Pregenerated sensors for PRSS58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051936Ensembl transcript IDs: ENSMUST00000063523.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 72 bp | ATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTaGCTTGTCACATGTTTCAGAATTCCTCCTGTTGTG | + |
Preference number: 3 (lower is better) Translates to: MSPFPLIVRVWM*LVTCFRIPPVV Trigger: CACAACAGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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3UTR CCA 72 bp | GGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTaGATGTGCCTTGTCACATGTTTCAGAATTCCTCCT | + |
Preference number: 3 (lower is better) Translates to: GLMSPFPLIVRV*MCLVTCFRIPP Trigger: AGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR TCA 90 bp | CACGGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCATTCACGGTCTGCAGTaGGTCAGGGTCTTTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: HGLMSPFPLIVRVWMCLVIHGLQ*VRVFGD Trigger: GTCACCAAAGACCCTGACTCACTGCAGACCGTGAAT...GACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR GCA 90 bp | CTCGCACGGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTGCAGGGTTGAAAGAATaGAGAGGAAGGCTAACTTCA | + |
Preference number: 4 (lower is better) Translates to: LARSNEPISFNCEGVDVPAGLKE*RGRLTS Trigger: TGAAGTTAGCCTTCCTCTGCATTCTTTCAACCCTGC...AGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACCGTGCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR TCA 90 bp | CCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTGCAGTGTGCAGCTGTaGTCACCCACAAAGGATGGA | + |
Preference number: 4 (lower is better) Translates to: PISFNCEGVDVPCHMFQNCSVQL*SPTKDG Trigger: TCCATCCTTTGTGGGTGATCACAGCTGCACACTGCA...ATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR GCA 90 bp | GAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGCCTTTCCATGGGATCTaGTGGATTTGTTATCCCAAG | + |
Preference number: 4 (lower is better) Translates to: EPISFNCEGVDVPCHMFQPFHGI*WICYPK Trigger: CTTGGGATAACAAATCCAGCAGATCCCATGGAAAGG...CTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR CCA 90 bp | GTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTCCTCCTGTTGTGGGATTCCATGGGATCTGCTaGATTTGTTATCCCAAGAAT | + |
Preference number: 4 (lower is better) Translates to: VRVWMCLVTCFRIPPVVGFHGIC*ICYPKN Trigger: ATTCTTGGGATAACAAATCCAGCAGATCCCATGGAA...TCCCACAACAGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR GCA 90 bp | CCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTGGATCAGGACTCCAGTaGAGGGCAAGTAATCAGACT | + |
Preference number: 4 (lower is better) Translates to: PFPLIVRVWMCLVTCFRIGSGLQ*RASNQT Trigger: AGTCTGATTACTTGCCCTGCACTGGAGTCCTGATCC...AATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR CCA 90 bp | ATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCGCCAGCTATGTGATCTaGATTATAGGCAAAGGTACG | + |
Preference number: 4 (lower is better) Translates to: MSPFPLIVRVWMCLVTCFASYVI*IIGKGT Trigger: CGTACCTTTGCCTATAATCCAGATCACATAGCTGGC...GAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS TCA 90 bp | ACAAGATTCCATAAAGTACCCCGTTGCAGACTGCTGGGGCAGCCGTaGCTTCCTTGCAAGGCAGCCTCCGCCCTGGCACGATGCCTACGC | + |
Preference number: 5 (lower is better) Translates to: TRFHKVPRCRLLGQP*LPCKAASALARCLR Trigger: GCGTAGGCATCGTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS GCA 90 bp | GCCATCTGCATAAGACAAGATTCCATAAAGTACCCCGTTGCAGACTaGTGGGGCAGCCGTGACTTCCTTGCAAGGCAGCCTCCGCCCTGG | + |
Preference number: 5 (lower is better) Translates to: AICIRQDSIKYPVAD*WGSRDFLARQPPPW Trigger: CCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCTTATGCAGATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS CCA 90 bp | ATCTGCATAAGACAAGATTCCATAAAGTACCCCGTTGCAGACTGCTaGGGCAGCCGTGACTTCCTTGCAAGGCAGCCTCCGCCCTGGCAC | + |
Preference number: 5 (lower is better) Translates to: ICIRQDSIKYPVADC*GSRDFLARQPPPWH Trigger: GTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCTTATGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR CAA 90 bp | GCACGGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTGCAGCCGTGACTTCCTaGCAAGGCAGCCTCCGCCCT | + |
Preference number: 5 (lower is better) Translates to: ARSNEPISFNCEGVDVPCAAVTS*QGSLRP Trigger: AGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGC...ACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACCGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS TCA 90 bp | TCCCAAGAATCACTTGAAGGTTCGGTAAATTGCAGTGTGCAGCTGTaGTCACCCACAAAGGATGGATCAGGACTCCAGTGCAGGGCAAGT | + |
Preference number: 5 (lower is better) Translates to: SQESLEGSVNCSVQL*SPTKDGSGLQCRAS Trigger: ACTTGCCCTGCACTGGAGTCCTGATCCATCCTTTGTGGGTGATCACAGCTGCACACTGCAATTTACCGAACCTTCAAGTGATTCTTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR CAA 90 bp | GAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTCCTCCTGTTGTGGGAGCATCCGTCTTTTCAGTTaGATTAACAGGAGGTCATGT | + |
Preference number: 5 (lower is better) Translates to: EGVDVPCHMFQNSSCCGSIRLFS*INRRSC Trigger: ACATGACCTCCTGTTAATCAAACTGAAAAGACGGAT...GCTCCCACAACAGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS TCA 90 bp | TCCCTTTCCATGGGATCTGCTGGATTTGTTATCCCAAGAATCACTTaGAGGTTCGGTAAATTGCAGTGTGCAGCTGTGATCACCCACAAA | + |
Preference number: 5 (lower is better) Translates to: SLSMGSAGFVIPRIT*RFGKLQCAAVITHK Trigger: TTTGTGGGTGATCACAGCTGCACACTGCAATTTACCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS-3UTR CAA 90 bp | AGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGATGGGATCTGCTGGATTaGTTATCCCAAGAATCACTT | + |
Preference number: 5 (lower is better) Translates to: SPFPLIVRVWMCLVTCFRWDLLD*LSQESL Trigger: AAGTGATTCTTGGGATAACAAATCCAGCAGATCCCA...TCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS CAA 72 bp | ACCCCGTTGCAGACTGCTGGGGCAGCCGTGACTTCCTaGCAAGGCAGCCTCCGCCCTGGCACGATGCCTACG | + |
Preference number: 6 (lower is better) Translates to: TPLQTAGAAVTS*QGSLRPGTMPT Trigger: CGTAGGCATCGTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS TCA 72 bp | CATAAAGTACCCCGTTGCAGACTGCTGGGGCAGCCGTaGCTTCCTTGCAAGGCAGCCTCCGCCCTGGCACGA | + |
Preference number: 6 (lower is better) Translates to: HKVPRCRLLGQP*LPCKAASALAR Trigger: TCGTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS CCA 72 bp | AGACAAGATTCCATAAAGTACCCCGTTGCAGACTGCTaGGGCAGCCGTGACTTCCTTGCAAGGCAGCCTCCG | + |
Preference number: 6 (lower is better) Translates to: RQDSIKYPVADC*GSRDFLARQPP Trigger: CGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS GCA 72 bp | ATAAGACAAGATTCCATAAAGTACCCCGTTGCAGACTaGTGGGGCAGCCGTGACTTCCTTGCAAGGCAGCCT | + |
Preference number: 6 (lower is better) Translates to: IRQDSIKYPVAD*WGSRDFLARQP Trigger: AGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS TCA 72 bp | GCCCTGGCACGATGCCTACGCAGATCATGTTTTCTGTaGTGTCAAAGGCTTTATAGGCATTACGGCACTCAG | + |
Preference number: 6 (lower is better) Translates to: ALARCLRRSCFL*CQRLYRHYGTQ Trigger: CTGAGTGCCGTAATGCCTATAAAGCCTTTGACATCACAGAAAACATGATCTGCGTAGGCATCGTGCCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS CAA 90 bp | GGCCCAGGTAGACACGGAGCACATGGCATTCACAGACACGATGTGTaGAGGCAGTTTGACAGCTTTTGCGTAGTTACTATGTTTAATCCG | + |
Preference number: 6 (lower is better) Translates to: GPGRHGAHGIHRHDV*RQFDSFCVVTMFNP Trigger: CGGATTAAACATAGTAACTACGCAAAAGCTGTCAAACTGCCTCAACACATCGTGTCTGTGAATGCCATGTGCTCCGTGTCTACCTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS GCA 72 bp | CACTCAGCCTTAGAGATTACAGTGACATTCACGGTCTaGAGTGAGTCAGGGTCTTTGGTGACGTCACATAGA | + |
Preference number: 6 (lower is better) Translates to: HSALEITVTFTV*SESGSLVTSHR Trigger: TCTATGTGACGTCACCAAAGACCCTGACTCACTGCAGACCGTGAATGTCACTGTAATCTCTAAGGCTGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS CCA 72 bp | GTCAGACACCTCCACATCCCTTTCCATGGGATCTGCTaGATTTGTTATCCCAAGAATCACTTGAAGGTTCGG | + |
Preference number: 6 (lower is better) Translates to: VRHLHIPFHGIC*ICYPKNHLKVR Trigger: CCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGATGTGGAGGTGTCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS TCA 72 bp | ATGGGATCTGCTGGATTTGTTATCCCAAGAATCACTTaGAGGTTCGGTAAATTGCAGTGTGCAGCTGTGATC | + |
Preference number: 6 (lower is better) Translates to: MGSAGFVIPRIT*RFGKLQCAAVI Trigger: GATCACAGCTGCACACTGCAATTTACCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS GCA 72 bp | ATAGTCAGACACCTCCACATCCCTTTCCATGGGATCTaGTGGATTTGTTATCCCAAGAATCACTTGAAGGTT | + |
Preference number: 6 (lower is better) Translates to: IVRHLHIPFHGI*WICYPKNHLKV Trigger: AACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGATGTGGAGGTGTCTGACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |
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CDS CAA 72 bp | ACACCTCCACATCCCTTTCCATGGGATCTGCTGGATTaGTTATCCCAAGAATCACTTGAAGGTTCGGTAAAT | + |
Preference number: 6 (lower is better) Translates to: TPPHPFPWDLLD*LSQESLEGSVN Trigger: ATTTACCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGATGTGGAGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063523.5 |