAACCAGTTGGAACCAGCAGGGCATTCTGGCGCTCCACTaGGCATACATAAAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PAHRASNLLIITSWNQQGILALH*AYIKSL Trigger: CAAGGATTTTATGTATGCCCAGTGGAGCGCCAGAAT...GCCCTGCTGGTTCCAACTGGTTATTATTAGGAGGTTGGAGGCCCTGTGGGCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAAGAATCAACCATTTCTTCTACTTGTGGCAAGAAACGAGAGTCATGGTGTGGACAGCTGGTCCATaGGCTCCCGGCCACGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQRINHFFYLWQETRVMVWTAGP*APGHER Trigger: CCTCTCGTGGCCGGGAGCCCATGGACCAGCTGTCCA...CACCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | GTCTTCCCCTTGTGCAATCGAATGCAACAGGATGAGCGCAAAGCTGTTCTGCTGCCAAGAAATTCTTCATaGAGGCCGCCAGCTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VFPLCNRMQQDERKAVLLPRNSS*RPPASQ Trigger: TTGAGAAGCTGGCGGCCTTCATGAAGAATTTCTTGG...CAGCAGAACAGCTTTGCGCTCATCCTGTTGCATTCGATTGCACAAGGGGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGCTGATTCTGGCGCTCCACTaGGCATACATAAAATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: WRAQVTRTDDSHAQSHGLILALH*AYIKSL Trigger: CAAGGATTTTATGTATGCCCAGTGGAGCGCCAGAAT...CAGCCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCCCTGATGTTTAGTCGTTATTCTTTGAGAAAGGAATCTGTAATAAGCATGCCGAGTGTGGCAGCTTaGCAGGCCCGGGCCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SALMFSRYSLRKESVISMPSVAA*QARAQS Trigger: ACTTTGGGCCCGGGCCTGCCAAGCTGCCACACTCGG...CATGCTTATTACAGATTCCTTTCTCAAAGAATAACGACTAAACATCAGGGCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| CDS-3UTR CCA 90 bp | AGATGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGGTTGCCAATGCGAAATaGGATGTTCATCCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RWRAQVTRTDDSHAQSHGVANAK*DVHPAS Trigger: AGAAGCAGGATGAACATCCCATTTCGCATTGGCAAC...CCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | AATGCAAACATCCTGCAATGTTGGGTCTTATTTCAACTCTTCACCAATGAGCTGCCCCGCCGTTGTTCTTaGTCCATTCCAGGACCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NANILQCWVLFQLFTNELPRRCS*SIPGPC Trigger: GCATGGTCCTGGAATGGATCAAGAACAACGGCGGGG...CAGCTCATTGGTGAAGAGTTGAAATAAGACCCAACATTGCAGGATGTTTGCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025542.10 |
||
| CDS-3UTR TCA 90 bp | CCACGTGATCACAGTTTGAGGGTGGAAGGCAGGGGTGTGACTGAGTTTTGTTTATCAAGGAGATCATGTTaGGTTCTACCGCCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRDHSLRVEGRGVTEFCLSRRSC*VLPPCQ Trigger: TTGACAAGGCGGTAGAACTCAACATGATCTCCTTGA...TAAACAAAACTCAGTCACACCCCTGCCTTCCACCCTCAAACTGTGATCACGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | CACCTAGAGAAGGGGGCAGCAAAGATGGCTGACAGGCTGAATTCATTTAGAAGAAAATCTGATGACCTGTaGCTCATTTCGAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HLEKGAAKMADRLNSFRRKSDDL*LISSTL Trigger: CAGTGTGCTCGAAATGAGTCACAGGTCATCAGATTT...TCTTCTAAATGAATTCAGCCTGTCAGCCATCTTTGCTGCCCCCTTCTCTAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CCA 90 bp | AAGCAAAGAATCAACCATTTCTTCTACTTGTGGCAAGAAACGAGAGTCATGGTGGTTGCCAATGCGAAATaGGATGTTCATCCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQRINHFFYLWQETRVMVVANAK*DVHPAS Trigger: AGAAGCAGGATGAACATCCCATTTCGCATTGGCAAC...CACCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAAAGAATCAACCATTTCTTCTACTTGTGGCAAGAAACGAGAGTCATGGAAGCTTCGTCTCCTTTaGCGTTGCCAATGCGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: KSKESTISSTCGKKRESWKLRLL*RCQCEM Trigger: CATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTT...CCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR CAA 72 bp | CTAACCGAAAAGCAAAGAATCAACCATTTCTTCTACTaGTGGCAAGAAACGAGAGTCATGGTGGAACGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LTEKQRINHFFY*WQETRVMVERV Trigger: TACACGTTCCACCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTTTTCGGTTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTGATGTTTAGTCGTTATTCTTTGAGAAAGGAATCTGTAATAAGCATGTATCAACGTCTTCGGTTGTaGCAGCGTTATACAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALMFSRYSLRKESVISMYQRLRL*QRYTER Trigger: CCTCTCTGTATAACGCTGTCACAACCGAAGACGTTG...ATACATGCTTATTACAGATTCCTTTCTCAAAGAATAACGACTAAACATCAGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| 3UTR CAA 72 bp | CAGCTCTGCAGTGCCCTGATGTTTAGTCGTTATTCTTaGAGAAAGGAATCTGTAATAAGCATGTATTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLCSALMFSRYS*RKESVISMYLG Trigger: TCCCAAATACATGCTTATTACAGATTCCTTTCTCAAAGAATAACGACTAAACATCAGGGCACTGCAGAGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAACCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCATACCAGATAGCAGCTaGGACAGCTGGTCCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQNPANSLLSIQPTGPPTIPDSS*DSWSMG Trigger: GCCCATGGACCAGCTGTCCAAGCTGCTATCTGGTAT...GGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGGTTCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162053.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGCACAGGTGACTAGAACGGACGACAGTCATGCACAAAGTCATGGGCTGGCCCCGCCGTTGTTCTaGATCCATTCCAGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: WRAQVTRTDDSHAQSHGLAPPLF*IHSRTM Trigger: CATGGTCCTGGAATGGATCAAGAACAACGGCGGGGC...CAGCCCATGACTTTGTGCATGACTGTCGTCCGTTCTAGTCACCTGTGCTCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAACCCAGCAAACTCACTGCTGTCAATCCAGCCCACAGGGCCTCCAACCAAAGCTTCGTCTCCTTaGGCGTTGCCAATGCGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQNPANSLLSIQPTGPPTKASSP*ALPMRN Trigger: ATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTT...GGTTGGAGGCCCTGTGGGCTGGATTGACAGCAGTGAGTTTGCTGGGTTCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CAA 90 bp | CCACGTGATCACAGTTTGAGGGTGGAAGGCAGGGGTGTGACTGAGTTTTGTTTAAAAGCTTCGTCTCCTTaGGCGTTGCCAATGCGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PRDHSLRVEGRGVTEFCLKASSP*ALPMRN Trigger: ATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTT...TAAACAAAACTCAGTCACACCCCTGCCTTCCACCCTCAAACTGTGATCACGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS CCA 90 bp | CTACCGCCTTGTCAAGAAACCGCTTTTCCAAAGCTTCGTCTCCTTTaGCGTTGCCAATGCGAAATGGGATGTTCATCCTGCTTCTATTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPCQETAFPKLRLL*RCQCEMGCSSCFYS Trigger: AGAATAGAAGCAGGATGAACATCCCATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTTGGAAAAGCGGTTTCTTGACAAGGCGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAAAGAATCAACCATTTCTTCTACTTGTGGCAAGAAACGAGAGTCATGGGCCCCGCCGTTGTTCTaGATCCATTCCAGGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: KSKESTISSTCGKKRESWAPPLF*IHSRTM Trigger: CATGGTCCTGGAATGGATCAAGAACAACGGCGGGGC...CCATGACTCTCGTTTCTTGCCACAAGTAGAAGAAATGGTTGATTCTTTGCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS CCA 72 bp | CTGCTTCTGGATCTCCAACAATACCAGATAGCAGCTTaGACAGCTGGTCCATGGGCTCCCGGCCACGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LLLDLQQYQIAA*TAGPWAPGHER Trigger: CCTCTCGTGGCCGGGAGCCCATGGACCAGCTGTCCAAGCTGCTATCTGGTATTGTTGGAGATCCAGAAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162053.8 |
||
| CDS CAA 72 bp | CCTCCCACTGACCTGTGCCCCTTCAAGGAGATCATGTaGAGTTCTACCGCCTTGTCAAGAAACCGCTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPTDLCPFKEIM*SSTALSRNRFS Trigger: GGAAAAGCGGTTTCTTGACAAGGCGGTAGAACTCAACATGATCTCCTTGAAGGGGCACAGGTCAGTGGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS TCA 72 bp | CTCCCACTGACCTGTGCCCCTTCAAGGAGATCATGTTaGGTTCTACCGCCTTGTCAAGAAACCGCTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPLTCAPSRRSC*VLPPCQETAFP Trigger: TGGAAAAGCGGTTTCTTGACAAGGCGGTAGAACTCAACATGATCTCCTTGAAGGGGCACAGGTCAGTGGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS GCA 72 bp | CTTTGGCGTTGCCAATGCGAAATGGGATGTTCATCCTaGTTCTATTCTGGCGCTCCACTGGGCATACATAAA | + |
|
Preference number: 6 (lower is better) Translates to: LWRCQCEMGCSS*FYSGAPLGIHK Trigger: TTTATGTATGCCCAGTGGAGCGCCAGAATAGAAGCAGGATGAACATCCCATTTCGCATTGGCAACGCCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS CCA 72 bp | TGTCAAGAAACCGCTTTTCCAAAGCTTCGTCTCCTTTaGCGTTGCCAATGCGAAATGGGATGTTCATCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: CQETAFPKLRLL*RCQCEMGCSSC Trigger: GCAGGATGAACATCCCATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTTGGAAAAGCGGTTTCTTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS CAA 90 bp | TCTACCGCCTTGTCAAGAAACCGCTTTTCCAAAGCTTCGTCTCCTTaGGCGTTGCCAATGCGAAATGGGATGTTCATCCTGCTTCTATTC | + |
|
Preference number: 6 (lower is better) Translates to: STALSRNRFSKASSP*ALPMRNGMFILLLF Trigger: GAATAGAAGCAGGATGAACATCCCATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTTGGAAAAGCGGTTTCTTGACAAGGCGGTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||
| CDS CAA 72 bp | TTGTCAAGAAACCGCTTTTCCAAAGCTTCGTCTCCTTaGGCGTTGCCAATGCGAAATGGGATGTTCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSRNRFSKASSP*ALPMRNGMFIL Trigger: CAGGATGAACATCCCATTTCGCATTGGCAACGCCAAAGGAGACGAAGCTTTGGAAAAGCGGTTTCTTGACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025542.10 ENSMUST00000162053.8 |
||