Pregenerated sensors for PRXL2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021482Ensembl transcript IDs: ENSMUST00000021938.11, ENSMUST00000220895.2, ENSMUST00000221118.2, ENSMUST00000221350.2, ENSMUST00000222570.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATAGCTGCCATTTTGAAGAGCCCAGCTTCACGGTAGCATCTACTTaGGCGAGGAGACTGGAAGCAGTCGGTAGTCCCAAAGTCCCCATC | + |
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Preference number: 1 (lower is better) Translates to: HSCHFEEPSFTVAST*ARRLEAVGSPKVPI Trigger: GATGGGGACTTTGGGACTACCGACTGCTTCCAGTCTCCTCGCCCAAGTAGATGCTACCGTGAAGCTGGGCTCTTCAAAATGGCAGCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221118.2 ENSMUST00000221350.2 |
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| 3UTR GCA 90 bp | AAGAGGGCATCAGATCTTATGGGTGGTTGCAAGCCACCATGTGGTTaGTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: KRASDLMGGCKPPCG*WDLNSGPLEEQSVL Trigger: GAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCCCTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CCA 90 bp | CCAGAAGAGGGCATCAGATCTTATGGGTGGTTGCAAGCCACCATGTaGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGT | + |
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Preference number: 1 (lower is better) Translates to: PEEGIRSYGWLQATM*LLGFELRTFGRAVS Trigger: ACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCCCTCTTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR TCA 90 bp | CAGATCTTATGGGTGGTTGCAAGCCACCATGTGGTTGCTGGGATTTaGACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTATCCACTG | + |
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Preference number: 1 (lower is better) Translates to: QILWVVASHHVVAGI*TQDLWKSSQCSYPL Trigger: CAGTGGATAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CCA 90 bp | AGGGCATCAGATCTTATGGGTGGTTGCAAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTA | + |
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Preference number: 1 (lower is better) Translates to: RASDLMGGCKPPCGC*DLNSGPLEEQSVLL Trigger: TAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR TCA 90 bp | CCAGAGGCTATAAGGTGTTGGATCCATTGGAACTGGAGTTACAGATaGTTGAAAGCTACCATGTGGGTATTAGGAACCAAACCTGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: PEAIRCWIHWNWSYR*LKATMWVLGTKPGS Trigger: GGACCCAGGTTTGGTTCCTAATACCCACATGGTAGCTTTCAATCATCTGTAACTCCAGTTCCAATGGATCCAACACCTTATAGCCTCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CCA 90 bp | TCTCCATTTCTCAGGGCTAGGATTACAAGCCTGTGCCATCATATCTaGCCCCTTCTTCGATTCTCTTCCCTATACACACATATGTATTTC | + |
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Preference number: 1 (lower is better) Translates to: SPFLRARITSLCHHI*PLLRFSSLYTHMYF Trigger: GAAATACATATGTGTGTATAGGGAAGAGAATCGAAGAAGGGGCCAGATATGATGGCACAGGCTTGTAATCCTAGCCCTGAGAAATGGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR TCA 90 bp | CTCGTGAATCACCATATTTGGCTGCACACTTCTTTTTGTTATTTTTaGGACACAATTTCACCATATATAGCCCAGACTGGCCTGGAACTC | + |
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Preference number: 1 (lower is better) Translates to: LVNHHIWLHTSFCYF*DTISPYIAQTGLEL Trigger: GAGTTCCAGGCCAGTCTGGGCTATATATGGTGAAATTGTGTCTCAAAAATAACAAAAAGAAGTGTGCAGCCAAATATGGTGATTCACGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR GCA 90 bp | AAATTATTTATTATTATAAGTAAGTACACTGTAGCTATCTTCAGATaGACCAGAAGAGGGCATCAGATCTTATGGGTGGTTGCAAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: KLFIIISKYTVAIFR*TRRGHQILWVVASH Trigger: GTGGCTTGCAACCACCCATAAGATCTGATGCCCTCTTCTGGTGCATCTGAAGATAGCTACAGTGTACTTACTTATAATAATAAATAATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTTGGCTGCAGAAATACCAAAACTaGCGGGCGGTGGTGGCGCAC | + |
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Preference number: 2 (lower is better) Translates to: NSPRPSCLCFLVNHHIWLQKYQN*RAVVAH Trigger: GTGCGCCACCACCGCCCGGCAGTTTTGGTATTTCTG...CAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CAA 90 bp | CCCCAACTCAGCCAAGCTTATGAGAGAGCACGGGAAATAAAGAGCTaGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCGGTGGTGGCG | + |
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Preference number: 2 (lower is better) Translates to: PQLSQAYERAREIKS*ESKQKYQNCRAVVA Trigger: CGCCACCACCGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTATTTCCCGTGCTCTCTCATAAGCTTGGCTGAGTTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCTGAGCAAACGGCCTTTTCTCCTTTGGGTCTGCAGTGGTACCGCCCCAGATATCAGATCTTTCTaGAACTTGACCATAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GQLSKRPFLLWVCSGTAPDIRSF*NLTIAA Trigger: GGCAGCTATGGTCAAGTTCCAGAAAGATCTGATATC...TGGGGCGGTACCACTGCAGACCCAAAGGAGAAAAGGCCGTTTGCTCAGCTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221118.2 ENSMUST00000221350.2 |
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| 3UTR CAA 90 bp | GGTTGCAAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTaGGAAGAGCAGTCAGTGCTCTTATCCACTGAGCCATCTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: GCKPPCGCWDLNSGP*EEQSVLLSTEPSHQ Trigger: CTGGTGAGATGGCTCAGTGGATAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | AACTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTTGGCTGGATCTTATGGGTGGTTaGAAGCCACCATGTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: NSPRPSCLCFLVNHHIWLDLMGG*KPPCGC Trigger: GCAACCACATGGTGGCTTGCAACCACCCATAAGATC...CAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGAGCTTGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCGGTGGTGGCGACCAAACCTGGGTCCTaGGTCTTCTGCAAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: IKSLESKQKYQNCRAVVATKPGS*VFCKRS Trigger: GCTTCTCTTGCAGAAGACCCAGGACCCAGGTTTGGT...CGCCACCACCGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTAGCACGAAGTGTTGGAGCATGTGGCCAGCTGAGCAAACGGCCTTTTCTCGAACTTGACCATAGCTaGCATTTTGAAGAGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: DLARSVGACGQLSKRPFLELDHS*HFEEPS Trigger: GCTGGGCTCTTCAAAATGGCAGCTATGGTCAAGTTC...GAGAAAAGGCCGTTTGCTCAGCTGGCCACATGCTCCAACACTTCGTGCTAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221118.2 ENSMUST00000221350.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGAGCTTGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCGGTGGTGGCGGTAGCTATCTTCAGATaGACCAGAAGAGGGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: IKSLESKQKYQNCRAVVAVAIFR*TRRGHQ Trigger: CTGATGCCCTCTTCTGGTGCATCTGAAGATAGCTAC...CGCCACCACCGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | AGCATGTGGCCAGCTGAGCAAACGGCCTTTTCTCCTTTGGGTCTGCAGTGGTACGATATCAGATCTTTCTaGAACTTGACCATAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: SMWPAEQTAFSPLGLQWYDIRSF*NLTIAA Trigger: GGCAGCTATGGTCAAGTTCCAGAAAGATCTGATATC...GTACCACTGCAGACCCAAAGGAGAAAAGGCCGTTTGCTCAGCTGGCCACATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000221118.2 ENSMUST00000221350.2 |
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| 3UTR CAA 90 bp | CTATCTTCAGATGCACCAGAAGAGGGCATCAGATCTTATGGGTGGTaGCAAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTT | + |
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Preference number: 2 (lower is better) Translates to: LSSDAPEEGIRSYGW*QATMWLLGFELRTF Trigger: AAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCCCTCTTCTGGTGCATCTGAAGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR TCA 90 bp | GGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTATCCAGTGCTCTTAACCACTaGGTGATTTTTCTAGCGCCC | + |
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Preference number: 2 (lower is better) Translates to: GCWDLNSGPLEEQSVLLSSALNH*VIFLAP Trigger: GGGCGCTAGAAAAATCACTCAGTGGTTAAGAGCACT...GGATAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | AACTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTTGGCTGATATATAGCCCAGACTaGCCTGGAACTCAGTATCTA | + |
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Preference number: 2 (lower is better) Translates to: NSPRPSCLCFLVNHHIWLIYSPD*PGTQYL Trigger: TAGATACTGAGTTCCAGGCCAGTCTGGGCTATATAT...CAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTATCCACTGAGCCATCTCACCAGCCCTGACTTTTTCTCAGAAAGGTTCTCTTGTTTCATAGCCCTATaGAGCCATGGTGCCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SYPLSHLTSPDFFSERFSCFIAL*SHGAWH Trigger: ATGCCAGGCACCATGGCTTCATAGGGCTATGAAACA...AGAGAACCTTTCTGAGAAAAAGTCAGGGCTGGTGAGATGGCTCAGTGGATAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCATCATATCTGGCCCCTTCTTCGATTCTCTTCCCTATACACACATATGTGGGTCCTGGGTCTTCTaGAAGAGAAGCAAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CAIISGPFFDSLPYTHICGSWVF*KRSKCS Trigger: AGAGCACTTGCTTCTCTTGCAGAAGACCCAGGACCC...ACATATGTGTGTATAGGGAAGAGAATCGAAGAAGGGGCCAGATATGATGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCATCATATCTGGCCCCTTCTTCGATTCTCTTCCCTATACACACATATGTTGTTTCATAGCCCTATaGAGCCATGGTGCCTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: CAIISGPFFDSLPYTHICCFIAL*SHGAWH Trigger: ATGCCAGGCACCATGGCTTCATAGGGCTATGAAACA...ACATATGTGTGTATAGGGAAGAGAATCGAAGAAGGGGCCAGATATGATGGCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTATCCACTGAGCCATCTCACCAGCCCTGACTTTTTCTCAGAAAGGTTCTCTATTAGGAACCAAACCTaGGTCCTGGGTCTTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: SYPLSHLTSPDFFSERFSIRNQT*VLGLLQ Trigger: TTGCAGAAGACCCAGGACCCAGGTTTGGTTCCTAAT...AGAGAACCTTTCTGAGAAAAAGTCAGGGCTGGTGAGATGGCTCAGTGGATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGAGCTTGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCGGTGGTGGCGGTACATACACATCTGTaGCTACACTGTTTACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: IKSLESKQKYQNCRAVVAVHTHL*LHCLQS Trigger: ACTCTGTAAACAGTGTAGCCACAGATGTGTATGTAC...CGCCACCACCGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CAA 90 bp | CTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTaGGCTGCACACTTCTTTTTGTTATTTTTGAGACACAATTTCACC | + |
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Preference number: 2 (lower is better) Translates to: LTETLLPLLPRESPY*AAHFFLLFLRHNFT Trigger: GGTGAAATTGTGTCTCAAAAATAACAAAAAGAAGTGTGCAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCCATCATATCTGGCCCCTTCTTCGATTCTCTTCCCTATACACACATATGTAGTGCTCTTAACCACTaGGTGATTTTTCTAGCGCCC | + |
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Preference number: 2 (lower is better) Translates to: CAIISGPFFDSLPYTHICSALNH*VIFLAP Trigger: GGGCGCTAGAAAAATCACTCAGTGGTTAAGAGCACT...ACATATGTGTGTATAGGGAAGAGAATCGAAGAAGGGGCCAGATATGATGGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTTCCTGAACTGCTTTTCTTTCCCTTTATGTATTCCTCCCTGCAATTAACTGGGTCCTGGGTCTTCTaGAAGAGAAGCAAGTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NFPELLFFPFMYSSLQLTGSWVF*KRSKCS Trigger: AGAGCACTTGCTTCTCTTGCAGAAGACCCAGGACCC...AGTTAATTGCAGGGAGGAATACATAAAGGGAAAGAAAAGCAGTTCAGGAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATGATCTTATGGGTGGTTaGAAGCCACCATGTGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: EITCTSKEVDVGRHFHFNDLMGG*KPPCGC Trigger: GCAACCACATGGTGGCTTGCAACCACCCATAAGATC...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTTCCTGAACTGCTTTTCTTTCCCTTTATGTATTCCTCCCTGCAATTAACTACCAAACCTGGGTCCTaGGTCTTCTGCAAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: NFPELLFFPFMYSSLQLTTKPGS*VFCKRS Trigger: GCTTCTCTTGCAGAAGACCCAGGACCCAGGTTTGGT...AGTTAATTGCAGGGAGGAATACATAAAGGGAAAGAAAAGCAGTTCAGGAAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATATTAGGAACCAAACCTaGGTCCTGGGTCTTCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: EITCTSKEVDVGRHFHFNIRNQT*VLGLLQ Trigger: TTGCAGAAGACCCAGGACCCAGGTTTGGTTCCTAAT...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAACTGTGCCATCATATCTaGCCCCTTCTTCGATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQLCHHI*PLLRFS Trigger: AGAGAATCGAAGAAGGGGCCAGATATGATGGCACAG...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATCTGTGCCATCATATCTaGCCCCTTCTTCGATTCTCT | + |
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Preference number: 2 (lower is better) Translates to: EITCTSKEVDVGRHFHFNLCHHI*PLLRFS Trigger: AGAGAATCGAAGAAGGGGCCAGATATGATGGCACAG...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAATTGCAAGCCACCATGTaGTTGCTGGGATTTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQLQATM*LLGFEL Trigger: GAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAA...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CAA 90 bp | CTATATGTATGCATGTGTACCAGAGGCTATAAGGTGTTGGATCCATaGGAACTGGAGTTACAGATGATTGAAAGCTACCATGTGGGTATT | + |
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Preference number: 2 (lower is better) Translates to: LYVCMCTRGYKVLDP*ELELQMIESYHVGI Trigger: AATACCCACATGGTAGCTTTCAATCATCTGTAACTCCAGTTCCAATGGATCCAACACCTTATAGCCTCTGGTACACATGCATACATATAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTTCCTGAACTGCTTTTCTTTCCCTTTATGTATTCCTCCCTGCAATTAACTCCATCTCACCAGCCCTaGCTTTTTCTCAGAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: NFPELLFFPFMYSSLQLTPSHQP*LFLRKV Trigger: AACCTTTCTGAGAAAAAGTCAGGGCTGGTGAGATGG...AGTTAATTGCAGGGAGGAATACATAAAGGGAAAGAAAAGCAGTTCAGGAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | AACTTTCCTGAACTGCTTTTCTTTCCCTTTATGTATTCCTCCCTGCAATTAACTTTGCAAGCCACCATGTaGTTGCTGGGATTTGAACTC | + |
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Preference number: 2 (lower is better) Translates to: NFPELLFFPFMYSSLQLTLQATM*LLGFEL Trigger: GAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAA...AGTTAATTGCAGGGAGGAATACATAAAGGGAAAGAAAAGCAGTTCAGGAAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR GCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATGTTTGCCTATATGTATaGATGTGTACCAGAGGCTAT | + |
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Preference number: 2 (lower is better) Translates to: EITCTSKEVDVGRHFHFNVCLYV*MCTRGY Trigger: ATAGCCTCTGGTACACATGCATACATATAGGCAAAC...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR-3UTR CCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATTTGAAAGCTACCATGTaGGTATTAGGAACCAAACCT | + |
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Preference number: 2 (lower is better) Translates to: EITCTSKEVDVGRHFHFNLKATM*VLGTKP Trigger: AGGTTTGGTTCCTAATACCCACATGGTAGCTTTCAA...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR CCA 72 bp | GCCACGGTCCGACTTAGCACGAAGTGTTGGAGCATGTaGCCAGCTGAGCAAACGGCCTTTTCTCCTTTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ATVRLSTKCWSM*PAEQTAFSPLG Trigger: ACCCAAAGGAGAAAAGGCCGTTTGCTCAGCTGGCCACATGCTCCAACACTTCGTGCTAAGTCGGACCGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221118.2 |
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| 3UTR GCA 72 bp | TGGCTGTCTTGGAACTCACCGAGACCCTCCTGCCTCTaGTTCCTCGTGAATCACCATATTTGGCTGCACACT | + |
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Preference number: 3 (lower is better) Translates to: WLSWNSPRPSCL*FLVNHHIWLHT Trigger: AGTGTGCAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTTCCAAGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR TCA 72 bp | GGAACTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTaGATCACCATATTTGGCTGCACACTTCTTTTTGTT | + |
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Preference number: 3 (lower is better) Translates to: GTHRDPPASASS*ITIFGCTLLFV Trigger: AACAAAAAGAAGTGTGCAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
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| 3UTR GCA 72 bp | ATGCACCAGAAGAGGGCATCAGATCTTATGGGTGGTTaGAAGCCACCATGTGGTTGCTGGGATTTGAACTCA | + |
|
Preference number: 3 (lower is better) Translates to: MHQKRASDLMGG*KPPCGCWDLNS Trigger: TGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCCCTCTTCTGGTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CCA 72 bp | GATCTTATGGGTGGTTGCAAGCCACCATGTGGTTGCTaGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: DLMGGCKPPCGC*DLNSGPLEEQS Trigger: TGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CCA 72 bp | GGCATCAGATCTTATGGGTGGTTGCAAGCCACCATGTaGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GIRSYGWLQATM*LLGFELRTFGR Trigger: TCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CCA 72 bp | ATCTTCAGATGCACCAGAAGAGGGCATCAGATCTTATaGGTGGTTGCAAGCCACCATGTGGTTGCTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: IFRCTRRGHQIL*VVASHHVVAGI Trigger: AATCCCAGCAACCACATGGTGGCTTGCAACCACCCATAAGATCTGATGCCCTCTTCTGGTGCATCTGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTTGGCTGCGGGAAATAAAGAGCTaGGAAAGCAAGCAGAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: NSPRPSCLCFLVNHHIWLREIKS*ESKQKY Trigger: GTATTTCTGCTTGCTTTCCAAGCTCTTTATTTCCCG...CAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTTAGCACGAAGTGTTGGAGCATGTGGCCAGCTGAGCAAACGGCCTTTTCTCAGATCTTTCTGGAACTaGACCATAGCTGCCATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: DLARSVGACGQLSKRPFLRSFWN*TIAAIL Trigger: CAAAATGGCAGCTATGGTCAAGTTCCAGAAAGATCT...GAGAAAAGGCCGTTTGCTCAGCTGGCCACATGCTCCAACACTTCGTGCTAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000221118.2 ENSMUST00000221350.2 |
||
| 3UTR CCA 72 bp | ATTGAAAGCTACCATGTGGGTATTAGGAACCAAACCTaGGTCCTGGGTCTTCTGCAAGAGAAGCAAGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: IESYHVGIRNQT*VLGLLQEKQVL Trigger: GAGCACTTGCTTCTCTTGCAGAAGACCCAGGACCCAGGTTTGGTTCCTAATACCCACATGGTAGCTTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CCA 72 bp | CTCAGGGCTAGGATTACAAGCCTGTGCCATCATATCTaGCCCCTTCTTCGATTCTCTTCCCTATACACACAT | + |
|
Preference number: 3 (lower is better) Translates to: LRARITSLCHHI*PLLRFSSLYTH Trigger: ATGTGTGTATAGGGAAGAGAATCGAAGAAGGGGCCAGATATGATGGCACAGGCTTGTAATCCTAGCCCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTATCCAAGGTGTTGGATCCATaGGAACTGGAGTTACAGATG | + |
|
Preference number: 3 (lower is better) Translates to: GCWDLNSGPLEEQSVLLSKVLDP*ELELQM Trigger: CATCTGTAACTCCAGTTCCAATGGATCCAACACCTT...GGATAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR TCA 72 bp | TTCTTTCCTGACTCACCCCCAACTCAGCCAAGCTTATaGGAGAGCACGGGAAATAAAGAGCTTGGAAAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FFPDSPPTQPSL*ESTGNKELGKQ Trigger: TTGCTTTCCAAGCTCTTTATTTCCCGTGCTCTCTCATAAGCTTGGCTGAGTTGGGGGTGAGTCAGGAAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR GCA 72 bp | CTCACTTGGGAGATAACCCCTGTGCAAGAAATTACCTaGACCTCCAAAGAAGTTGATGTAGGCAGGCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTWEITPVQEIT*TSKEVDVGRHF Trigger: AAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTCTTGCACAGGGGTTATCTCCCAAGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATCAAGCCACCATGTGGTaGCTGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: EITCTSKEVDVGRHFHFNQATMW*LGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTG...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAACAAGCCACCATGTGGTaGCTGGGATTTGAACTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQQATMW*LGFELR Trigger: CCTGAGTTCAAATCCCAGCAACCACATGGTGGCTTG...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATAGAGGCTATAAGGTGTaGGATCCATTGGAACTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EITCTSKEVDVGRHFHFNRGYKV*DPLELE Trigger: CTCCAGTTCCAATGGATCCAACACCTTATAGCCTCT...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR GCA 72 bp | ATTATTATAAGTAAGTACACTGTAGCTATCTTCAGATaGACCAGAAGAGGGCATCAGATCTTATGGGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: IIISKYTVAIFR*TRRGHQILWVV Trigger: AACCACCCATAAGATCTGATGCCCTCTTCTGGTGCATCTGAAGATAGCTACAGTGTACTTACTTATAATAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAACACAGACACATAAAGTaGTTCTGTGTTTATTTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQHRHIK*FCVYLP Trigger: TGGCAAATAAACACAGAACAACTTTATGTGTCTGTG...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR GCA 90 bp | GGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAGCAGTCAGTGCTCTTATCCAAGTGGGCCAGTGACTaGCCGCCACAGGCTCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCWDLNSGPLEEQSVLLSKWASD*PPQALK Trigger: CTTCAGAGCCTGTGGCGGGCAGTCACTGGCCCACTT...GGATAAGAGCACTGACTGCTCTTCCAAAGGTCCTGAGTTCAAATCCCAGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS-3UTR GCA 90 bp | ATGTGGCCAGCTGAGCAAACGGCCTTTTCTCCTTTGGGTCTGCAGTGGTACCGCAATATCCAGTCAGTTTaGAGAAAGGTCGGAGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: MWPAEQTAFSPLGLQWYRNIQSV*RKVGGR Trigger: GCGTCCTCCGACCTTTCTGCAAACTGACTGGATATT...GCGGTACCACTGCAGACCCAAAGGAGAAAAGGCCGTTTGCTCAGCTGGCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221350.2 |
||
| CDS-3UTR TCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATGCCCGCCACAGGCTCTaGAGGCTTCCCGAGAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EITCTSKEVDVGRHFHFNARHRL*RLPESR Trigger: CCTGCTCTCGGGAAGCCTTCAGAGCCTGTGGCGGGC...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS-3UTR TCA 90 bp | AACTCACCGAGACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTTGGCTGGAGTTTATGGGTTTGTaGTCCAACCTATTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NSPRPSCLCFLVNHHIWLEFMGL*SNLFLS Trigger: AGACAGGAATAGGTTGGATCACAAACCCATAAACTC...CAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGTCTCGGTGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CAA 72 bp | AGCCAAGCTTATGAGAGAGCACGGGAAATAAAGAGCTaGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SQAYERAREIKS*ESKQKYQNCRA Trigger: CGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTATTTCCCGTGCTCTCTCATAAGCTTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR TCA 90 bp | ATAAAGAGCTTGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCGGTGGTGGCGGAGTTTATGGGTTTGTaGTCCAACCTATTCCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSLESKQKYQNCRAVVAEFMGL*SNLFLS Trigger: AGACAGGAATAGGTTGGATCACAAACCCATAAACTC...CGCCACCACCGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR CCA 90 bp | ATTGAAAGCTACCATGTGGGTATTAGGAACCAAACCTGGGTCCTGGGTCTTCTGTCTCGGTGCACAAAGTaGATGTTGTTACCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IESYHVGIRNQTWVLGLLSRCTK*MLLPEE Trigger: CTCCTCTGGTAACAACATCCACTTTGTGCACCGAGA...CAGAAGACCCAGGACCCAGGTTTGGTTCCTAATACCCACATGGTAGCTTTCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220895.2 |
||
| CDS-3UTR TCA 90 bp | TCTTATCCACTGAGCCATCTCACCAGCCCTGACTTTTTCTCAGAAAGGTTCTCTATGAAGTTCACAGGCTaGACCCCCACAAGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SYPLSHLTSPDFFSERFSMKFTG*TPTSCK Trigger: TTTACAGCTTGTGGGGGTTCAGCCTGTGAACTTCAT...AGAGAACCTTTCTGAGAAAAAGTCAGGGCTGGTGAGATGGCTCAGTGGATAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR CCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATAGGTTGGACTTTATGTaGGGGCTCTGTCCAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EITCTSKEVDVGRHFHFNRLDFM*GLCPEE Trigger: CTCCTCTGGACAGAGCCCCCACATAAAGTCCAACCT...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS-3UTR CCA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAATTCCCGAGAGCAGGTTaGACTTTATGTGGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQFPRAG*TLCGGS Trigger: AGAGCCCCCACATAAAGTCCAACCTGCTCTCGGGAA...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| 3UTR CAA 72 bp | ACCCTCCTGCCTCTGCTTCCTCGTGAATCACCATATTaGGCTGCACACTTCTTTTTGTTATTTTTGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: TLLPLLPRESPY*AAHFFLLFLRH Trigger: GTGTCTCAAAAATAACAAAAAGAAGTGTGCAGCCAAATATGGTGATTCACGAGGAAGCAGAGGCAGGAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCCATCATATCTGGCCCCTTCTTCGATTCTCTTCCCTATACACACATATGTCTATTCCTGTCTCGGTaGACAAAGTGGATGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CAIISGPFFDSLPYTHICLFLSR*TKWMLL Trigger: TAACAACATCCACTTTGTGCACCGAGACAGGAATAG...ACATATGTGTGTATAGGGAAGAGAATCGAAGAAGGGGCCAGATATGATGGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CAA 72 bp | TGCATGTGTACCAGAGGCTATAAGGTGTTGGATCCATaGGAACTGGAGTTACAGATGATTGAAAGCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CMCTRGYKVLDP*ELELQMIESYH Trigger: ATGGTAGCTTTCAATCATCTGTAACTCCAGTTCCAATGGATCCAACACCTTATAGCCTCTGGTACACATGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR TCA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAAATGAAGTTCACAGGCTaGACCCCCACAAGCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQMKFTG*TPTSCK Trigger: TTTACAGCTTGTGGGGGTTCAGCCTGTGAACTTCAT...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR CCA 90 bp | AACTTTCCTGAACTGCTTTTCTTTCCCTTTATGTATTCCTCCCTGCAATTAACTTTGGAAATCAAAAAGTaGGCCAGTGACTGCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NFPELLFFPFMYSSLQLTLEIKK*ASDCPP Trigger: TGGCGGGCAGTCACTGGCCCACTTTTTGATTTCCAA...AGTTAATTGCAGGGAGGAATACATAAAGGGAAAGAAAAGCAGTTCAGGAAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS-3UTR CCA 90 bp | GAAATTACCTGCACCTCCAAAGAAGTTGATGTAGGCAGGCATTTTCACTTTAATTCTCGGTGCACAAAGTaGATGTTGTTACCTGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: EITCTSKEVDVGRHFHFNSRCTK*MLLPGP Trigger: AGGTCCAGGTAACAACATCCACTTTGTGCACCGAGA...ATTAAAGTGAAAATGCCTGCCTACATCAACTTCTTTGGAGGTGCAGGTAATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS-3UTR GCA 90 bp | AACTTTCCTGAACTGCTTTTCTTTCCCTTTATGTATTCCTCCCTGCAATTAACTCTATTCCTGTCTCGGTaGACAAAGTGGATGTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NFPELLFFPFMYSSLQLTLFLSR*TKWMLL Trigger: TAACAACATCCACTTTGTGCACCGAGACAGGAATAG...AGTTAATTGCAGGGAGGAATACATAAAGGGAAAGAAAAGCAGTTCAGGAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| 3UTR CAA 72 bp | TCACCATATTTGGCTGCACACTTCTTTTTGTTATTTTaGAGACACAATTTCACCATATATAGCCCAGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPYLAAHFFLLF*RHNFTIYSPDW Trigger: CCAGTCTGGGCTATATATGGTGAAATTGTGTCTCAAAAATAACAAAAAGAAGTGTGCAGCCAAATATGGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS GCA 90 bp | GACGCGTCCAGCACGGGCAGCTCCGCTACGGCGGCCGCTAGCGGCTaGCCGCGCTCTGTGACCGAGCCAGCCGGGCTCGGGACCCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: DASSTGSSATAAASG*PRSVTEPAGLGTRP Trigger: AGGCCGGGTCCCGAGCCCGGCTGGCTCGGTCACAGAGCGCGGGCAGCCGCTAGCGGCCGCCGTAGCGGAGCTGCCCGTGCTGGACGCGTC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS-3UTR CAA 90 bp | ATAAAGAGCTTGGAAAGCAAGCAGAAATACCAAAACTGCCGGGCGGTGGTGGCGTGCACAAAGTGGATGTaGTTACCTGGACCTAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: IKSLESKQKYQNCRAVVACTKWM*LPGPKM Trigger: CATTTTAGGTCCAGGTAACAACATCCACTTTGTGCA...CGCCACCACCGCCCGGCAGTTTTGGTATTTCTGCTTGCTTTCCAAGCTCTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACCAAGTAGTATTTCCTTCAACTTATTCCACCAAAACAAGCTTAGGGCAACTTCCCGAGAGCAGGTaGGACTTTATGTGGGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PNQVVFPSTYSTKTSLGQLPESR*DFMWGL Trigger: GAGCCCCCACATAAAGTCCAACCTGCTCTCGGGAAG...TTGCCCTAAGCTTGTTTTGGTGGAATAAGTTGAAGGAAATACTACTTGGTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222570.2 |
||
| CDS GCA 72 bp | CTCTGTGACCGAGCCAGCCGGGCTCGGGACCCGGCCTaGGCAGCCGCTGACCTGCCGCGTCACCGGCGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LCDRASRARDPA*AAADLPRHRRG Trigger: GCCGCGCCGGTGACGCGGCAGGTCAGCGGCTGCGCAGGCCGGGTCCCGAGCCCGGCTGGCTCGGTCACAGAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS GCA 72 bp | AGCACGGGCAGCTCCGCTACGGCGGCCGCTAGCGGCTaGCCGCGCTCTGTGACCGAGCCAGCCGGGCTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: STGSSATAAASG*PRSVTEPAGLG Trigger: CCCGAGCCCGGCTGGCTCGGTCACAGAGCGCGGGCAGCCGCTAGCGGCCGCCGTAGCGGAGCTGCCCGTGCT 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000220895.2 ENSMUST00000222570.2 |
||
| CDS TCA 72 bp | TCAAAAAGTGGGCCAGTGACTGCCCGCCACAGGCTCTaGAGGCTTCCCGAGAGCAGGTTGGACTTTATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SKSGPVTARHRL*RLPESRLDFMW Trigger: CCACATAAAGTCCAACCTGCTCTCGGGAAGCCTTCAGAGCCTGTGGCGGGCAGTCACTGGCCCACTTTTTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021938.11 ENSMUST00000222570.2 |
||
| CDS CAA 72 bp | ACTATGAGGGTGACATCTGCTTCTCGGAGGACGCTCTaGGGGATTTTGGCCAGATCTTCGACATATTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: TMRVTSASRRTL*GILARSSTYSL Trigger: TAAAGAATATGTCGAAGATCTGGCCAAAATCCCCAAGAGCGTCCTCCGAGAAGCAGATGTCACCCTCATAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000220895.2 ENSMUST00000221118.2 ENSMUST00000222570.2 |
||
| CDS CAA 72 bp | TATCCAGTCAGTTTGCAGAAAGGTCGGAGGACGCTCTaGGGGATTTTGGCCAGATCTTCGACATATTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: YPVSLQKGRRTL*GILARSSTYSL Trigger: TAAAGAATATGTCGAAGATCTGGCCAAAATCCCCAAGAGCGTCCTCCGACCTTTCTGCAAACTGACTGGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021938.11 ENSMUST00000221350.2 |
||