RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS58 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000051936

Ensembl transcript IDs: ENSMUST00000063523.5

Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 72 bp ATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTaGCTTGTCACATGTTTCAGAATTCCTCCTGTTGTG +
Preference number: 3 (lower is better)
Translates to: MSPFPLIVRVWM*LVTCFRIPPVV
Trigger: CACAACAGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
3UTR CCA 72 bp GGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTaGATGTGCCTTGTCACATGTTTCAGAATTCCTCCT +
Preference number: 3 (lower is better)
Translates to: GLMSPFPLIVRV*MCLVTCFRIPP
Trigger: AGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR TCA 90 bp CACGGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCATTCACGGTCTGCAGTaGGTCAGGGTCTTTGGTGAC +
Preference number: 4 (lower is better)
Translates to: HGLMSPFPLIVRVWMCLVIHGLQ*VRVFGD
Trigger: GTCACCAAAGACCCTGACTCACTGCAGACCGTGAAT...GACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR GCA 90 bp CTCGCACGGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTGCAGGGTTGAAAGAATaGAGAGGAAGGCTAACTTCA +
Preference number: 4 (lower is better)
Translates to: LARSNEPISFNCEGVDVPAGLKE*RGRLTS
Trigger: TGAAGTTAGCCTTCCTCTGCATTCTTTCAACCCTGC...AGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACCGTGCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR TCA 90 bp CCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTGCAGTGTGCAGCTGTaGTCACCCACAAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: PISFNCEGVDVPCHMFQNCSVQL*SPTKDG
Trigger: TCCATCCTTTGTGGGTGATCACAGCTGCACACTGCA...ATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR GCA 90 bp GAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGCCTTTCCATGGGATCTaGTGGATTTGTTATCCCAAG +
Preference number: 4 (lower is better)
Translates to: EPISFNCEGVDVPCHMFQPFHGI*WICYPK
Trigger: CTTGGGATAACAAATCCAGCAGATCCCATGGAAAGG...CTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR CCA 90 bp GTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTCCTCCTGTTGTGGGATTCCATGGGATCTGCTaGATTTGTTATCCCAAGAAT +
Preference number: 4 (lower is better)
Translates to: VRVWMCLVTCFRIPPVVGFHGIC*ICYPKN
Trigger: ATTCTTGGGATAACAAATCCAGCAGATCCCATGGAA...TCCCACAACAGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR GCA 90 bp CCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTGGATCAGGACTCCAGTaGAGGGCAAGTAATCAGACT +
Preference number: 4 (lower is better)
Translates to: PFPLIVRVWMCLVTCFRIGSGLQ*RASNQT
Trigger: AGTCTGATTACTTGCCCTGCACTGGAGTCCTGATCC...AATTCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR CCA 90 bp ATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCGCCAGCTATGTGATCTaGATTATAGGCAAAGGTACG +
Preference number: 4 (lower is better)
Translates to: MSPFPLIVRVWMCLVTCFASYVI*IIGKGT
Trigger: CGTACCTTTGCCTATAATCCAGATCACATAGCTGGC...GAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS TCA 90 bp ACAAGATTCCATAAAGTACCCCGTTGCAGACTGCTGGGGCAGCCGTaGCTTCCTTGCAAGGCAGCCTCCGCCCTGGCACGATGCCTACGC +
Preference number: 5 (lower is better)
Translates to: TRFHKVPRCRLLGQP*LPCKAASALARCLR
Trigger: GCGTAGGCATCGTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS GCA 90 bp GCCATCTGCATAAGACAAGATTCCATAAAGTACCCCGTTGCAGACTaGTGGGGCAGCCGTGACTTCCTTGCAAGGCAGCCTCCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: AICIRQDSIKYPVAD*WGSRDFLARQPPPW
Trigger: CCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCTTATGCAGATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS CCA 90 bp ATCTGCATAAGACAAGATTCCATAAAGTACCCCGTTGCAGACTGCTaGGGCAGCCGTGACTTCCTTGCAAGGCAGCCTCCGCCCTGGCAC +
Preference number: 5 (lower is better)
Translates to: ICIRQDSIKYPVADC*GSRDFLARQPPPWH
Trigger: GTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCTTATGCAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR CAA 90 bp GCACGGTCTAATGAGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTGCAGCCGTGACTTCCTaGCAAGGCAGCCTCCGCCCT +
Preference number: 5 (lower is better)
Translates to: ARSNEPISFNCEGVDVPCAAVTS*QGSLRP
Trigger: AGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGC...ACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCTCATTAGACCGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS TCA 90 bp TCCCAAGAATCACTTGAAGGTTCGGTAAATTGCAGTGTGCAGCTGTaGTCACCCACAAAGGATGGATCAGGACTCCAGTGCAGGGCAAGT +
Preference number: 5 (lower is better)
Translates to: SQESLEGSVNCSVQL*SPTKDGSGLQCRAS
Trigger: ACTTGCCCTGCACTGGAGTCCTGATCCATCCTTTGTGGGTGATCACAGCTGCACACTGCAATTTACCGAACCTTCAAGTGATTCTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR CAA 90 bp GAGGGTGTGGATGTGCCTTGTCACATGTTTCAGAATTCCTCCTGTTGTGGGAGCATCCGTCTTTTCAGTTaGATTAACAGGAGGTCATGT +
Preference number: 5 (lower is better)
Translates to: EGVDVPCHMFQNSSCCGSIRLFS*INRRSC
Trigger: ACATGACCTCCTGTTAATCAAACTGAAAAGACGGAT...GCTCCCACAACAGGAGGAATTCTGAAACATGTGACAAGGCACATCCACACCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS TCA 90 bp TCCCTTTCCATGGGATCTGCTGGATTTGTTATCCCAAGAATCACTTaGAGGTTCGGTAAATTGCAGTGTGCAGCTGTGATCACCCACAAA +
Preference number: 5 (lower is better)
Translates to: SLSMGSAGFVIPRIT*RFGKLQCAAVITHK
Trigger: TTTGTGGGTGATCACAGCTGCACACTGCAATTTACCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS-3UTR CAA 90 bp AGCCCATTTCCTTTAATTGTGAGGGTGTGGATGTGCCTTGTCACATGTTTCAGATGGGATCTGCTGGATTaGTTATCCCAAGAATCACTT +
Preference number: 5 (lower is better)
Translates to: SPFPLIVRVWMCLVTCFRWDLLD*LSQESL
Trigger: AAGTGATTCTTGGGATAACAAATCCAGCAGATCCCA...TCTGAAACATGTGACAAGGCACATCCACACCCTCACAATTAAAGGAAATGGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS CAA 72 bp ACCCCGTTGCAGACTGCTGGGGCAGCCGTGACTTCCTaGCAAGGCAGCCTCCGCCCTGGCACGATGCCTACG +
Preference number: 6 (lower is better)
Translates to: TPLQTAGAAVTS*QGSLRPGTMPT
Trigger: CGTAGGCATCGTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS TCA 72 bp CATAAAGTACCCCGTTGCAGACTGCTGGGGCAGCCGTaGCTTCCTTGCAAGGCAGCCTCCGCCCTGGCACGA +
Preference number: 6 (lower is better)
Translates to: HKVPRCRLLGQP*LPCKAASALAR
Trigger: TCGTGCCAGGGCGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS CCA 72 bp AGACAAGATTCCATAAAGTACCCCGTTGCAGACTGCTaGGGCAGCCGTGACTTCCTTGCAAGGCAGCCTCCG +
Preference number: 6 (lower is better)
Translates to: RQDSIKYPVADC*GSRDFLARQPP
Trigger: CGGAGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS GCA 72 bp ATAAGACAAGATTCCATAAAGTACCCCGTTGCAGACTaGTGGGGCAGCCGTGACTTCCTTGCAAGGCAGCCT +
Preference number: 6 (lower is better)
Translates to: IRQDSIKYPVAD*WGSRDFLARQP
Trigger: AGGCTGCCTTGCAAGGAAGTCACGGCTGCCCCAGCAGTCTGCAACGGGGTACTTTATGGAATCTTGTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS TCA 72 bp GCCCTGGCACGATGCCTACGCAGATCATGTTTTCTGTaGTGTCAAAGGCTTTATAGGCATTACGGCACTCAG +
Preference number: 6 (lower is better)
Translates to: ALARCLRRSCFL*CQRLYRHYGTQ
Trigger: CTGAGTGCCGTAATGCCTATAAAGCCTTTGACATCACAGAAAACATGATCTGCGTAGGCATCGTGCCAGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS CAA 90 bp GGCCCAGGTAGACACGGAGCACATGGCATTCACAGACACGATGTGTaGAGGCAGTTTGACAGCTTTTGCGTAGTTACTATGTTTAATCCG +
Preference number: 6 (lower is better)
Translates to: GPGRHGAHGIHRHDV*RQFDSFCVVTMFNP
Trigger: CGGATTAAACATAGTAACTACGCAAAAGCTGTCAAACTGCCTCAACACATCGTGTCTGTGAATGCCATGTGCTCCGTGTCTACCTGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS GCA 72 bp CACTCAGCCTTAGAGATTACAGTGACATTCACGGTCTaGAGTGAGTCAGGGTCTTTGGTGACGTCACATAGA +
Preference number: 6 (lower is better)
Translates to: HSALEITVTFTV*SESGSLVTSHR
Trigger: TCTATGTGACGTCACCAAAGACCCTGACTCACTGCAGACCGTGAATGTCACTGTAATCTCTAAGGCTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS CCA 72 bp GTCAGACACCTCCACATCCCTTTCCATGGGATCTGCTaGATTTGTTATCCCAAGAATCACTTGAAGGTTCGG +
Preference number: 6 (lower is better)
Translates to: VRHLHIPFHGIC*ICYPKNHLKVR
Trigger: CCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGATGTGGAGGTGTCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS TCA 72 bp ATGGGATCTGCTGGATTTGTTATCCCAAGAATCACTTaGAGGTTCGGTAAATTGCAGTGTGCAGCTGTGATC +
Preference number: 6 (lower is better)
Translates to: MGSAGFVIPRIT*RFGKLQCAAVI
Trigger: GATCACAGCTGCACACTGCAATTTACCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS GCA 72 bp ATAGTCAGACACCTCCACATCCCTTTCCATGGGATCTaGTGGATTTGTTATCCCAAGAATCACTTGAAGGTT +
Preference number: 6 (lower is better)
Translates to: IVRHLHIPFHGI*WICYPKNHLKV
Trigger: AACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGATGTGGAGGTGTCTGACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5
CDS CAA 72 bp ACACCTCCACATCCCTTTCCATGGGATCTGCTGGATTaGTTATCCCAAGAATCACTTGAAGGTTCGGTAAAT +
Preference number: 6 (lower is better)
Translates to: TPPHPFPWDLLD*LSQESLEGSVN
Trigger: ATTTACCGAACCTTCAAGTGATTCTTGGGATAACAAATCCAGCAGATCCCATGGAAAGGGATGTGGAGGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000063523.5