Pregenerated sensors for PRUNE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015711Ensembl transcript IDs: ENSMUST00000015855.8
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGACCCACTAAGACAGGGGATATCCAGGGCTCAGTCAGGTTCTaGCCTCTTGGCAAAAATGCCTCTGAGGTCCCATGGCCACCAGGA | + |
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Preference number: 1 (lower is better) Translates to: GRPTKTGDIQGSVRF*PLGKNASEVPWPPG Trigger: TCCTGGTGGCCATGGGACCTCAGAGGCATTTTTGCCAAGAGGGCAGAACCTGACTGAGCCCTGGATATCCCCTGTCTTAGTGGGTCTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 90 bp | GAGGTGGGGGAGGCGAGGGGAGACTACACATGCGGAACAAATTACTaGGAGAGAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATG | + |
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Preference number: 1 (lower is better) Translates to: EVGEARGDYTCGTNY*ERARCWVTITTLYM Trigger: CATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCCAGTAATTTGTTCCGCATGTGTAGTCTCCCCTCGCCTCCCCCACCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 90 bp | TGGCAGACGCTGCCTCTGTTCACAGTCCTTCTGAAGACACTGAGATaGGGTCTACATTCCTTTAGTCCTGCTCTGCCAGGACAGTGGTCC | + |
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Preference number: 1 (lower is better) Translates to: WQTLPLFTVLLKTLR*GLHSFSPALPGQWS Trigger: GGACCACTGTCCTGGCAGAGCAGGACTAAAGGAATGTAGACCCCATCTCAGTGTCTTCAGAAGGACTGTGAACAGAGGCAGCGTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR TCA 90 bp | ACTGACGTAGTTGCTGAAGTGGTCAAACATCTCAAAACATGCATTTaGGGCAGGCCAGTCACCTCCTCCACACTTCCCCACCCTACTTCC | + |
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Preference number: 1 (lower is better) Translates to: TDVVAEVVKHLKTCI*GRPVTSSTLPHPTS Trigger: GGAAGTAGGGTGGGGAAGTGTGGAGGAGGTGACTGGCCTGCCTCAAATGCATGTTTTGAGATGTTTGACCACTTCAGCAACTACGTCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR GCA 90 bp | AGGGGAGACTACACATGCGGAACAAATTACTGGGAGAGAGCTCGCTaGTGGGTCACCATTACAACCCTGTACATGCTACATGAGGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: RGDYTCGTNYWERAR*WVTITTLYMLHEAK Trigger: CTTAGCCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCCAGTAATTTGTTCCGCATGTGTAGTCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 90 bp | GGAGACTACACATGCGGAACAAATTACTGGGAGAGAGCTCGCTGCTaGGTCACCATTACAACCCTGTACATGCTACATGAGGCTAAGTTC | + |
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Preference number: 1 (lower is better) Translates to: GDYTCGTNYWERARC*VTITTLYMLHEAKF Trigger: GAACTTAGCCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCCAGTAATTTGTTCCGCATGTGTAGTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR TCA 90 bp | CAAAACAAAGTACCAAAGTCACAGAACACAATCCCTTTGGTTCAGTaGTCGCACCAATATTTCACGTTCCCATTGGCTACAGACGTCATA | + |
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Preference number: 1 (lower is better) Translates to: QNKVPKSQNTIPLVQ*SHQYFTFPLATDVI Trigger: TATGACGTCTGTAGCCAATGGGAACGTGAAATATTGGTGCGATCACTGAACCAAAGGGATTGTGTTCTGTGACTTTGGTACTTTGTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 90 bp | CAAAAATGCAAAACAAAGTACCAAAGTCACAGAACACAATCCCTTTaGTTCAGTGATCGCACCAATATTTCACGTTCCCATTGGCTACAG | + |
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Preference number: 1 (lower is better) Translates to: QKCKTKYQSHRTQSL*FSDRTNISRSHWLQ Trigger: CTGTAGCCAATGGGAACGTGAAATATTGGTGCGATCACTGAACCAAAGGGATTGTGTTCTGTGACTTTGGTACTTTGTTTTGCATTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAGAGAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATGCTACATGAGGGCCTCTGAGGTCCCATaGCCACCAGGAGAAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: GRELAAGSPLQPCTCYMRASEVP*PPGESK Trigger: CTTGCTTTCTCCTGGTGGCCATGGGACCTCAGAGGC...CCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CAA 90 bp | CCACTAAGACAGGGGATATCCAGGGCTCAGTCAGGTTCTGCCCTCTaGGCAAAAATGCCTCTGAGGTCCCATGGCCACCAGGAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: PLRQGISRAQSGSAL*AKMPLRSHGHQEKA Trigger: TGCTTTCTCCTGGTGGCCATGGGACCTCAGAGGCATTTTTGCCAAGAGGGCAGAACCTGACTGAGCCCTGGATATCCCCTGTCTTAGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAGAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATGCTACATGAGGGGCTCAGTCAGGTTCTaGCCTCTTGGCAAAAATGCC | + |
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Preference number: 2 (lower is better) Translates to: GRELAAGSPLQPCTCYMRGSVRF*PLGKNA Trigger: GGCATTTTTGCCAAGAGGGCAGAACCTGACTGAGCC...CCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGCGCGAACGCTCCCAGGGAGGACAAAAGTAATGAGGAAGCAGAGGGGAGAAGGTGAACTGGTTTCATaGCAGACGCTGCCTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: RARTLPGRTKVMRKQRGEGELVS*QTLPLF Trigger: GAACAGAGGCAGCGTCTGCCATGAAACCAGTTCACC...TTCTCCCCTCTGCTTCCTCATTACTTTTGTCCTCCCTGGGAGCGTTCGCGCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGCGCGAACGCTCCCAGGGAGGACAAAAGTAATGAGGAAGCAGAGGGGAGAACCAGCCTGGGCTACATaGGGCTCTGTCTCAAAAATA | + |
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Preference number: 2 (lower is better) Translates to: RARTLPGRTKVMRKQRGEPAWAT*GSVSKI Trigger: TATTTTTGAGACAGAGCCTCATGTAGCCCAGGCTGG...TTCTCCCCTCTGCTTCCTCATTACTTTTGTCCTCCCTGGGAGCGTTCGCGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAGAGAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATGCTACATGAGGGGCTTCCCATCATTCTaGGACAGAAGGAGCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GRELAAGSPLQPCTCYMRGFPSF*DRRSQR Trigger: TCTTTGGCTCCTTCTGTCTCAGAATGATGGGAAGCC...CCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR TCA 90 bp | CAGACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTCTCCTCCCAAGGTTATaGGAACAGTACACCCGATCC | + |
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Preference number: 2 (lower is better) Translates to: QTAPNHHTPYCSAILFATLLPRL*EQYTRS Trigger: GGATCGGGTGTACTGTTCTCATAACCTTGGGAGGAG...AGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR GCA 90 bp | AGAGCGCGAACGCTCCCAGGGAGGACAAAAGTAATGAGGAAGCAGAGGGGAGAACCAGGTTTAATGCAGTaGTTGACAATCTCAGCACTC | + |
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Preference number: 2 (lower is better) Translates to: RARTLPGRTKVMRKQRGEPGLMQ*LTISAL Trigger: GAGTGCTGAGATTGTCAAGCACTGCATTAAACCTGG...TTCTCCCCTCTGCTTCCTCATTACTTTTGTCCTCCCTGGGAGCGTTCGCGCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTTATTTACAGGTGGGGAAATaGGACCCGGGACAGAGGATG | + |
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Preference number: 2 (lower is better) Translates to: TAPNHHTPYCSAILFATYLQVGK*DPGQRM Trigger: CATCCTCTGTCCCGGGTCCCATTTCCCCACCTGTAA...ATAAGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CAA 90 bp | GGACAGAGGATGTCTCACCAGAAGACTCTCCACGCATTCTTCAACTaGAGCAAAACCAGAAAAAGACTGACAAGACCTTGGCAGACCCAC | + |
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Preference number: 2 (lower is better) Translates to: GQRMSHQKTLHAFFN*SKTRKRLTRPWQTH Trigger: GTGGGTCTGCCAAGGTCTTGTCAGTCTTTTTCTGGTTTTGCTCAAGTTGAAGAATGCGTGGAGAGTCTTCTGGTGAGACATCCTCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTTATCTCAAAACATGCATTTaGGGCAGGCCAGTCACCTCC | + |
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Preference number: 2 (lower is better) Translates to: TAPNHHTPYCSAILFATYLKTCI*GRPVTS Trigger: GGAGGTGACTGGCCTGCCTCAAATGCATGTTTTGAG...ATAAGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGATGTCTCACCAGAAGACTCTCCACGCATTCTTCAACTTGAGCAAAACCAGCTGAAGACACTGAGATaGGGTCTACATTCCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: EDVSPEDSPRILQLEQNQLKTLR*GLHSFS Trigger: ACTAAAGGAATGTAGACCCCATCTCAGTGTCTTCAG...CTGGTTTTGCTCAAGTTGAAGAATGCGTGGAGAGTCTTCTGGTGAGACATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR TCA 72 bp | CTCAGTCAGGTTCTGCCCTCTTGGCAAAAATGCCTCTaGGGTCCCATGGCCACCAGGAGAAAGCAAGGACCT | + |
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Preference number: 3 (lower is better) Translates to: LSQVLPSWQKCL*GPMATRRKQGP Trigger: AGGTCCTTGCTTTCTCCTGGTGGCCATGGGACCTCAGAGGCATTTTTGCCAAGAGGGCAGAACCTGACTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR GCA 72 bp | ACTAAGACAGGGGATATCCAGGGCTCAGTCAGGTTCTaGCCTCTTGGCAAAAATGCCTCTGAGGTCCCATGG | + |
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Preference number: 3 (lower is better) Translates to: TKTGDIQGSVRF*PLGKNASEVPW Trigger: CCATGGGACCTCAGAGGCATTTTTGCCAAGAGGGCAGAACCTGACTGAGCCCTGGATATCCCCTGTCTTAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 72 bp | GGTCAATTCATGGAGAGGAGCGGTGAACTGGTTTCATaGCAGACGCTGCCTCTGTTCACAGTCCTTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: GQFMERSGELVS*QTLPLFTVLLK Trigger: CTTCAGAAGGACTGTGAACAGAGGCAGCGTCTGCCATGAAACCAGTTCACCGCTCCTCTCCATGAATTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 72 bp | CTGCCTCTGTTCACAGTCCTTCTGAAGACACTGAGATaGGGTCTACATTCCTTTAGTCCTGCTCTGCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: LPLFTVLLKTLR*GLHSFSPALPG Trigger: TCCTGGCAGAGCAGGACTAAAGGAATGTAGACCCCATCTCAGTGTCTTCAGAAGGACTGTGAACAGAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR GCA 72 bp | GAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATaGTACATGAGGCTAAGTTCCTTGGTACAATCACAC | + |
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Preference number: 3 (lower is better) Translates to: ELAAGSPLQPCT*YMRLSSLVQSH Trigger: GTGTGATTGTACCAAGGAACTTAGCCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 72 bp | GGTCTACATTCCTTTAGTCCTGCTCTGCCAGGACAGTaGTCCTATCACACTGTACCCACCAAAGACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: GLHSFSPALPGQ*SYHTVPTKDRK Trigger: TTTCCTGTCTTTGGTGGGTACAGTGTGATAGGACCACTGTCCTGGCAGAGCAGGACTAAAGGAATGTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 72 bp | ACATGCGGAACAAATTACTGGGAGAGAGCTCGCTGCTaGGTCACCATTACAACCCTGTACATGCTACATGAG | + |
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Preference number: 3 (lower is better) Translates to: TCGTNYWERARC*VTITTLYMLHE Trigger: CTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCCAGTAATTTGTTCCGCATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR-3UTR CAA 90 bp | AACCAGAAAAAGACTGACAAGACCTTGGCAGACCCACTAAGACAGGGGATATCCTCTCAAAACATGCATTaGAGGCAGGCCAGTCACCTC | + |
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Preference number: 3 (lower is better) Translates to: NQKKTDKTLADPLRQGISSQNMH*RQASHL Trigger: GAGGTGACTGGCCTGCCTCAAATGCATGTTTTGAGA...GGATATCCCCTGTCTTAGTGGGTCTGCCAAGGTCTTGTCAGTCTTTTTCTGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR GCA 72 bp | TACACATGCGGAACAAATTACTGGGAGAGAGCTCGCTaGTGGGTCACCATTACAACCCTGTACATGCTACAT | + |
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Preference number: 3 (lower is better) Translates to: YTCGTNYWERAR*WVTITTLYMLH Trigger: ATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCCAGTAATTTGTTCCGCATGTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR TCA 72 bp | GTACCAAAGTCACAGAACACAATCCCTTTGGTTCAGTaGTCGCACCAATATTTCACGTTCCCATTGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: VPKSQNTIPLVQ*SHQYFTFPLAT Trigger: TGTAGCCAATGGGAACGTGAAATATTGGTGCGATCACTGAACCAAAGGGATTGTGTTCTGTGACTTTGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 72 bp | TGGTTCAGTGATCGCACCAATATTTCACGTTCCCATTaGCTACAGACGTCATACACTAAAGTGAAGTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: WFSDRTNISRSH*LQTSYTKVKSD Trigger: GTCTGACTTCACTTTAGTGTATGACGTCTGTAGCCAATGGGAACGTGAAATATTGGTGCGATCACTGAACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CCA 72 bp | AAAACAAAGTACCAAAGTCACAGAACACAATCCCTTTaGTTCAGTGATCGCACCAATATTTCACGTTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: KTKYQSHRTQSL*FSDRTNISRSH Trigger: ATGGGAACGTGAAATATTGGTGCGATCACTGAACCAAAGGGATTGTGTTCTGTGACTTTGGTACTTTGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | TCCCATGGCCACCAGGAGAAAGCAAGGACCTCAATCCTCAGGTCCCCGTCAGGCGCGGAGAGGGCTTCCTaGAGCACAGGCAGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SHGHQEKARTSILRSPSGAERAS*STGSSF Trigger: GAAGCTGCTGCCTGTGCTCCAGGAAGCCCTCTCCGC...GCCTGACGGGGACCTGAGGATTGAGGTCCTTGCTTTCTCCTGGTGGCCATGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | GGAGAGGCAGAGAGCTGTCCCTACAGCAGCCGCTCTCTTTCTCTTTCTCCTCCCTCTCTGTCACCAGGGTaGCACAGGACCCCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GEAESCPYSSRSLSLSPPSLSPG*HRTPPA Trigger: AGCTGGTGGGGTCCTGTGCCACCCTGGTGACAGAGA...GGGAGGAGAAAGAGAAAGAGAGCGGCTGCTGTAGGGACAGCTCTCTGCCTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | CCACCAGGAGAAAGCAAGGACCTCAATCCTCAGGTCCCCGTCAGGCTTCCCATCGTTCATAGGCGTGGGTaGCAGCGGAGGGTCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: PPGESKDLNPQVPVRLPIVHRRG*QRRVFL Trigger: GAGGAAGACCCTCCGCTGCCACCCACGCCTATGAAC...GATGGGAAGCCTGACGGGGACCTGAGGATTGAGGTCCTTGCTTTCTCCTGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | GTGACCCAGAGCGCGAACGCTCCCAGGGAGGACAAAAGTAATGAGGAAGCAGAGTCAGGGGTGGGGAGGTaGATCGTTCCAGGATGCCAC | + |
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Preference number: 4 (lower is better) Translates to: VTQSANAPREDKSNEEAESGVGR*IVPGCH Trigger: GTGGCATCCTGGAACGATCCACCTCCCCACCCCTGA...CTCTGCTTCCTCATTACTTTTGTCCTCCCTGGGAGCGTTCGCGCTCTGGGTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | ATGGGAGGTGGGGGAGGCGAGGGGAGACTACACATGCGGAACAAATTACTGGGAGTCTCTGGTGCCCCCTaGAGGATTCTCTCTGTCACC | + |
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Preference number: 4 (lower is better) Translates to: MGGGGGEGRLHMRNKLLGVSGAP*RILSVT Trigger: GGTGACAGAGAGAATCCTGCAGGGGGCACCAGAGAC...TCCCAGTAATTTGTTCCGCATGTGTAGTCTCCCCTCGCCTCCCCCACCTCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CAA 72 bp | CAGGGGATATCCAGGGCTCAGTCAGGTTCTGCCCTCTaGGCAAAAATGCCTCTGAGGTCCCATGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: QGISRAQSGSAL*AKMPLRSHGHQ Trigger: CTGGTGGCCATGGGACCTCAGAGGCATTTTTGCCAAGAGGGCAGAACCTGACTGAGCCCTGGATATCCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | CCACCAGGAGAAAGCAAGGACCTCAATCCTCAGGTCCCCGTCAGGCTTCCCATCGATCAGGGCTGGCTCTaGAATCTTAACCTCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: PPGESKDLNPQVPVRLPIDQGWL*NLNLLE Trigger: CTCCAGGAGGTTAAGATTCCAGAGCCAGCCCTGATC...GATGGGAAGCCTGACGGGGACCTGAGGATTGAGGTCCTTGCTTTCTCCTGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | TCTCTTTCTCCTCCCAAGGTTATGAGAACAGTACACCCGATCCTGAAGCCACTGAGCTGGCCAGCCTGGTaGAGGGCTAGGAGGTCAATC | + |
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Preference number: 4 (lower is better) Translates to: SLSPPKVMRTVHPILKPLSWPAW*RARRSI Trigger: GATTGACCTCCTAGCCCTGCACCAGGCTGGCCAGCT...CAGTGGCTTCAGGATCGGGTGTACTGTTCTCATAACCTTGGGAGGAGAAAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | CCTTTAGTCCTGCTCTGCCAGGACAGTGGTCCTATCACACTGTACCCACCAAAGTCTGTCCAAGGTCTCTaGTGCCCCCTGCAGGATTCT | + |
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Preference number: 4 (lower is better) Translates to: PLVLLCQDSGPITLYPPKSVQGL*CPLQDS Trigger: AGAATCCTGCAGGGGGCACCAGAGACCTTGGACAGA...CTTTGGTGGGTACAGTGTGATAGGACCACTGTCCTGGCAGAGCAGGACTAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGAGGAGCGGTGAACTGGTTTCATGGCAGACGCTGCCTCTGTTCACAGTCGTTAGGGGAGGTGCTTaGGATAGGTGTCAGCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: MERSGELVSWQTLPLFTVVRGGA*DRCQLQ Trigger: CTGAAGCTGACACCTATCCCAAGCACCTCCCCTAAC...GACTGTGAACAGAGGCAGCGTCTGCCATGAAACCAGTTCACCGCTCCTCTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR TCA 90 bp | CTACAGACGTCATACACTAAAGTGAAGTCAGACTGCCCCAAACCACCACACACCCCCCACCAGCTCAACTaGAACGTGACAGGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: LQTSYTKVKSDCPKPPHTPHQLN*NVTGRT Trigger: TGTCCTCCCTGTCACGTTTCAGTTGAGCTGGTGGGG...GGTGTGTGGTGGTTTGGGGCAGTCTGACTTCACTTTAGTGTATGACGTCTGTAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR TCA 90 bp | ATCTCAAAACATGCATTTGAGGCAGGCCAGTCACCTCCTCCACACTTCCCCACCGGGTCTTCCTCATCTTaGCTCAGCCCAGAAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: ISKHAFEAGQSPPPHFPTGSSSS*LSPEIR Trigger: CCTGATTTCTGGGCTGAGTCAAGATGAGGAAGACCC...GGTGGGGAAGTGTGGAGGAGGTGACTGGCCTGCCTCAAATGCATGTTTTGAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | GGGAGAGAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATGCTACATGAGGGTAGATTGCACTGATTaGCACCTTGGTGCCCTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GRELAAGSPLQPCTCYMRVDCTD*HLGALS Trigger: AGACAGGGCACCAAGGTGGCAATCAGTGCAATCTAC...CCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | GAAGTCAAGACAAGAGACCAGCCAGGTTTAATGCAGTGCTTGACAATCTCAGCAGTGAGCTGGCCAGCCTaGTGCAGGGCTAGGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EVKTRDQPGLMQCLTISAVSWPA*CRARRS Trigger: TGACCTCCTAGCCCTGCACCAGGCTGGCCAGCTCAC...TGCTGAGATTGTCAAGCACTGCATTAAACCTGGCTGGTCTCTTGTCTTGACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR TCA 90 bp | ATGGAGAGGAGCGGTGAACTGGTTTCATGGCAGACGCTGCCTCTGTTCACAGTCAGCTCAACTGAAACGTaGCAGGGAGGACAGTATTTC | + |
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Preference number: 4 (lower is better) Translates to: MERSGELVSWQTLPLFTVSSTET*QGGQYF Trigger: GAAATACTGTCCTCCCTGTCACGTTTCAGTTGAGCT...GACTGTGAACAGAGGCAGCGTCTGCCATGAAACCAGTTCACCGCTCCTCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | TCTCTTTCTCCTCCCAAGGTTATGAGAACAGTACACCCGATCCTGAAGCCACTGGAGAGACCTGGGTGTTaGCTTGGTGATAGGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: SLSPPKVMRTVHPILKPLERPGC*LGDRPG Trigger: TCCAGGCCTATCACCAAGGCAACACCCAGGTCTCTC...CAGTGGCTTCAGGATCGGGTGTACTGTTCTCATAACCTTGGGAGGAGAAAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | GGAGAGGCAGAGAGCTGTCCCTACAGCAGCCGCTCTCTTTCTCTTTCTCCTCCCATAGTGAGATCTGACTaGACTTCTCAAAGACAGCCT | + |
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Preference number: 4 (lower is better) Translates to: GEAESCPYSSRSLSLSPPIVRSD*TSQRQP Trigger: AGGCTGTCTTTGAGAAGTGCAGTCAGATCTCACTAT...GGGAGGAGAAAGAGAAAGAGAGCGGCTGCTGTAGGGACAGCTCTCTGCCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | CAGACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTTGCTCAATTGGTCGGTaGTCCAGCACCTCTGCTACG | + |
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Preference number: 4 (lower is better) Translates to: QTAPNHHTPYCSAILFATCSIGR*SSTSAT Trigger: CGTAGCAGAGGTGCTGGACCACCGACCAATTGAGCA...AGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | ATCTCAAAACATGCATTTGAGGCAGGCCAGTCACCTCCTCCACACTTCCCCACCTTGATGTGCAGGCTCTaGCAGACTGGGATAGTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ISKHAFEAGQSPPPHFPTLMCRL*QTGIVR Trigger: TCTCACTATCCCAGTCTGCCAGAGCCTGCACATCAA...GGTGGGGAAGTGTGGAGGAGGTGACTGGCCTGCCTCAAATGCATGTTTTGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | ACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTTATAGAGGCCTGGAATCCTaGAAAGCGGCTCGACAGTCC | + |
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Preference number: 4 (lower is better) Translates to: TAPNHHTPYCSAILFATYRGLES*KAARQS Trigger: GGACTGTCGAGCCGCTTTGCAGGATTCCAGGCCTCT...ATAAGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | GTGACCCAGAGCGCGAACGCTCCCAGGGAGGACAAAAGTAATGAGGAAGCAGAGTCAAACTTGGCCTTCTaGAGGGAATCAAATATGTCC | + |
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Preference number: 4 (lower is better) Translates to: VTQSANAPREDKSNEEAESNLAF*RESNMS Trigger: GGACATATTTGATTCCCTGCAGAAGGCCAAGTTTGA...CTCTGCTTCCTCATTACTTTTGTCCTCCCTGGGAGCGTTCGCGCTCTGGGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | GCTCTGCCAGGACAGTGGTCCTATCACACTGTACCCACCAAAGACAGGAAAATCAAGTCCTTGTCCACCTaGTCCCTAGACATACCCACA | + |
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Preference number: 4 (lower is better) Translates to: ALPGQWSYHTVPTKDRKIKSLST*SLDIPT Trigger: TGTGGGTATGTCTAGGGAGCAGGTGGACAAGGACTT...GATTTTCCTGTCTTTGGTGGGTACAGTGTGATAGGACCACTGTCCTGGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | CCACCAGGAGAAAGCAAGGACCTCAATCCTCAGGTCCCCGTCAGGCTTCCCATCCTTTTGGGTAAAATATaGTGGTCAACAAGGATGAGG | + |
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Preference number: 4 (lower is better) Translates to: PPGESKDLNPQVPVRLPILLGKI*WSTRMR Trigger: CCTCATCCTTGTTGACCACCATATTTTACCCAAAAG...GATGGGAAGCCTGACGGGGACCTGAGGATTGAGGTCCTTGCTTTCTCCTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | CAATTCATGGAGAGGAGCGGTGAACTGGTTTCATGGCAGACGCTGCCTCTGTTCCAAGTCCATGTAGATTaGACTGATTGCCACCTTGGT | + |
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Preference number: 4 (lower is better) Translates to: QFMERSGELVSWQTLPLFQVHVD*TDCHLG Trigger: ACCAAGGTGGCAATCAGTGCAATCTACATGGACTTG...GAACAGAGGCAGCGTCTGCCATGAAACCAGTTCACCGCTCCTCTCCATGAATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | ATGGAGAGGAGCGGTGAACTGGTTTCATGGCAGACGCTGCCTCTGTTCACAGTCGGAATCTTAACCTCCTaGAGAAAGAAGACATTGTCC | + |
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Preference number: 4 (lower is better) Translates to: MERSGELVSWQTLPLFTVGILTS*RKKTLS Trigger: GGACAATGTCTTCTTTCTCCAGGAGGTTAAGATTCC...GACTGTGAACAGAGGCAGCGTCTGCCATGAAACCAGTTCACCGCTCCTCTCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | AGAGCGCGAACGCTCCCAGGGAGGACAAAAGTAATGAGGAAGCAGAGGGGAGAAATATGTCCTTTCTTTTaGGCAGATCTGGGAAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RARTLPGRTKVMRKQRGEICPFF*ADLGKG Trigger: CCCTTTTCCCAGATCTGCCCAAAAGAAAGGACATAT...TTCTCCCCTCTGCTTCCTCATTACTTTTGTCCTCCCTGGGAGCGTTCGCGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR TCA 90 bp | CAGACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTTCTTCTGGTCCTTTCTaGGCATCTGTTCAGTGGTCA | + |
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Preference number: 4 (lower is better) Translates to: QTAPNHHTPYCSAILFATSSGPF*ASVQWS Trigger: TGACCACTGAACAGATGCTCAGAAAGGACCAGAAGA...AGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR GCA 90 bp | TCTCTTTCTCCTCCCAAGGTTATGAGAACAGTACACCCGATCCTGAAGCCACTGAGGATGATGGTTCCATaGAGTAGGGCTGCAGTTTGT | + |
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Preference number: 4 (lower is better) Translates to: SLSPPKVMRTVHPILKPLRMMVP*SRAAVC Trigger: ACAAACTGCAGCCCTACTGCATGGAACCATCATCCT...CAGTGGCTTCAGGATCGGGTGTACTGTTCTCATAACCTTGGGAGGAGAAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | GAGGATGTCTCACCAGAAGACTCTCCACGCATTCTTCAACTTGAGCAAAACCAGTCTTTTGGGCAGATCTaGGAAAAGGGCTTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: EDVSPEDSPRILQLEQNQSFGQI*EKGFQF Trigger: GAACTGGAAGCCCTTTTCCCAGATCTGCCCAAAAGA...CTGGTTTTGCTCAAGTTGAAGAATGCGTGGAGAGTCTTCTGGTGAGACATCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CCA 90 bp | GAGGATGTCTCACCAGAAGACTCTCCACGCATTCTTCAACTTGAGCAAAACCAGTTGGGTAAAATATGGTaGTCAACAAGGATGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: EDVSPEDSPRILQLEQNQLGKIW*STRMRV Trigger: CACCCTCATCCTTGTTGACCACCATATTTTACCCAA...CTGGTTTTGCTCAAGTTGAAGAATGCGTGGAGAGTCTTCTGGTGAGACATCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| 3UTR CAA 72 bp | ATGTCTCACCAGAAGACTCTCCACGCATTCTTCAACTaGAGCAAAACCAGAAAAAGACTGACAAGACCTTGG | + |
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Preference number: 4 (lower is better) Translates to: MSHQKTLHAFFN*SKTRKRLTRPW Trigger: CCAAGGTCTTGTCAGTCTTTTTCTGGTTTTGCTCAAGTTGAAGAATGCGTGGAGAGTCTTCTGGTGAGACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS GCA 90 bp | TGCAGTAGGGCTGCAGTTTGTCTGTCCAAGGTCTCTGGTGCCCCCTaGAGGATTCTCTCTGTCACCAGGGTGGCACAGGACCCCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: CSRAAVCLSKVSGAP*RILSVTRVAQDPTS Trigger: GCTGGTGGGGTCCTGTGCCACCCTGGTGACAGAGAGAATCCTGCAGGGGGCACCAGAGACCTTGGACAGACAAACTGCAGCCCTACTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS TCA 90 bp | TCTGTCACCAGGGTGGCACAGGACCCCACCAGCTCAACTGAAACGTaGCAGGGAGGACAGTATTTCTGCTCAATTGGTCGGTGGTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: SVTRVAQDPTSSTET*QGGQYFCSIGRWSS Trigger: GCTGGACCACCGACCAATTGAGCAGAAATACTGTCCTCCCTGTCACGTTTCAGTTGAGCTGGTGGGGTCCTGTGCCACCCTGGTGACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CAA 90 bp | ATGGGAGGTGGGGGAGGCGAGGGGAGACTACACATGCGGAACAAATTACTGGGATGGAGAAAGAAGACATaGTCCCCGCGCAGAGGAAGC | + |
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Preference number: 5 (lower is better) Translates to: MGGGGGEGRLHMRNKLLGWRKKT*SPRRGS Trigger: GCTTCCTCTGCGCGGGGACAATGTCTTCTTTCTCCA...TCCCAGTAATTTGTTCCGCATGTGTAGTCTCCCCTCGCCTCCCCCACCTCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS CCA 90 bp | ATCTCGTCCCGGAAGATCAGGGCTGGCTCTGGAATCTTAACCTCCTaGAGAAAGAAGACATTGTCCCCGCGCAGAGGAAGCTCAGAACGC | + |
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Preference number: 5 (lower is better) Translates to: ISSRKIRAGSGILTS*RKKTLSPRRGSSER Trigger: GCGTTCTGAGCTTCCTCTGCGCGGGGACAATGTCTTCTTTCTCCAGGAGGTTAAGATTCCAGAGCCAGCCCTGATCTTCCGGGACGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS TCA 90 bp | GATTCTCTCTGTCACCAGGGTGGCACAGGACCCCACCAGCTCAACTaGAACGTGACAGGGAGGACAGTATTTCTGCTCAATTGGTCGGTG | + |
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Preference number: 5 (lower is better) Translates to: DSLCHQGGTGPHQLN*NVTGRTVFLLNWSV Trigger: CACCGACCAATTGAGCAGAAATACTGTCCTCCCTGTCACGTTTCAGTTGAGCTGGTGGGGTCCTGTGCCACCCTGGTGACAGAGAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CAA 90 bp | GGGAGAGAGCTCGCTGCTGGGTCACCATTACAACCCTGTACATGCTACATGAGGTGCTGTCCTTTGGGGTaGCCTTCCCAATGTTGGTAT | + |
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Preference number: 5 (lower is better) Translates to: GRELAAGSPLQPCTCYMRCCPLG*PSQCWY Trigger: ATACCAACATTGGGAAGGCAACCCCAAAGGACAGCA...CCTCATGTAGCATGTACAGGGTTGTAATGGTGACCCAGCAGCGAGCTCTCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CAA 90 bp | CCACCAGGAGAAAGCAAGGACCTCAATCCTCAGGTCCCCGTCAGGCTTCCCATCAATATGTCCTTTCTTTaGGGCAGATCTGGGAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: PPGESKDLNPQVPVRLPINMSFL*GRSGKR Trigger: CCTTTTCCCAGATCTGCCCAAAAGAAAGGACATATT...GATGGGAAGCCTGACGGGGACCTGAGGATTGAGGTCCTTGCTTTCTCCTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CAA 90 bp | GAGGATGTCTCACCAGAAGACTCTCCACGCATTCTTCAACTTGAGCAAAACCAGAGGGTCTTCCTCATCTaGACTCAGCCCAGAAATCAG | + |
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Preference number: 5 (lower is better) Translates to: EDVSPEDSPRILQLEQNQRVFLI*TQPRNQ Trigger: CTGATTTCTGGGCTGAGTCAAGATGAGGAAGACCCT...CTGGTTTTGCTCAAGTTGAAGAATGCGTGGAGAGTCTTCTGGTGAGACATCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS-3UTR CAA 90 bp | ACTGCCCCAAACCACCACACACCCTACTGTTCAGCGATATTGTTTGCAACTTATATGTTGGTATCCATGTaGACACAGTCCAGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: TAPNHHTPYCSAILFATYMLVSM*TQSRMM Trigger: CATCATCCTGGACTGTGTCAACATGGATACCAACAT...ATAAGTTGCAAACAATATCGCTGAACAGTAGGGTGTGTGGTGGTTTGGGGCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS GCA 72 bp | GCTGCAGTTTGTCTGTCCAAGGTCTCTGGTGCCCCCTaGAGGATTCTCTCTGTCACCAGGGTGGCACAGGAC | + |
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Preference number: 6 (lower is better) Translates to: AAVCLSKVSGAP*RILSVTRVAQD Trigger: GTCCTGTGCCACCCTGGTGACAGAGAGAATCCTGCAGGGGGCACCAGAGACCTTGGACAGACAAACTGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS CAA 90 bp | CCAGCTCAACTGAAACGTGACAGGGAGGACAGTATTTCTGCTCAATaGGTCGGTGGTCCAGCACCTCTGCTACGGCCTCCTCCAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PAQLKRDREDSISAQ*VGGPAPLLRPPPEL Trigger: CAGCTCTGGAGGAGGCCGTAGCAGAGGTGCTGGACCACCGACCAATTGAGCAGAAATACTGTCCTCCCTGTCACGTTTCAGTTGAGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS CCA 72 bp | ATCTTCGCTGAGTCAAGATATGCGGAGAGGGCTTCCTaGAGCACAGGCAGCAGCTTCTTCCGAGAGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: IFAESRYAERAS*STGSSFFRETW Trigger: CCAGGTCTCTCGGAAGAAGCTGCTGCCTGTGCTCCAGGAAGCCCTCTCCGCATATCTTGACTCAGCGAAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS TCA 72 bp | AGGGTGGCACAGGACCCCACCAGCTCAACTGAAACGTaGCAGGGAGGACAGTATTTCTGCTCAATTGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: RVAQDPTSSTET*QGGQYFCSIGR Trigger: CCGACCAATTGAGCAGAAATACTGTCCTCCCTGTCACGTTTCAGTTGAGCTGGTGGGGTCCTGTGCCACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS CCA 72 bp | GCCTCCTCCAGAGCTGCATCGCTTTTGGGTAAAATATaGTGGTCAACAAGGATGAGGGTGAGCTGGCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASSRAASLLGKI*WSTRMRVSWPA Trigger: GGCTGGCCAGCTCACCCTCATCCTTGTTGACCACCATATTTTACCCAAAAGCGATGCAGCTCTGGAGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS TCA 72 bp | TGTCACCAGGGTGGCACAGGACCCCACCAGCTCAACTaGAACGTGACAGGGAGGACAGTATTTCTGCTCAAT | + |
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Preference number: 6 (lower is better) Translates to: CHQGGTGPHQLN*NVTGRTVFLLN Trigger: ATTGAGCAGAAATACTGTCCTCCCTGTCACGTTTCAGTTGAGCTGGTGGGGTCCTGTGCCACCCTGGTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS GCA 72 bp | CAGAAAGGCCTTCAAGTCCATGTAGATTGCACTGATTaGCACCTTGGTGCCCTGTCTGTAGACTGTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QKGLQVHVDCTD*HLGALSVDCLL Trigger: CAGAAGACAGTCTACAGACAGGGCACCAAGGTGGCAATCAGTGCAATCTACATGGACTTGAAGGCCTTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS CAA 72 bp | GGCTCTGGAATCTTAACCTCCTGGAGAAAGAAGACATaGTCCCCGCGCAGAGGAAGCTCAGAACGCTTTATA | + |
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Preference number: 6 (lower is better) Translates to: GSGILTSWRKKT*SPRRGSSERFI Trigger: TATAAAGCGTTCTGAGCTTCCTCTGCGCGGGGACAATGTCTTCTTTCTCCAGGAGGTTAAGATTCCAGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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| CDS GCA 72 bp | GATCTGGGAAAAGGGCTTCCAGTTCTTCCACATATTTaGTGTCCTTTGGGGTTGCCTTCCCAATGTTGGTAT | + |
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Preference number: 6 (lower is better) Translates to: DLGKGLPVLPHI*CPLGLPSQCWY Trigger: ATACCAACATTGGGAAGGCAACCCCAAAGGACAGCAAATATGTGGAAGAACTGGAAGCCCTTTTCCCAGATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015855.8 |
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