Pregenerated sensors for PRTN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057729Ensembl transcript IDs: ENSMUST00000006679.15, ENSMUST00000166201.2
Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TATGTCTCAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTaGCTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAA | + |
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Preference number: 1 (lower is better) Translates to: YVSVFIEVIWNREQS*LHSRGCCVGGCVGE Trigger: TTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTGAGACATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| 3UTR-3UTR GCA 90 bp | AGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAAAGGTCTAGCCCCAGCTTTAGGCTaGCTGGAGCGCAGAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: RGCCVGGCVGERKAWKGLAPALG*LERRRA Trigger: TGCCCTTCTGCGCTCCAGGCAGCCTAAAGCTGGGGC...TAGACCTTTCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTGACTCCACTCCAGGGTGCTGCGTGGGTGGGTaGGTGGGTGAAAGAAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: QFLLRSYGIGNRADSTPGCCVGG*VGERKA Trigger: GGCTTTTCTTTCACCCACGCACCCACCCACGCAGCA...CCCTGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTGACTCCACTCCAGGTGAAAGAAAAGCCTaGAAAGGTCTAGTCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: SQFLLRSYGIGNRADSTPGERKA*KGLVHP Trigger: GGGGTGGACTAGACCTTTCCAGGCTTTTCTTTCACC...TGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | TCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAGCAGCACACGGGGCGTaGGTGCTTGGGTGCCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: STPGGAAWVGAWVKEKPGAAHGA*VLGCPG Trigger: GCCTGGGCACCCAAGCACCCACGCCCCGTGTGCTGC...TCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | CTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGCTTGGAGGCCTGGACTaGGCCACCAACCACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: LHSRGCCVGGCVGERKAWLGGLD*ATNHQG Trigger: GCCCTGGTGGTTGGTGGCGCAGTCCAGGCCTCCAAG...CCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | CCACTAGAGCCTGCTGGTCGCCCCAGCTTTAGGCTGCCTGGAGCGCAGAAGGGCAGGCACTGGGTGCCCTaGGACAGAGTCTGGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PLEPAGRPSFRLPGAQKGRHWVP*DRVWSC Trigger: GCAGGACCAGACTCTGTCCCAGGGCACCCAGTGCCT...GCCCTTCTGCGCTCCAGGCAGCCTAAAGCTGGGGCGACCAGCAGGCTCTAGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | CTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGGAGCTCAGCAGGTCGTaGGCACCCAGCACCACTGTC | + |
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Preference number: 4 (lower is better) Translates to: LHSRGCCVGGCVGERKAWELSRS*APSTTV Trigger: GACAGTGGTGCTGGGTGCCCACGACCTGCTGAGCTC...CCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | CTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAGAGTCTGGTCCTGCTaGGGCAGAGAAGCCACCGCC | + |
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Preference number: 4 (lower is better) Translates to: LHSRGCCVGGCVGERKAWRVWSC*GREATA Trigger: GGCGGTGGCTTCTCTGCCCCAGCAGGACCAGACTCT...CCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | TGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAAAGGTCTAGTCCACCGGGGCGTGGGTGCTTaGGTGCCCAGGCGACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: CCVGGCVGERKAWKGLVHRGVGA*VPRRPQ Trigger: CTGGGGTCGCCTGGGCACCCAAGCACCCACGCCCCG...GTGGACTAGACCTTTCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | CTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAGCAGCAGGAAGGGATaGATCCCCTTGGGGGATGGG | + |
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Preference number: 4 (lower is better) Translates to: LHSRGCCVGGCVGERKAWSSRKG*IPLGDG Trigger: CCCATCCCCCAAGGGGATCCATCCCTTCCTGCTGCT...CCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | CCACTAGAGCCTGCTGGTCGCCCCAGCTTTAGGCTGCCTGGAGCGCAGAAGGGCACCACTGTCACAAGCTaGCAGGAGATGTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PLEPAGRPSFRLPGAQKGTTVTS*QEMSCR Trigger: CCTGCAGGACATCTCCTGGCAGCTTGTGACAGTGGT...GCCCTTCTGCGCTCCAGGCAGCCTAAAGCTGGGGCGACCAGCAGGCTCTAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | GACTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGACAGAGTCTGGTCCTaGTGGGGCAGAGAAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: DSTPGGAAWVGAWVKEKPDRVWS*WGREAT Trigger: GGTGGCTTCTCTGCCCCAGCAGGACCAGACTCTGTC...AGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | TGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAAAGGTCTAGTCCACCCCATGGCCAGGCACTaGGTGCCCTGGGACAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: CCVGGCVGERKAWKGLVHPMARH*VPWDRV Trigger: GACTCTGTCCCAGGGCACCCAGTGCCTGGCCATGGG...GTGGACTAGACCTTTCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | TGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAAAGGTCTAGTCCACTGCCAGGAGATGTCCTaGAGGCAGTGGGCGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: CCVGGCVGERKAWKGLVHCQEMS*RQWAAV Trigger: GACAGCCGCCCACTGCCTGCAGGACATCTCCTGGCA...GTGGACTAGACCTTTCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | TCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGACATGAAGAATGCCATTaGAGATCAAGGGGCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: STPGGAAWVGAWVKEKPGHEECH*RSRGRP Trigger: CGGGCGGCCCCTTGATCTGCAATGGCATTCTTCATG...TCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | TGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAAAGGTCTAGTCCACCCCGTGCCACCACAGAAGTaGCTCCCAGGGAACCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: CVGGCVGERKAWKGLVHPVPPQK*LPGNLL Trigger: GAGCAGGTTCCCTGGGAGCCACTTCTGTGGTGGCAC...GGGGTGGACTAGACCTTTCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | CTCCACTCCAGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGCCACTCCATGAAGAATaGCATTGCAGATCAAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LHSRGCCVGGCVGERKAWPLHEE*HCRSRG Trigger: GCCCCTTGATCTGCAATGGCATTCTTCATGGAGTGG...CCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCTGGAGTGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | AGGGGGTGCTGCGTGGGTGGGTGCGTGGGTGAAAGAAAAGCCTGGAAAGGTCTAAGGGATGGATCCCCTTaGGGGATGGGTAGCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RGCCVGGCVGERKAWKGLRDGSP*GMGSFQ Trigger: CTGGAAGCTACCCATCCCCCAAGGGGATCCATCCCT...TAGACCTTTCCAGGCTTTTCTTTCACCCACGCACCCACCCACGCAGCACCCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR GCA 90 bp | CAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTGACTCCACTCCAGGGGCGTGGGTGCTTGGGTaGCCAGGCGACCCCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QFLLRSYGIGNRADSTPGAWVLG*PGDPSP Trigger: TGGGCTGGGGTCGCCTGGGCACCCAAGCACCCACGC...CCCTGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR CCA 90 bp | TCTCAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTGACTCCACTCCACCCTGGGACAGAGTCTaGTCCTGCTGGGGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SQFLLRSYGIGNRADSTPPWDRV*SCWGRE Trigger: TTCTCTGCCCCAGCAGGACCAGACTCTGTCCCAGGG...TGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR TCA 90 bp | CAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTGACTCCACTCCAGGGTTGTTCTGGAAGACCTaGCTGATGGTGAACTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QFLLRSYGIGNRADSTPGLFWKT*LMVNFC Trigger: GCAGAAGTTCACCATCAGTCAGGTCTTCCAGAACAA...CCCTGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS-3UTR TCA 90 bp | CAGTTTTTATTGAGGTCATATGGAATAGGGAACAGAGCTGACTCCACTCCAGGGAAGGAGTCCACTCCATaGAGAATGCCATTGCAGATC | + |
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Preference number: 4 (lower is better) Translates to: QFLLRSYGIGNRADSTPGKESTP*RMPLQI Trigger: GATCTGCAATGGCATTCTTCATGGAGTGGACTCCTT...CCCTGGAGTGGAGTCAGCTCTGTTCCCTATTCCATATGACCTCAATAAAAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 90 bp | GTGGGGCCGAGCCTCGTGCCCACCTACAATCTTGGAGGCCTGGACTaGGCCACCAACCACCAGGGCAAGCAGCAGGAAGGGATGGATCCC | + |
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Preference number: 5 (lower is better) Translates to: VGPSLVPTYNLGGLD*ATNHQGKQQEGMDP Trigger: GGGATCCATCCCTTCCTGCTGCTTGCCCTGGTGGTTGGTGGCGCAGTCCAGGCCTCCAAGATTGTAGGTGGGCACGAGGCTCGGCCCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS CCA 90 bp | CGAGAGTGGGGCCGAGCCTCGTGCCCACCTACAATCTTGGAGGCCTaGACTGCGCCACCAACCACCAGGGCAAGCAGCAGGAAGGGATGG | + |
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Preference number: 5 (lower is better) Translates to: REWGRASCPPTILEA*TAPPTTRASSRKGW Trigger: CCATCCCTTCCTGCTGCTTGCCCTGGTGGTTGGTGGCGCAGTCCAGGCCTCCAAGATTGTAGGTGGGCACGAGGCTCGGCCCCACTCTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 90 bp | TTGTGTTCCCGGCATAGGAAGGTGACCACCGTGACGTTCAGTTCCTaGAGCACACGGGGCGTGGGTGCTTGGGTGCCCAGGCGACCCCAG | + |
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Preference number: 5 (lower is better) Translates to: LCSRHRKVTTVTFSS*STRGVGAWVPRRPQ Trigger: CTGGGGTCGCCTGGGCACCCAAGCACCCACGCCCCGTGTGCTGCAGGAACTGAACGTCACGGTGGTCACCTTCCTATGCCGGGAACACAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006679.15 ENSMUST00000166201.2 |
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| CDS CCA 90 bp | CATAAGGCCGAGAGTGGGGCCGAGCCTCGTGCCCACCTACAATCTTaGAGGCCTGGACTGCGCCACCAACCACCAGGGCAAGCAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: HKAESGAEPRAHLQS*RPGLRHQPPGQAAG Trigger: TCCTGCTGCTTGCCCTGGTGGTTGGTGGCGCAGTCCAGGCCTCCAAGATTGTAGGTGGGCACGAGGCTCGGCCCCACTCTCGGCCTTATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS TCA 90 bp | AACTGGAGGGAGGCGCATTCGCGGATCACGAAGGAGTCCACTCCATaGAGAATGCCATTGCAGATCAAGGGGCCGCCCGAGTCTCCGAAG | + |
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Preference number: 5 (lower is better) Translates to: NWREAHSRITKESTP*RMPLQIKGPPESPK Trigger: CTTCGGAGACTCGGGCGGCCCCTTGATCTGCAATGGCATTCTTCATGGAGTGGACTCCTTCGTGATCCGCGAATGCGCCTCCCTCCAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 90 bp | GGGAGGCGCATTCGCGGATCACGAAGGAGTCCACTCCATGAAGAATaGCATTGCAGATCAAGGGGCCGCCCGAGTCTCCGAAGCATATGC | + |
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Preference number: 5 (lower is better) Translates to: GRRIRGSRRSPLHEE*HCRSRGRPSLRSIC Trigger: GCATATGCTTCGGAGACTCGGGCGGCCCCTTGATCTGCAATGGCATTCTTCATGGAGTGGACTCCTTCGTGATCCGCGAATGCGCCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 72 bp | AGCAGGTCGTGGGCACCCAGCACCACTGTCACAAGCTaGCAGGAGATGTCCTGCAGGCAGTGGGCGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SRSWAPSTTVTS*QEMSCRQWAAV Trigger: GACAGCCGCCCACTGCCTGCAGGACATCTCCTGGCAGCTTGTGACAGTGGTGCTGGGTGCCCACGACCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 72 bp | TGCAGATCAAGGGGCCGCCCGAGTCTCCGAAGCATATaGCTGCTGCCCTCCGTGGCACCAGCGTGCACACGT | + |
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Preference number: 6 (lower is better) Translates to: CRSRGRPSLRSI*LLPSVAPACTR Trigger: ACGTGTGCACGCTGGTGCCACGGAGGGCAGCAGGCATATGCTTCGGAGACTCGGGCGGCCCCTTGATCTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 72 bp | CCCAGCACCACTGTCACAAGCTGCCAGGAGATGTCCTaGAGGCAGTGGGCGGCTGTCAGCACGAATCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PSTTVTSCQEMS*RQWAAVSTNLG Trigger: CCCGAGATTCGTGCTGACAGCCGCCCACTGCCTGCAGGACATCTCCTGGCAGCTTGTGACAGTGGTGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS TCA 72 bp | GAGGCGCATTCGCGGATCACGAAGGAGTCCACTCCATaGAGAATGCCATTGCAGATCAAGGGGCCGCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: EAHSRITKESTP*RMPLQIKGPPE Trigger: CTCGGGCGGCCCCTTGATCTGCAATGGCATTCTTCATGGAGTGGACTCCTTCGTGATCCGCGAATGCGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS CCA 72 bp | ACATACATGGACACCCGGGCGAAGAAATCAGGGAACTaGAGGGAGGCGCATTCGCGGATCACGAAGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: TYMDTRAKKSGN*REAHSRITKES Trigger: GGACTCCTTCGTGATCCGCGAATGCGCCTCCCTCCAGTTCCCTGATTTCTTCGCCCGGGTGTCCATGTATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS GCA 72 bp | ATTCGCGGATCACGAAGGAGTCCACTCCATGAAGAATaGCATTGCAGATCAAGGGGCCGCCCGAGTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: IRGSRRSPLHEE*HCRSRGRPSLR Trigger: TCGGAGACTCGGGCGGCCCCTTGATCTGCAATGGCATTCTTCATGGAGTGGACTCCTTCGTGATCCGCGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006679.15 |
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| CDS TCA 72 bp | AGGCTGTCCGGTTTAGCTGGAGGAGAAGCACGTCATTaGGGTTCTCCTCGGGGTTGTAATTGTTCTGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: RLSGLAGGEARH*GSPRGCNCSGR Trigger: TCTTCCAGAACAATTACAACCCCGAGGAGAACCTCAATGACGTGCTTCTCCTCCAGCTAAACCGGACAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006679.15 ENSMUST00000166201.2 |
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