Pregenerated sensors for PSAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004207Ensembl transcript IDs: ENSMUST00000004316.15, ENSMUST00000105465.8, ENSMUST00000165878.2, ENSMUST00000177779.8, ENSMUST00000179238.8
Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGAACAGGCAGGTCAACAAGAGCTACAGGTGGTGGGAAAGCCGTaGAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCC | + |
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Preference number: 1 (lower is better) Translates to: GEQAGQQELQVVGKP*RTPNSQAEATRSRA Trigger: GGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCACCTGTAGCTCTTGTTGACCTGCCTGTTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR TCA 90 bp | AGGCCACACGGTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTaGCCGTCACACGGCACAGGCAAGTTACATTCACAAGTTTCCCCT | + |
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Preference number: 1 (lower is better) Translates to: RPHGQGPHTQKTRPT*PSHGTGKLHSQVSP Trigger: AGGGGAAACTTGTGAATGTAACTTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGACCGTGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR TCA 90 bp | ATCCCAAGCAAGCCACCTGCAGGTGCTTCTGAAATCTCTGTGCTATaGCAATGGCCATTCCATCGCTCTAAAGGCCTGATCATTCTGTGC | + |
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Preference number: 1 (lower is better) Translates to: IPSKPPAGASEISVL*QWPFHRSKGLIILC Trigger: GCACAGAATGATCAGGCCTTTAGAGCGATGGAATGGCCATTGTCATAGCACAGAGATTTCAGAAGCACCTGCAGGTGGCTTGCTTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAACTCAGAAAATGCTCCTaGCCTCTGGCTCACCACCCC | + |
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Preference number: 2 (lower is better) Translates to: WWESRAGPQTARQRPHGQLRKCS*PLAHHP Trigger: GGGGTGGTGAGCCAGAGGGCAGGAGCATTTTCTGAG...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCTCAGAAAATGCTCCTaGCCTCTGGCTCACCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: SRASHTKDQAHVTVTRHRLRKCS*PLAHHP Trigger: GGGGTGGTGAGCCAGAGGGCAGGAGCATTTTCTGAG...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAACTCAGAAAATGCTCCTaGCCTCTGGCTCACCACCCC | + |
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Preference number: 2 (lower is better) Translates to: RASHTKDQAHVTVTRHRQLRKCS*PLAHHP Trigger: GGGGTGGTGAGCCAGAGGGCAGGAGCATTTTCTGAG...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGCTCAGAAAATGCTCCTaGCCTCTGGCTCACCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: CTGCLLATGGTGSFYSTQLRKCS*PLAHHP Trigger: GGGGTGGTGAGCCAGAGGGCAGGAGCATTTTCTGAG...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGACAGGAAAGCAGAATaGAAGGCTGACCCAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: RASHTKDQAHVTVTRHRQDRKAE*KADPGT Trigger: TGTCCCTGGGTCAGCCTTCCATTCTGCTTTCCTGTC...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGGACAGGAAAGCAGAATaGAAGGCTGACCCAGGGACA | + |
|
Preference number: 2 (lower is better) Translates to: SRASHTKDQAHVTVTRHRDRKAE*KADPGT Trigger: TGTCCCTGGGTCAGCCTTCCATTCTGCTTTCCTGTC...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGAAAGGGCTCAGAAAATaGTCCTGCCCTCTGGCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: AEWKADPGTATSQASHLQKGLRK*SCPLAH Trigger: GTGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTT...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGACCTGCAGGTGCTTCTaGAATCTCTGTGCTATGACA | + |
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Preference number: 2 (lower is better) Translates to: SRASHTKDQAHVTVTRHRTCRCF*NLCAMT Trigger: TGTCATAGCACAGAGATTTCAGAAGCACCTGCAGGT...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACACTTCTGAAATCTCTGTaGTATGACAATGGCCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: CRTPNSQAEATRSRASHTLLKSL*YDNGHS Trigger: GGAATGGCCATTGTCATAGCACAGAGATTTCAGAAG...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGTCCAAAATAACTCCTTaGTACCACAGGAAGCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQSKITP*YHRKLG Trigger: ACCCAGCTTCCTGTGGTACCAAGGAGTTATTTTGGA...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGTCAGCACCTCTTACATaGCAGAAATGCTACAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SRASHTKDQAHVTVTRHRSAPLT*QKCYSK Trigger: CTTACTGTAGCATTTCTGTCATGTAAGAGGTGCTGA...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCATCAGCACCTCTTACATaGCAGAAATGCTACAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: KGLTHKRPGPRDRHTAQASAPLT*QKCYSK Trigger: CTTACTGTAGCATTTCTGTCATGTAAGAGGTGCTGA...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCTTCTGAAATCTCTGTaGTATGACAATGGCCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: SRASHTKDQAHVTVTRHRLLKSL*YDNGHS Trigger: GGAATGGCCATTGTCATAGCACAGAGATTTCAGAAG...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGCTTCTGAAATCTCTGTaGTATGACAATGGCCATTCC | + |
|
Preference number: 2 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQLLKSL*YDNGHS Trigger: GGAATGGCCATTGTCATAGCACAGAGATTTCAGAAG...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGTCCAAAATAACTCCTTaGTACCACAGGAAGCTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: AEWKADPGTATSQASHLQSKITP*YHRKLG Trigger: ACCCAGCTTCCTGTGGTACCAAGGAGTTATTTTGGA...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR TCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGTCAGCACCTCTTACATaGCAGAAATGCTACAGTAAG | + |
|
Preference number: 2 (lower is better) Translates to: AEWKADPGTATSQASHLQSAPLT*QKCYSK Trigger: CTTACTGTAGCATTTCTGTCATGTAAGAGGTGCTGA...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR GCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGCTTCTGAAATCTCTGTaGTATGACAATGGCCATTCC | + |
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Preference number: 2 (lower is better) Translates to: AEWKADPGTATSQASHLQLLKSL*YDNGHS Trigger: GGAATGGCCATTGTCATAGCACAGAGATTTCAGAAG...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTTCAGCACCTCTTACATaGCAGAAATGCTACAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: IDPPHTKKGLRKCSCPLASAPLT*QKCYSK Trigger: CTTACTGTAGCATTTCTGTCATGTAAGAGGTGCTGA...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR TCA 72 bp | ATGGCCCACTGCCAGGCAGACGCTTCACTCATGAGGTaGACAGGCAGGTCAACAAGAGCTACAGGTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: MAHCQADASLMR*TGRSTRATGGG Trigger: CCCACCACCTGTAGCTCTTGTTGACCTGCCTGTTCACCTCATGAGTGAAGCGTCTGCCTGGCAGTGGGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR CCA 72 bp | CATGAGGTGAACAGGCAGGTCAACAAGAGCTACAGGTaGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: HEVNRQVNKSYR*WESRAGPQTAR Trigger: CCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCACCTGTAGCTCTTGTTGACCTGCCTGTTCACCTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR TCA 72 bp | GGTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTaGCCGTCACACGGCACAGGCAAGTTACATTCACAA | + |
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Preference number: 3 (lower is better) Translates to: GQGPHTQKTRPT*PSHGTGKLHSQ Trigger: TTGTGAATGTAACTTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| 3UTR TCA 72 bp | AAGCCACCTGCAGGTGCTTCTGAAATCTCTGTGCTATaGCAATGGCCATTCCATCGCTCTAAAGGCCTGATC | + |
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Preference number: 3 (lower is better) Translates to: KPPAGASEISVL*QWPFHRSKGLI Trigger: GATCAGGCCTTTAGAGCGATGGAATGGCCATTGTCATAGCACAGAGATTTCAGAAGCACCTGCAGGTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAACGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: WWESRAGPQTARQRPHGQRRLLK*LHQLRA Trigger: CGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCG...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAGGGACTGGCAGAGGTTaGGCGCAGAGCACACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTGTGRG*AQSTLP Trigger: GGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCC...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAACGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQRRLLK*LHQLRA Trigger: CGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCG...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGCGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCG | + |
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Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQRRLLK*LHQLRA Trigger: CGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCG...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGGGACTGGCAGAGGTTaGGCGCAGAGCACACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQGTGRG*AQSTLP Trigger: GGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCC...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGGGGACTGGCAGAGGTTaGGCGCAGAGCACACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRGTGRG*AQSTLP Trigger: GGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCC...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGGGACTGGCAGAGGTTaGGCGCAGAGCACACTTCCC | + |
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Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAGTGRG*AQSTLP Trigger: GGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCC...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAGAGGGATGTTGGACATaGAGGGGGCAACCACACGGG | + |
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Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTEGCWT*RGQPHG Trigger: CCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTC...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAAACCCACCATTCTTCTaGGGAGGCACATGGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: WWESRAGPQTARQRPHGQNPPFF*GGTWAG Trigger: GCCCGCCCATGTGCCTCCTCAGAAGAATGGTGGGTT...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGTCTTGGACAGGGCTaGTCAGAGCGGTGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: WWESRAGPQTARQRPHGQGLGQG*SERWPE Trigger: TTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACC...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAACCACCTCCTGGCACTTaGTTCTGGCAGGATCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: WWESRAGPQTARQRPHGQPPPGT*FWQDRG Trigger: TCCCCGATCCTGCCAGAACCAAGTGCCAGGAGGTGG...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAGCAATGCCGACTGCTTaGGCTGTGCGGGCTGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTAMPTA*AVRAAL Trigger: CAAAGCAGCCCGCACAGCCCAAGCAGTCGGCATTGC...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGGTCTGGCAGGAAGCTaGAGCCCTTCTCAAGTGCGG | + |
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Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAGLAGS*SPSQVR Trigger: CCGCACTTGAGAAGGGCTGCAGCTTCCTGCCAGACC...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGGGTCTTGGACAGGGCTaGTCAGAGCGGTGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRGLGQG*SERWPE Trigger: TTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACC...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAACCACCTCCTGGCACTTaGTTCTGGCAGGATCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQPPPGT*FWQDRG Trigger: TCCCCGATCCTGCCAGAACCAAGTGCCAGGAGGTGG...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGCAATGCCGACTGCTTaGGCTGTGCGGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQAMPTA*AVRAAL Trigger: CAAAGCAGCCCGCACAGCCCAAGCAGTCGGCATTGC...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGCAATGCCGACTGCTTaGGCTGTGCGGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAAMPTA*AVRAAL Trigger: CAAAGCAGCCCGCACAGCCCAAGCAGTCGGCATTGC...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGGAGGGATGTTGGACATaGAGGGGGCAACCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQEGCWT*RGQPHG Trigger: CCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTC...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGAACCCACCATTCTTCTaGGGAGGCACATGGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQNPPFF*GGTWAG Trigger: GCCCGCCCATGTGCCTCCTCAGAAGAATGGTGGGTT...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAGCAGCCCTTCTCAAGTaGGGCCAGGATTTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTAALLK*GQDFLL Trigger: AAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGC...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGGGTCTGGCAGGAAGCTaGAGCCCTTCTCAAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQGLAGS*SPSQVR Trigger: CCGCACTTGAGAAGGGCTGCAGCTTCCTGCCAGACC...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGGGTCTTGGACAGGGCTaGTCAGAGCGGTGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQGLGQG*SERWPE Trigger: TTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACC...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGTTCCCACCACCTCCTaGCACTTGGTTCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQVPTTS*HLVLAG Trigger: TCCTGCCAGAACCAAGTGCCAGGAGGTGGTGGGAAC...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGGTTCCCACCACCTCCTaGCACTTGGTTCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRVPTTS*HLVLAG Trigger: TCCTGCCAGAACCAAGTGCCAGGAGGTGGTGGGAAC...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAGCAGTGCAGATACAATaGCTGGCGCAGGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTAVQIQ*LAQAAQ Trigger: TTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGC...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCGGTGTGGGCTCTTTaGGCAGTGCAGATACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQAVWAL*AVQIQW Trigger: CCATTGTATCTGCACTGCTCAAAGAGCCCACACCGC...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGCGGTGTGGGCTCTTTaGGCAGTGCAGATACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQAVWAL*AVQIQW Trigger: CCATTGTATCTGCACTGCTCAAAGAGCCCACACCGC...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGAACCCACCATTCTTCTaGGGAGGCACATGGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQNPPFF*GGTWAG Trigger: GCCCGCCCATGTGCCTCCTCAGAAGAATGGTGGGTT...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCRRLLK*LHQLRA Trigger: CGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCG...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGCAGCCCTTCTCAAGTaGGGCCAGGATTTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAAALLK*GQDFLL Trigger: AAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGC...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGGGTCTTGGACAGGGCTaGTCAGAGCGGTGGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQGLGQG*SERWPE Trigger: TTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACC...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGCCACCTCCTGGCACTTaGTTCTGGCAGGATCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQPPPGT*FWQDRG Trigger: TCCCCGATCCTGCCAGAACCAAGTGCCAGGAGGTGG...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGTGCAGATACAATaGCTGGCGCAGGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQAVQIQ*LAQAAQ Trigger: TTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGC...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCACTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQALLVRV*QEAAAL Trigger: AAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAACATGGCGTTTGCAATaGTCGACAGCATTGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTTWRLQ*STALHR Trigger: CCGATGCAATGCTGTCGATCATTGCAAACGCCATGT...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAACATGGCGTTTGCAATaGTCGACAGCATTGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: WWESRAGPQTARQRPHGQTWRLQ*STALHR Trigger: CCGATGCAATGCTGTCGATCATTGCAAACGCCATGT...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCACCTGGCACTTGGTTCTaGCAGGATCGGGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSPGTWF*QDRGAV Trigger: CACTGCTCCCCGATCCTGCCAGAACCAAGTGCCAGG...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCACCACCTCCTGGCACTTaGTTCTGGCAGGATCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSPPPGT*FWQDRG Trigger: TCCCCGATCCTGCCAGAACCAAGTGCCAGGAGGTGG...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGGCAGTGCAGATACAATaGCTGGCGCAGGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQAVQIQ*LAQAAQ Trigger: TTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGC...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGCTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQLLVRV*QEAAAL Trigger: AAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTGAGGGATGTTGGACATaGAGGGGGCAACCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAEGCWT*RGQPHG Trigger: CCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTC...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGAGGGATGTTGGACATaGAGGGGGCAACCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCEGCWT*RGQPHG Trigger: CCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAACATGGCGTTTGCAATaGTCGACAGCATTGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQTWRLQ*STALHR Trigger: CCGATGCAATGCTGTCGATCATTGCAAACGCCATGT...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGACATGGCGTTTGCAATaGTCGACAGCATTGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQTWRLQ*STALHR Trigger: CCGATGCAATGCTGTCGATCATTGCAAACGCCATGT...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCCGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGRRLLK*LHQLRA Trigger: CGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCG...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGAGAGGACCAGTTTCTTaGACACCTCACAGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRRGPVS*TPHRTH Trigger: GTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCT...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGGCAGCCCTTCTCAAGTaGGGCCAGGATTTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQAALLK*GQDFLL Trigger: AAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGC...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTGGTCTGGCAGGAAGCTaGAGCCCTTCTCAAGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAGLAGS*SPSQVR Trigger: CCGCACTTGAGAAGGGCTGCAGCTTCCTGCCAGACC...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACATCCACACATGGCGTTTaGAATGATCGACAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRTPNSQAEATRSRASHTSTHGV*NDRQHC Trigger: GCAATGCTGTCGATCATTGCAAACGCCATGTGTGGA...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGCCTCCGGGATCTTGTTaGACTCAAGCTGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQPPGSC*TQAVSG Trigger: ACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGG...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCACCTCCGGGATCTTGTTaGACTCAAGCTGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAPPGSC*TQAVSG Trigger: ACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGG...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTGGCACTTGGTTCTaGCAGGATCGGGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCPGTWF*QDRGAV Trigger: CACTGCTCCCCGATCCTGCCAGAACCAAGTGCCAGG...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCCTGGCACTTGGTTCTaGCAGGATCGGGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAPGTWF*QDRGAV Trigger: CACTGCTCCCCGATCCTGCCAGAACCAAGTGCCAGG...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGGCAGTGCAGATACAATaGCTGGCGCAGGCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQAVQIQ*LAQAAQ Trigger: TTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGC...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGCAATGCCGACTGCTTaGGCTGTGCGGGCTGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCAMPTA*AVRAAL Trigger: CAAAGCAGCCCGCACAGCCCAAGCAGTCGGCATTGC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGCTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQLLVRV*QEAAAL Trigger: AAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCATCATTGGCACTCTCTTaGCCTCATTACAGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQASLALS*PHYRSQ Trigger: CTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGA...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGAGAGGACCAGTTTCTTaGACACCTCACAGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQRGPVS*TPHRTH Trigger: GTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCT...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGTCCACACATGGCGTTTaGAATGATCGACAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRSTHGV*NDRQHC Trigger: GCAATGCTGTCGATCATTGCAAACGCCATGTGTGGA...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAATCCTTGGGTTGCATGTaGATCAACATCTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQSLGCM*INIWTQ Trigger: CTGTGTCCAGATGTTGATGCACATGCAACCCAAGGA...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
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| CDS-3UTR CCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGGACTCAAGCTGTTTCTaGTTTTGCTCGGCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRDSSCF*FCSAKY Trigger: GTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTC...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGTGGTCCACGAAGCCCTaGATAAAGCTGGAGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQWSTKP*IKLELV Trigger: GACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCA...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCACACAGATTTCCTTaGGTTGCTGAAGCATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQAHRFP*VAEACA Trigger: TGCACATGCTTCAGCAACCCAAGGAAATCTGTGTGC...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004316.15 |
||
| CDS-3UTR CCA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGACCAGAGTCTTCATTaGCACTCTCTTGACCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: WWESRAGPQTARQRPHGQDQSLH*HSLDLI Trigger: AATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTC...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGTTCCCACCACCTCCTaGCACTTGGTTCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCVPTTS*HLVLAG Trigger: TCCTGCCAGAACCAAGTGCCAGGAGGTGGTGGGAAC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCATGTCTTCGGGTCTTaGACAGGGCTGGTCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCHVFGS*TGLVRG Trigger: GCCTCTGACCAGCCCTGTCCAAGACCCGAAGACATG...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000165878.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGCACACAGATTTCCTTaGGTTGCTGATCCTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAAHRFP*VADPAC Trigger: ACATGCAGGATCAGCAACCCAAGGAAATCTGTGTGC...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGTTCCCAGCTTCGGTaGCAACAGTTTTGCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQASSQLR*QQFCIC Trigger: ACATATGCAAAACTGTTGTCACCGAAGCTGGGAACT...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGAGTTCCCAGCTTCGGTaGCAACAGTTTTGCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: SRASHTKDQAHVTVTRHRSSQLR*QQFCIC Trigger: ACATATGCAAAACTGTTGTCACCGAAGCTGGGAACT...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGAGTTCCCAGCTTCGGTaGCAACAGTTTTGCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQSSQLR*QQFCIC Trigger: ACATATGCAAAACTGTTGTCACCGAAGCTGGGAACT...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGTCATTGGCACTCTCTTaGCCTCATTACAGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQSLALS*PHYRSQ Trigger: CTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGA...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTGCGGTGTGGGCTCTTTaGGCAGTGCAGATACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAAVWAL*AVQIQW Trigger: CCATTGTATCTGCACTGCTCAAAGAGCCCACACCGC...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGCGGTGTGGGCTCTTTaGGCAGTGCAGATACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCAVWAL*AVQIQW Trigger: CCATTGTATCTGCACTGCTCAAAGAGCCCACACCGC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGCAGCCCTTCTCAAGTaGGGCCAGGATTTCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCAALLK*GQDFLL Trigger: AAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGTCCACACATGGCGTTTaGAATGATCGACAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQSTHGV*NDRQHC Trigger: GCAATGCTGTCGATCATTGCAAACGCCATGTGTGGA...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGATGTGCATCAACATCTaGACACAGACCTCGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQMCINI*TQTSEY Trigger: GTATTCCGAGGTCTGTGTCCAGATGTTGATGCACAT...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAGACCAGAGTCTTCATTaGCACTCTCTTGACCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQADQSLH*HSLDLI Trigger: AATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTC...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CCA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCACATAAAATCACATTGTaGGCCTGGACCAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAHKITL*AWTRFC Trigger: GCAGAATCTGGTCCAGGCCCACAATGTGATTTTATG...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR TCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAAGGGACTGGCAGAGGTTaGGCGCAGAGCACACTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWEGTGRG*AQSTLP Trigger: GGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCC...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAAGAGGACCAGTTTCTTaGACACCTCACAGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSRGPVS*TPHRTH Trigger: GTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCT...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR GCA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGGATTTCCTCCTTGGTaGTGTTTTTCTCCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RASHTKDQAHVTVTRHRQGFPPW*CFSPGY Trigger: ATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCC...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGGACTCAAGCTGTTTCTaGTTTTGCTCGGCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQDSSCF*FCSAKY Trigger: GTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTC...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCACCTCCGGGATCTTGTTaGACTCAAGCTGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSPPGSC*TQAVSG Trigger: ACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGG...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCTGGTCCACGAAGCCCTaGATAAAGCTGGAGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCWSTKP*IKLELV Trigger: GACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCA...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGATGTGCATCAACATCTaGACACAGACCTCGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQMCINI*TQTSEY Trigger: GTATTCCGAGGTCTGTGTCCAGATGTTGATGCACAT...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCGTTCCCACCACCTCCTaGCACTTGGTTCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGVPTTS*HLVLAG Trigger: TCCTGCCAGAACCAAGTGCCAGGAGGTGGTGGGAAC...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAAGAGGGATGTTGGACATaGAGGGGGCAACCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWEEGCWT*RGQPHG Trigger: CCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTC...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAAAACCCACCATTCTTCTaGGGAGGCACATGGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWENPPFF*GGTWAG Trigger: GCCCGCCCATGTGCCTCCTCAGAAGAATGGTGGGTT...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTACATGGCGTTTGCAATaGTCGACAGCATTGCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLATWRLQ*STALHR Trigger: CCGATGCAATGCTGTCGATCATTGCAAACGCCATGT...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAATTTCCTTGGGTTGCTaGTCCTGCATGTGCATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSISLGC*SCMCIN Trigger: GTTGATGCACATGCAGGATCAGCAACCCAAGGAAAT...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTAGAGGACCAGTTTCTTaGACACCTCACAGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLARGPVS*TPHRTH Trigger: GTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCT...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCAGAGGACCAGTTTCTTaGACACCTCACAGAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCRGPVS*TPHRTH Trigger: GTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCT...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGGGATTTCCTCCTTGGTaGTGTTTTTCTCCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AEWKADPGTATSQASHLQGFPPW*CFSPGY Trigger: ATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCC...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCATCCACACATGGCGTTTaGAATGATCGACAGCATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSSTHGV*NDRQHC Trigger: GCAATGCTGTCGATCATTGCAAACGCCATGTGTGGA...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAACTCCAGACCATCTGCTaGCAGTGCTTCACGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWELQTIC*QCFTAP Trigger: TGGGGCCGTGAAGCACTGCCAGCAGATGGTCTGGAG...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGGACCAGAGTCTTCATTaGCACTCTCTTGACCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQDQSLH*HSLDLI Trigger: AATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTC...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGCATAAAATCACATTGTaGGCCTGGACCAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQHKITL*AWTRFC Trigger: GCAGAATCTGGTCCAGGCCCACAATGTGATTTTATG...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAACCTGGCACTTGGTTCTaGCAGGATCGGGGAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWEPGTWF*QDRGAV Trigger: CACTGCTCCCCGATCCTGCCAGAACCAAGTGCCAGG...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCCTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGLLVRV*QEAAAL Trigger: AAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAAGTTCCCAGCTTCGGTaGCAACAGTTTTGCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSSSQLR*QQFCIC Trigger: ACATATGCAAAACTGTTGTCACCGAAGCTGGGAACT...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTTCATTGGCACTCTCTTaGCCTCATTACAGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLASLALS*PHYRSQ Trigger: CTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGA...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGGGATTTCCTCCTTGGTaGTGTTTTTCTCCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CTGCLLATGGTGSFYSTQGFPPW*CFSPGY Trigger: ATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCC...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCTGCCTTCCTACCATGTaGATCAACATCTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCCLPTM*INIWTQ Trigger: CTGTGTCCAGATGTTGATGCACATGGTAGGAAGGCA...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGACTCAAGCTGTTTCTaGTTTTGCTCGGCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCDSSCF*FCSAKY Trigger: GTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCTGGTCCACGAAGCCCTaGATAAAGCTGGAGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGWSTKP*IKLELV Trigger: GACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCA...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAATGTGCATCAACATCTaGACACAGACCTCGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSMCINI*TQTSEY Trigger: GTATTCCGAGGTCTGTGTCCAGATGTTGATGCACAT...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCACATAAAATCACATTGTaGGCCTGGACCAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSPTHQERAQKMLLPSGSHKITL*AWTRFC Trigger: GCAGAATCTGGTCCAGGCCCACAATGTGATTTTATG...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAGATTTCCTTGGGTTaGATGTGCATCAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAQISLG*MCINIW Trigger: CCAGATGTTGATGCACATGCAACCCAAGGAAATCTG...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCCCTCCGGGATCTTGTTaGACTCAAGCTGTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGPPGSC*TQAVSG Trigger: ACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGG...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCATGTGCATCAACATCTaGACACAGACCTCGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCMCINI*TQTSEY Trigger: GTATTCCGAGGTCTGTGTCCAGATGTTGATGCACAT...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGACCAGAGTCTTCATTaGCACTCTCTTGACCTCATT | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCDQSLH*HSLDLI Trigger: AATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAACTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWELLVRV*QEAAAL Trigger: AAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAG...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR TCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCTCATTGGCACTCTCTTaGCCTCATTACAGAAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGSLALS*PHYRSQ Trigger: CTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGA...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCGGATTTCCTCCTTGGTaGTGTTTTTCTCCAGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCGFPPW*CFSPGY Trigger: ATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCC...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCGACTCAAGCTGTTTCTaGTTTTGCTCGGCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGDSSCF*FCSAKY Trigger: GTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTC...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAATGGTCCACGAAGCCCTaGATAAAGCTGGAGTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWEWSTKP*IKLELV Trigger: GACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCA...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CCA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCCATAAAATCACATTGTaGGCCTGGACCAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNLGPFNCTGCLLATGGHKITL*AWTRFC Trigger: GCAGAATCTGGTCCAGGCCCACAATGTGATTTTATG...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAATCCTTGGGTTGCATGTaGATCAACATCTGGACACAG | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWESLGCM*INIWTQ Trigger: CTGTGTCCAGATGTTGATGCACATGCAACCCAAGGA...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
||
| CDS-3UTR TCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAAAGTTCCCAGCTTCGGTaGCAACAGTTTTGCATATGT | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWESSQLR*QQFCIC Trigger: ACATATGCAAAACTGTTGTCACCGAAGCTGGGAACT...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR GCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAACAGATTTCCTTGGGTTaGATGTGCATCAACATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWEQISLG*MCINIW Trigger: CCAGATGTTGATGCACATGCAACCCAAGGAAATCTG...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
||
| CDS-3UTR CCA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAACATAAAATCACATTGTaGGCCTGGACCAGATTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IYVFITLDPQVGDFCSWEHKITL*AWTRFC Trigger: GCAGAATCTGGTCCAGGCCCACAATGTGATTTTATG...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 90 bp | GCACTGCTGAGCCCCCAGAGCATGTCTTCGGGTCTTGGACAGGGCTaGTCAGAGCGGTGGCCAGAAGGCTGGCGAAGAGGGCGAGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: ALLSPQSMSSGLGQG*SERWPEGWRRGRGR Trigger: ACGCCCTCGCCCTCTTCGCCAGCCTTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGCTCTGGGGGCTCAGCAGTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS TCA 90 bp | CCGACTGCTTGGGCTGTGCGGGCTGCTTTGGCGGTGTGGGCTCTTTaGGCAGTGCAGATACAATGGCTGGCGCAGGCTGCTCAAGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTAWAVRAALAVWAL*AVQIQWLAQAAQVP Trigger: AGGCACTTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGCTCAAAGAGCCCACACCGCCAAAGCAGCCCGCACAGCCCAAGCAGTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 90 bp | CTCTTTGAGCAGTGCAGATACAATGGCTGGCGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCGGGCAGCACAGAGGCCGATCACACC | + |
|
Preference number: 5 (lower is better) Translates to: LFEQCRYNGWRRLLK*LHQLRAGSTEADHT Trigger: GGTGTGATCGGCCTCTGTGCTGCCCGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGCTCAAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAAGGGACTGGCAGAGGTaGAGCGCAGAGCACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WWESRAGPQTARQRPHGQRDWQR*SAEHTS Trigger: GGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCCT...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS TCA 90 bp | TGCGGGGGTGATCCTGAGGGTACAGCAGGAGAGGGATGTTGGACATaGAGGGGGCAACCACACGGGCCATGTCCACCTCCGGGATCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CGGDPEGTAGEGCWT*RGQPHGPCPPPGSC Trigger: ACAAGATCCCGGAGGTGGACATGGCCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTCTCCTGCTGTACCCTCAGGATCACCCCCGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 90 bp | CTTGGGCTGTGCGGGCTGCTTTGGCGGTGTGGGCTCTTTGAGCAGTaGAGATACAATGGCTGGCGCAGGCTGCTCAAGTGCCTCCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LGLCGLLWRCGLFEQ*RYNGWRRLLKCLHQ Trigger: TTGGTGGAGGCACTTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGCTCAAAGAGCCCACACCGCCAAAGCAGCCCGCACAGCCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGCATGTCTTCGGGTCTaGGACAGGGCTGGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RASHTKDQAHVTVTRHRQACLRV*DRAGQS Trigger: GCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGC...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCATGTCTTCGGGTCTaGGACAGGGCTGGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQACLRV*DRAGQS Trigger: GCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGC...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGAGGGACTGGCAGAGGTaGAGCGCAGAGCACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQRDWQR*SAEHTS Trigger: GGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCCT...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 90 bp | ATGTCGCAAGGAAGGGATTTCGCTGTGGGCTTGCTCCAGACCATCTaGTGGCAGTGCTTCACGGCCCCACAGTCCACCGCCGTCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MSQGRDFAVGLLQTI*WQCFTAPQSTAVFT Trigger: TGTGAAGACGGCGGTGGACTGTGGGGCCGTGAAGCACTGCCAGCAGATGGTCTGGAGCAAGCCCACAGCGAAATCCCTTCCTTGCGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 90 bp | TCGCAAGGAAGGGATTTCGCTGTGGGCTTGCTCCAGACCATCTGCTaGCAGTGCTTCACGGCCCCACAGTCCACCGCCGTCTTCACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SQGRDFAVGLLQTIC*QCFTAPQSTAVFTS Trigger: AGATGTGAAGACGGCGGTGGACTGTGGGGCCGTGAAGCACTGCCAGCAGATGGTCTGGAGCAAGCCCACAGCGAAATCCCTTCCTTGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACACACACTTCCCCAGGGTaGCTCATCTCGCCCTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: CRTPNSQAEATRSRASHTHTSPG*LISPLI Trigger: GATTAAGGGCGAGATGAGCAACCCTGGGGAAGTGTG...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GCAGAATGGAAGGCTGACCCAGGGACAGCAACATCCCAAGCAAGCCACCTGCAGAGGGACTGGCAGAGGTaGAGCGCAGAGCACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AEWKADPGTATSQASHLQRDWQR*SAEHTS Trigger: GGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCCT...CTGCAGGTGGCTTGCTTGGGATGTTGCTGTCCCTGGGTCAGCCTTCCATTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 90 bp | GTCTTCACAGCAGTCTGGACATCAGACACCAGCTTCATACAGTCCTaGCAGACGTCCTCGTTAGCCTTAGGTTGGGGCTGGCTGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VFTAVWTSDTSFIQS*QTSSLALGWGWLRG Trigger: CCCCCGCAGCCAGCCCCAACCTAAGGCTAACGAGGACGTCTGCCAGGACTGTATGAAGCTGGTGTCTGATGTCCAGACTGCTGTGAAGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAACACACTTCCCCAGGGTaGCTCATCTCGCCCTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: RASHTKDQAHVTVTRHRQHTSPG*LISPLI Trigger: GATTAAGGGCGAGATGAGCAACCCTGGGGAAGTGTG...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGACCTCCGGGATCTTGTaGGACTCAAGCTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQTSGIL*DSSCFW Trigger: CCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGT...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAAGCAGTGCGCATGCGTaGCTCAAACCTTTAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWESRAGPQTARQRPHGQSSAHA*LKPLTR Trigger: CCTAGTTAAAGGTTTGAGCAACGCATGCGCACTGCT...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAAGCAGTGCGCATGCGTaGCTCAAACCTTTAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CRTPNSQAEATRSRASHTSSAHA*LKPLTR Trigger: CCTAGTTAAAGGTTTGAGCAACGCATGCGCACTGCT...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 90 bp | ATGTCAGACACGCCTGGCCCCAAGCGGTCACAATCCTCCTTCACGTaGTCCACGAAGCCCTGGATAAAGCTGGAGTTGGTCTTCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: MSDTPGPKRSQSSFT*STKPWIKLELVFTA Trigger: TGCTGTGAAGACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCACGTGAAGGAGGATTGTGACCGCTTGGGGCCAGGCGTGTCTGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 90 bp | CTCGGAATACTGGTCCACGTAGTTCTTGCATATGTCAGACACGCCTaGCCCCAAGCGGTCACAATCCTCCTTCACGTGGTCCACGAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGILVHVVLAYVRHA*PQAVTILLHVVHEA Trigger: GGCTTCGTGGACCACGTGAAGGAGGATTGTGACCGCTTGGGGCCAGGCGTGTCTGACATATGCAAGAACTACGTGGACCAGTATTCCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCATGGATAAAGCTGGAGTaGGTCTTCACAGCAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KGLTHKRPGPRDRHTAQAWIKLE*VFTAVW Trigger: CCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCA...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGTGGATAAAGCTGGAGTaGGTCTTCACAGCAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQWIKLE*VFTAVW Trigger: CCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCA...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGTGGATAAAGCTGGAGTaGGTCTTCACAGCAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRASHTKDQAHVTVTRHRWIKLE*VFTAVW Trigger: CCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCA...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAAGCAGTGCGCATGCGTaGCTCAAACCTTTAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGLTHKRPGPRDRHTAQASSAHA*LKPLTR Trigger: CCTAGTTAAAGGTTTGAGCAACGCATGCGCACTGCT...TGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CAA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAAGCACACAGATTTCCTaGGGTTGCATGTGCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: WWESRAGPQTARQRPHGQSTQIS*GCMCIN Trigger: GTTGATGCACATGCAACCCAAGGAAATCTGTGTGCT...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
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| CDS-3UTR CAA 90 bp | TGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAGGGCCTCACACACAAGCACACAGATTTCCTaGGGTTGCATGTGCATCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CRTPNSQAEATRSRASHTSTQIS*GCMCIN Trigger: GTTGATGCACATGCAACCCAAGGAAATCTGTGTGCT...TGTGTGTGAGGCCCTTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
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| CDS-3UTR CAA 90 bp | TGGTGGGAAAGCCGTGCAGGACCCCAAACAGCCAGGCAGAGGCCACACGGTCAAACAGATTTCCTTGGGTaGCCTTCCTACCATGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: WWESRAGPQTARQRPHGQTDFLG*PSYHVH Trigger: ATGCACATGGTAGGAAGGCAACCCAAGGAAATCTGT...TTGACCGTGTGGCCTCTGCCTGGCTGTTTGGGGTCCTGCACGGCTTTCCCACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
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| CDS TCA 90 bp | TTGTTGGACTCAAGCTGTTTCTGGTTTTGCTCGGCCAAGTACTCCTaGAGGGACTGGCAGAGGTTGAGCGCAGAGCACACTTCCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLDSSCFWFCSAKYS*RDWQRLSAEHTSPG Trigger: CCCTGGGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCCTTCAGGAGTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 90 bp | CTCATACTCAGCCACAAAGTCATCGCACTGCTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTTCTCAAGTGCGGCCAGGATTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LILSHKVIALLLVRV*QEAAALLKCGQDFL Trigger: GAGGAAATCCTGGCCGCACTTGAGAAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGTGCGATGACTTTGTGGCTGAGTATGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CAA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGTGGCATAAAATCACATaGTGGGCCTGGACCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQWHKIT*WAWTRF Trigger: GAATCTGGTCCAGGCCCACAATGTGATTTTATGCCA...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CAA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAATGGCATAAAATCACATaGTGGGCCTGGACCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: RASHTKDQAHVTVTRHRQWHKIT*WAWTRF Trigger: GAATCTGGTCCAGGCCCACAATGTGATTTTATGCCA...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 90 bp | CAGGCAGGTAAGAGTCAACCACCTCCTTGCACGAGGCCGACAGGCTaGAGTCATGAATCCACTCACAGGTCTTCTCCAGGTAATGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QAGKSQPPPCTRPTG*SHESTHRSSPGNEG Trigger: TCCTTCATTACCTGGAGAAGACCTGTGAGTGGATTCATGACTCCAGCCTGTCGGCCTCGTGCAAGGAGGTGGTTGACTCTTACCTGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 90 bp | TCCACGAAGCCCTGGATAAAGCTGGAGTTGGTCTTCACAGCAGTCTaGACATCAGACACCAGCTTCATACAGTCCTGGCAGACGTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: STKPWIKLELVFTAV*TSDTSFIQSWQTSS Trigger: CGAGGACGTCTGCCAGGACTGTATGAAGCTGGTGTCTGATGTCCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCAGGGCTTCGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS-3UTR CAA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCGCATGTCTTCGGGTCTaGGACAGGGCTGGTCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KQNLGPFNCTGCLLATGGACLRV*DRAGQS Trigger: GCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGC...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCACACTTCCCCAGGGTaGCTCATCTCGCCCTTAATC | + |
|
Preference number: 5 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCHTSPG*LISPLI Trigger: GATTAAGGGCGAGATGAGCAACCCTGGGGAAGTGTG...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAACCTCCGGGATCTTGTaGGACTCAAGCTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPTHQERAQKMLLPSGSTSGIL*DSSCFW Trigger: CCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGT...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGACAGATTTCCTTGGGTaGCTGAAGCATGTGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRASHTKDQAHVTVTRHRTDFLG*LKHVHQ Trigger: TTGATGCACATGCTTCAGCAACCCAAGGAAATCTGT...CCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000004316.15 |
||
| CDS-3UTR CAA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGAGCAGTGCGCATGCGTaGCTCAAACCTTTAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: CTGCLLATGGTGSFYSTQSSAHA*LKPLTR Trigger: CCTAGTTAAAGGTTTGAGCAACGCATGCGCACTGCT...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCGCATGTCTTCGGGTCTaGGACAGGGCTGGTCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQNLGPFNCTGCLLATGGACLRV*DRAGQR Trigger: CCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGC...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165878.2 |
||
| CDS-3UTR CAA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGTCGGTGACAACAGTTTaGCATATGTCGCAAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CTGCLLATGGTGSFYSTQSVTTV*HMSQGR Trigger: CCTTCCTTGCGACATATGCAAAACTGTTGTCACCGA...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GAGATGGCCATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCACCTCCGGGATCTTGTaGGACTCAAGCTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: EMAIDPPHTKKGLRKCSCTSGIL*DSSCFW Trigger: CCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGT...GCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTATGGCCATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGGCAATCCTCAGTGGCATTATaGACAATCAGCTCAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RASHTKDQAHVTVTRHRQSSVAL*TISSEN Trigger: GTTTTCTGAGCTGATTGTCAATAATGCCACTGAGGA...TTGCCTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | GTCAAGGGCCTCACACACAAAAGACCAGGCCCACGTGACCGTCACACGGCACAGTCCTCAGTGGCATTATaGACAATCAGCTCAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VKGLTHKRPGPRDRHTAQSSVAL*TISSEN Trigger: GTTTTCTGAGCTGATTGTCAATAATGCCACTGAGGA...CTGTGCCGTGTGACGGTCACGTGGGCCTGGTCTTTTGTGTGTGAGGCCCTTGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCAAGCAGTGCGCATGCGTaGCTCAAACCTTTAACTAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSPTHQERAQKMLLPSGSSSAHA*LKPLTR Trigger: CCTAGTTAAAGGTTTGAGCAACGCATGCGCACTGCT...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTTGGATAAAGCTGGAGTaGGTCTTCACAGCAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAWIKLE*VFTAVW Trigger: CCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCA...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | TGCACAGGCTGTCTCCTGGCAACCGGAGGCACAGGAAGCTTCTACTCTACACAGACAGATTTCCTTGGGTaGCATGTGCATCAACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: CTGCLLATGGTGSFYSTQTDFLG*HVHQHL Trigger: CAGATGTTGATGCACATGCAACCCAAGGAAATCTGT...CTGTGTAGAGTAGAAGCTTCCTGTGCCTCCGGTTGCCAGGAGACAGCCTGTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
||
| CDS CCA 90 bp | GAGGATGTTCTTAATGGTCTCGGTGGCAGGGACCAGAGTCTTCATTaGCACTCTCTTGACCTCATTACAGAAGCCAGCCAGCACACAGAT | + |
|
Preference number: 5 (lower is better) Translates to: EDVLNGLGGRDQSLH*HSLDLITEASQHTD Trigger: ATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTCCCTGCCACCGAGACCATTAAGAACATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 90 bp | GCAGGAAGCTGCAGCCCTTCTCAAGTGCGGCCAGGATTTCCTCCTTaGTGCTGTTTTTCTCCAGGTTATGTTCCAAATAGAGGACCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: AGSCSPSQVRPGFPP*CCFSPGYVPNRGPV Trigger: AACTGGTCCTCTATTTGGAACATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGCAGCTTCCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTTGGCATAAAATCACATaGTGGGCCTGGACCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: IDPPHTKKGLRKCSCPLAWHKIT*WAWTRF Trigger: GAATCTGGTCCAGGCCCACAATGTGATTTTATGCCA...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS TCA 90 bp | ACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTTGCTaGAGCATGTGCATCAACATCTGGACACAGACCTCGGAATACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TSLQKPASTQISLGC*SMCINIWTQTSEYW Trigger: CCAGTATTCCGAGGTCTGTGTCCAGATGTTGATGCACATGCTTCAGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004316.15 |
||
| CDS TCA 90 bp | ACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTTGCTaGTCCTGCATGTGCATCAACATCTGGACACAGACCTCGGAATAC | + |
|
Preference number: 5 (lower is better) Translates to: TSLQKPASTQISLGC*SCMCINIWTQTSEY Trigger: GTATTCCGAGGTCTGTGTCCAGATGTTGATGCACATGCAGGATCAGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179238.8 |
||
| CDS GCA 90 bp | GGAAGCTGCAGCCCTTCTCAAGTGCGGCCAGGATTTCCTCCTTGGTaGTGTTTTTCTCCAGGTTATGTTCCAAATAGAGGACCAGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GSCSPSQVRPGFPPW*CFSPGYVPNRGPVS Trigger: AGAAACTGGTCCTCTATTTGGAACATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGCAGCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 90 bp | TTGACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTTaGCTTCCTACCATGTGCATCAACATCTGGACACAGACCTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LTSLQKPASTQISLG*LPTMCINIWTQTSE Trigger: TTCCGAGGTCTGTGTCCAGATGTTGATGCACATGGTAGGAAGGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCTGGATAAAGCTGGAGTaGGTCTTCACAGCAGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQNLGPFNCTGCLLATGGWIKLE*VFTAVW Trigger: CCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCA...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTCATCCTCAGTGGCATTATaGACAATCAGCTCAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RSPTHQERAQKMLLPSGSSSVAL*TISSEN Trigger: GTTTTCTGAGCTGATTGTCAATAATGCCACTGAGGA...TGAGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAAACCTCCGGGATCTTGTaGGACTCAAGCTGTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IYVFITLDPQVGDFCSWETSGIL*DSSCFW Trigger: CCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGT...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCTGGCATAAAATCACATaGTGGGCCTGGACCAGATTC | + |
|
Preference number: 5 (lower is better) Translates to: KQNLGPFNCTGCLLATGGWHKIT*WAWTRF Trigger: GAATCTGGTCCAGGCCCACAATGTGATTTTATGCCA...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | ATAGATCCCCCACACACCAAGAAAGGGCTCAGAAAATGCTCCTGCCCTCTGGCTTCCTCAGTGGCATTATaGACAATCAGCTCAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IDPPHTKKGLRKCSCPLASSVAL*TISSEN Trigger: GTTTTCTGAGCTGATTGTCAATAATGCCACTGAGGA...AGCCAGAGGGCAGGAGCATTTTCTGAGCCCTTTCTTGGTGTGTGGGGGATCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 90 bp | TGCTGTTTTTCTCCAGGTTATGTTCCAAATAGAGGACCAGTTTCTTaGACACCTCACAGAACCCACCATTCTTCTGAGGAGGCACATGGG | + |
|
Preference number: 5 (lower is better) Translates to: CCFSPGYVPNRGPVS*TPHRTHHSSEEAHG Trigger: CCCATGTGCCTCCTCAGAAGAATGGTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCTATTTGGAACATAACCTGGAGAAAAACAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | ATCTATGTGTTCATTACCCTAGACCCACAAGTAGGTGACTTCTGCAGCTGGGAATCGGTGACAACAGTTTaGCATATGTCGCAAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: IYVFITLDPQVGDFCSWESVTTV*HMSQGR Trigger: CCTTCCTTGCGACATATGCAAAACTGTTGTCACCGA...TTCCCAGCTGCAGAAGTCACCTACTTGTGGGTCTAGGGTAATGAACACATAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAATCTAGGTCCATTTAACTGCACAGGCTGTCTCCTGGCAACCGGAGGCTCCTCAGTGGCATTATaGACAATCAGCTCAGAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KQNLGPFNCTGCLLATGGSSVAL*TISSEN Trigger: GTTTTCTGAGCTGATTGTCAATAATGCCACTGAGGA...GCCTCCGGTTGCCAGGAGACAGCCTGTGCAGTTAAATGGACCTAGATTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 72 bp | CAGTGCAGATACAATGGCTGGCGCAGGCTGCTCAAGTaGCTCCACCAACTCCGGGCGGGCAGCACAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QCRYNGWRRLLK*LHQLRAGSTEA Trigger: GGCCTCTGTGCTGCCCGCCCGGAGTTGGTGGAGGCACTTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | AGCCCCCAGAGCATGTCTTCGGGTCTTGGACAGGGCTaGTCAGAGCGGTGGCCAGAAGGCTGGCGAAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPQSMSSGLGQG*SERWPEGWRRG Trigger: CCCTCTTCGCCAGCCTTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGCTCTGGGGGCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | TCTGAGGAGGCACATGGGCGGGCAATGCCGACTGCTTaGGCTGTGCGGGCTGCTTTGGCGGTGTGGGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SEEAHGRAMPTA*AVRAALAVWAL Trigger: AAGAGCCCACACCGCCAAAGCAGCCCGCACAGCCCAAGCAGTCGGCATTGCCCGCCCATGTGCCTCCTCAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 72 bp | GGAAGGGATTTCGCTGTGGGCTTGCTCCAGACCATCTaGTGGCAGTGCTTCACGGCCCCACAGTCCACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRDFAVGLLQTI*WQCFTAPQSTA Trigger: GGCGGTGGACTGTGGGGCCGTGAAGCACTGCCAGCAGATGGTCTGGAGCAAGCCCACAGCGAAATCCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | AGCACTGCTGAGCCCCCAGAGCATGTCTTCGGGTCTTaGACAGGGCTGGTCAGAGCGGTGGCCAGAAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: STAEPPEHVFGS*TGLVRAVARRL Trigger: CAGCCTTCTGGCCACCGCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGCTCTGGGGGCTCAGCAGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | AGGGATTTCGCTGTGGGCTTGCTCCAGACCATCTGCTaGCAGTGCTTCACGGCCCCACAGTCCACCGCCGTC | + |
|
Preference number: 6 (lower is better) Translates to: RDFAVGLLQTIC*QCFTAPQSTAV Trigger: GACGGCGGTGGACTGTGGGGCCGTGAAGCACTGCCAGCAGATGGTCTGGAGCAAGCCCACAGCGAAATCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | GGGAGGGGCCAAATGTTCCCACCACCTCCTGGCACTTaGTTCTGGCAGGATCGGGGAGCAGTGCGCATGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GRGQMFPPPPGT*FWQDRGAVRMR Trigger: ACGCATGCGCACTGCTCCCCGATCCTGCCAGAACCAAGTGCCAGGAGGTGGTGGGAACATTTGGCCCCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CAA 90 bp | GCCGACTGCTTGGGCTGTGCGGGCTGCTTTGGCGGTGTGGGCTCTTaGAGCAGTGCAGATACAATGGCTGGCGCAGGCTGCTCAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ADCLGCAGCFGGVGS*SSADTMAGAGCSSA Trigger: GGCACTTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGCTCAAAGAGCCCACACCGCCAAAGCAGCCCGCACAGCCCAAGCAGTCGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 72 bp | TTCGCTGTGGGCTTGCTCCAGACCATCTGCTGGCAGTaGTTCACGGCCCCACAGTCCACCGCCGTCTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: FAVGLLQTICWQ*FTAPQSTAVFT Trigger: TGTGAAGACGGCGGTGGACTGTGGGGCCGTGAAGCACTGCCAGCAGATGGTCTGGAGCAAGCCCACAGCGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CAA 72 bp | TTGGGCTGTGCGGGCTGCTTTGGCGGTGTGGGCTCTTaGAGCAGTGCAGATACAATGGCTGGCGCAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LGCAGCFGGVGS*SSADTMAGAGC Trigger: GCAGCCTGCGCCAGCCATTGTATCTGCACTGCTCAAAGAGCCCACACCGCCAAAGCAGCCCGCACAGCCCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS TCA 72 bp | GTCCACCGCCGTCTTCACATCTCTGCACAGCACTGCTaGGCCCCCAGAGCATGTCTTCGGGTCTTGGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VHRRLHISAQHC*APRACLRVLDR Trigger: CCTGTCCAAGACCCGAAGACATGCTCTGGGGGCTCAGCAGTGCTGTGCAGAGATGTGAAGACGGCGGTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS TCA 72 bp | GATCCTGAGGGTACAGCAGGAGAGGGATGTTGGACATaGAGGGGGCAACCACACGGGCCATGTCCACCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: DPEGTAGEGCWT*RGQPHGPCPPP Trigger: CGGAGGTGGACATGGCCCGTGTGGTTGCCCCCTTCATGTCCAACATCCCTCTCCTGCTGTACCCTCAGGATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 72 bp | TGCGGGCTGCTTTGGCGGTGTGGGCTCTTTGAGCAGTaGAGATACAATGGCTGGCGCAGGCTGCTCAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: CGLLWRCGLFEQ*RYNGWRRLLKC Trigger: GCACTTGAGCAGCCTGCGCCAGCCATTGTATCTGCACTGCTCAAAGAGCCCACACCGCCAAAGCAGCCCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CAA 72 bp | CATACAGTCCTGGCAGACGTCCTCGTTAGCCTTAGGTaGGGGCTGGCTGCGGGGGTGATCCTGAGGGTACAG | + |
|
Preference number: 6 (lower is better) Translates to: HTVLADVLVSLR*GLAAGVILRVQ Trigger: CTGTACCCTCAGGATCACCCCCGCAGCCAGCCCCAACCTAAGGCTAACGAGGACGTCTGCCAGGACTGTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS TCA 72 bp | GCTCGGCCAAGTACTCCTGAAGGGACTGGCAGAGGTTaGGCGCAGAGCACACTTCCCCAGGGTTGCTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: ARPSTPEGTGRG*AQSTLPQGCSS Trigger: AGATGAGCAACCCTGGGGAAGTGTGCTCTGCGCTCAACCTCTGCCAGTCCCTTCAGGAGTACTTGGCCGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | ACGCCTGGCCCCAAGCGGTCACAATCCTCCTTCACGTaGTCCACGAAGCCCTGGATAAAGCTGGAGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TPGPKRSQSSFT*STKPWIKLELV Trigger: GACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCACGTGAAGGAGGATTGTGACCGCTTGGGGCCAGGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | AGCACTGCTGAGCCCCCAGAGCATGTCTTCGGGTCTTaGACAGGGCTGGTCAGAGGCATCACGAGAGTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: STAEPPEHVFGS*TGLVRGITRVC Trigger: GCAAACTCTCGTGATGCCTCTGACCAGCCCTGTCCAAGACCCGAAGACATGCTCTGGGGGCTCAGCAGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165878.2 |
||
| CDS CAA 72 bp | GGGGCAACCACACGGGCCATGTCCACCTCCGGGATCTaGTTGGACTCAAGCTGTTTCTGGTTTTGCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GATTRAMSTSGI*LDSSCFWFCSA Trigger: GGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGTGGACATGGCCCGTGTGGTTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS GCA 72 bp | CATCGCACTGCTTCTGGTAAGGGTCTGGCAGGAAGCTaGAGCCCTTCTCAAGTGCGGCCAGGATTTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: HRTASGKGLAGS*SPSQVRPGFPP Trigger: AGGAGGAAATCCTGGCCGCACTTGAGAAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGTGCGATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | AGCCACAAAGTCATCGCACTGCTTCTGGTAAGGGTCTaGCAGGAAGCTGCAGCCCTTCTCAAGTGCGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SHKVIALLLVRV*QEAAALLKCGQ Trigger: CTGGCCGCACTTGAGAAGGGCTGCAGCTTCCTGCCAGACCCTTACCAGAAGCAGTGCGATGACTTTGTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CAA 90 bp | GACATGAAGGGGGCAACCACACGGGCCATGTCCACCTCCGGGATCTaGTTGGACTCAAGCTGTTTCTGGTTTTGCTCGGCCAAGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: DMKGATTRAMSTSGI*LDSSCFWFCSAKYS Trigger: GGAGTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGTGGACATGGCCCGTGTGGTTGCCCCCTTCATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | CTGGTCCACGTAGTTCTTGCATATGTCAGACACGCCTaGCCCCAAGCGGTCACAATCCTCCTTCACGTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: LVHVVLAYVRHA*PQAVTILLHVV Trigger: GACCACGTGAAGGAGGATTGTGACCGCTTGGGGCCAGGCGTGTCTGACATATGCAAGAACTACGTGGACCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CAA 72 bp | GCAACCACACGGGCCATGTCCACCTCCGGGATCTTGTaGGACTCAAGCTGTTTCTGGTTTTGCTCGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: ATTRAMSTSGIL*DSSCFWFCSAK Trigger: CTTGGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGTGGACATGGCCCGTGTGGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CAA 90 bp | CATGTCCACCTCCGGGATCTTGTTGGACTCAAGCTGTTTCTGGTTTaGCTCGGCCAAGTACTCCTGAAGGGACTGGCAGAGGTTGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: HVHLRDLVGLKLFLV*LGQVLLKGLAEVER Trigger: GCGCTCAACCTCTGCCAGTCCCTTCAGGAGTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGTGGACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
||
| CDS CCA 72 bp | AAGAGTCAACCACCTCCTTGCACGAGGCCGACAGGCTaGAGTCATGAATCCACTCACAGGTCTTCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: KSQPPPCTRPTG*SHESTHRSSPG Trigger: ACCTGGAGAAGACCTGTGAGTGGATTCATGACTCCAGCCTGTCGGCCTCGTGCAAGGAGGTGGTTGACTCTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 72 bp | CAACCACACGGGCCATGTCCACCTCCGGGATCTTGTTaGACTCAAGCTGTTTCTGGTTTTGCTCGGCCAAGT | + |
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Preference number: 6 (lower is better) Translates to: QPHGPCPPPGSC*TQAVSGFARPS Trigger: ACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAGGTGGACATGGCCCGTGTGGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 72 bp | CGGTCACAATCCTCCTTCACGTGGTCCACGAAGCCCTaGATAAAGCTGGAGTTGGTCTTCACAGCAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSQSSFTWSTKP*IKLELVFTAVW Trigger: CCAGACTGCTGTGAAGACCAACTCCAGCTTTATCCAGGGCTTCGTGGACCACGTGAAGGAGGATTGTGACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 72 bp | TTGGTTCTGGCAGGATCGGGGAGCAGTGCGCATGCGTaGCTCAAACCTTTAACTAGGAGCTCCTCAGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVLAGSGSSAHA*LKPLTRSSSVA Trigger: TGCCACTGAGGAGCTCCTAGTTAAAGGTTTGAGCAACGCATGCGCACTGCTCCCCGATCCTGCCAGAACCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS TCA 72 bp | TCAAGCTGTTTCTGGTTTTGCTCGGCCAAGTACTCCTaGAGGGACTGGCAGAGGTTGAGCGCAGAGCACACT | + |
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Preference number: 6 (lower is better) Translates to: SSCFWFCSAKYS*RDWQRLSAEHT Trigger: AGTGTGCTCTGCGCTCAACCTCTGCCAGTCCCTTCAGGAGTACTTGGCCGAGCAAAACCAGAAACAGCTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 72 bp | CTCCGGGATCTTGTTGGACTCAAGCTGTTTCTGGTTTaGCTCGGCCAAGTACTCCTGAAGGGACTGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LRDLVGLKLFLV*LGQVLLKGLAE Trigger: CTCTGCCAGTCCCTTCAGGAGTACTTGGCCGAGCAAAACCAGAAACAGCTTGAGTCCAACAAGATCCCGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS GCA 72 bp | AGTTCCACACATGGCGTTTGCAATGATCGACAGCATTaGATCGGGCGGCAGTCTCCATGTTCTGACACCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSTHGVCNDRQH*IGRQSPCSDTS Trigger: ACTGGTGTCAGAACATGGAGACTGCCGCCCGATGCAATGCTGTCGATCATTGCAAACGCCATGTGTGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CCA 72 bp | CCGATCACACCGCACAGAGAGCTGGGGTTTACCTCATaGATAAAGATGTCCAACAGGGAGGGGCCAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: PITPHRELGFTS*IKMSNREGPNV Trigger: AACATTTGGCCCCTCCCTGTTGGACATCTTTATCCATGAGGTAAACCCCAGCTCTCTGTGCGGTGTGATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 72 bp | TCGGTGGCAGGGACCAGAGTCTTCATTGGCACTCTCTaGACCTCATTACAGAAGCCAGCCAGCACACAGATT | + |
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Preference number: 6 (lower is better) Translates to: SVAGTRVFIGTL*TSLQKPASTQI Trigger: AATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTCCCTGCCACCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 90 bp | TTAATGGTCTCGGTGGCAGGGACCAGAGTCTTCATTGGCACTCTCTaGACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LMVSVAGTRVFIGTL*TSLQKPASTQISLG Trigger: ACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAGAGAGTGCCAATGAAGACTCTGGTCCCTGCCACCGAGACCATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 90 bp | CTTGACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTaGCCTTCCTACCATGTGCATCAACATCTGGACACAGACCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: LDLITEASQHTDFLG*PSYHVHQHLDTDLG Trigger: TCCGAGGTCTGTGTCCAGATGTTGATGCACATGGTAGGAAGGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
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| CDS CAA 90 bp | ACTCTCTTGACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTaGGGTTGCCTTCCTACCATGTGCATCAACATCTGGACACAGACC | + |
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Preference number: 6 (lower is better) Translates to: TLLTSLQKPASTQIS*GCLPTMCINIWTQT Trigger: GGTCTGTGTCCAGATGTTGATGCACATGGTAGGAAGGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
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| CDS GCA 72 bp | TTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTTaGATGTGCATCAACATCTGGACACAGACCTCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LQKPASTQISLG*MCINIWTQTSE Trigger: TTCCGAGGTCTGTGTCCAGATGTTGATGCACATGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
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| CDS GCA 72 bp | TTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTTaGCTTCCTACCATGTGCATCAACATCTGGACACAG | + |
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Preference number: 6 (lower is better) Translates to: LQKPASTQISLG*LPTMCINIWTQ Trigger: CTGTGTCCAGATGTTGATGCACATGGTAGGAAGGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
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| CDS CAA 72 bp | TCTTTCAGCAAGTTCCCAGCTTCGGTGACAACAGTTTaGCATATGTCGCAAGGAAGGGATTTCGCTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SFSKFPASVTTV*HMSQGRDFAVG Trigger: GCCCACAGCGAAATCCCTTCCTTGCGACATATGCAAAACTGTTGTCACCGAAGCTGGGAACTTGCTGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 72 bp | ATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTaGCATGTGCATCAACATCTGGACACAGACCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: ITEASQHTDFLG*HVHQHLDTDLG Trigger: TCCGAGGTCTGTGTCCAGATGTTGATGCACATGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
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| CDS CAA 72 bp | ACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTaGGGTTGCCTTCCTACCATGTGCATCAACATCTGG | + |
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Preference number: 6 (lower is better) Translates to: TSLQKPASTQIS*GCLPTMCINIW Trigger: CCAGATGTTGATGCACATGGTAGGAAGGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177779.8 |
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| CDS CAA 90 bp | GTAGCATTATCTTTCAGCAAGTTCCCAGCTTCGGTGACAACAGTTTaGCATATGTCGCAAGGAAGGGATTTCGCTGTGGGCTTGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VALSFSKFPASVTTV*HMSQGRDFAVGLLQ Trigger: CTGGAGCAAGCCCACAGCGAAATCCCTTCCTTGCGACATATGCAAAACTGTTGTCACCGAAGCTGGGAACTTGCTGAAAGATAATGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 90 bp | CTTGACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTaGCTGAAGCATGTGCATCAACATCTGGACACAGACCTCGGAATA | + |
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Preference number: 6 (lower is better) Translates to: LDLITEASQHTDFLG*LKHVHQHLDTDLGI Trigger: TATTCCGAGGTCTGTGTCCAGATGTTGATGCACATGCTTCAGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000004316.15 |
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| CDS CAA 90 bp | ACTCTCTTGACCTCATTACAGAAGCCAGCCAGCACACAGATTTCCTaGGGTTGCATGTGCATCAACATCTGGACACAGACCTCGGAATAC | + |
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Preference number: 6 (lower is better) Translates to: TLLTSLQKPASTQIS*GCMCINIWTQTSEY Trigger: GTATTCCGAGGTCTGTGTCCAGATGTTGATGCACATGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAATGAGGTCAAGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105465.8 ENSMUST00000165878.2 |
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| CDS GCA 72 bp | AGCCCTTCTCAAGTGCGGCCAGGATTTCCTCCTTGGTaGTGTTTTTCTCCAGGTTATGTTCCAAATAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SPSQVRPGFPPW*CFSPGYVPNRG Trigger: TCCTCTATTTGGAACATAACCTGGAGAAAAACAGCACCAAGGAGGAAATCCTGGCCGCACTTGAGAAGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 72 bp | ATTACAGAAGCCAGCCAGCACACAGATTTCCTTGGGTaGCTGATCCTGCATGTGCATCAACATCTGGACACA | + |
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Preference number: 6 (lower is better) Translates to: ITEASQHTDFLG*LILHVHQHLDT Trigger: TGTGTCCAGATGTTGATGCACATGCAGGATCAGCAACCCAAGGAAATCTGTGTGCTGGCTGGCTTCTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179238.8 |
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| CDS GCA 72 bp | TCTCCAGGTTATGTTCCAAATAGAGGACCAGTTTCTTaGACACCTCACAGAACCCACCATTCTTCTGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SPGYVPNRGPVS*TPHRTHHSSEE Trigger: CTCCTCAGAAGAATGGTGGGTTCTGTGAGGTGTGCAAGAAACTGGTCCTCTATTTGGAACATAACCTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS TCA 72 bp | TTGACAATCAGCTCAGAAAACTTATTCATCACAAACTaGCAGGTCTGGCATAAAATCACATTGTGGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LTISSENLFITN*QVWHKITLWAW Trigger: CCAGGCCCACAATGTGATTTTATGCCAGACCTGTCAGTTTGTGATGAATAAGTTTTCTGAGCTGATTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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| CDS CAA 72 bp | CTCAAACCTTTAACTAGGAGCTCCTCAGTGGCATTATaGACAATCAGCTCAGAAAACTTATTCATCACAAAC | + |
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Preference number: 6 (lower is better) Translates to: LKPLTRSSSVAL*TISSENLFITN Trigger: GTTTGTGATGAATAAGTTTTCTGAGCTGATTGTCAATAATGCCACTGAGGAGCTCCTAGTTAAAGGTTTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000004316.15 ENSMUST00000105465.8 ENSMUST00000165878.2 ENSMUST00000177779.8 ENSMUST00000179238.8 |
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