Pregenerated sensors for PRSS57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020323Ensembl transcript IDs: ENSMUST00000020573.13, ENSMUST00000167987.2, ENSMUST00000169684.2, ENSMUST00000171681.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTCCCCACCTaGTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: GMAAAWRSPCYDLPT*FLGWSCRRAQPMSW Trigger: CCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCAGGTGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CCA 90 bp | GTGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTGAGTGGGTaGGAGGGAAAGGAAGTGCACCCTCTGGGGTCCCAGAGGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: VARVQESLGSLELSG*EGKEVHPLGSQRYR Trigger: CCTGTACCTCTGGGACCCCAGAGGGTGCACTTCCTTTCCCTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR TCA 90 bp | AGAGACACGTGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTaGGTGGGTGGGAGGGAAAGGAAGTGCACCCTCTGGGGTCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: RDTWHVFKNPWEAWS*VGGRERKCTLWGPR Trigger: TCTGGGACCCCAGAGGGTGCACTTCCTTTCCCTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCACGTGTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR TCA 90 bp | CAGCTGCAGGTGGTGACACCAGCCAGATGCTGTTTGGGGCCAGACTaGATTACTGCCTTCACTCTGACAGCTGCTGCTGCAACTTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: QLQVVTPARCCLGPD*ITAFTLTAAAATCP Trigger: TGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCATCTGGCTGGTGTCACCACCTGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR GCA 90 bp | GGTGGTGACACCAGCCAGATGCTGTTTGGGGCCAGACTGAATTACTaGCTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACA | + |
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Preference number: 1 (lower is better) Translates to: GGDTSQMLFGARLNY*LHSDSCCCNLPTPT Trigger: TGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCATCTGGCTGGTGTCACCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR GCA 90 bp | CATCACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTaGCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTC | + |
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Preference number: 1 (lower is better) Translates to: HHPGTGIKVRTQDPC*PGMAAAWRSPCYDL Trigger: GAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGGGTGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR GCA 90 bp | TGCCATCACCCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTaGTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGAT | + |
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Preference number: 1 (lower is better) Translates to: CHHPGTGIKVRTQDP*CPGMAAAWRSPCYD Trigger: ATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGGGTGATGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR TCA 90 bp | CAGCCAGATGCTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTaGCAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: QPDAVWGQTELLPSL*QLLLQLAHTHKCLQ Trigger: TTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCATCTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR GCA 90 bp | ATGCTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTGACAGCTaGTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: MLFGARLNYCLHSDS*CCNLPTPTSAFKEA Trigger: GGCTTCCTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR GCA 90 bp | CTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTGACAGCTGCTaGTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAAGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: LFGARLNYCLHSDSC*CNLPTPTSAFKEAK Trigger: TTTGGCTTCCTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CCA 90 bp | AATTTATGTCACATGGACATTTCCCAAACCTGGCCTGGAACCACTTaGGGATCCCCCTGGGATCCTGAGCACGTATCACAAGGACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: NLCHMDISQTWPGTT*GSPWDPEHVSQGLK Trigger: CTTCAGTCCTTGTGATACGTGCTCAGGATCCCAGGGGGATCCCCAAGTGGTTCCAGGCCAGGTTTGGGAAATGTCCATGTGACATAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CCA 90 bp | GGAGGAATGATAGACGATAAGACAACTGTTATACTGAGGCTAGGATaGCAAGAGTGGAGTTATAACTGTTTGGATTTTTGTCCTCACTAC | + |
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Preference number: 1 (lower is better) Translates to: GGMIDDKTTVILRLG*QEWSYNCLDFCPHY Trigger: GTAGTGAGGACAAAAATCCAAACAGTTATAACTCCACTCTTGCCATCCTAGCCTCAGTATAACAGTTGTCTTATCGTCTATCATTCCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CCA 90 bp | ATAGACGATAAGACAACTGTTATACTGAGGCTAGGATGGCAAGAGTaGAGTTATAACTGTTTGGATTTTTGTCCTCACTACATATATCAG | + |
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Preference number: 1 (lower is better) Translates to: IDDKTTVILRLGWQE*SYNCLDFCPHYIYQ Trigger: CTGATATATGTAGTGAGGACAAAAATCCAAACAGTTATAACTCCACTCTTGCCATCCTAGCCTCAGTATAACAGTTGTCTTATCGTCTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTCCCCATTGGAGCTGAGTGGGTaGGAGGGAAAGGAAGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PAAQGWQLHGDPPAMISPLELSG*EGKEVH Trigger: GTGCACTTCCTTTCCCTCCCACCCACTCAGCTCCAA...TGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CAA 90 bp | CACCTGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTaGGTGTTTGCATATGGCTGGCCTCAGACCAGAGCGGGCAACATC | + |
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Preference number: 2 (lower is better) Translates to: HLLSRLELSQGTADE*VFAYGWPQTRAGNI Trigger: GATGTTGCCCGCTCTGGTCTGAGGCCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCAGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCAGCTGCTGCTGCAACTTaGCCACACCCACAAGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: DSQAQDSQWTLGFTVPRAAAAAT*PHPQVP Trigger: AGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGC...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTCCCCACACAACAGAAGACTATaGGAAGGTGCCCAACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PAAQGWQLHGDPPAMISPHNRRL*EGAQPS Trigger: GGAGGGTTGGGCACCTTCCCATAGTCTTCTGTTGTG...TGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CAA 90 bp | AGCTTTCAGAGACACGTGGCACGTGTTCAAGAATCCCTGGGAAGCTaGGAGCTGAGTGGGTGGGAGGGAAAGGAAGTGCACCCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: SFQRHVARVQESLGS*ELSGWEGKEVHPLG Trigger: CCCCAGAGGGTGCACTTCCTTTCCCTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCACGTGTCTCTGAAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR TCA 90 bp | CACGTGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTGAGTGGGTGGGAGTCTGGGGCTCCCGAGTaGAGGGTTCAACTCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: HVARVQESLGSLELSGWESGAPE*RVQLKP Trigger: TGGTTTGAGTTGAACCCTTCACTCGGGAGCCCCAGA...CTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCACGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATGGGAGGGAAAGGAAGTaGACCCTCTGGGGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: CFLGWSCRRAQPMSWCLHGRERK*TLWGPR Trigger: TCTGGGACCCCAGAGGGTGCACTTCCTTTCCCTCCC...ATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | TGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACCCAGATGTGAGCCAGTaGGCACAGGTTGCTATTCAT | + |
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Preference number: 2 (lower is better) Translates to: CHPEATSSGGGSIVGLGYPDVSQ*AQVAIH Trigger: ATGAATAGCAACCTGTGCCCACTGGCTCACATCTGG...GTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | TCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCCCACCGTGTATTTTCTaGCTCCTTCCTTTGAACCTG | + |
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Preference number: 2 (lower is better) Translates to: SQAQDSQWTLGFTVPRAPPPCIF*LLPLNL Trigger: CAGGTTCAAAGGAAGGAGGCAGAAAATACACGGTGG...GGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATGCCCACACCCACAAGTaGCTTCAAGGAAGCCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: CFLGWSCRRAQPMSWCLHAHTHK*LQGSQK Trigger: CTTTTGGCTTCCTTGAAGGCACTTGTGGGTGTGGGC...ATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR TCA 90 bp | AATTACTGCCTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTTCTGGGGCTCCCGAGTaGAGGGTTCAACTCAAACCA | + |
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Preference number: 2 (lower is better) Translates to: NYCLHSDSCCCNLPTPTSSGAPE*RVQLKP Trigger: TGGTTTGAGTTGAACCCTTCACTCGGGAGCCCCAGA...ACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCTACCCTGGAGTTCTaGCTCACCAAGGAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: DSQAQDSQWTLGFTVPRAPTLEF*LTKEIK Trigger: TTTTATTTCCTTGGTGAGGCAGAACTCCAGGGTAGG...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGCCAGATGTGAGCCAGTaGGCACAGGTTGCTATTCAT | + |
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Preference number: 2 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKPDVSQ*AQVAIH Trigger: ATGAATAGCAACCTGTGCCCACTGGCTCACATCTGG...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGCCAAGTCTCAAGCCATaGAATATTCCAGATGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: HPEATSSGGGSIVGLGYKPSLKP*NIPDVS Trigger: GCTCACATCTGGAATATTCCATGGCTTGAGACTTGG...CTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGCATAAACAGACATGTTaGCTCAGGCCCCTCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKHKQTC*LRPLIP Trigger: TGGGATGAGGGGCCTGAGCCAACATGTCTGTTTATG...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCAATACTGAGGCTAGGATaGCAAGAGTGGAGTTATAAC | + |
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Preference number: 2 (lower is better) Translates to: DSQAQDSQWTLGFTVPRAILRLG*QEWSYN Trigger: GTTATAACTCCACTCTTGCCATCCTAGCCTCAGTAT...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | AATTACTGCCTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTCACAACAGAAGACTATaGGAAGGTGCCCAACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: NYCLHSDSCCCNLPTPTSHNRRL*EGAQPS Trigger: GGAGGGTTGGGCACCTTCCCATAGTCTTCTGTTGTG...ACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACATTGTTCATTTAGGATaGATGCCTGTAGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: EATSSGGGSIVGLGYKGDIVHLG*MPVAQV Trigger: GACTTGGGCTACAGGCATTCATCCTAAATGAACAAT...GTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCACTCTAGCACCCACTGCCCTGTACCCTGCACACCCACATTAGTTTTTACGCATAAACAGACATGTTaGCTCAGGCCCCTCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: SHSSTHCPVPCTPTLVFTHKQTC*LRPLIP Trigger: TGGGATGAGGGGCCTGAGCCAACATGTCTGTTTATG...CGTAAAAACTAATGTGGGTGTGCAGGGTACAGGGCAGTGGGTGCTAGAGTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTCCTACCCTGGAGTTCTaGCTCACCAAGGAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: LRPERATSGQRNTGLIPVPTLEF*LTKEIK Trigger: TTTTATTTCCTTGGTGAGGCAGAACTCCAGGGTAGG...AACAGGAATGAGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCTCTGGTCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTCCAAGTCTCAAGCCATaGAATATTCCAGATGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRPERATSGQRNTGLIPVPSLKP*NIPDVS Trigger: GCTCACATCTGGAATATTCCATGGCTTGAGACTTGG...AACAGGAATGAGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCTCTGGTCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGGGGCAAGGAGTTCCCAGGGTCTTTCTCACCACCCTCCAGTTCTCAGCTGGAGTTATAACTGTTTaGATTTTTGTCCTCACTACA | + |
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Preference number: 2 (lower is better) Translates to: VWGQGVPRVFLTTLQFSAGVITV*IFVLTT Trigger: TGTAGTGAGGACAAAAATCCAAACAGTTATAACTCC...AGCTGAGAACTGGAGGGTGGTGAGAAAGACCCTGGGAACTCCTTGCCCCCAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGAACATTGGACCCTGGCTaGCTCACAGGCCCAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: IFIIVGMCHHPGTGIKVRTLDPG*LTGPGQ Trigger: CTGTCCTGGGCCTGTGAGTCAGCCAGGGTCCAATGT...TCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGGAGTTATAACTGTTTaGATTTTTGTCCTCACTACA | + |
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Preference number: 2 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKGVITV*IFVLTT Trigger: TGTAGTGAGGACAAAAATCCAAACAGTTATAACTCC...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTCCTCACTACATATATCAGTCCCTGTCTGTGTTAATGGAGTTTGTCACGCCAGATGTGAGCCAGTaGGCACAGGTTGCTATTCAT | + |
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Preference number: 2 (lower is better) Translates to: FCPHYIYQSLSVLMEFVTPDVSQ*AQVAIH Trigger: ATGAATAGCAACCTGTGCCCACTGGCTCACATCTGG...CGTGACAAACTCCATTAACACAGACAGGGACTGATATATGTAGTGAGGACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGACTTCACTCTGACAGCTaGTGCTGCAACTTGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: IFIIVGMCHHPGTGIKVRLHSDS*CCNLPT Trigger: TGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG...TCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR TCA 90 bp | TTTTGTCCTCACTACATATATCAGTCCCTGTCTGTGTTAATGGAGTTTGTCACGATTGTTCATTTAGGATaGATGCCTGTAGCCCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: FCPHYIYQSLSVLMEFVTIVHLG*MPVAQV Trigger: GACTTGGGCTACAGGCATTCATCCTAAATGAACAAT...CGTGACAAACTCCATTAACACAGACAGGGACTGATATATGTAGTGAGGACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
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| 3UTR TCA 72 bp | CCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATaGTCTCCCCACCTGCTTTCTAGGCTGGAGCTGTCG | + |
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Preference number: 3 (lower is better) Translates to: PRDGSCMEIPLL*SPHLLSRLELS Trigger: CGACAGCTCCAGCCTAGAAAGCAGGTGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR CCA 72 bp | TGGACCCTGGCTGACTCACAGGCCCAGGACAGCCAGTaGACACTAGGATTCACTGTGCCCAGAGCACCCAGA | + |
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Preference number: 3 (lower is better) Translates to: WTLADSQAQDSQ*TLGFTVPRAPR Trigger: TCTGGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTCAGCCAGGGTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACGCCAGTGGGCACAGGTaGCTATTCATGTCTGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: CHPEATSSGGGSIVGLGYASGHR*LFMSAP Trigger: TGGGGCAGACATGAATAGCAACCTGTGCCCACTGGC...GTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
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| 3UTR GCA 72 bp | GGTACTGGGATCAAAGTTAGAACCCAAGACCCCTGCTaGCCAGGGATGGCAGCTGCATGGAGATCCCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GTGIKVRTQDPC*PGMAAAWRSPC Trigger: GCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR GCA 72 bp | CCAGGTACTGGGATCAAAGTTAGAACCCAAGACCCCTaGTGCCCAGGGATGGCAGCTGCATGGAGATCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PGTGIKVRTQDP*CPGMAAAWRSP Trigger: GGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGGGGTCTTGGGTTCTAACTTTGATCCCAGTACCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR CCA 72 bp | TCCCCCTGCTATGATCTCCCCACCTGCTTTCTAGGCTaGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: SPCYDLPTCFLG*SCRRAQPMSWC Trigger: ACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCAGGTGGGGAGATCATAGCAGGGGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR TCA 72 bp | TGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTaGGTGGGTGGGAGGGAAAGGAAGTGCACCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WHVFKNPWEAWS*VGGRERKCTLW Trigger: CCAGAGGGTGCACTTCCTTTCCCTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATGCCAGTGGGCACAGGTaGCTATTCATGTCTGCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: CFLGWSCRRAQPMSWCLHASGHR*LFMSAP Trigger: TGGGGCAGACATGAATAGCAACCTGTGCCCACTGGC...ATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR-3UTR CAA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCATTCTGCCTCCTTCCTTaGAACCTGGGACTAGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: DSQAQDSQWTLGFTVPRAFCLLP*NLGLEW Trigger: CCATTCTAGTCCCAGGTTCAAAGGAAGGAGGCAGAA...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR TCA 72 bp | GCTGTTTGGGGCCAGACTGAATTACTGCCTTCACTCTaGCAGCTGCTGCTGCAACTTGCCCACACCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: AVWGQTELLPSL*QLLLQLAHTHK Trigger: CTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR TCA 72 bp | GTGGTGACACCAGCCAGATGCTGTTTGGGGCCAGACTaGATTACTGCCTTCACTCTGACAGCTGCTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: VVTPARCCLGPD*ITAFTLTAAAA Trigger: TGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCATCTGGCTGGTGTCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR GCA 72 bp | ACCAGCCAGATGCTGTTTGGGGCCAGACTGAATTACTaGCTTCACTCTGACAGCTGCTGCTGCAACTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSQMLFGARLNY*LHSDSCCCNLP Trigger: GGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAATTCAGTCTGGCCCCAAACAGCATCTGGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR GCA 72 bp | ACCCAGAGTCACTCTAGCACCCACTGCCCTGTACCCTaGACACCCACATTAGTTTTTACGCAGTTCCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: TQSHSSTHCPVP*TPTLVFTQFPT Trigger: GGTGGGGAACTGCGTAAAAACTAATGTGGGTGTGCAGGGTACAGGGCAGTGGGTGCTAGAGTGACTCTGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR TCA 72 bp | AGGGCCTTAAATGGCACCTTGTCTGGGGCTCCCGAGTaGAGGGTTCAACTCAAACCAGGAGGAATGATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RALNGTLSGAPE*RVQLKPGGMID Trigger: GTCTATCATTCCTCCTGGTTTGAGTTGAACCCTTCACTCGGGAGCCCCAGACAAGGTGCCATTTAAGGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR GCA 72 bp | GATGTGAGCCAGTGGGCACAGGTTGCTATTCATGTCTaGCCCAGTAGAGGGCTGAAATTCAAACAGCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DVSQWAQVAIHV*PSRGLKFKQPS Trigger: TGAGGGCTGTTTGAATTTCAGCCCTCTACTGGGGCAGACATGAATAGCAACCTGTGCCCACTGGCTCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167987.2 |
||
| 3UTR TCA 72 bp | GTAGCCCAAGTCTCAAGCCATGGAATATTCCAGATGTaGGCCAGTGGGCACAGGTTGCTATTCATGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VAQVSSHGIFQM*ASGHRLLFMSA Trigger: GGCAGACATGAATAGCAACCTGTGCCCACTGGCTCACATCTGGAATATTCCATGGCTTGAGACTTGGGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 ENSMUST00000171681.2 |
||
| 3UTR GCA 72 bp | ATTACTGCCTTCACTCTGACAGCTGCTGCTGCAACTTaGCCACACCCACAAGTGCCTTCAAGGAAGCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ITAFTLTAAAAT*PHPQVPSRKPK Trigger: TTTTGGCTTCCTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAGGCAGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR GCA 72 bp | CCAGGGTCTTTCTCACCACCCTCCAGTTCTCAGCTGTaGCTTTCTTGTAATATCCCCAAAAGTGTCCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGSFSPPSSSQL*LSCNIPKSVLS Trigger: GCTAAGGACACTTTTGGGGATATTACAAGAAAGGCACAGCTGAGAACTGGAGGGTGGTGAGAAAGACCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAAGCCAAAAGGGTGGAGTTATAACTGTTaGGATTTTTGTCCTCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: AAAATCPHPQVPSRKPKGWSYNC*DFCPHY Trigger: GTAGTGAGGACAAAAATCCAAACAGTTATAACTCCA...CCCTTTTGGCTTCCTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR CCA 72 bp | TATTCTAATTTATGTCACATGGACATTTCCCAAACCTaGCCTGGAACCACTTGGGGATCCCCCTGGGATCCT | + |
|
Preference number: 3 (lower is better) Translates to: YSNLCHMDISQT*PGTTWGSPWDP Trigger: AGGATCCCAGGGGGATCCCCAAGTGGTTCCAGGCCAGGTTTGGGAAATGTCCATGTGACATAAATTAGAATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTTGGAGTTATAACTGTTaGGATTTTTGTCCTCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: LRPERATSGQRNTGLIPVWSYNC*DFCPHY Trigger: GTAGTGAGGACAAAAATCCAAACAGTTATAACTCCA...AACAGGAATGAGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCTCTGGTCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR TCA 72 bp | GATCCCCCTGGGATCCTGAGCACGTATCACAAGGACTaGAGGGAGATTTTTATAATAGTTGGTATGTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: DPPGILSTYHKD*REIFIIVGMCH Trigger: ATGGCACATACCAACTATTATAAAAATCTCCCTTCAGTCCTTGTGATACGTGCTCAGGATCCCAGGGGGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR CCA 72 bp | GTATCACAAGGACTGAAGGGAGATTTTTATAATAGTTaGTATGTGCCATCACCCAGGTACTGGGATCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VSQGLKGDFYNS*YVPSPRYWDQS Trigger: ACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAATCTCCCTTCAGTCCTTGTGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CCTGCTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTCCCCAGGGGCGAGCAGTGCGTaGGCCCCCAGCACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PAAQGWQLHGDPPAMISPGASSA*APSTTS Trigger: GCTGGTGGTGCTGGGGGCCCACGCACTGCTCGCCCC...TGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | CACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGCTCTGGGGCGAGCAGTaGGTGGGCCCCCAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPEATSSGGGSIVGLGYKLWGEQ*VGPQHH Trigger: GTGGTGCTGGGGGCCCACGCACTGCTCGCCCCAGAG...CTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTGGGGCGAGCAGTGCGTaGGCCCCCAGCACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRPERATSGQRNTGLIPVGASSA*APSTTS Trigger: GCTGGTGGTGCTGGGGGCCCACGCACTGCTCGCCCC...AACAGGAATGAGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCTCTGGTCTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | GAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACCTGCTGTGTGGGCTCTaGGGCGAGCAGTGCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EATSSGGGSIVGLGYKGDLLCGL*GEQCVG Trigger: GCCCACGCACTGCTCGCCCCAGAGCCCACACAGCAG...GTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | AGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGGAACCAGGGAGCCACATaGGCTGGGTCAGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLELSQGTADELVFAYGWNQGAT*AGSGQL Trigger: CAGCTGCCCTGACCCAGCTCATGTGGCTCCCTGGTT...CCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTCCCCAAGGGGTCCCTGTCACTaGAGCAATGGGCAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PAAQGWQLHGDPPAMISPRGPCH*SNGQLT Trigger: TGTCAGCTGCCCATTGCTTCAGTGACAGGGACCCCT...TGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGTGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGTCAGCACCAGACAGTaGCAGCCTCCTCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRCHPEATSSGGGSIVGLVSTRQ*QPPLVP Trigger: TGGGACAAGAGGAGGCTGGCACTGTCTGGTGCTGAC...AAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCACCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACTGTGGATTAAGGCTCTGGGGCGAGCAGTaGGTGGGCCCCCAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGGGSIVGLGYKGDCGLRLWGEQ*VGPQHH Trigger: GTGGTGCTGGGGGCCCACGCACTGCTCGCCCCAGAG...CCTTAATCCACAGTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | AGGTGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTATGGCAGGATTCAGCTaGCCCTGCCAGGAGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCHPEATSSGGGSIVGLGMAGFS*PCQELL Trigger: CAACAGCTCCTGGCAGGGCCAGCTGAATCCTGCCAT...ACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTGGTCCCCACTGTGAGTaGAGAGCATGGCAGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RCHPEATSSGGGSIVGLGGPHCE*RAWQDS Trigger: TGAATCCTGCCATGCTCTGCACTCACAGTGGGGACC...ACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| 3UTR CAA 72 bp | TGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTaGCATATGGCTGGCCTCAGACCAGAGCGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WSCRRAQPMSWC*HMAGLRPERAT Trigger: TGTTGCCCGCTCTGGTCTGAGGCCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | CACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGAGGGGTCCCTGTCACTaGAGCAATGGGCAGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HPEATSSGGGSIVGLGYKRGPCH*SNGQLT Trigger: TGTCAGCTGCCCATTGCTTCAGTGACAGGGACCCCT...CTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | AGGTGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTCCTGCCAGGAGCTGTTaGAGACACTCAGATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RCHPEATSSGGGSIVGLGPARSC*RHSDPV Trigger: TACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGG...ACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | CACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGATTCAGCTGGCCCTaGCAGGAGCTGTTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HPEATSSGGGSIVGLGYKGFSWP*QELLQT Trigger: TGTCTGCAACAGCTCCTGGCAGGGCCAGCTGAATCC...CTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCAGGATTCAGCTGGCCCTaGCAGGAGCTGTTGCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: DSQAQDSQWTLGFTVPRAGFSWP*QELLQT Trigger: TGTCTGCAACAGCTCCTGGCAGGGCCAGCTGAATCC...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | TGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACGCCTGTGTGGCAGGCTaGAAATCAGGATGGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: CHPEATSSGGGSIVGLGYACVAG*KSGWLT Trigger: TGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGC...GTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | AGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGGGCAGGCAGATATCGTTaGCCTGTGTGGCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLELSQGTADELVFAYGWAGRYR*PVWQAG Trigger: TCCAGCCTGCCACACAGGCCAACGATATCTGCCTGC...CCAGCCATATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | TCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCGGCTGGAAATCAGGATaGCTGACAGCAGCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SQAQDSQWTLGFTVPRAPGWKSG*LTAAAM Trigger: CATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCC...GGGTGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CACGTGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTGAGTGGGTGGGAGGCCTGTGTGGCAGGCTaGAAATCAGGATGGCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HVARVQESLGSLELSGWEACVAG*KSGWLT Trigger: TGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGC...CTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CACGTGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTGAGTGGGTGGGAGTGTGAGTGCAGAGCATaGCAGGATTCAGCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HVARVQESLGSLELSGWECECRA*QDSAGP Trigger: AGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACA...CTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCACGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGTCAGCACCAGACAGTaGCAGCCTCCTCTTGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKVSTRQ*QPPLVP Trigger: TGGGACAAGAGGAGGCTGGCACTGTCTGGTGCTGAC...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACGCAATGCTAAATGTCTaGTGTGTGGGCTCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EATSSGGGSIVGLGYKGDAMLNV*CVGSGA Trigger: CGCCCCAGAGCCCACACAGCAGACATTTAGCATTGC...GTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCTGCCCAGGGATGGCAGCTGCATGGAGATCCCCCTGCTATGATCTCCCCAATGGCTGACAGCAGCTaGAATGCTAAATGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAAQGWQLHGDPPAMISPMADSS*NAKCLL Trigger: CAGCAGACATTTAGCATTGCAGCTGCTGTCAGCCAT...TGGGGAGATCATAGCAGGGGGATCTCCATGCAGCTGCCATCCCTGGGCAGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CACGTGGCACGTGTTCAAGAATCCCTGGGAAGCTTGGAGCTGAGTGGGTGGGAGGGCTGGAAATCAGGATaGCTGACAGCAGCTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: HVARVQESLGSLELSGWEGWKSG*LTAAAM Trigger: CATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCC...CTCCCACCCACTCAGCTCCAAGCTTCCCAGGGATTCTTGAACACGTGCCACGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCAGGATTCAGCTaGCCCTGCCAGGAGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CFLGWSCRRAQPMSWCLHMAGFS*PCQELL Trigger: CAACAGCTCCTGGCAGGGCCAGCTGAATCCTGCCAT...ATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGATGGCAGGATTCAGCTaGCCCTGCCAGGAGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKMAGFS*PCQELL Trigger: CAACAGCTCCTGGCAGGGCCAGCTGAATCCTGCCAT...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACCCTGCCAGGAGCTGTTaGAGACACTCAGATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: EATSSGGGSIVGLGYKGDPARSC*RHSDPV Trigger: TACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGG...GTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACTGTGGATTAAGGGCAGGCAGATATCGTTaGCCTGTGTGGCAGGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGGGSIVGLGYKGDCGLRAGRYR*PVWQAG Trigger: TCCAGCCTGCCACACAGGCCAACGATATCTGCCTGC...CCTTAATCCACAGTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGTGTTCACCGAGCCCGGGCTCCATCCCCAGCACCGCATAAACAGACATGTACCACACCAGAGGCCTaGGAAAGATACAAGACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSVHRARAPSPAPHKQTCTTPEA*ERYKTM Trigger: CATGGTCTTGTATCTTTCTCAGGCCTCTGGTGTGGT...ACATGTCTGTTTATGCGGTGCTGGGGATGGAGCCCGGGCTCGGTGAACACTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGCCTGCCAGGAGCTGTTaGAGACACTCAGATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKPARSC*RHSDPV Trigger: TACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGG...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACTGTGGATTAAGGGGTCCCCACTGTGAGTaGAGAGCATGGCAGGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGGGSIVGLGYKGDCGLRGPHCE*RAWQDS Trigger: TGAATCCTGCCATGCTCTGCACTCACAGTGGGGACC...CCTTAATCCACAGTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTTGTGAGTGCAGAGCATaGCAGGATTCAGCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPERATSGQRNTGLIPVCECRA*QDSAGP Trigger: AGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACA...AACAGGAATGAGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCTCTGGTCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | CTTCACTCTGACAGCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGTATCGTTGGCCTGTGTaGCAGGCTGGAAATCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LHSDSCCCNLPTPTSAFKYRWPV*QAGNQD Trigger: ATCCTGATTTCCAGCCTGCCACACAGGCCAACGATA...CTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGCTGTCAGAGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | CTCAGACCAGAGCGGGCAACATCAGGTCAGAGAAACACTGGGCTCATTCCTGTTCCAGGTCACAAACGCTaGCACTTGAGTGTAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LRPERATSGQRNTGLIPVPGHKR*HLSVDI Trigger: GATGTCTACACTCAAGTGTCAGCGTTTGTGACCTGG...AACAGGAATGAGCCCAGTGTTTCTCTGACCTGATGTTGCCCGCTCTGGTCTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR GCA 90 bp | TGCTTTCTAGGCTGGAGCTGTCGCAGGGCACAGCCGATGAGTTGGTGTTTGCATATGGCTGACAGCAGCTaGAATGCTAAATGTCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFLGWSCRRAQPMSWCLHMADSS*NAKCLL Trigger: CAGCAGACATTTAGCATTGCAGCTGCTGTCAGCCAT...ATGCAAACACCAACTCATCGGCTGTGCCCTGCGACAGCTCCAGCCTAGAAAGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | GTTGCTATTCATGTCTGCCCCAGTAGAGGGCTGAAATTCAAACAGCCCTCACAGTGTGAGTGCAGAGCATaGCAGGATTCAGCTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VAIHVCPSRGLKFKQPSQCECRA*QDSAGP Trigger: AGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACA...CTGTGAGGGCTGTTTGAATTTCAGCCCTCTACTGGGGCAGACATGAATAGCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167987.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGACGGCGGTCCCCACTGTaGGTGCAGAGCATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IFIIVGMCHHPGTGIKVRRRSPL*VQSMAG Trigger: TCCTGCCATGCTCTGCACTCACAGTGGGGACCGCCG...TCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGAAACCAGGGAGCCACATaGGCTGGGTCAGGGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFIIVGMCHHPGTGIKVRNQGAT*AGSGQL Trigger: CAGCTGCCCTGACCCAGCTCATGTGGCTCCCTGGTT...TCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCCTCACTACATATATCAGTCCCTGTCTGTGTTAATGGAGTTTGTCACGCTGTCACTGAAGCAATaGGCAGCTGACACCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FCPHYIYQSLSVLMEFVTLSLKQ*AADTTQ Trigger: TTGGGTGGTGTCAGCTGCCCATTGCTTCAGTGACAG...CGTGACAAACTCCATTAACACAGACAGGGACTGATATATGTAGTGAGGACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGACTGTCACTGAAGCAATaGGCAGCTGACACCACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: IFIIVGMCHHPGTGIKVRLSLKQ*AADTTQ Trigger: TTGGGTGGTGTCAGCTGCCCATTGCTTCAGTGACAG...TCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| 3UTR CAA 72 bp | CTGAGGCTAGGATGGCAAGAGTGGAGTTATAACTGTTaGGATTTTTGTCCTCACTACATATATCAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLGWQEWSYNC*DFCPHYIYQSL Trigger: CAGGGACTGATATATGTAGTGAGGACAAAAATCCAAACAGTTATAACTCCACTCTTGCCATCCTAGCCTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTTATAATAGTTGGTATGTGCCATCACCCAGGTACTGGGATCAAAGTTAGACCAGGTCACAAACGCTaGCACTTGAGTGTAGACATC | + |
|
Preference number: 4 (lower is better) Translates to: IFIIVGMCHHPGTGIKVRPGHKR*HLSVDI Trigger: GATGTCTACACTCAAGTGTCAGCGTTTGTGACCTGG...TCTAACTTTGATCCCAGTACCTGGGTGATGGCACATACCAACTATTATAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS TCA 90 bp | ACACCAGAGGCCGAGCAGAAACCACGCCGCCGGCGGTCCCCACTGTaGGTGCAGAGCATGGCAGGATTCAGCTGGCCCTGCCAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPEAEQKPRRRRSPL*VQSMAGFSWPCQEL Trigger: CAGCTCCTGGCAGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACAGTGGGGACCGCCGGCGGCGTGGTTTCTGCTCGGCCTCTGGTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167987.2 |
||
| CDS TCA 90 bp | CCAGAATCTGCCGAGCAGAAACCACGCCGCCGGCGGTCCCCACTGTaGGTGCAGAGCATGGCAGGATTCAGCTGGCCCTGCCAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PESAEQKPRRRRSPL*VQSMAGFSWPCQEL Trigger: CAGCTCCTGGCAGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACAGTGGGGACCGCCGGCGGCGTGGTTTCTGCTCGGCAGATTCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 90 bp | AAGACCATGGGCCCGTCTTCCACAGACCAAGGGTCCCCCAGAATCTaGCGAGCAGAAACCACGCCGCCGGCGGTCCCCACTGTGAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KTMGPSSTDQGSPRI*RAETTPPAVPTVSA Trigger: TGCACTCACAGTGGGGACCGCCGGCGGCGTGGTTTCTGCTCGGCAGATTCTGGGGGACCCTTGGTCTGTGGAAGACGGGCCCATGGTCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS CCA 90 bp | GGCGGAGGCTCCTCAAAGTCAGACACGAAGCCCCAGCCGGATACATaGCAACGCGTGCCCGCAGCAGGTGGCTTAGCATTTCTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGGSSKSDTKPQPDT*QRVPAAGGLAFLRG Trigger: GCCTCGGAGAAATGCTAAGCCACCTGCTGCGGGCACGCGTTGCCATGTATCCGGCTGGGGCTTCGTGTCTGACTTTGAGGAGCCTCCGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 ENSMUST00000171681.2 |
||
| CDS CCA 90 bp | AGCAGAAACCACGCCGCCGGCGGTCCCCACTGTGAGTGCAGAGCATaGCAGGATTCAGCTGGCCCTGCCAGGAGCTGTTGCAGACACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRNHAAGGPHCECRA*QDSAGPARSCCRHS Trigger: TGAGTGTCTGCAACAGCTCCTGGCAGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACAGTGGGGACCGCCGGCGGCGTGGTTTCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS GCA 90 bp | CACATGAGCTGGGTCAGGGCAGCTGCTGTAGTCAGCACCAGACAGTaGCAGCCTCCTCTTGTCCCAGGCACCATAGCTGTAGAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: HMSWVRAAAVVSTRQ*QPPLVPGTIAVEDG Trigger: GCCATCCTCTACAGCTATGGTGCCTGGGACAAGAGGAGGCTGGCACTGTCTGGTGCTGACTACAGCAGCTGCCCTGACCCAGCTCATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CAA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCAAGCAGGCAGATATCGTaGGCCTGTGTGGCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DSQAQDSQWTLGFTVPRASRQIS*ACVAGW Trigger: CCAGCCTGCCACACAGGCCAACGATATCTGCCTGCT...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CAA 90 bp | TGCCACCCCGAAGCGACGAGTTCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACCCCTGCCAGGAGCTGTaGCAGACACTCAGATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: CHPEATSSGGGSIVGLGYPCQEL*QTLRSS Trigger: ACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGGG...GTAACCAAGACCCACTATGCTGCCCCCTCCTGAACTCGTCGCTTCGGGGTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS GCA 90 bp | GTTGGCCTGTGTGGCAGGCTGGAAATCAGGATGGCTGACAGCAGCTaGAATGCTAAATGTCTGCTGTGTGGGCTCTGGGGCGAGCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VGLCGRLEIRMADSS*NAKCLLCGLWGEQC Trigger: GCACTGCTCGCCCCAGAGCCCACACAGCAGACATTTAGCATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 90 bp | TCAGCTGGCCCTGCCAGGAGCTGTTGCAGACACTCAGATCCAGTATaGGCACCTCGACTTCCATCAGTCCAGGCGGAGGCTCCTCAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: SAGPARSCCRHSDPV*APRLPSVQAEAPQS Trigger: ACTTTGAGGAGCCTCCGCCTGGACTGATGGAAGTCGAGGTGCGCATACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGGGCCAGCTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS GCA 90 bp | AAGACCATGGGCCCGTCTTCCACAGACCAAGGGTCCCCCAGAATCTaGCTCGACTTCCATCAGTCCAGGCGGAGGCTCCTCAAAGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KTMGPSSTDQGSPRI*LDFHQSRRRLLKVR Trigger: TCTGACTTTGAGGAGCCTCCGCCTGGACTGATGGAAGTCGAGGCAGATTCTGGGGGACCCTTGGTCTGTGGAAGACGGGCCCATGGTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171681.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGCTGCAACTTGCCCACACCCACAAGTGCCTTCAAGGAAGCCAAAAGGGAGCAGGCAGATATCGTaGGCCTGTGTGGCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAAATCPHPQVPSRKPKGSRQIS*ACVAGW Trigger: CCAGCCTGCCACACAGGCCAACGATATCTGCCTGCT...CCCTTTTGGCTTCCTTGAAGGCACTTGTGGGTGTGGGCAAGTTGCAGCAGCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS-3UTR CAA 90 bp | GACTCACAGGCCCAGGACAGCCAGTGGACACTAGGATTCACTGTGCCCAGAGCACCCTGCCAGGAGCTGTaGCAGACACTCAGATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: DSQAQDSQWTLGFTVPRAPCQEL*QTLRSS Trigger: ACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGGG...TGCTCTGGGCACAGTGAATCCTAGTGTCCACTGGCTGTCCTGGGCCTGTGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 90 bp | GAGTGCAGAGCATGGCAGGATTCAGCTGGCCCTGCCAGGAGCTGTTaGAGACACTCAGATCCAGTATGCGCACCTCGACTTCCATCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ECRAWQDSAGPARSC*RHSDPVCAPRLPSV Trigger: GACTGATGGAAGTCGAGGTGCGCATACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGGGCCAGCTGAATCCTGCCATGCTCTGCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGAGGGGGCAGCATAGTGGGTCTTGGTTACAAGGGTGACTGTGGATTAAGGCCCTGCCAGGAGCTGTaGCAGACACTCAGATCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SGGGSIVGLGYKGDCGLRPCQEL*QTLRSS Trigger: ACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGGG...CCTTAATCCACAGTCACCCTTGTAACCAAGACCCACTATGCTGCCCCCTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS CCA 90 bp | CCGTTCAACCTTAGCAGGCAGATATCGTTGGCCTGTGTGGCAGGCTaGAAATCAGGATGGCTGACAGCAGCTGCAATGCTAAATGTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFNLSRQISLACVAG*KSGWLTAAAMLNVC Trigger: GCAGACATTTAGCATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGCCAACGATATCTGCCTGCTAAGGTTGAACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS CCA 90 bp | TCCAGGTCACAAACGCTGACACTTGAGTGTAGACATCCGGAGTCTTaGGGTCACCACACCAGAGGCCTGAGAAAGATACAAGACCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRSQTLTLECRHPES*GHHTRGLRKIQDHG Trigger: CCCATGGTCTTGTATCTTTCTCAGGCCTCTGGTGTGGTGACCCCAAGACTCCGGATGTCTACACTCAAGTGTCAGCGTTTGTGACCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 ENSMUST00000171681.2 |
||
| CDS TCA 72 bp | GCCGAGCAGAAACCACGCCGCCGGCGGTCCCCACTGTaGGTGCAGAGCATGGCAGGATTCAGCTGGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: AEQKPRRRRSPL*VQSMAGFSWPC Trigger: GCAGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACAGTGGGGACCGCCGGCGGCGTGGTTTCTGCTCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS GCA 72 bp | GGCCCGTCTTCCACAGACCAAGGGTCCCCCAGAATCTaGCGAGCAGAAACCACGCCGCCGGCGGTCCCCACT | + |
|
Preference number: 6 (lower is better) Translates to: GPSSTDQGSPRI*RAETTPPAVPT Trigger: AGTGGGGACCGCCGGCGGCGTGGTTTCTGCTCGGCAGATTCTGGGGGACCCTTGGTCTGTGGAAGACGGGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 72 bp | AGCAGAAACCACGCCGCCGGCGGTCCCCACTGTGAGTaGAGAGCATGGCAGGATTCAGCTGGCCCTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRNHAAGGPHCE*RAWQDSAGPAR Trigger: CCTGGCAGGGCCAGCTGAATCCTGCCATGCTCTGCACTCACAGTGGGGACCGCCGGCGGCGTGGTTTCTGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS GCA 72 bp | GGCCCGTCTTCCACAGACCAAGGGTCCCCCAGAATCTaGCTCGACTTCCATCAGTCCAGGCGGAGGCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GPSSTDQGSPRI*LDFHQSRRRLL Trigger: GAGGAGCCTCCGCCTGGACTGATGGAAGTCGAGGCAGATTCTGGGGGACCCTTGGTCTGTGGAAGACGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171681.2 |
||
| CDS TCA 72 bp | CCAGCACCACCAGCCCCATGGAGGGGTCCCTGTCACTaGAGCAATGGGCAGCTGACACCACCCAATGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: PAPPAPWRGPCH*SNGQLTPPNGY Trigger: ATACCCATTGGGTGGTGTCAGCTGCCCATTGCTTCAGTGACAGGGACCCCTCCATGGGGCTGGTGGTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 72 bp | TGGGTCAGGGCAGCTGCTGTAGTCAGCACCAGACAGTaGCAGCCTCCTCTTGTCCCAGGCACCATAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: WVRAAAVVSTRQ*QPPLVPGTIAV Trigger: TACAGCTATGGTGCCTGGGACAAGAGGAGGCTGGCACTGTCTGGTGCTGACTACAGCAGCTGCCCTGACCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 72 bp | CCTGCCAGGAGCTGTTGCAGACACTCAGATCCAGTATaGGCACCTCGACTTCCATCAGTCCAGGCGGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PARSCCRHSDPV*APRLPSVQAEA Trigger: AGCCTCCGCCTGGACTGATGGAAGTCGAGGTGCGCATACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS CAA 90 bp | GGGCCCAGGACAGCAGAGCCGTTCAACCTTAGCAGGCAGATATCGTaGGCCTGTGTGGCAGGCTGGAAATCAGGATGGCTGACAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: GPRTAEPFNLSRQIS*ACVAGWKSGWLTAA Trigger: AGCTGCTGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGCCAACGATATCTGCCTGCTAAGGTTGAACGGCTCTGCTGTCCTGGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
||
| CDS GCA 72 bp | GCATGGCAGGATTCAGCTGGCCCTGCCAGGAGCTGTTaGAGACACTCAGATCCAGTATGCGCACCTCGACTT | + |
|
Preference number: 6 (lower is better) Translates to: AWQDSAGPARSC*RHSDPVCAPRL Trigger: AAGTCGAGGTGCGCATACTGGATCTGAGTGTCTGCAACAGCTCCTGGCAGGGCCAGCTGAATCCTGCCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 |
||
| CDS CCA 72 bp | TCCTCAAAGTCAGACACGAAGCCCCAGCCGGATACATaGCAACGCGTGCCCGCAGCAGGTGGCTTAGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: SSKSDTKPQPDT*QRVPAAGGLAF Trigger: AAATGCTAAGCCACCTGCTGCGGGCACGCGTTGCCATGTATCCGGCTGGGGCTTCGTGTCTGACTTTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020573.13 ENSMUST00000167987.2 ENSMUST00000169684.2 ENSMUST00000171681.2 |
||
| CDS TCA 72 bp | AACAGCCCTCACAGAGCGTCCAGTAGAACCAGGGGATaGACTTGCCCGAACCACATCCCAGATCCAGGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: NSPHRASSRTRG*TCPNHIPDPGH Trigger: GTGACCTGGATCTGGGATGTGGTTCGGGCAAGTTCATCCCCTGGTTCTACTGGACGCTCTGTGAGGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 ENSMUST00000171681.2 |
||
| CDS GCA 72 bp | TGTGGCAGGCTGGAAATCAGGATGGCTGACAGCAGCTaGAATGCTAAATGTCTGCTGTGTGGGCTCTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: CGRLEIRMADSS*NAKCLLCGLWG Trigger: GCCCCAGAGCCCACACAGCAGACATTTAGCATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCCTGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| CDS CCA 72 bp | CTCGAAGCTCACAGAGGCCATATAGGGCCGGGAATGTaGCGTTACCTCATGGCCTCCAACAATGTAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: LEAHRGHIGPGM*RYLMASNNVGP Trigger: GGGTCCTACATTGTTGGAGGCCATGAGGTAACGCCACATTCCCGGCCCTATATGGCCTCTGTGAGCTTCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| CDS CCA 72 bp | TCACCACACCAGAGGCCTGAGAAAGATACAAGACCATaGGCCCGTCTTCCACAGACCAAGGGTCCCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: SPHQRPEKDTRP*ARLPQTKGPPE Trigger: TTCTGGGGGACCCTTGGTCTGTGGAAGACGGGCCCATGGTCTTGTATCTTTCTCAGGCCTCTGGTGTGGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 ENSMUST00000171681.2 |
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| CDS CCA 72 bp | CAAACGCTGACACTTGAGTGTAGACATCCGGAGTCTTaGGGTCACCACACCAGAGGCCGAGCAGAAACCACG | + |
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Preference number: 6 (lower is better) Translates to: QTLTLECRHPES*GHHTRGRAETT Trigger: CGTGGTTTCTGCTCGGCCTCTGGTGTGGTGACCCCAAGACTCCGGATGTCTACACTCAAGTGTCAGCGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167987.2 |
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| CDS TCA 72 bp | TGCCCGAACCACATCCCAGATCCAGGTCACAAACGCTaGCACTTGAGTGTAGACATCCGGAGTCTTGGGGTC | + |
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Preference number: 6 (lower is better) Translates to: CPNHIPDPGHKR*HLSVDIRSLGV Trigger: GACCCCAAGACTCCGGATGTCTACACTCAAGTGTCAGCGTTTGTGACCTGGATCTGGGATGTGGTTCGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 ENSMUST00000171681.2 |
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| CDS CAA 72 bp | ACAGCAGAGCCGTTCAACCTTAGCAGGCAGATATCGTaGGCCTGTGTGGCAGGCTGGAAATCAGGATGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TAEPFNLSRQIS*ACVAGWKSGWL Trigger: CAGCCATCCTGATTTCCAGCCTGCCACACAGGCCAACGATATCTGCCTGCTAAGGTTGAACGGCTCTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| CDS CCA 72 bp | CTTAGCAGGCAGATATCGTTGGCCTGTGTGGCAGGCTaGAAATCAGGATGGCTGACAGCAGCTGCAATGCTA | + |
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Preference number: 6 (lower is better) Translates to: LSRQISLACVAG*KSGWLTAAAML Trigger: TAGCATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGCCAACGATATCTGCCTGCTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| CDS CCA 72 bp | ATATCGTTGGCCTGTGTGGCAGGCTGGAAATCAGGATaGCTGACAGCAGCTGCAATGCTAAATGTCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: ISLACVAGWKSG*LTAAAMLNVCC Trigger: ACAGCAGACATTTAGCATTGCAGCTGCTGTCAGCCATCCTGATTTCCAGCCTGCCACACAGGCCAACGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 |
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| CDS CCA 72 bp | CAAACGCTGACACTTGAGTGTAGACATCCGGAGTCTTaGGGTCACCACACCAGAGGCCTGAGAAAGATACAA | + |
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Preference number: 6 (lower is better) Translates to: QTLTLECRHPES*GHHTRGLRKIQ Trigger: TTGTATCTTTCTCAGGCCTCTGGTGTGGTGACCCCAAGACTCCGGATGTCTACACTCAAGTGTCAGCGTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020573.13 ENSMUST00000169684.2 ENSMUST00000171681.2 |
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