Pregenerated sensors for PRSS8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030800Ensembl transcript IDs: ENSMUST00000032988.10, ENSMUST00000206124.2, ENSMUST00000206568.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGGCAGCTACAGGTTTCCCGGCTGATGAGTGGTACCTCGAGCTaGTGCAGAGGCCTAGGGGTCTGGAGGCTCACTGAAGGAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: YRQLQVSRLMSGTSS*CRGLGVWRLTEGAT Trigger: TGTGGCTCCTTCAGTGAGCCTCCAGACCCCTAGGCCTCTGCAGCAGCTCGAGGTACCACTCATCAGCCGGGAAACCTGTAGCTGCCTGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR GCA 90 bp | TCCCGTGACAGTACAGTGAAGGCCGTTGGGAAAGGAGGCATTGGCTaGAGGGAGGCAGATGGGTCTGATGTAGCGGGAGAAGGTGACAGG | + |
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Preference number: 1 (lower is better) Translates to: SRDSTVKAVGKGGIG*READGSDVAGEGDR Trigger: CCTGTCACCTTCTCCCGCTACATCAGACCCATCTGCCTCCCTGCAGCCAATGCCTCCTTTCCCAACGGCCTTCACTGTACTGTCACGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR GCA 90 bp | AAGAACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTaGCCTCCCGGACAGGCACATGTCCTTGGGTGTGCTGTGGTCCTG | + |
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Preference number: 1 (lower is better) Translates to: KNKCRRVGSKIKSAC*PPGQAHVLGCAVVL Trigger: CAGGACCACAGCACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR GCA 90 bp | CCAAAGAACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATaGTGCCCTCCCGGACAGGCACATGTCCTTGGGTGTGCTGTGGTC | + |
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Preference number: 1 (lower is better) Translates to: PKNKCRRVGSKIKSA*CPPGQAHVLGCAVV Trigger: GACCACAGCACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR GCA 90 bp | GCAGTAAACTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATaGAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTGCCCTCCC | + |
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Preference number: 1 (lower is better) Translates to: AVNFLALDYIIPKNK*RRVGSKIKSACCPP Trigger: GGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAGTTTACTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCTCCGGTGGGGGCTCAGTCCTCCGGAGTCCAGGAGATTAAGGCAGAGCCCACATGTCCTTGGGTGTaGTGTGGTCCTGGAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: PAPVGAQSSGVQEIKAEPTCPWV*CGPGSM Trigger: CATGCTTCCAGGACCACAGCACACCCAAGGACATGT...GGGCTCTGCCTTAATCTCCTGGACTCCGGAGGACTGAGCCCCCACCGGAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGCTCCGGTGGGGGCTCAGTCCTCCGGAGTCCAGGAGATTAAGGCAGAGCCCGTGCTAGATACAGGCTaGAGTGAGGGCTCATTTTCC | + |
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Preference number: 2 (lower is better) Translates to: PAPVGAQSSGVQEIKAEPVLDTG*SEGSFS Trigger: GGAAAATGAGCCCTCACTTCAGCCTGTATCTAGCAC...GGGCTCTGCCTTAATCTCCTGGACTCCGGAGGACTGAGCCCCCACCGGAGCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGAGTGGTACCTCGAGCTGCTGCAGAGGCCTAGGGGTCTGGAGGCTCACTCCCGTGACAGTACAGTaGAGGCCGTTGGGAAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LMSGTSSCCRGLGVWRLTPVTVQ*RPLGKE Trigger: CTCCTTTCCCAACGGCCTTCACTGTACTGTCACGGG...AGTGAGCCTCCAGACCCCTAGGCCTCTGCAGCAGCTCGAGGTACCACTCATCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACCCCAGCCAGCTCCGGTaGGGGCTCAGTCCTCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: DFGGTQRCQRVVFFISSHPSQLR*GLSPPE Trigger: CTCCGGAGGACTGAGCCCCCACCGGAGCTGGCTGGG...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGAAGAGGACAAAGTGAAGGGCTCATCAGGCAGGGTGGGTAGAGCCCAGACAAATGCAGACGAGTaGGCTCAAAGATCAAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: RQEEDKVKGSSGRVGRAQTNADE*AQRSSR Trigger: CCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGT...CTGGGCTCTACCCACCCTGCCTGATGAGCCCTTCACTTTGTCCTCTTCCTGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCTGGATAGTGTGCGGTTCTTCAGGCACCGCATTAATGTTGTACAGGCAGCTAAAGGAGGCATTGGCTaGAGGGAGGCAGATGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: LLDSVRFFRHRINVVQAAKGGIG*READGS Trigger: AGACCCATCTGCCTCCCTGCAGCCAATGCCTCCTTT...AGCTGCCTGTACAACATTAATGCGGTGCCTGAAGAACCGCACACTATCCAGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCTGCTGGATAGTGTGCGGTTCTTCAGGCACCGCATTAATGTTGTACAGGTGGGAAAGGAGGCATTaGCTGCAGGGAGGCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: MSCWIVCGSSGTALMLYRWERRH*LQGGRW Trigger: CCATCTGCCTCCCTGCAGCCAATGCCTCCTTTCCCA...CCTGTACAACATTAATGCGGTGCCTGAAGAACCGCACACTATCCAGCAGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCTGCTGGATAGTGTGCGGTTCTTCAGGCACCGCATTAATGTTGTACAGGACTGAAGGAGCCACATaGCCCCATCCCGTGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: MSCWIVCGSSGTALMLYRTEGAT*PHPVTV Trigger: TACTGTCACGGGATGGGGTCATGTGGCTCCTTCAGT...CCTGTACAACATTAATGCGGTGCCTGAAGAACCGCACACTATCCAGCAGGACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATGCTCATTTTCCTAGCTaGGGCTTCTGGGAGCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: WCTGLWRYAEMPKGGILHAHFPS*GFWELH Trigger: ATGGAGCTCCCAGAAGCCTCAGCTAGGAAAATGAGC...ATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR TCA 90 bp | ACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTTTTTATTCCTCACCCTaGCCCAAGCCCCAGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: TQRCQRVVFFISSHRQPAFYSSP*PKPQPA Trigger: AGCTGGCTGGGGCTTGGGTCAGGGTGAGGAATAAAA...AGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | AGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAGCTCATCAGGCAGGGTaGGTAGAGCCCAGAGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RCQRVVFFISSHRQPAVLAHQAG*VEPRVS Trigger: GCTGACTCTGGGCTCTACCCACCCTGCCTGATGAGC...TAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR TCA 90 bp | ACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGCTCATTTTCCTAGCTaGGGCTTCTGGGAGCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: TQRCQRVVFFISSHRQPAAHFPS*GFWELH Trigger: ATGGAGCTCCCAGAAGCCTCAGCTAGGAAAATGAGC...AGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACACAGGCACATGTCCTTaGGTGTGCTGTGGTCCTGGA | + |
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Preference number: 2 (lower is better) Translates to: DFGGTQRCQRVVFFISSHTGTCP*VCCGPG Trigger: TCCAGGACCACAGCACACCCAAGGACATGTGCCTGT...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | ACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGGTAACAGAGAAAGGTaGCTAGAGTTCCTGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: TQRCQRVVFFISSHRQPAGNRER*LEFLPA Trigger: AGCGGGCAGGAACTCTAGCCACCTTTCTCTGTTACC...AGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACACATGTCCTTGGGTGTaGTGTGGTCCTGGAAGCATG | + |
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Preference number: 2 (lower is better) Translates to: DFGGTQRCQRVVFFISSHTCPWV*CGPGSM Trigger: CATGCTTCCAGGACCACAGCACACCCAAGGACATGT...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGATTCCTCGCTCCTCCTTGGGTGTGCTGTaGTCCTGGAAGCATGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: FISSHRQPAVLKTLIPRSSLGVL*SWKHGQ Trigger: TTGACCATGCTTCCAGGACCACAGCACACCCAAGGA...GGAGCGAGGAATCAATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGATTCCTCGCTCCTTGGGTGTGCTGTaGTCCTGGAAGCATGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: FFISSHRQPAVLKTLIPRSLGVL*SWKHGQ Trigger: TTGACCATGCTTCCAGGACCACAGCACACCCAAGGA...GCGAGGAATCAATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGGTAACAGAGAAAGGTaGCTAGAGTTCCTGCCCGCT | + |
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Preference number: 2 (lower is better) Translates to: KGGILHFISQTASCVKNIGNRER*LEFLPA Trigger: AGCGGGCAGGAACTCTAGCCACCTTTCTCTGTTACC...AATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTTTGTGTCATTTATTCATAAAGTAAAATCTGCTGGTGCACTGGACTTTGGATTTTATTCCTCACCCTaGCCCAAGCCCCAGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: CFVSFIHKVKSAGALDFGFYSSP*PKPQPA Trigger: AGCTGGCTGGGGCTTGGGTCAGGGTGAGGAATAAAA...TCCAAAGTCCAGTGCACCAGCAGATTTTACTTTATGAATAAATGACACAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTACAAATGCAGACGAGTaGGCTCAAAGATCAAGTCGG | + |
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Preference number: 2 (lower is better) Translates to: KGGILHFISQTASCVKNITNADE*AQRSSR Trigger: CCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGT...AATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR GCA 72 bp | CAGGTTTCCCGGCTGATGAGTGGTACCTCGAGCTGCTaGAGAGGCCTAGGGGTCTGGAGGCTCACTGAAGGA | + |
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Preference number: 3 (lower is better) Translates to: QVSRLMSGTSSC*RGLGVWRLTEG Trigger: TCCTTCAGTGAGCCTCCAGACCCCTAGGCCTCTGCAGCAGCTCGAGGTACCACTCATCAGCCGGGAAACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR GCA 72 bp | TGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTaGCCTCCCGGACAGGCACATGTCCTTGGGTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: CRRVGSKIKSAC*PPGQAHVLGCA Trigger: AGCACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR CCA 72 bp | GTCGGCATGCTGCCCTCCCGGACAGGCACATGTCCTTaGGTGTGCTGTGGTCCTGGAAGCATGGTCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: VGMLPSRTGTCP*VCCGPGSMVNF Trigger: AAAGTTGACCATGCTTCCAGGACCACAGCACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCATGCCGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR TCA 72 bp | GGAGGCTCACTGAAGGAGCCACATGACCCCATCCCGTaGCAGTACAGTGAAGGCCGTTGGGAAAGGAGGCAT | + |
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Preference number: 3 (lower is better) Translates to: GGSLKEPHDPIP*QYSEGRWERRH Trigger: ATGCCTCCTTTCCCAACGGCCTTCACTGTACTGTCACGGGATGGGGTCATGTGGCTCCTTCAGTGAGCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| 3UTR GCA 72 bp | ATGCTGCCCTCCCGGACAGGCACATGTCCTTGGGTGTaGTGTGGTCCTGGAAGCATGGTCAACTTTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: MLPSRTGTCPWV*CGPGSMVNFEG Trigger: ACCCTCAAAGTTGACCATGCTTCCAGGACCACAGCACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR GCA 72 bp | AAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATaGTGCCCTCCCGGACAGGCACATGTCCTTGGGTGT | + |
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Preference number: 3 (lower is better) Translates to: KCRRVGSKIKSA*CPPGQAHVLGC Trigger: ACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR CCA 72 bp | CACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTaGTATTCTTCATTTCATCTCACAGACAGCCAGCTG | + |
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Preference number: 3 (lower is better) Translates to: HWTLEVRRDAKG*YSSFHLTDSQL Trigger: CAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR GCA 72 bp | TCTGCTGGTGCACTGGACTTTGGAGGTACGCAGAGATaGCAAAGGGTGGTATTCTTCATTTCATCTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: SAGALDFGGTQR*QRVVFFISSHR Trigger: TCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGACAGGCACATGTCCTaGGGTGTGCTGTGGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: KGGILHFISQTASCVKNIDRHMS*GVLWSW Trigger: CCAGGACCACAGCACACCCAAGGACATGTGCCTGTC...AATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTAGCCCAGAGTCAGCCTaGTGCAGCAGTCAGCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: KGGILHFISQTASCVKNISPESA*CSSQLG Trigger: GCCTAGCTGACTGCTGCACAAGGCTGACTCTGGGCT...AATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR GCA 72 bp | TTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATaGAGACGAGTGGGCTCAAAGATCAAGTCGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: FLALDYIIPKNK*RRVGSKIKSAC Trigger: GCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR-3UTR CAA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACGCTGTGTTAAAAACATaGATTCCTCGCTCCTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: DFGGTQRCQRVVFFISSHAVLKT*IPRSFY Trigger: ATAAAAGGAGCGAGGAATCAATGTTTTTAACACAGC...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCGGTGGGGGCTCAGTCCTCCGGAGTCCAGGAGATTAAGGCAGAGCCCCGAGAAGGAGCAGAATaGTCACAGCTTCCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: PAPVGAQSSGVQEIKAEPREGAE*SQLPAA Trigger: GGCAGCTGGAAGCTGTGACCATTCTGCTCCTTCTCG...GGGCTCTGCCTTAATCTCCTGGACTCCGGAGGACTGAGCCCCCACCGGAGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR TCA 90 bp | AACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTGCCCTCCCGGAACCTGCCAGGGCCACTaGCCGGGCTTTGCACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: NKCRRVGSKIKSACCPPGTCQGH*PGFALP Trigger: TGGCAGTGCAAAGCCCGGTCAGTGGCCCTGGCAGGT...TCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR CCA 90 bp | GCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTGCCCTCCCGGACAGGCACCGAGAAGGAGCAGAATaGTCACAGCTTCCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ADEWAQRSSRHAALPDRHREGAE*SQLPAA Trigger: GGCAGCTGGAAGCTGTGACCATTCTGCTCCTTCTCG...GTGCCTGTCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGGAAGAGGACAAAGTGAAGGGCTCATCAGGCAGGGTGGGTAGAGCCCAGACCAGATGCCCTCCATaGGACAAGAGAGTGGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: RQEEDKVKGSSGRVGRAQTRCPP*DKRVGP Trigger: GGGGCCCACTCTCTTGTCCCATGGAGGGCATCTGGT...CTGGGCTCTACCCACCCTGCCTGATGAGCCCTTCACTTTGTCCTCTTCCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| 3UTR CAA 72 bp | AGTCGGCATGCTGCCCTCCCGGACAGGCACATGTCCTaGGGTGTGCTGTGGTCCTGGAAGCATGGTCAACTT | + |
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Preference number: 4 (lower is better) Translates to: SRHAALPDRHMS*GVLWSWKHGQL Trigger: AAGTTGACCATGCTTCCAGGACCACAGCACACCCAAGGACATGTGCCTGTCCGGGAGGGCAGCATGCCGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR GCA 90 bp | GTGGGTGATGATCTGAGCCACTGTGTGGACCACAGTGTCATTGCTGTAGGAGTCGTCACAGCTTCCAGCTaGCCAAGTCCCAGGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: VGDDLSHCVDHSVIAVGVVTASS*PSPRPT Trigger: GGTGGGCCTGGGACTTGGGCAGCTGGAAGCTGTGAC...GACTCCTACAGCAATGACACTGTGGTCCACACAGTGGCTCAGATCATCACCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
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| CDS-3UTR CCA 90 bp | AAAGTGAAGGGCTCATCAGGCAGGGTGGGTAGAGCCCAGAGTCAGCCTTGTGCATGGGAAAGGAGGCATTaGCTGCAGGGAGGCAGATGG | + |
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Preference number: 4 (lower is better) Translates to: KVKGSSGRVGRAQSQPCAWERRH*LQGGRW Trigger: CCATCTGCCTCCCTGCAGCCAATGCCTCCTTTCCCA...TGCACAAGGCTGACTCTGGGCTCTACCCACCCTGCCTGATGAGCCCTTCACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR CCA 90 bp | AACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTGCCCTCCCGGACATGGGACAAGAGAGTaGGCCCCCAGAGTCACCCTG | + |
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Preference number: 4 (lower is better) Translates to: NKCRRVGSKIKSACCPPGHGTRE*APRVTL Trigger: CAGGGTGACTCTGGGGGCCCACTCTCTTGTCCCATG...TCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
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| CDS-3UTR GCA 90 bp | CGGACAGGCACATGTCCTTGGGTGTGCTGTGGTCCTGGAAGCATGGTCAACTTTCCTGGCAGGCATCCTTaGCTCCCTTCACATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGTCPWVCCGPGSMVNFPGRHP*LPSHSQ Trigger: CTGGCTATGTGAAGGGAGGCAAGGATGCCTGCCAGG...AAAGTTGACCATGCTTCCAGGACCACAGCACACCCAAGGACATGTGCCTGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | AAAGTGAAGGGCTCATCAGGCAGGGTGGGTAGAGCCCAGAGTCAGCCTTGTGCATGGAGCTCTGCCACATaGTGGTGGATCCAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KVKGSSGRVGRAQSQPCAWSSAT*WWIQEA Trigger: TGCTTCCTGGATCCACCACCATGTGGCAGAGCTCCA...TGCACAAGGCTGACTCTGGGCTCTACCCACCCTGCCTGATGAGCCCTTCACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | AACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTGCCCTCCCGGAGAGTGGGTGATGATCTaGGCCACTGTGTGGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: NKCRRVGSKIKSACCPPGEWVMI*ATVWTT Trigger: TGTGGTCCACACAGTGGCTCAGATCATCACCCACTC...TCCGGGAGGGCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | CGGACAGGCACATGTCCTTGGGTGTGCTGTGGTCCTGGAAGCATGGTCAACTTTGAGCTGAAGACAGGATaGTGGTTGCAGAGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTGTCPWVCCGPGSMVNFELKTG*WLQRWP Trigger: TGGCCACCTCTGCAACCATCATCCTGTCTTCAGCTC...AAAGTTGACCATGCTTCCAGGACCACAGCACACCCAAGGACATGTGCCTGTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | GCACATGTCCTTGGGTGTGCTGTGGTCCTGGAAGCATGGTCAACTTTGAGGGTTCCTGGCAGGCATCCTTaGCTCCCTTCACATAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHVLGCAVVLEAWSTLRVPGRHP*LPSHSQ Trigger: CTGGCTATGTGAAGGGAGGCAAGGATGCCTGCCAGG...AACCCTCAAAGTTGACCATGCTTCCAGGACCACAGCACACCCAAGGACATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | ACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTCCCCCAGAGTCACCCTaGCAGGCATCCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TQRCQRVVFFISSHRQPAPPESP*QASLPP Trigger: GGGAGGCAAGGATGCCTGCCAGGGTGACTCTGGGGG...AGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGTGATGATCTGAGCCACTGTGTGGACCACAGTGTCATTGCTGTAGGAGTCCGAGAAGGAGCAGAATaGTCACAGCTTCCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VGDDLSHCVDHSVIAVGVREGAE*SQLPAA Trigger: GGCAGCTGGAAGCTGTGACCATTCTGCTCCTTCTCG...GACTCCTACAGCAATGACACTGTGGTCCACACAGTGGCTCAGATCATCACCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206568.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATACCACCGGTGATGCGTaGCTGGATGACGGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: WCTGLWRYAEMPKGGILHTTGDA*LDDGTT Trigger: TGTGGTGCCGTCATCCAGCCACGCATCACCGGTGGT...ATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCACCTGCCAGGGCCACTaGCCGGGCTTTGCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGPRLYNPKEQMQTSGLTCQGH*PGFALP Trigger: TGGCAGTGCAAAGCCCGGTCAGTGGCCCTGGCAGGT...GAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | TGGTGCACTGGACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATATACTCCAGGCCTGTTaGGGGCACCACAGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: WCTGLWRYAEMPKGGILHILQAC*GHHRHH Trigger: GTGATGCCTGTGGTGCCCCCAACAGGCCTGGAGTAT...ATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTCCAGTGCACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | ATCCCAAAGAACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCATGCTGCATACTCCAGGCCTGTTaGGGGCACCACAGGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: IPKNKCRRVGSKIKSACCILQAC*GHHRHH Trigger: GTGATGCCTGTGGTGCCCCCAACAGGCCTGGAGTAT...GCAGCATGCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTTTGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACACCAGATGCCCTCCATaGGACAAGAGAGTGGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DFGGTQRCQRVVFFISSHTRCPP*DKRVGP Trigger: GGGGCCCACTCTCTTGTCCCATGGAGGGCATCTGGT...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGATTCCTCGCTCCGTCACAGCTTCCAGCTaGCCAAGTCCCAGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: FISSHRQPAVLKTLIPRSVTASS*PSPRPT Trigger: GGTGGGCCTGGGACTTGGGCAGCTGGAAGCTGTGAC...GGAGCGAGGAATCAATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAACCACCGGTGATGCGTaGCTGGATGACGGCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVVFFISSHRQPAVLTTGDA*LDDGTT Trigger: TGTGGTGCCGTCATCCAGCCACGCATCACCGGTGGT...TAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGATTCCTCGCCCCCCAGAGTCACCCTaGCAGGCATCCTTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFISSHRQPAVLKTLIPRPPESP*QASLPP Trigger: GGGAGGCAAGGATGCCTGCCAGGGTGACTCTGGGGG...GCGAGGAATCAATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAA 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | AGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTACATGGGACAAGAGAGTaGGCCCCCAGAGTCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVVFFISSHRQPAVLHGTRE*APRVTL Trigger: CAGGGTGACTCTGGGGGCCCACTCTCTTGTCCCATG...TAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | AGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTACCCGTGACAGTACAGTaGAGGCCGTTGGGAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVVFFISSHRQPAVLPVTVQ*RPLGKE Trigger: CTCCTTTCCCAACGGCCTTCACTGTACTGTCACGGG...TAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | CTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCAAAGGGCTGCCGCTGAGCTaGAGACAGGATGATGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGPRLYNPKEQMQTSGLKGLPLS*RQDDGC Trigger: GCAACCATCATCCTGTCTTCAGCTCAGCGGCAGCCC...TTTGAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | AAACTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGGTCACAGCTTCCAGCTaGCCAAGTCCCAGGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLLGPRLYNPKEQMQTSGVTASS*PSPRPT Trigger: GGTGGGCCTGGGACTTGGGCAGCTGGAAGCTGTGAC...CCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAAAGGAGGCATTGGCTaGAGGGAGGCAGATGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DFGGTQRCQRVVFFISSHKGGIG*READGS Trigger: AGACCCATCTGCCTCCCTGCAGCCAATGCCTCCTTT...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | AGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAGAGTGGGTGATGATCTaGGCCACTGTGTGGACCACA | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVVFFISSHRQPAVLEWVMI*ATVWTT Trigger: TGTGGTCCACACAGTGGCTCAGATCATCACCCACTC...TAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCACTGAAGGAGCCACATaGCCCCATCCCGTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLGPRLYNPKEQMQTSGLTEGAT*PHPVTV Trigger: TACTGTCACGGGATGGGGTCATGTGGCTCCTTCAGT...GAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | AAACTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGGGGCTGCCGCTGAGCTaGAGACAGGATGATGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLLGPRLYNPKEQMQTSGGLPLS*RQDDGC Trigger: GCAACCATCATCCTGTCTTCAGCTCAGCGGCAGCCC...CCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAGTTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | GACTTTGGAGGTACGCAGAGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACCCAACTCACAATGCCTaGCAAGTACCAGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFGGTQRCQRVVFFISSHPTHNA*QVPDAL Trigger: GAGGGCATCTGGTACTTGGCAGGCATTGTGAGTTGG...GTGAGATGAAATGAAGAATACCACCCTTTGGCATCTCTGCGTACCTCCAAAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCTGGAGCTCTGCCACATaGTGGTGGATCCAGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLGPRLYNPKEQMQTSGLWSSAT*WWIQEA Trigger: TGCTTCCTGGATCCACCACCATGTGGCAGAGCTCCA...GAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | TTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCGAGCTGAAGACAGGATaGTGGTTGCAGAGGTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LYNPKEQMQTSGLKDQVGELKTG*WLQRWP Trigger: TGGCCACCTCTGCAACCATCATCCTGTCTTCAGCTC...GCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | TTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGATTCCTCGCTCCAAAGGAGGCATTGGCTaGAGGGAGGCAGATGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FISSHRQPAVLKTLIPRSKGGIG*READGS Trigger: AGACCCATCTGCCTCCCTGCAGCCAATGCCTCCTTT...GGAGCGAGGAATCAATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | AGATGCCAAAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTACACCCCAACTCACAATaGCTGCCAAGTACCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RCQRVVFFISSHRQPAVLHPNSQ*LPSTRC Trigger: GCATCTGGTACTTGGCAGGCATTGTGAGTTGGGGTG...TAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTTTGGCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCCACCCCAACTCACAATaGCTGCCAAGTACCAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGPRLYNPKEQMQTSGLHPNSQ*LPSTRC Trigger: GCATCTGGTACTTGGCAGGCATTGTGAGTTGGGGTG...GAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | AAACTTCTTGGCCCTAGATTATATAATCCCAAAGAACAAATGCAGACGAGTGGGTGGGAAAGGAGGCATTaGCTGCAGGGAGGCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLLGPRLYNPKEQMQTSGWERRH*LQGGRW Trigger: CCATCTGCCTCCCTGCAGCCAATGCCTCCTTTCCCA...CCCACTCGTCTGCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | TTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTGATTCCTCGCTCCCAGGGTCAGACCAAGTaGCAGGAAAAGTACGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FISSHRQPAVLKTLIPRSQGQTK*QEKYGP Trigger: AGGCCCGTACTTTTCCTGCCACTTGGTCTGACCCTG...GGAGCGAGGAATCAATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR GCA 90 bp | TTATATAATCCCAAAGAACAAATGCAGACGAGTGGGCTCAAAGATCAAGTCGGCCCAACTCACAATGCCTaGCAAGTACCAGATGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LYNPKEQMQTSGLKDQVGPTHNA*QVPDAL Trigger: GAGGGCATCTGGTACTTGGCAGGCATTGTGAGTTGG...GCCGACTTGATCTTTGAGCCCACTCGTCTGCATTTGTTCTTTGGGATTATATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGTGGTATTCTTCATTTCATCTCACAGACAGCCAGCTGTGTTAAAAACATTACTGAAGGAGCCACATaGCCCCATCCCGTGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGGILHFISQTASCVKNITEGAT*PHPVTV Trigger: TACTGTCACGGGATGGGGTCATGTGGCTCCTTCAGT...AATGTTTTTAACACAGCTGGCTGTCTGTGAGATGAAATGAAGAATACCACCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| 3UTR CAA 72 bp | CTAGAGTTCCTGCCCGCTCCACAGGCAGTAAACTTCTaGGCCCTAGATTATATAATCCCAAAGAACAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LEFLPAPQAVNF*ALDYIIPKNKC Trigger: GCATTTGTTCTTTGGGATTATATAATCTAGGGCCAAGAAGTTTACTGCCTGTGGAGCGGGCAGGAACTCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTTGTGTCATTTATTCATAAAGTAAAATCTGCTGGTGCACTGGACTTTGGACAGGGTCAGACCAAGTaGCAGGAAAAGTACGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CFVSFIHKVKSAGALDFGQGQTK*QEKYGP Trigger: AGGCCCGTACTTTTCCTGCCACTTGGTCTGACCCTG...TCCAAAGTCCAGTGCACCAGCAGATTTTACTTTATGAATAAATGACACAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS CCA 90 bp | CCAGGGCCACTGACCGGGCTTTGCACTGCCACCACCGGTGATGCGTaGCTGGATGACGGCACCACAGGAGGCTTCAGTCCCGTCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGPLTGLCTATTGDA*LDDGTTGGFSPVSS Trigger: CGAGCTGACGGGACTGAAGCCTCCTGTGGTGCCGTCATCCAGCCACGCATCACCGGTGGTGGCAGTGCAAAGCCCGGTCAGTGGCCCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS CCA 90 bp | CGTCAGCTCGGATTCCCGACTGGAGCAATCCGAGAAGGAGCAGAATaGTCACAGCTTCCAGCTGCCCAAGTCCCAGGCCCACCCTTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RQLGFPTGAIREGAE*SQLPAAQVPGPPLG Trigger: CCCTAAGGGTGGGCCTGGGACTTGGGCAGCTGGAAGCTGTGACCATTCTGCTCCTTCTCGGATTGCTCCAGTCGGGAATCCGAGCTGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 ENSMUST00000206568.2 |
||
| CDS CCA 90 bp | CACAATGCCTGCCAAGTACCAGATGCCCTCCATGGGACAAGAGAGTaGGCCCCCAGAGTCACCCTGGCAGGCATCCTTGCCTCCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HNACQVPDALHGTRE*APRVTLAGILASLH Trigger: GTGAAGGGAGGCAAGGATGCCTGCCAGGGTGACTCTGGGGGCCCACTCTCTTGTCCCATGGAGGGCATCTGGTACTTGGCAGGCATTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS CCA 90 bp | ACGGCACCACAGGAGGCTTCAGTCCCGTCAGCTCGGATTCCCGACTaGAGCAATCCGAGAAGGAGCAGAATGGTCACAGCTTCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TAPQEASVPSARIPD*SNPRRSRMVTASSC Trigger: GCAGCTGGAAGCTGTGACCATTCTGCTCCTTCTCGGATTGCTCCAGTCGGGAATCCGAGCTGACGGGACTGAAGCCTCCTGTGGTGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 ENSMUST00000206568.2 |
||
| CDS CCA 72 bp | CTGACCGGGCTTTGCACTGCCACCACCGGTGATGCGTaGCTGGATGACGGCACCACAGGAGGCTTCAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LTGLCTATTGDA*LDDGTTGGFSP Trigger: GGGACTGAAGCCTCCTGTGGTGCCGTCATCCAGCCACGCATCACCGGTGGTGGCAGTGCAAAGCCCGGTCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS TCA 72 bp | AACAATTTCGGGGCTGCCGCTGAGCTGAAGACAGGATaGTGGTTGCAGAGGTGGCCATCCGGCTGGGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: NNFGAAAELKTG*WLQRWPSGWDS Trigger: GGAGTCCCAGCCGGATGGCCACCTCTGCAACCATCATCCTGTCTTCAGCTCAGCGGCAGCCCCGAAATTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS GCA 72 bp | CATCACCCCAACTCACAATGCCTGCCAAGTACCAGATaGCCTCCATGGGACAAGAGAGTGGGCCCCCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HHPNSQCLPSTR*PPWDKRVGPQS Trigger: ACTCTGGGGGCCCACTCTCTTGTCCCATGGAGGGCATCTGGTACTTGGCAGGCATTGTGAGTTGGGGTGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS GCA 72 bp | CTCCTGAGTCTGGGGGACAACTCGAGGCTGGAGCTCTaGCACATGGTGGTGGATCCAGGAAGCATAGGTAGA | + |
|
Preference number: 6 (lower is better) Translates to: LLSLGDNSRLEL*HMVVDPGSIGR Trigger: TCTACCTATGCTTCCTGGATCCACCACCATGTGGCAGAGCTCCAGCCTCGAGTTGTCCCCCAGACTCAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 |
||
| CDS CCA 72 bp | CAGGAGGCTTCAGTCCCGTCAGCTCGGATTCCCGACTaGAGCAATCCGAGAAGGAGCAGAATGGTCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: QEASVPSARIPD*SNPRRSRMVTA Trigger: AGCTGTGACCATTCTGCTCCTTCTCGGATTGCTCCAGTCGGGAATCCGAGCTGACGGGACTGAAGCCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032988.10 ENSMUST00000206124.2 ENSMUST00000206568.2 |
||