Pregenerated sensors for PSAPL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043430Ensembl transcript IDs: ENSMUST00000052224.6
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACCTACCCTTACCTACTTGCTCTCACCCTGTAAGGGAGGCCGCTaGCGGGTTTCTCCAGGCCATCAGCATCACAGCATGACAGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LPTLTYLLSPCKGGR*RVSPGHQHHSMTGE Trigger: CTCTCCTGTCATGCTGTGATGCTGATGGCCTGGAGAAACCCGTCAGCGGCCTCCCTTACAGGGTGAGAGCAAGTAGGTAAGGGTAGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR GCA 90 bp | GCAGGAGTAGAGGGGGCAGATAGGACAGAGACAGAAAGACGACACTaGCCAACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: AGVEGADRTETERRH*PTLGNHGFEGQLHS Trigger: AGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTTTCTGTCTCTGTCCTATCTGCCCCCTCTACTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 90 bp | AGAGACAGAAAGACGACACTGCCCAACTTTAGGGAATCATGGTTTTaGAGGTCAGCTCCACTCTGCCCTACCTGCACAGAGCCTCAGTTT | + |
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Preference number: 1 (lower is better) Translates to: RDRKTTLPNFRESWF*RSAPLCPTCTEPQF Trigger: AAACTGAGGCTCTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTTTCTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 90 bp | CAAGAGTCATATAAAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATaGCTCAGGACCCTTCCTCAGAAAAGTCCAGAGTCACTCATGTCC | + |
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Preference number: 1 (lower is better) Translates to: QESYKVQVSLLGGSQ*LRTLPQKSPESLMS Trigger: GGACATGAGTGACTCTGGACTTTTCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTTTATATGACTCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR-3UTR TCA 90 bp | AAAAGTCCAGAGTCACTCATGTCCCAGCTGCACCACTGGGAGCCAGCTGGAGAGATCAGCATCACAGCATaGCAGGAGAGGGTGGCTTAC | + |
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Preference number: 2 (lower is better) Translates to: KSPESLMSQLHHWEPAGEISITA*QERVAY Trigger: GTAAGCCACCCTCTCCTGTCATGCTGTGATGCTGAT...CTCTCCAGCTGGCTCCCAGTGGTGCAGCTGGGACATGAGTGACTCTGGACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR-3UTR TCA 90 bp | ATACCCAATTTCCACCCCAGAGCCATTATACTGACTAGTGACAGTCCCCTCCACTGTAAGGGAGGCCGCTaGCGGGTTTCTCCAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: IPNFHPRAIILTSDSPLHCKGGR*RVSPGH Trigger: ATGGCCTGGAGAAACCCGTCAGCGGCCTCCCTTACA...GTGGAGGGGACTGTCACTAGTCAGTATAATGGCTCTGGGGTGGAAATTGGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGATTCATAGGGTCCCCTTaGGAGGCAGAAGCCTACGGG | + |
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Preference number: 2 (lower is better) Translates to: KSKCPFWVVANDSGPFLRFIGSP*EAEAYG Trigger: CCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAA...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR-3UTR CCA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGACCACTGGGAGCCAGCTaGAGAGATCCTAGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KSKCPFWVVANDSGPFLRPLGAS*RDPSLR Trigger: TCTCAGGCTAGGATCTCTCCAGCTGGCTCCCAGTGG...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR-3UTR TCA 90 bp | GTGACAGTCCCCTCCACCTACCTACCCTTACCTACTTGCTCTCACCCTGTAAGGAGGGAATCATGGTTTTaGAGGTCAGCTCCACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: VTVPSTYLPLPTCSHPVRRESWF*RSAPLC Trigger: GCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCT...CCTTACAGGGTGAGAGCAAGTAGGTAAGGGTAGGTAGGTGGAGGGGACTGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR-3UTR TCA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGATCTATGACATGGGGGTaGCACCCACTTCATAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: KSKCPFWVVANDSGPFLRSMTWG*HPLHRV Trigger: GACCCTATGAAGTGGGTGTCACCCCCATGTCATAGA...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR GCA 72 bp | AGGCTCAGCAGACGACTAGGGTGGACCTCTTGCTACTaGCATTCCACACCCCTCAGGGCTTTCCCCAGGACT | + |
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Preference number: 3 (lower is better) Translates to: RLSRRLGWTSCY*HSTPLRAFPRT Trigger: AGTCCTGGGGAAAGCCCTGAGGGGTGTGGAATGGCAGTAGCAAGAGGTCCACCCTAGTCGTCTGCTGAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR GCA 72 bp | AAACTGAGGCTCAGCAGACGACTAGGGTGGACCTCTTaGTACTGCCATTCCACACCCCTCAGGGCTTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: KLRLSRRLGWTS*YCHSTPLRAFP Trigger: GGGGAAAGCCCTGAGGGGTGTGGAATGGCAGTAGCAAGAGGTCCACCCTAGTCGTCTGCTGAGCCTCAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 72 bp | CTTACCTACTTGCTCTCACCCTGTAAGGGAGGCCGCTaGCGGGTTTCTCCAGGCCATCAGCATCACAGCATG | + |
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Preference number: 3 (lower is better) Translates to: LTYLLSPCKGGR*RVSPGHQHHSM Trigger: CATGCTGTGATGCTGATGGCCTGGAGAAACCCGTCAGCGGCCTCCCTTACAGGGTGAGAGCAAGTAGGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR CCA 72 bp | CACCCCAGATTGCTTAGCACCAGGGCGGCTCAAGTCTaGGTGAGTAGACAAACTCCTCTTGGTGGGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: HPRLLSTRAAQV*VSRQTPLGGTG Trigger: TCCTGTCCCACCAAGAGGAGTTTGTCTACTCACCCAGACTTGAGCCGCCCTGGTGCTAAGCAATCTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 72 bp | CTGCACCACTGGGAGCCAGCTGGAGAGATCCTAGCCTaGGAATACCCAATTTCCACCCCAGAGCCATTATAC | + |
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Preference number: 3 (lower is better) Translates to: LHHWEPAGEILA*EYPISTPEPLY Trigger: GTATAATGGCTCTGGGGTGGAAATTGGGTATTCTCAGGCTAGGATCTCTCCAGCTGGCTCCCAGTGGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR CCA 72 bp | CAGATTAGAAAACTGAGGCTCAGCAGACGACTAGGGTaGACCTCTTGCTACTGCCATTCCACACCCCTCAGG | + |
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Preference number: 3 (lower is better) Translates to: QIRKLRLSRRLG*TSCYCHSTPLR Trigger: CCTGAGGGGTGTGGAATGGCAGTAGCAAGAGGTCCACCCTAGTCGTCTGCTGAGCCTCAGTTTTCTAATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 72 bp | AAGACGACACTGCCCAACTTTAGGGAATCATGGTTTTaGAGGTCAGCTCCACTCTGCCCTACCTGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: KTTLPNFRESWF*RSAPLCPTCTE Trigger: CTCTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR GCA 72 bp | GAGGGGGCAGATAGGACAGAGACAGAAAGACGACACTaGCCAACTTTAGGGAATCATGGTTTTGAAGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: EGADRTETERRH*PTLGNHGFEGQ Trigger: CTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTTTCTGTCTCTGTCCTATCTGCCCCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR CCA 72 bp | ATGGGCAAGAGTCATATAAAGTCCAAGTGTCCCTTTTaGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: MGKSHIKSKCPF*VVANDSGPFLR Trigger: TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTTTATATGACTCTTGCCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 72 bp | TATAAAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATaGCTCAGGACCCTTCCTCAGAAAAGTCCAGAGTCA | + |
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Preference number: 3 (lower is better) Translates to: YKVQVSLLGGSQ*LRTLPQKSPES Trigger: TGACTCTGGACTTTTCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 72 bp | TTGAGGACATCTCTTAAAACTGTCTTAACATCCCTATaGGGCAGGCACGATCCTCCCAGTCTACAGATTAGA | + |
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Preference number: 3 (lower is better) Translates to: LRTSLKTVLTSL*GRHDPPSLQIR Trigger: TCTAATCTGTAGACTGGGAGGATCGTGCCTGCCTCATAGGGATGTTAAGACAGTTTTAAGAGATGTCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR TCA 72 bp | CTGGTCCTGGTAGGTCACTGGGTGCTAGTCTCTAAGTaGAAGAACTTGAGGACATCTCTTAAAACTGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: LVLVGHWVLVSK*KNLRTSLKTVL Trigger: TAAGACAGTTTTAAGAGATGTCCTCAAGTTCTTTCACTTAGAGACTAGCACCCAGTGACCTACCAGGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR GCA 90 bp | GACACCCACTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACCTGGGTTCACCCCATTaGCAGCAGCCGCGGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: DTHFIGSPWEAEAYGWADLGSPH*QQPRPH Trigger: ATGTGGCCGCGGCTGCTGGCAATGGGGTGAACCCAG...GTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAGTGGGTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | CTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACTTTGGGTTACACTCACGGGGAACTaGGATGGGGCTGGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LHRVPLGGRSLRVGRLWVTLTGN*DGAGPG Trigger: GCCAGGGCCAGCCCCATCTCAGTTCCCCGTGAGTGT...AACCCAAAGTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | AAAAGTCCAGAGTCACTCATGTCCCAGCTGCACCACTGGGAGCCAGCTGGAGAGCCGGCAGGGATGGTGTaGTTGCCACAGCCCTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KSPESLMSQLHHWEPAGEPAGMV*LPQPWR Trigger: TCTCCAGGGCTGTGGCAACCACACCATCCCTGCCGG...CTCTCCAGCTGGCTCCCAGTGGTGCAGCTGGGACATGAGTGACTCTGGACTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | CTGACTAGTGACAGTCCCCTCCACCTACCTACCCTTACCTACTTGCTCTCACCCGCCAGGTCAGTCTCCTaGGCGCCACTGAGCATGCTC | + |
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Preference number: 4 (lower is better) Translates to: LTSDSPLHLPTLTYLLSPARSVS*APLSML Trigger: GAGCATGCTCAGTGGCGCTCAGGAGACTGACCTGGC...GGGTGAGAGCAAGTAGGTAAGGGTAGGTAGGTGGAGGGGACTGTCACTAGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGAGCCGCGGCCACATCCTaGCACACACTGCAGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KSKCPFWVVANDSGPFLRAAATS*HTLQGR Trigger: CCTGCCCTGCAGTGTGTGCCAGGATGTGGCCGCGGC...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | CTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACTTTGGGTTCCAGGCCAGGCCCCATaGACTGACACTGATTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: LHRVPLGGRSLRVGRLWVPGQAP*TDTDSG Trigger: TCCAGAATCAGTGTCAGTCCATGGGGCCTGGCCTGG...AACCCAAAGTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | CTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACTTTGGGTTTGGCAGAAGCTGCCCTaGTTTTCCTCATCCACCGGC | + |
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Preference number: 4 (lower is better) Translates to: LHRVPLGGRSLRVGRLWVWQKLP*FSSSTG Trigger: GCCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCCA...AACCCAAAGTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | TCTCACCCTGTAAGGGAGGCCGCTGACGGGTTTCTCCAGGCCATCAGCATCACAATGGTTCACAGAGGGTaGGCGCAGTGCACACAGAAG | + |
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Preference number: 4 (lower is better) Translates to: SHPVREAADGFLQAISITMVHRG*AQCTQK Trigger: CTTCTGTGTGCACTGCGCTCACCCTCTGTGAACCAT...TGTGATGCTGATGGCCTGGAGAAACCCGTCAGCGGCCTCCCTTACAGGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | GACACCCACTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACTTAGCTGAAGACTCCTaGCTTGGAAGCCACTCACAG | + |
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Preference number: 4 (lower is better) Translates to: DTHFIGSPWEAEAYGWADLAEDS*LGSHSQ Trigger: CTGTGAGTGGCTTCCAAGCCAGGAGTCTTCAGCTAA...GTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAGTGGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | CTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACTTTGGGTTCATTTCAGCGGCCTCTaGGCTCTTGCACCAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LHRVPLGGRSLRVGRLWVHFSGL*ALAPEA Trigger: AGCTTCTGGTGCAAGAGCCCAGAGGCCGCTGAAATG...AACCCAAAGTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR GCA 90 bp | GCTGCACCACTGGGAGCCAGCTGGAGAGATCCTAGCCTGAGAATACCCAATTTCCCGACACTTTGCAGCTaGCTGCAGGTCCTGACACCA | + |
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Preference number: 4 (lower is better) Translates to: AAPLGASWRDPSLRIPNFPTLCS*LQVLTP Trigger: TGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGG...GAAATTGGGTATTCTCAGGCTAGGATCTCTCCAGCTGGCTCCCAGTGGTGCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR GCA 90 bp | CTGACTAGTGACAGTCCCCTCCACCTACCTACCCTTACCTACTTGCTCTCACCCACAGCACTCTGGCAGTaGCTCACGGCCCGACACTTT | + |
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Preference number: 4 (lower is better) Translates to: LTSDSPLHLPTLTYLLSPTALWQ*LTARHF Trigger: AAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGT...GGGTGAGAGCAAGTAGGTAAGGGTAGGTAGGTGGAGGGGACTGTCACTAGTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | GCTGCACCACTGGGAGCCAGCTGGAGAGATCCTAGCCTGAGAATACCCAATTTCCGACTCTGTAGCACCTaGGTTCACCCCATTGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AAPLGASWRDPSLRIPNFRLCST*VHPIAS Trigger: GCTGGCAATGGGGTGAACCCAGGTGCTACAGAGTCG...GAAATTGGGTATTCTCAGGCTAGGATCTCTCCAGCTGGCTCCCAGTGGTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| 3UTR CAA 72 bp | AAAACTGAGGCTCAGCAGACGACTAGGGTGGACCTCTaGCTACTGCCATTCCACACCCCTCAGGGCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KTEAQQTTRVDL*LLPFHTPQGFP Trigger: GGGAAAGCCCTGAGGGGTGTGGAATGGCAGTAGCAAGAGGTCCACCCTAGTCGTCTGCTGAGCCTCAGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | ACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCTGCCCTACCTGCACAGCCCTGGAGATGGACCTaGCCCGCCTTTTGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TLGNHGFEGQLHSALPAQPWRWT*PAFCCH Trigger: GTGGCAGCAAAAGGCGGGCCAGGTCCATCTCCAGGG...CTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | AAAAGTCCAGAGTCACTCATGTCCCAGCTGCACCACTGGGAGCCAGCTGGAGAGCGCTTGGTGCTCTTGTaGTCCAGATTCTGGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: KSPESLMSQLHHWEPAGERLVLL*SRFWED Trigger: GTCTTCCCAGAATCTGGACCACAAGAGCACCAAGCG...CTCTCCAGCTGGCTCCCAGTGGTGCAGCTGGGACATGAGTGACTCTGGACTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | GAGACAGAAAGACGACACTGCCCAACTTTAGGGAATCATGGTTTTGAAGGTCAGGAACTGAGATGGGGCTaGCCCTGGCAGCCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: ETERRHCPTLGNHGFEGQELRWG*PWQPPG Trigger: TCCTGGGGGCTGCCAGGGCCAGCCCCATCTCAGTTC...CTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTTTCTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | ACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCTGCCCTACCTGCACAGTGCAGGGCAGGGACTTaGCTGTGGGCTTGTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: TLGNHGFEGQLHSALPAQCRAGT*LWACSR Trigger: TCTGGAACAAGCCCACAGTCAAGTCCCTGCCCTGCA...CTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGATCCGGCAGCCACCTTTaGAGGCATTCAGAATGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KSKCPFWVVANDSGPFLRSGSHL*RHSECP Trigger: GGGACATTCTGAATGCCTTCAAAGGTGGCTGCCGGA...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | CATCTAGTTTATATAAACTTGTTTGATCAGGCTCCCCAGAGACCCTATCGATCCCACGGGGAACTGAGATaGGGCTGGCCCTGGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: HLVYINLFDQAPQRPYRSHGELR*GWPWQP Trigger: GGGCTGCCAGGGCCAGCCCCATCTCAGTTCCCCGTG...GGATCGATAGGGTCTCTGGGGAGCCTGATCAAACAAGTTTATATAAACTAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | CCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGAAAAGTCCAGAGTAGCTGGACACAATCATaGCACACAGCACCTTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PFWVVANDSGPFLRKVQSSWTQS*HTAPSG Trigger: GCCTGAAGGTGCTGTGTGTCATGATTGTGTCCAGCT...ACTCTGGACTTTTCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR GCA 90 bp | CCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGAAAAGTCCAGAGTACCCTTGGCAGAAGCTaGCCTGGTTTTCCTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: PFWVVANDSGPFLRKVQSTLGRS*PGFPHP Trigger: TGGATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGT...ACTCTGGACTTTTCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR GCA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGAGATTCTGGGAAGACATaGCCAGCAGCCTTTTGCACC | + |
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Preference number: 4 (lower is better) Translates to: KSKCPFWVVANDSGPFLRDSGKT*PAAFCT Trigger: GGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATC...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | AAAAGTCCAGAGTCACTCATGTCCCAGCTGCACCACTGGGAGCCAGCTGGAGAGCTCACATACTTTCTCTaGGGTGACTTTGGACATGAG | + |
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Preference number: 4 (lower is better) Translates to: KSPESLMSQLHHWEPAGELTYFL*GDFGHE Trigger: CTCATGTCCAAAGTCACCCCAGAGAAAGTATGTGAG...CTCTCCAGCTGGCTCCCAGTGGTGCAGCTGGGACATGAGTGACTCTGGACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR TCA 90 bp | TCTCACCCTGTAAGGGAGGCCGCTGACGGGTTTCTCCAGGCCATCAGCATCACAACAGGTCTTCATTACTaGTGTCAAAATATCCGACTC | + |
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Preference number: 4 (lower is better) Translates to: SHPVREAADGFLQAISITTGLHY*CQNIRL Trigger: GAGTCGGATATTTTGACATCAGTAATGAAGACCTGT...TGTGATGCTGATGGCCTGGAGAAACCCGTCAGCGGCCTCCCTTACAGGGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CCA 90 bp | CTACAGATTAGAAAACTGAGGCTCAGCAGACGACTAGGGTGGACCTCTTGCTACACTCGCTCCAGTGTGTaGCTGATGAGAGCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQIRKLRLSRRLGWTSCYTRSSV*LMRASV Trigger: CACAGAAGCTCTCATCAGCCACACACTGGAGCGAGT...GTAGCAAGAGGTCCACCCTAGTCGTCTGCTGAGCCTCAGTTTTCTAATCTGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CCA 90 bp | TGGAGAGATCCTAGCCTGAGAATACCCAATTTCCACCCCAGAGCCATTATACTGGACTCTAGAGCATCCTaGAGCAAGGAGATCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WRDPSLRIPNFHPRAIILDSRAS*SKEISW Trigger: CCAGCTGATCTCCTTGCTCCAGGATGCTCTAGAGTC...CAGTATAATGGCTCTGGGGTGGAAATTGGGTATTCTCAGGCTAGGATCTCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CCA 90 bp | CATCTAGTTTATATAAACTTGTTTGATCAGGCTCCCCAGAGACCCTATCGATCCGGAGTCTTAGGGCCGTaGCAGGCCCCCATCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLVYINLFDQAPQRPYRSGVLGP*QAPIFL Trigger: CAAGAAGATGGGGGCCTGCCACGGCCCTAAGACTCC...GGATCGATAGGGTCTCTGGGGAGCCTGATCAAACAAGTTTATATAAACTAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR TCA 90 bp | CATCTAGTTTATATAAACTTGTTTGATCAGGCTCCCCAGAGACCCTATCGATCCCCACTTGCACTTAGCTaGAGACTCCTGGCTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLVYINLFDQAPQRPYRSPLALS*RLLAWK Trigger: CTTCCAAGCCAGGAGTCTTCAGCTAAGTGCAAGTGG...GGATCGATAGGGTCTCTGGGGAGCCTGATCAAACAAGTTTATATAAACTAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS TCA 90 bp | GCGGCCTCTGGGCTCTTGCACCAGAAGCTGGGGCCCATGACGCACTaGTCTGTGCCTAGAAGTGGAGTCTTAGGGCCGTGGCAGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: AASGLLHQKLGPMTH*SVPRSGVLGPWQAP Trigger: GGGGGCCTGCCACGGCCCTAAGACTCCACTTCTAGGCACAGATCAGTGCGTCATGGGCCCCAGCTTCTGGTGCAAGAGCCCAGAGGCCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS TCA 90 bp | CAGCAGCCGCGGCCACATCCTGGCACACACTGCAGGGCAGGGACTTaGCTGTGGGCTTGTTCCAGACAGCACTCTGGCAGTGCCTCACGG | + |
|
Preference number: 5 (lower is better) Translates to: QQPRPHPGTHCRAGT*LWACSRQHSGSASR Trigger: CCGTGAGGCACTGCCAGAGTGCTGTCTGGAACAAGCCCACAGTCAAGTCCCTGCCCTGCAGTGTGTGCCAGGATGTGGCCGCGGCTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 90 bp | GTAGCACCTGGGTTCACCCCATTGCCAGCAGCCGCGGCCACATCCTaGCACACACTGCAGGGCAGGGACTTGACTGTGGGCTTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VAPGFTPLPAAAATS*HTLQGRDLTVGLFQ Trigger: CTGGAACAAGCCCACAGTCAAGTCCCTGCCCTGCAGTGTGTGCCAGGATGTGGCCGCGGCTGCTGGCAATGGGGTGAACCCAGGTGCTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 90 bp | GGCAGAAGCTGCCCTGGTTTTCCTCATCCACCGGCAGGGATGGTGTaGTTGCCACAGCCCTGGAGATGGACCTGGCCCGCCTTTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GRSCPGFPHPPAGMV*LPQPWRWTWPAFCC Trigger: GCAGCAAAAGGCGGGCCAGGTCCATCTCCAGGGCTGTGGCAACCACACCATCCCTGCCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 90 bp | CCAGACAGCACTCTGGCAGTGCCTCACGGCCCGACACTTTGCAGCTaGCTGCAGGTCCTGACACCATACCTCCGAACCCTTGGCACACTC | + |
|
Preference number: 5 (lower is better) Translates to: PDSTLAVPHGPTLCS*LQVLTPYLRTLGTL Trigger: GAGTGTGCCAAGGGTTCGGAGGTATGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | GACACCCACTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACCTGCAGGGCAGGGACTaGACTGTGGGCTTGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: DTHFIGSPWEAEAYGWADLQGRD*TVGLFQ Trigger: CTGGAACAAGCCCACAGTCAAGTCCCTGCCCTGCAG...GTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAGTGGGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 90 bp | CTTGTTCCAGACAGCACTCTGGCAGTGCCTCACGGCCCGACACTTTaGAGCTGCCTGCAGGTCCTGACACCATACCTCCGAACCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVPDSTLAVPHGPTL*SCLQVLTPYLRTLG Trigger: GCCAAGGGTTCGGAGGTATGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTCTGGAACAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCACCACTGGGAGCCAGCTGGAGAGATCCTAGCCTGAGAATACCCAATTTCCCTGGGTTCACCCCATaGCCAGCAGCCGCGGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AAPLGASWRDPSLRIPNFPGFTP*PAAAAT Trigger: TGTGGCCGCGGCTGCTGGCAATGGGGTGAACCCAGG...GAAATTGGGTATTCTCAGGCTAGGATCTCTCCAGCTGGCTCCCAGTGGTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS TCA 90 bp | TCACAGAGGGTGAGCGCAGTGCACACAGAAGCCAGGTCAGTCTCCTaGGCGCCACTGAGCATGCTCAGGACAGCTGCGCTGTGGTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQRVSAVHTEARSVS*APLSMLRTAALWLF Trigger: GAACAACCACAGCGCAGCTGTCCTGAGCATGCTCAGTGGCGCTCAGGAGACTGACCTGGCTTCTGTGTGCACTGCGCTCACCCTCTGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 90 bp | GAGGCGCTGGCAGTGTTCCAGGGCATTACACATTTCAGCGGCCTCTaGGCTCTTGCACCAGAAGCTGGGGCCCATGACGCACTGATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EALAVFQGITHFSGL*ALAPEAGAHDALIC Trigger: ACAGATCAGTGCGTCATGGGCCCCAGCTTCTGGTGCAAGAGCCCAGAGGCCGCTGAAATGTGTAATGCCCTGGAACACTGCCAGCGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 90 bp | TCTGGGAAGACATGCCCAGCAGCCTTTTGCACCCTTGGCAGAAGCTaGCCTGGTTTTCCTCATCCACCGGCAGGGATGGTGTGGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGKTCPAAFCTLGRS*PGFPHPPAGMVWLP Trigger: TGGCAACCACACCATCCCTGCCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | GTGACAGTCCCCTCCACCTACCTACCCTTACCTACTTGCTCTCACCCTGTAAGGTCACGGCCCGACACTTaGCAGCTGCCTGCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VTVPSTYLPLPTCSHPVRSRPDT*QLPAGP Trigger: AGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGA...CCTTACAGGGTGAGAGCAAGTAGGTAAGGGTAGGTAGGTGGAGGGGACTGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | TCTCACCCTGTAAGGGAGGCCGCTGACGGGTTTCTCCAGGCCATCAGCATCACATTGGTCACAAGCCACTaGTCCAGCTCCTGGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SHPVREAADGFLQAISITLVTSH*SSSWTK Trigger: CTTGGTCCAGGAGCTGGACAAGTGGCTTGTGACCAA...TGTGATGCTGATGGCCTGGAGAAACCCGTCAGCGGCCTCCCTTACAGGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 90 bp | TGCTCTTGTGGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTTTTaGACCCTTGGCAGAAGCTGCCCTGGTTTTCCTCATCCACCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CSCGPDSGKTCPAAF*TLGRSCPGFPHPPA Trigger: TGCCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 90 bp | GAATGTCCCGCTTGGTGCTCTTGTGGTCCAGATTCTGGGAAGACATaGCCAGCAGCCTTTTGCACCCTTGGCAGAAGCTGCCCTGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ECPAWCSCGPDSGKT*PAAFCTLGRSCPGF Trigger: AAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCACCAAGCGGGACATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | GGAATCATGGTTTTGAAGGTCAGCTCCACTCTGCCCTACCTGCACAGAGCCTCAATGCCCAGCAGCCTTTaGCACCCTTGGCAGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GIMVLKVSSTLPYLHRASMPSSL*HPWQKL Trigger: CAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCAT...TGAGGCTCTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS TCA 90 bp | TGCACTGCATCACATAAGGCAACGGCAGGATCCGGCAGCCACCTTTaGAGGCATTCAGAATGTCCCGCTTGGTGCTCTTGTGGTCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CTASHKATAGSGSHL*RHSECPAWCSCGPD Trigger: ATCTGGACCACAAGAGCACCAAGCGGGACATTCTGAATGCCTTCAAAGGTGGCTGCCGGATCCTGCCGTTGCCTTATGTGATGCAGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CCA 90 bp | CAGCCACCTTTGAAGGCATTCAGAATGTCCCGCTTGGTGCTCTTGTaGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTTTTGCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: QPPLKAFRMSRLVLL*SRFWEDMPSSLLHP Trigger: AGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCACCAAGCGGGACATTCTGAATGCCTTCAAAGGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | CTTCATAGGGTCCCCTTGGGAGGCAGAAGCCTACGGGTGGGCAGACTTTGGGTTTTGTTCACCATCCACTaGCACTTAGCTGAAGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LHRVPLGGRSLRVGRLWVLFTIH*HLAEDS Trigger: GGAGTCTTCAGCTAAGTGCAAGTGGATGGTGAACAA...AACCCAAAGTCTGCCCACCCGTAGGCTTCTGCCTCCCAAGGGGACCCTATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | AGACGACACTGCCCAACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCTGCAGGGATGGTGTGGTaGCCACAGCCCTGGAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: RRHCPTLGNHGFEGQLHSAGMVW*PQPWRW Trigger: CCATCTCCAGGGCTGTGGCAACCACACCATCCCTGC...AGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | ACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCTGCCCTACCTGCACAGCAGCCTTTTGCACCCTaGGCAGAAGCTGCCCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLGNHGFEGQLHSALPAQQPFAP*AEAALV Trigger: AACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTG...CTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 90 bp | GACTCTAGAGCATCCTGGAGCAAGGAGATCAGCTGGACACAATCATaGCACACAGCACCTTCAGGCATCTGTGATGGGTGGAAGCTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: DSRASWSKEISWTQS*HTAPSGICDGWKLN Trigger: GTTGAGCTTCCACCCATCACAGATGCCTGAAGGTGCTGTGTGTCATGATTGTGTCCAGCTGATCTCCTTGCTCCAGGATGCTCTAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CCA 90 bp | CCGCCTTTTGCTGCCACACAGCTTGATGGTCTCACATACTTTCTCTaGGGTGACTTTGGACATGAGCTGCACCAATTCAGGGCTGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPFAATQLDGLTYFL*GDFGHELHQFRAVG Trigger: ACCTACAGCCCTGAATTGGTGCAGCTCATGTCCAAAGTCACCCCAGAGAAAGTATGTGAGACCATCAAGCTGTGTGGCAGCAAAAGGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | AAGTCCAAGTGTCCCTTTTGGGTGGTAGCCAATGACTCAGGACCCTTCCTCAGAAGAGCTTCTGTGCTGTaGGTCACAAGCCACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSKCPFWVVANDSGPFLRRASVL*VTSHLS Trigger: GGACAAGTGGCTTGTGACCAACAGCACAGAAGCTCT...TCTGAGGAAGGGTCCTGAGTCATTGGCTACCACCCAAAAGGGACACTTGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | ACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCTGCCCTACCTGCACAGTCCCGCTTGGTGCTCTaGTGGTCCAGATTCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TLGNHGFEGQLHSALPAQSRLVL*WSRFWE Trigger: TTCCCAGAATCTGGACCACAAGAGCACCAAGCGGGA...CTGTGCAGGTAGGGCAGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | GAGACAGAAAGACGACACTGCCCAACTTTAGGGAATCATGGTTTTGAAGGTCAGCAGGCCCCCATCTTCTaGCATAGGTCCGTGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ETERRHCPTLGNHGFEGQQAPIF*HRSVGF Trigger: GAACCCCACGGACCTATGCAAGAAGATGGGGGCCTG...CTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTTTCTGTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS-3UTR CAA 90 bp | AGACGACACTGCCCAACTTTAGGGAATCATGGTTTTGAAGGTCAGCTCCACTCTCTGAAGACTCCTGGCTaGGAAGCCACTCACAGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRHCPTLGNHGFEGQLHSLKTPG*EATHRS Trigger: AGACCTGTGAGTGGCTTCCAAGCCAGGAGTCTTCAG...AGAGTGGAGCTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | GAGACAGAAAGACGACACTGCCCAACTTTAGGGAATCATGGTTTTGAAGGTCAGGACTTGACTGTGGGCTaGTTCCAGACAGCACTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETERRHCPTLGNHGFEGQDLTVG*FQTALW Trigger: CCAGAGTGCTGTCTGGAACAAGCCCACAGTCAAGTC...CTGACCTTCAAAACCATGATTCCCTAAAGTTGGGCAGTGTCGTCTTTCTGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | ATACCCAATTTCCACCCCAGAGCCATTATACTGACTAGTGACAGTCCCCTCCACTTCTCTGGGGTGACTTaGGACATGAGCTGCACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: IPNFHPRAIILTSDSPLHFSGVT*DMSCTN Trigger: ATTGGTGCAGCTCATGTCCAAAGTCACCCCAGAGAA...GTGGAGGGGACTGTCACTAGTCAGTATAATGGCTCTGGGGTGGAAATTGGGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | TGGAGAGATCCTAGCCTGAGAATACCCAATTTCCACCCCAGAGCCATTATACTGGAGACCCTGCAATGTTaGCTTAGCAGGGACAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WRDPSLRIPNFHPRAIILETLQC*LSRDKL Trigger: CAGTTTGTCCCTGCTAAGCAAACATTGCAGGGTCTC...CAGTATAATGGCTCTGGGGTGGAAATTGGGTATTCTCAGGCTAGGATCTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS-3UTR CAA 90 bp | ATACCCAATTTCCACCCCAGAGCCATTATACTGACTAGTGACAGTCCCCTCCACTTGCTGCCACACAGCTaGATGGTCTCACATACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPNFHPRAIILTSDSPLHLLPHS*MVSHTF Trigger: GAAAGTATGTGAGACCATCAAGCTGTGTGGCAGCAA...GTGGAGGGGACTGTCACTAGTCAGTATAATGGCTCTGGGGTGGAAATTGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CCA 90 bp | GCGCTGTGGTTGTTCACCATCCACTTGCACTTAGCTGAAGACTCCTaGCTTGGAAGCCACTCACAGGTCTTCATTACTGATGTCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: ALWLFTIHLHLAEDS*LGSHSQVFITDVKI Trigger: TATTTTGACATCAGTAATGAAGACCTGTGAGTGGCTTCCAAGCCAGGAGTCTTCAGCTAAGTGCAAGTGGATGGTGAACAACCACAGCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 72 bp | TGCCCTGGTTTTCCTCATCCACCGGCAGGGATGGTGTaGTTGCCACAGCCCTGGAGATGGACCTGGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: CPGFPHPPAGMV*LPQPWRWTWPA Trigger: GGCGGGCCAGGTCCATCTCCAGGGCTGTGGCAACCACACCATCCCTGCCGGTGGATGAGGAAAACCAGGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 72 bp | CATCCACCGGCAGGGATGGTGTGGTTGCCACAGCCCTaGAGATGGACCTGGCCCGCCTTTTGCTGCCACACA | + |
|
Preference number: 6 (lower is better) Translates to: HPPAGMVWLPQP*RWTWPAFCCHT Trigger: TGTGTGGCAGCAAAAGGCGGGCCAGGTCCATCTCCAGGGCTGTGGCAACCACACCATCCCTGCCGGTGGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 72 bp | GACAGCACTCTGGCAGTGCCTCACGGCCCGACACTTTaGAGCTGCCTGCAGGTCCTGACACCATACCTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: DSTLAVPHGPTL*SCLQVLTPYLR Trigger: TCGGAGGTATGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 72 bp | GAAGCTGCCCTGGTTTTCCTCATCCACCGGCAGGGATaGTGTGGTTGCCACAGCCCTGGAGATGGACCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: EAALVFLIHRQG*CGCHSPGDGPG Trigger: GCCAGGTCCATCTCCAGGGCTGTGGCAACCACACCATCCCTGCCGGTGGATGAGGAAAACCAGGGCAGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CAA 72 bp | AGACAGCACTCTGGCAGTGCCTCACGGCCCGACACTTaGCAGCTGCCTGCAGGTCCTGACACCATACCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RQHSGSASRPDT*QLPAGPDTIPP Trigger: CGGAGGTATGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CAA 90 bp | GCTTGTTCCAGACAGCACTCTGGCAGTGCCTCACGGCCCGACACTTaGCAGCTGCCTGCAGGTCCTGACACCATACCTCCGAACCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ACSRQHSGSASRPDT*QLPAGPDTIPPNPW Trigger: CCAAGGGTTCGGAGGTATGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTCTGGAACAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS TCA 72 bp | GGGCTCTTGCACCAGAAGCTGGGGCCCATGACGCACTaGTCTGTGCCTAGAAGTGGAGTCTTAGGGCCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLLHQKLGPMTH*SVPRSGVLGPW Trigger: CCACGGCCCTAAGACTCCACTTCTAGGCACAGATCAGTGCGTCATGGGCCCCAGCTTCTGGTGCAAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 72 bp | ACTCTGGCAGTGCCTCACGGCCCGACACTTTGCAGCTaGCTGCAGGTCCTGACACCATACCTCCGAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TLAVPHGPTLCS*LQVLTPYLRTL Trigger: AAGGGTTCGGAGGTATGGTGTCAGGACCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 72 bp | TTGACTGTGGGCTTGTTCCAGACAGCACTCTGGCAGTaGCTCACGGCCCGACACTTTGCAGCTGCCTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LTVGLFQTALWQ*LTARHFAAACR Trigger: CCTGCAGGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTCTGGAACAAGCCCACAGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS GCA 72 bp | CTGGTTTTCCTCATCCACCGGCAGGGATGGTGTGGTTaGCACAGCCCTGGAGATGGACCTGGCCCGCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LVFLIHRQGWCG*HSPGDGPGPPF Trigger: AAAAGGCGGGCCAGGTCCATCTCCAGGGCTGTGGCAACCACACCATCCCTGCCGGTGGATGAGGAAAACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
||
| CDS CCA 72 bp | AGGGACTTGACTGTGGGCTTGTTCCAGACAGCACTCTaGCAGTGCCTCACGGCCCGACACTTTGCAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RDLTVGLFQTAL*QCLTARHFAAA Trigger: GGCAGCTGCAAAGTGTCGGGCCGTGAGGCACTGCCAGAGTGCTGTCTGGAACAAGCCCACAGTCAAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CCA 72 bp | GCAGTGTTCCAGGGCATTACACATTTCAGCGGCCTCTaGGCTCTTGCACCAGAAGCTGGGGCCCATGACGCA | + |
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Preference number: 6 (lower is better) Translates to: AVFQGITHFSGL*ALAPEAGAHDA Trigger: TGCGTCATGGGCCCCAGCTTCTGGTGCAAGAGCCCAGAGGCCGCTGAAATGTGTAATGCCCTGGAACACTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 90 bp | GTGGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTTTTGCACCCTaGGCAGAAGCTGCCCTGGTTTTCCTCATCCACCGGCAGGGATGG | + |
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Preference number: 6 (lower is better) Translates to: VVQILGRHAQQPFAP*AEAALVFLIHRQGW Trigger: CCATCCCTGCCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 90 bp | GTGCTCTTGTGGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTTTaGCACCCTTGGCAGAAGCTGCCCTGGTTTTCCTCATCCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: VLLWSRFWEDMPSSL*HPWQKLPWFSSSTG Trigger: GCCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 72 bp | TGCACACAGAAGCCAGGTCAGTCTCCTGAGCGCCACTaGGCATGCTCAGGACAGCTGCGCTGTGGTTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: CTQKPGQSPERH*ACSGQLRCGCS Trigger: TGAACAACCACAGCGCAGCTGTCCTGAGCATGCTCAGTGGCGCTCAGGAGACTGACCTGGCTTCTGTGTGCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 72 bp | GCTGCACCAATTCAGGGCTGTAGGTGTCTACCAGGGTaGTGCACTGTTGGACTAGAGGCTCGGGCACTACGG | + |
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Preference number: 6 (lower is better) Translates to: AAPIQGCRCLPG*CTVGLEARALR Trigger: CCGTAGTGCCCGAGCCTCTAGTCCAACAGTGCATCACCCTGGTAGACACCTACAGCCCTGAATTGGTGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS GCA 72 bp | AGTCTCCTGAGCGCCACTGAGCATGCTCAGGACAGCTaGGCTGTGGTTGTTCACCATCCACTTGCACTTAGC | + |
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Preference number: 6 (lower is better) Translates to: SLLSATEHAQDS*AVVVHHPLALS Trigger: GCTAAGTGCAAGTGGATGGTGAACAACCACAGCGCAGCTGTCCTGAGCATGCTCAGTGGCGCTCAGGAGACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS GCA 72 bp | GCTTGGTGCTCTTGTGGTCCAGATTCTGGGAAGACATaGCCAGCAGCCTTTTGCACCCTTGGCAGAAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AWCSCGPDSGKT*PAAFCTLGRSC Trigger: GCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCACCAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 72 bp | GCGCCACTGAGCATGCTCAGGACAGCTGCGCTGTGGTaGTTCACCATCCACTTGCACTTAGCTGAAGACTCC | + |
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Preference number: 6 (lower is better) Translates to: APLSMLRTAALW*FTIHLHLAEDS Trigger: GGAGTCTTCAGCTAAGTGCAAGTGGATGGTGAACAACCACAGCGCAGCTGTCCTGAGCATGCTCAGTGGCGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 72 bp | GTTGCCACAGCCCTGGAGATGGACCTGGCCCGCCTTTaGCTGCCACACAGCTTGATGGTCTCACATACTTTC | + |
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Preference number: 6 (lower is better) Translates to: VATALEMDLARL*LPHSLMVSHTF Trigger: GAAAGTATGTGAGACCATCAAGCTGTGTGGCAGCAAAAGGCGGGCCAGGTCCATCTCCAGGGCTGTGGCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 72 bp | ATTCTGGGAAGACATGCCCAGCAGCCTTTTGCACCCTaGGCAGAAGCTGCCCTGGTTTTCCTCATCCACCGG | + |
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Preference number: 6 (lower is better) Translates to: ILGRHAQQPFAP*AEAALVFLIHR Trigger: CCGGTGGATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 72 bp | AGTGGAGTCTTAGGGCCGTGGCAGGCCCCCATCTTCTaGCATAGGTCCGTGGGGTTCATCATGAACTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: SGVLGPWQAPIF*HRSVGFIMNLR Trigger: CCTCAAGTTCATGATGAACCCCACGGACCTATGCAAGAAGATGGGGGCCTGCCACGGCCCTAAGACTCCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 90 bp | CTGAGCATGCTCAGGACAGCTGCGCTGTGGTTGTTCACCATCCACTaGCACTTAGCTGAAGACTCCTGGCTTGGAAGCCACTCACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: LSMLRTAALWLFTIH*HLAEDSWLGSHSQV Trigger: GACCTGTGAGTGGCTTCCAAGCCAGGAGTCTTCAGCTAAGTGCAAGTGGATGGTGAACAACCACAGCGCAGCTGTCCTGAGCATGCTCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 90 bp | ACAGCCCTGGAGATGGACCTGGCCCGCCTTTTGCTGCCACACAGCTaGATGGTCTCACATACTTTCTCTGGGGTGACTTTGGACATGAGC | + |
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Preference number: 6 (lower is better) Translates to: TALEMDLARLLLPHS*MVSHTFSGVTLDMS Trigger: GCTCATGTCCAAAGTCACCCCAGAGAAAGTATGTGAGACCATCAAGCTGTGTGGCAGCAAAAGGCGGGCCAGGTCCATCTCCAGGGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 90 bp | CGGCAGCCACCTTTGAAGGCATTCAGAATGTCCCGCTTGGTGCTCTaGTGGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTTTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: RQPPLKAFRMSRLVL*WSRFWEDMPSSLLH Trigger: GTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCACCAAGCGGGACATTCTGAATGCCTTCAAAGGTGGCTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 90 bp | GTGCCTAGAAGTGGAGTCTTAGGGCCGTGGCAGGCCCCCATCTTCTaGCATAGGTCCGTGGGGTTCATCATGAACTTGAGGCTCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: VPRSGVLGPWQAPIF*HRSVGFIMNLRLSM Trigger: CATAGAGAGCCTCAAGTTCATGATGAACCCCACGGACCTATGCAAGAAGATGGGGGCCTGCCACGGCCCTAAGACTCCACTTCTAGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS GCA 72 bp | GGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTTTTaGACCCTTGGCAGAAGCTGCCCTGGTTTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: GPDSGKTCPAAF*TLGRSCPGFPH Trigger: ATGAGGAAAACCAGGGCAGCTTCTGCCAAGGGTGCAAAAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 72 bp | CTCAGGACAGCTGCGCTGTGGTTGTTCACCATCCACTaGCACTTAGCTGAAGACTCCTGGCTTGGAAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LRTAALWLFTIH*HLAEDSWLGSH Trigger: GTGGCTTCCAAGCCAGGAGTCTTCAGCTAAGTGCAAGTGGATGGTGAACAACCACAGCGCAGCTGTCCTGAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 72 bp | GCATCCTGGAGCAAGGAGATCAGCTGGACACAATCATaGCACACAGCACCTTCAGGCATCTGTGATGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASWSKEISWTQS*HTAPSGICDGW Trigger: CCACCCATCACAGATGCCTGAAGGTGCTGTGTGTCATGATTGTGTCCAGCTGATCTCCTTGCTCCAGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 72 bp | TCACATAAGGCAACGGCAGGATCCGGCAGCCACCTTTaGAGGCATTCAGAATGTCCCGCTTGGTGCTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: SHKATAGSGSHL*RHSECPAWCSC Trigger: ACAAGAGCACCAAGCGGGACATTCTGAATGCCTTCAAAGGTGGCTGCCGGATCCTGCCGTTGCCTTATGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CAA 72 bp | CCTTTGAAGGCATTCAGAATGTCCCGCTTGGTGCTCTaGTGGTCCAGATTCTGGGAAGACATGCCCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PLKAFRMSRLVL*WSRFWEDMPSS Trigger: GCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCACCAAGCGGGACATTCTGAATGCCTTCAAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 72 bp | TGCGCTGTGGTTGTTCACCATCCACTTGCACTTAGCTaGAGACTCCTGGCTTGGAAGCCACTCACAGGTCTT | + |
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Preference number: 6 (lower is better) Translates to: CAVVVHHPLALS*RLLAWKPLTGL Trigger: AAGACCTGTGAGTGGCTTCCAAGCCAGGAGTCTTCAGCTAAGTGCAAGTGGATGGTGAACAACCACAGCGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CCA 72 bp | TTGAAGGCATTCAGAATGTCCCGCTTGGTGCTCTTGTaGTCCAGATTCTGGGAAGACATGCCCAGCAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LKAFRMSRLVLL*SRFWEDMPSSL Trigger: AAGGCTGCTGGGCATGTCTTCCCAGAATCTGGACCACAAGAGCACCAAGCGGGACATTCTGAATGCCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS CCA 72 bp | GCTGCCACACAGCTTGATGGTCTCACATACTTTCTCTaGGGTGACTTTGGACATGAGCTGCACCAATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: AATQLDGLTYFL*GDFGHELHQFR Trigger: CCTGAATTGGTGCAGCTCATGTCCAAAGTCACCCCAGAGAAAGTATGTGAGACCATCAAGCTGTGTGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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| CDS TCA 72 bp | CTCCTGGCTTGGAAGCCACTCACAGGTCTTCATTACTaGTGTCAAAATATCCGACTCTGTAGCACCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LLAWKPLTGLHY*CQNIRLCSTWV Trigger: AACCCAGGTGCTACAGAGTCGGATATTTTGACATCAGTAATGAAGACCTGTGAGTGGCTTCCAAGCCAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052224.6 |
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