Pregenerated sensors for PRSS54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048400Ensembl transcript IDs: ENSMUST00000052690.13, ENSMUST00000180075.2, ENSMUST00000213096.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCTTCCCACATATGGGAGTGGGACAGAGGGAGGAGAGCCAGCCTaGCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCAT | + |
|
Preference number: 1 (lower is better) Translates to: DLPTYGSGTEGGEPA*RCRGPAHGHPGGTH Trigger: ATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGCCAGGCTGGCTCTCCTCCCTCTGTCCCACTCCCATATGTGGGAAGGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACGTGTACTGCTTGTCCTaGATGGACACCACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPWACPWPPRGHPSRADVYCLS*MDTTQG Trigger: CCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACAC...GTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACAACTTCTCCCAGAGGTaGAGCGAGGACAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALPWACPWPPRGHPSRADNFSQR*SEDREG Trigger: CCCTTCCCTGTCCTCGCTCCACCTCTGGGAGAAGTT...GTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACGGATCCAGAACTCGCTaGGAATGCAGCCGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALPWACPWPPRGHPSRADGSRTR*ECSRKP Trigger: TGGCTTTCGGCTGCATTCTCAGCGAGTTCTGGATCC...GTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACATAACCTCCTTCCTGTaGTGGAGAGCGGAGGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHITSFL*WRAEAV Trigger: CACCGCCTCCGCTCTCCAGCACAGGAAGGAGGTTAT...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052690.13 |
||
| CDS-3UTR CCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACAACTTCTCCCAGAGGTaGAGCGAGGACAGGGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHNFSQR*SEDREG Trigger: CCCTTCCCTGTCCTCGCTCCACCTCTGGGAGAAGTT...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACCTCCTTCCTGTGCTaGAGAGCGGAGGCGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSTSFLC*RAEAVL Trigger: CAGCACCGCCTCCGCTCTCCAGCACAGGAAGGAGGT...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052690.13 |
||
| CDS-3UTR GCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACTGGTGGCTTTCTGGATaGCGCAAATGGCAGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHWWLSG*RKWQMT Trigger: CGTCATCTGCCATTTGCGGCATCCAGAAAGCCACCA...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACGAGATCCAGCTTCTTTaGCTGGCACATCATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALPWACPWPPRGHPSRADEIQLL*LAHHRA Trigger: AGCCCTATGATGTGCCAGGCAAAGAAGCTGGATCTC...GTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGGAAGCAGATGGCCTaGACCAGGTCGTTGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPWACPWPPRGHPSRADTRKQMA*TRSLKC Trigger: GCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCT...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCTCTGGATGCCGCAAATaGCAGATGACGAGTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LPWACPWPPRGHPSRADTSGCRK*QMTSGI Trigger: TATCCCACTCGTCATCTGCCATTTGCGGCATCCAGA...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCATCATAGGGCTTCCTaGTTCCCCCAGGCAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHHHRAS*FPQANI Trigger: AATGTTTGCCTGGGGGAACCAGGAAGCCCTATGATG...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTGGATCCAGAACTCGCTaGGAATGCAGCCGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSGSRTR*ECSRKP Trigger: TGGCTTTCGGCTGCATTCTCAGCGAGTTCTGGATCC...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCGCTTATGTAGCTTTTTaGCCAGGAAGCAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPWACPWPPRGHPSRADTAYVAF*PGSRWP Trigger: AGGCCATCTGCTTCCTGGGCAAAAAGCTACATAAGC...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | TGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCATGCCCAGCATCCTTCTaGTTGTTGGACTTAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CRGPAHGHPGGTHQEQTPCPASF*LLDLVD Trigger: GTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCA...TGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTGTGTACTGCTTGTCCTaGATGGACACCACCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRGHPSRADTRTVRQAPVYCLS*MDTTQG Trigger: CCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACAC...AGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTCAGCCGAAAGCCAGGTaGGTGTACTGCTTGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PPRGHPSRADTRTVRQAPQPKAR*VYCLSW Trigger: CCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTG...AGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCACTGAATACTCTCTGTaGTCAGTCTTTCGGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPWACPWPPRGHPSRADTTEYSL*SVFRGS Trigger: GGATCCCCGAAAGACTGACCACAGAGAGTATTCAGT...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCCCAGGCAAACATTGTTaGGTTCCTTTGTGTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPWACPWPPRGHPSRADTPGKHC*VPLCDW Trigger: CCAGTCACACAAAGGAACCCAACAATGTTTGCCTGG...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | TGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCATGTAGTCTGCCACACTaGTGTACAGAAACAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CRGPAHGHPGGTHQEQTPCSLPH*CTETGQ Trigger: CTGGCCTGTTTCTGTACACCAGTGTGGCAGACTACA...TGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTGTTGCCTGTTTACCCTaGAGTTCTGCCCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSVACLP*SSAQHP Trigger: AGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAAC...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACATCAAGATCCTTTCTTaGGACCAATGCAGCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHIKILS*DQCSLF Trigger: GAACAGGCTGCATTGGTCTCAAGAAAGGATCTTGAT...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTTGGTGGCTTTCTGGATaGCGCAAATGGCAGATGACG | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSWWLSG*RKWQMT Trigger: CGTCATCTGCCATTTGCGGCATCCAGAAAGCCACCA...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCTTCCTGTTGCAGACGTaGGATTCCATCCTGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: AHGHPGGTHQEQTPEQYGFLLQT*DSILLP Trigger: GGGTAGCAGGATGGAATCCCACGTCTGCAACAGGAA...GCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACGATGATGGTATTGACTaGATACTCTCTGTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHDDGID*ILSVVS Trigger: ACTGACCACAGAGAGTATTCAGTCAATACCATCATC...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCGTTGCCTGTTTACCCTaGAGTTCTGCCCAGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSVACLP*SSAQHP Trigger: AGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAAC...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTCCAGTCGCTGTAGTCTaGCACACTGGTGTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSPVAVV*HTGVQK Trigger: TTTCTGTACACCAGTGTGGCAGACTACAGCGACTGG...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACTTGTCAAAGTTCTCATaGGGGATGATGGTATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: ALPWACPWPPRGHPSRADLSKFS*GMMVLT Trigger: AGTCAATACCATCATCCCCCATGAGAACTTTGACAA...GTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCAGGAAGCAGATGGCCTaGACCAGGTCGTTGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSRKQMA*TRSLKC Trigger: GCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCT...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTATTCCTGTTGCAGACGTaGGATTCCATCCTGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: ACPWPPRGHPSRADTRTVFLLQT*DSILLP Trigger: GGGTAGCAGGATGGAATCCCACGTCTGCAACAGGAA...TACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACGTTCCTTTGTGTGACTaGCACATTCTGTTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AAVGLPMATQGAPIKSRHVPLCD*HILFSG Trigger: ACCAGAAAACAGAATGTGCCAGTCACACAAAGGAAC...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCGTTCCTTTGTGTGACTaGCACATTCTGTTTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LPWACPWPPRGHPSRADTVPLCD*HILFSG Trigger: ACCAGAAAACAGAATGTGCCAGTCACACAAAGGAAC...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGGGAGGGCTATGTTATTaGCCATTGAGACGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPAHGHPGGTHQEQTPEQGGLCY*PLRRCQ Trigger: TTGACAACGTCTCAATGGGCAATAACATAGCCCTCC...CTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCGCTTATGTAGCTTTTTaGCCAGGAAGCAGATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AHGHPGGTHQEQTPEQYGAYVAF*PGSRWP Trigger: AGGCCATCTGCTTCCTGGGCAAAAAGCTACATAAGC...GCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCGAGATCCAGCTTCTTTaGCTGGCACATCATAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSEIQLL*LAHHRA Trigger: AGCCCTATGATGTGCCAGGCAAAGAAGCTGGATCTC...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | TGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCCAGTCGCTGTAGTCTaGCACACTGGTGTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CPWPPRGHPSRADTRTVRPVAVV*HTGVQK Trigger: TTTCTGTACACCAGTGTGGCAGACTACAGCGACTGG...CCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTATGCCCAGCATCCTTCTaGTTGTTGGACTTAGTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ACPWPPRGHPSRADTRTVCPASF*LLDLVD Trigger: GTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCA...TACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCCATCATAGGGCTTCCTaGTTCCCCCAGGCAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSHHRAS*FPQANI Trigger: AATGTTTGCCTGGGGGAACCAGGAAGCCCTATGATG...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCTGTAGTCTGCCACACTaGTGTACAGAAACAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSCSLPH*CTETGQ Trigger: CTGGCCTGTTTCTGTACACCAGTGTGGCAGACTACA...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCCATGTGATTTCCTGTTaGAGACGTGGGATTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSHVISC*RRGIPS Trigger: GGATGGAATCCCACGTCTGCAACAGGAAATCACATG...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTATTTACCCTGAAGTTCTaGCCAGCATCCTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACPWPPRGHPSRADTRTVFTLKF*PASFCL Trigger: CAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAA...TACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTATCTGGATGCCGCAAATaGCAGATGACGAGTGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: HPGGTHQEQTPEQYGRHLSGCRK*QMTSGI Trigger: TATCCCACTCGTCATCTGCCATTTGCGGCATCCAGA...TAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTGCACATTCTGTTTTCTaGTGTCTACGTAAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSAHSVF*CLRKGH Trigger: GTGTCCCTTACGTAGACACCAGAAAACAGAATGTGC...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTGATGATGGTATTGACTaGATACTCTCTGTGGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLPMATQGAPIKSRHQNSDDGID*ILSVVS Trigger: ACTGACCACAGAGAGTATTCAGTCAATACCATCATC...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | GCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCATACTCATTGTCATGTaGTTTCCTGTTGCAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHGHPGGTHQEQTPEQYGILIVM*FPVADV Trigger: CACGTCTGCAACAGGAAATCACATGACAATGAGTAT...GCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGCTTGGGTTCCTTTGTGTaGCTGGCACATTCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRGHPSRADTRTVRQAPSLGSFV*LAHSVF Trigger: GAAAACAGAATGTGCCAGTCACACAAAGGAACCCAA...GCTAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | GCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTAGGAGGGCTATGTTATTaGCCATTGAGACGTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ACPWPPRGHPSRADTRTVGGLCY*PLRRCQ Trigger: TTGACAACGTCTCAATGGGCAATAACATAGCCCTCC...TACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR GCA 90 bp | CACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTATTTACCCTGAAGTTCTaGCCAGCATCCTTCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPGGTHQEQTPEQYGRHLFTLKF*PASFCL Trigger: CAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAA...TAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTGCACATTCTGTTTTCTaGTGTCTACGTAAGGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PPRGHPSRADTRTVRQAPAHSVF*CLRKGH Trigger: GTGTCCCTTACGTAGACACCAGAAAACAGAATGTGC...AGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | CACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTATTGGGTTCCTTTGTGTaGCTGGCACATTCTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPGGTHQEQTPEQYGRHLLGSFV*LAHSVF Trigger: GAAAACAGAATGTGCCAGTCACACAAAGGAACCCAA...TAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR TCA 90 bp | CACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAATCAAGATCCTTTCTTaGGACCAATGCAGCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPGGTHQEQTPEQYGRHLIKILS*DQCSLF Trigger: GAACAGGCTGCATTGGTCTCAAGAAAGGATCTTGAT...TAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCTTGTCAAAGTTCTCATaGGGGATGATGGTATTGACT | + |
|
Preference number: 4 (lower is better) Translates to: AHGHPGGTHQEQTPEQYGLSKFS*GMMVLT Trigger: AGTCAATACCATCATCCCCCATGAGAACTTTGACAA...GCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGGTGGGTGTACTGCTaGTCCTGGATGGACACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LPWACPWPPRGHPSRADTRWVYC*SWMDTT Trigger: GGTGGTGTCCATCCAGGACAAGCAGTACACCCACCT...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGGACATTCTTTGCCCTaGGGAGTAGGAGTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: CRGPAHGHPGGTHQEQTPGHSLP*GVGVGP Trigger: TGGCCCCACTCCTACTCCCAAGGGCAAAGAATGTCC...TGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | CTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCGGCTTATGTAGCTTTTaGCCCAGGAAGCAGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPWACPWPPRGHPSRADTGLCSF*PRKQMA Trigger: GGCCATCTGCTTCCTGGGCAAAAAGCTACATAAGCC...GGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS GCA 90 bp | AGGGCCAGCCTTCCTCGTCTTGGCCGTGATCCAGTCGCTGTAGTCTaGCACACTGGTGTACAGAAACAGGCCAGGGCACGAGTCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RASLPRLGRDPVAVV*HTGVQKQARARVAS Trigger: GGAGGCGACTCGTGCCCTGGCCTGTTTCTGTACACCAGTGTGGCAGACTACAGCGACTGGATCACGGCCAAGACGAGGAAGGCTGGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 90 bp | GGTGGAGCGAGGACAGGGAAGGGCCAGCCTTCCTCGTCTTGGCCGTaGTCCAGTCGCTGTAGTCTGCCACACTGGTGTACAGAAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GGARTGKGQPSSSWP*SSRCSLPHWCTETG Trigger: GCCTGTTTCTGTACACCAGTGTGGCAGACTACAGCGACTGGATCACGGCCAAGACGAGGAAGGCTGGCCCTTCCCTGTCCTCGCTCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACTGGGGGATGATGGTATaGACTGAATACTCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVGLPMATQGAPIKSRHWGMMV*TEYSLW Trigger: CCACAGAGAGTATTCAGTCAATACCATCATCCCCCA...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTCCCGCTGGTTTCCGGTaGCCTGTTTACCCTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: GLPMATQGAPIKSRHQNSPAGFR*PVYPEV Trigger: AACTTCAGGGTAAACAGGCAACCGGAAACCAGCGGG...ACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS CCA 90 bp | TCGCTGAGAATGCAGCCGAAAGCCAGGTGGGTGTACTGCTTGTCCTaGATGGACACCACCCAGGGGAACTCGGTGCTGCTCACGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRMQPKARWVYCLS*MDTTQGNSVLLTRF Trigger: GAACCTCGTGAGCAGCACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTTGCCCATTGAGACGTaGTCAAAGTTCTCATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GPAHGHPGGTHQEQTPEQLPIET*SKFSWG Trigger: CCCCCATGAGAACTTTGACAACGTCTCAATGGGCAA...CTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GCGCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACTCCTCAGGATACTCATaGTCATGTGATTTCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ALPWACPWPPRGHPSRADSSGYS*SCDFLL Trigger: CAACAGGAAATCACATGACAATGAGTATCCTGAGGA...GTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACTTGTCAGGGCAATATTaGATTCGTGAAAGGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVGLPMATQGAPIKSRHLSGQY*IRERGA Trigger: AGCTCCCCTTTCACGAATCAAATATTGCCCTGACAA...GTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | CACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTAGGACATTCTTTGCCCTaGGGAGTAGGAGTGGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HPGGTHQEQTPEQYGRHLGHSLP*GVGVGP Trigger: TGGCCCCACTCCTACTCCCAAGGGCAAAGAATGTCC...TAGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTCCCGCTGGTTTCCGGTaGCCTGTTTACCCTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPRGHPSRADTRTVRQAPPAGFR*PVYPEV Trigger: AACTTCAGGGTAAACAGGCAACCGGAAACCAGCGGG...AGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS CCA 90 bp | GTGCTGAGGATCCAGAACTCGCTGAGAATGCAGCCGAAAGCCAGGTaGGTGTACTGCTTGTCCTGGATGGACACCACCCAGGGGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: VLRIQNSLRMQPKAR*VYCLSWMDTTQGNS Trigger: CGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAGCGAGTTCTGGATCCTCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCTTGCCCATTGAGACGTaGTCAAAGTTCTCATGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AHGHPGGTHQEQTPEQYGLPIET*SKFSWG Trigger: CCCCCATGAGAACTTTGACAACGTCTCAATGGGCAA...GCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | TGCCGTGGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCACATCAAGATCCTTTCTaGAGACCAATGCAGCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CRGPAHGHPGGTHQEQTPHQDPF*RPMQPV Trigger: AACAGGCTGCATTGGTCTCAAGAAAGGATCTTGATG...TGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCCACGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS GCA 90 bp | GGGTGTACTGCTTGTCCTGGATGGACACCACCCAGGGGAACTCGGTaGTGCTCACGAGGTTCTCCTTTAACTTGTCCGCGATGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GCTACPGWTPPRGTR*CSRGSPLTCPRWWL Trigger: AAGCCACCATCGCGGACAAGTTAAAGGAGAACCTCGTGAGCAGCACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCTGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTTGTCAGGGCAATATTaGATTCGTGAAAGGGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPAHGHPGGTHQEQTPEQLSGQY*IRERGA Trigger: AGCTCCCCTTTCACGAATCAAATATTGCCCTGACAA...CTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCAGGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTTGGGGGATGATGGTATaGACTGAATACTCTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PPRGHPSRADTRTVRQAPWGMMV*TEYSLW Trigger: CCACAGAGAGTATTCAGTCAATACCATCATCCCCCA...AGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCATGGCCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCATCAAGATCCTTTCTaGAGACCAATGCAGCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPWPPRGHPSRADTRTVRHQDPF*RPMQPV Trigger: AACAGGCTGCATTGGTCTCAAGAAAGGATCTTGATG...CCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGGCCATGGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS GCA 90 bp | TCCATAGGCCAGGAGTCCTCTCAGGATCCAGAGATCCAGCTTCTTTaGCTGGCACATCATAGGGCTTCCTGGTTCCCCCAGGCAAACATT | + |
|
Preference number: 5 (lower is better) Translates to: SIGQESSQDPEIQLL*LAHHRASWFPQANI Trigger: AATGTTTGCCTGGGGGAACCAGGAAGCCCTATGATGTGCCAGGCAAAGAAGCTGGATCTCTGGATCCTGAGAGGACTCCTGGCCTATGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS-3UTR CAA 90 bp | CCACCCAGGGGGCACCCATCAAGAGCAGACACCAGAACAGTACGGCAGGCACCTTCCTCAGGATACTCATaGTCATGTGATTTCCTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPRGHPSRADTRTVRQAPSSGYS*SCDFLL Trigger: CAACAGGAAATCACATGACAATGAGTATCCTGAGGA...AGGTGCCTGCCGTACTGTTCTGGTGTCTGCTCTTGATGGGTGCCCCCTGGGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052690.13 ENSMUST00000213096.2 |
||
| CDS CCA 90 bp | AAGGCTGGTGGCTTATGTAGCTTTTTGCCCAGGAAGCAGATGGCCTaGACCAGGTCGTTGAAATGCATGGCGGATTCTGTCTTCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAGGLCSFLPRKQMA*TRSLKCMADSVFRR Trigger: CCTCCTGAAGACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCTGGGCAAAAAGCTACATAAGCCACCAGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 90 bp | GATCCAGAGATCCAGCTTCTTTGCCTGGCACATCATAGGGCTTCCTaGTTCCCCCAGGCAAACATTGTTGGGTTCCTTTGTGTGACTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPEIQLLCLAHHRAS*FPQANIVGFLCVTG Trigger: GCCAGTCACACAAAGGAACCCAACAATGTTTGCCTGGGGGAACCAGGAAGCCCTATGATGTGCCAGGCAAAGAAGCTGGATCTCTGGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 90 bp | CTTTCGGGGATCCATGTTAGATATACCAACAACAGCAATAACCTCTaGCCTGTGCTGGAGAGCGGAGGCGGTGCTGAGGATCCAGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LSGIHVRYTNNSNNL*PVLESGGGAEDPEL Trigger: GAGTTCTGGATCCTCAGCACCGCCTCCGCTCTCCAGCACAGGCCAGAGGTTATTGCTGTTGTTGGTATATCTAACATGGATCCCCGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 90 bp | TTCGAAGGCCCGCTGGTTTCCGGTTGCCTGTTTACCCTGAAGTTCTaGCCAGCATCCTTCTGCTTGTTGGACTTAGTGGACATTCTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FEGPLVSGCLFTLKF*PASFCLLDLVDILC Trigger: GCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAACCGGAAACCAGCGGGCCTTCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 90 bp | AGCTTTTTGCCCAGGAAGCAGATGGCCTGGACCAGGTCGTTGAAATaGATGGCGGATTCTGTCTTCAGGAGGGCTATGTTATTGCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: SFLPRKQMAWTRSLK*MADSVFRRAMLLPI Trigger: AATGGGCAATAACATAGCCCTCCTGAAGACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCTGGGCAAAAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 90 bp | TCCATGTTAGATATACCAACAACAGCAATAACCTCCTTCCTGTGCTaGAGAGCGGAGGCGGTGCTGAGGATCCAGAACTCGCTGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: SMLDIPTTAITSFLC*RAEAVLRIQNSLRM Trigger: CATTCTCAGCGAGTTCTGGATCCTCAGCACCGCCTCCGCTCTCCAGCACAGGAAGGAGGTTATTGCTGTTGTTGGTATATCTAACATGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052690.13 |
||
| CDS TCA 90 bp | TATGTAGCTTTTTGCCCAGGAAGCAGATGGCCTGGACCAGGTCGTTaGAATGCATGGCGGATTCTGTCTTCAGGAGGGCTATGTTATTGC | + |
|
Preference number: 5 (lower is better) Translates to: YVAFCPGSRWPGPGR*NAWRILSSGGLCYC Trigger: GCAATAACATAGCCCTCCTGAAGACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCTGGGCAAAAAGCTACATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 90 bp | GTATGTATAGAAAACGAATTCGTTGTCAGGGCAATATTTGATTCGTaGAAGGGGAGCTCAAAGACCAACTTCTCCCAGAGGTGGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VCIENEFVVRAIFDS*KGSSKTNFSQRWSE Trigger: CTCGCTCCACCTCTGGGAGAAGTTGGTCTTTGAGCTCCCCTTTCACGAATCAAATATTGCCCTGACAACGAATTCGTTTTCTATACATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | ATGCAGCCGAAAGCCAGGTGGGTGTACTGCTTGTCCTaGATGGACACCACCCAGGGGAACTCGGTGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: MQPKARWVYCLS*MDTTQGNSVLL Trigger: GAGCAGCACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | CAGAACTCGCTGAGAATGCAGCCGAAAGCCAGGTGGGTGTACTGCTaGTCCTGGATGGACACCACCCAGGGGAACTCGGTGCTGCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: QNSLRMQPKARWVYC*SWMDTTQGNSVLLT Trigger: CGTGAGCAGCACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAGCGAGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | TCGCTGAGAATGCAGCCGAAAGCCAGGTGGGTGTACTaGTTGTCCTGGATGGACACCACCCAGGGGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLRMQPKARWVY*LSWMDTTQGNS Trigger: CGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | CTGAGAATGCAGCCGAAAGCCAGGTGGGTGTACTGCTaGTCCTGGATGGACACCACCCAGGGGAACTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LRMQPKARWVYC*SWMDTTQGNSV Trigger: CACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | TGTCCTGGATGGACACCACCCAGGGGAACTCGGTGCTaGTCACGAGGTTCTCCTTTAACTTGTCCGCGATGG | + |
|
Preference number: 6 (lower is better) Translates to: CPGWTPPRGTRC*SRGSPLTCPRW Trigger: CCATCGCGGACAAGTTAAAGGAGAACCTCGTGAGCAGCACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | GCTTGTCCTGGATGGACACCACCCAGGGGAACTCGGTaGTGCTCACGAGGTTCTCCTTTAACTTGTCCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: ACPGWTPPRGTR*CSRGSPLTCPR Trigger: TCGCGGACAAGTTAAAGGAGAACCTCGTGAGCAGCACCGAGTTCCCCTGGGTGGTGTCCATCCAGGACAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | CAGGAGTCCTCTCAGGATCCAGAGATCCAGCTTCTTTaGCTGGCACATCATAGGGCTTCCTGGTTCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QESSQDPEIQLL*LAHHRASWFPQ Trigger: CTGGGGGAACCAGGAAGCCCTATGATGTGCCAGGCAAAGAAGCTGGATCTCTGGATCCTGAGAGGACTCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | ATCCAGAACTCGCTGAGAATGCAGCCGAAAGCCAGGTaGGTGTACTGCTTGTCCTGGATGGACACCACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: IQNSLRMQPKAR*VYCLSWMDTTQ Trigger: CTGGGTGGTGTCCATCCAGGACAAGCAGTACACCCACCTGGCTTTCGGCTGCATTCTCAGCGAGTTCTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | TCGAAGGCCCGCTGGTTTCCGGTTGCCTGTTTACCCTaGAGTTCTGCCCAGCATCCTTCTGCTTGTTGGACT | + |
|
Preference number: 6 (lower is better) Translates to: SKARWFPVACLP*SSAQHPSACWT Trigger: AGTCCAACAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAACCGGAAACCAGCGGGCCTTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | GTGGCTTTCTGGATGCCGCAAATGGCAGATGACGAGTaGGATATGTACAGCAGCATCAGCAGCATCCCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: VAFWMPQMADDE*DMYSSISSIPR Trigger: GCGAGGGATGCTGCTGATGCTGCTGTACATATCCCACTCGTCATCTGCCATTTGCGGCATCCAGAAAGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | GATATACCAACAACAGCAATAACCTCTGGCCTGTGCTaGAGAGCGGAGGCGGTGCTGAGGATCCAGAACTCG | + |
|
Preference number: 6 (lower is better) Translates to: DIPTTAITSGLC*RAEAVLRIQNS Trigger: CGAGTTCTGGATCCTCAGCACCGCCTCCGCTCTCCAGCACAGGCCAGAGGTTATTGCTGTTGTTGGTATATC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | GGGAACTCGGTGCTGCTCACGAGGTTCTCCTTTAACTaGTCCGCGATGGTGGCTTTCTGGATGCCGCAAATG | + |
|
Preference number: 6 (lower is better) Translates to: GNSVLLTRFSFN*SAMVAFWMPQM Trigger: CATTTGCGGCATCCAGAAAGCCACCATCGCGGACAAGTTAAAGGAGAACCTCGTGAGCAGCACCGAGTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | CTGAATAGCCACCTTCGAAGGCCCGCTGGTTTCCGGTaGCCTGTTTACCCTGAAGTTCTGCCCAGCATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LNSHLRRPAGFR*PVYPEVLPSIL Trigger: AAGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAACCGGAAACCAGCGGGCCTTCGAAGGTGGCTATTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | TTTTGCCCAGGAAGCAGATGGCCTGGACCAGGTCGTTaGAATGCATGGCGGATTCTGTCTTCAGGAGGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: FCPGSRWPGPGR*NAWRILSSGGL Trigger: TAGCCCTCCTGAAGACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCTGGGCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | CCCAGGAAGCAGATGGCCTGGACCAGGTCGTTGAAATaGATGGCGGATTCTGTCTTCAGGAGGGCTATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: PRKQMAWTRSLK*MADSVFRRAML Trigger: TAACATAGCCCTCCTGAAGACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | CCGCTGGTTTCCGGTTGCCTGTTTACCCTGAAGTTCTaGCCAGCATCCTTCTGCTTGTTGGACTTAGTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PLVSGCLFTLKF*PASFCLLDLVD Trigger: GTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAACAGGCAACCGGAAACCAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | CAGCAGTTCTTCAAGGCTGGTGGCTTATGTAGCTTTTaGCCCAGGAAGCAGATGGCCTGGACCAGGTCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: QQFFKAGGLCSF*PRKQMAWTRSL Trigger: CAACGACCTGGTCCAGGCCATCTGCTTCCTGGGCAAAAAGCTACATAAGCCACCAGCCTTGAAGAACTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | TTAGATATACCAACAACAGCAATAACCTCTGGCCTGTaGTGGAGAGCGGAGGCGGTGCTGAGGATCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LDIPTTAITSGL*WRAEAVLRIQN Trigger: GTTCTGGATCCTCAGCACCGCCTCCGCTCTCCAGCACAGGCCAGAGGTTATTGCTGTTGTTGGTATATCTAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | GGCTTATGTAGCTTTTTGCCCAGGAAGCAGATGGCCTaGACCAGGTCGTTGAAATGCATGGCGGATTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: GLCSFLPRKQMA*TRSLKCMADSV Trigger: GACAGAATCCGCCATGCATTTCAACGACCTGGTCCAGGCCATCTGCTTCCTGGGCAAAAAGCTACATAAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | ATCCAGCTTCTTTGCCTGGCACATCATAGGGCTTCCTaGTTCCCCCAGGCAAACATTGTTGGGTTCCTTTGT | + |
|
Preference number: 6 (lower is better) Translates to: IQLLCLAHHRAS*FPQANIVGFLC Trigger: ACAAAGGAACCCAACAATGTTTGCCTGGGGGAACCAGGAAGCCCTATGATGTGCCAGGCAAAGAAGCTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | ATCCATGTTAGATATACCAACAACAGCAATAACCTCTaGCCTGTGCTGGAGAGCGGAGGCGGTGCTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: IHVRYTNNSNNL*PVLESGGGAED Trigger: ATCCTCAGCACCGCCTCCGCTCTCCAGCACAGGCCAGAGGTTATTGCTGTTGTTGGTATATCTAACATGGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | GTTCTGCCCAGCATCCTTCTGCTTGTTGGACTTAGTGGACATTCTTaGCCCTTGGGAGTAGGAGTGGGGCCATTCAGCATAGGTATGTAT | + |
|
Preference number: 6 (lower is better) Translates to: VLPSILLLVGLSGHS*PLGVGVGPFSIGMY Trigger: ATACATACCTATGCTGAATGGCCCCACTCCTACTCCCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | AAGAAAACAAGCACGAAGGACATCAAGATCCTTTCTTaGGACCAATGCAGCCTGTTCTGGCCAGCCACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: KKTSTKDIKILS*DQCSLFWPATA Trigger: GGCTGTGGCTGGCCAGAACAGGCTGCATTGGTCTCAAGAAAGGATCTTGATGTCCTTCGTGCTTGTTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | GCATGGCGGATTCTGTCTTCAGGAGGGCTATGTTATTaGCCATTGAGACGTTGTCAAAGTTCTCATGGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: AWRILSSGGLCY*PLRRCQSSHGG Trigger: TCCCCCATGAGAACTTTGACAACGTCTCAATGGGCAATAACATAGCCCTCCTGAAGACAGAATCCGCCATGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS GCA 72 bp | TGCCTGTTTACCCTGAAGTTCTGCCCAGCATCCTTCTaGTTGTTGGACTTAGTGGACATTCTTTGCCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: CLFTLKFCPASF*LLDLVDILCPW Trigger: CCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAACAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | CCCCCAGGCAAACATTGTTGGGTTCCTTTGTGTGACTaGCACATTCTGTTTTCTGGTGTCTACGTAAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: PPGKHCWVPLCD*HILFSGVYVRD Trigger: GTCCCTTACGTAGACACCAGAAAACAGAATGTGCCAGTCACACAAAGGAACCCAACAATGTTTGCCTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | TGCATGGCGGATTCTGTCTTCAGGAGGGCTATGTTATaGCCCATTGAGACGTTGTCAAAGTTCTCATGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CMADSVFRRAML*PIETLSKFSWG Trigger: CCCCCATGAGAACTTTGACAACGTCTCAATGGGCAATAACATAGCCCTCCTGAAGACAGAATCCGCCATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | CTTCTGCTTGTTGGACTTAGTGGACATTCTTTGCCCTaGGGAGTAGGAGTGGGGCCATTCAGCATAGGTATG | + |
|
Preference number: 6 (lower is better) Translates to: LLLVGLSGHSLP*GVGVGPFSIGM Trigger: CATACCTATGCTGAATGGCCCCACTCCTACTCCCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | AGCATCCTTCTGCTTGTTGGACTTAGTGGACATTCTTaGCCCTTGGGAGTAGGAGTGGGGCCATTCAGCATA | + |
|
Preference number: 6 (lower is better) Translates to: SILLLVGLSGHS*PLGVGVGPFSI Trigger: TATGCTGAATGGCCCCACTCCTACTCCCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | CTGTTTACCCTGAAGTTCTGCCCAGCATCCTTCTGCTaGTTGGACTTAGTGGACATTCTTTGCCCTTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LFTLKFCPASFC*LDLVDILCPWE Trigger: CTCCCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCTGGGCAGAACTTCAGGGTAAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | GGTTCCCCCAGGCAAACATTGTTGGGTTCCTTTGTGTaGCTGGCACATTCTGTTTTCTGGTGTCTACGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSPRQTLLGSFV*LAHSVFWCLRK Trigger: CTTACGTAGACACCAGAAAACAGAATGTGCCAGTCACACAAAGGAACCCAACAATGTTTGCCTGGGGGAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | TTCCTGGTTCCCCCAGGCAAACATTGTTGGGTTCCTTaGTGTGACTGGCACATTCTGTTTTCTGGTGTCTAC | + |
|
Preference number: 6 (lower is better) Translates to: FLVPPGKHCWVP*CDWHILFSGVY Trigger: GTAGACACCAGAAAACAGAATGTGCCAGTCACACAAAGGAACCCAACAATGTTTGCCTGGGGGAACCAGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | CCCAGCATCCTTCTGCTTGTTGGACTTAGTGGACATTCTTTGCCCTaGGGAGTAGGAGTGGGGCCATTCAGCATAGGTATGTATAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: PSILLLVGLSGHSLP*GVGVGPFSIGMYRK Trigger: TTTTCTATACATACCTATGCTGAATGGCCCCACTCCTACTCCCAAGGGCAAAGAATGTCCACTAAGTCCAACAAGCAGAAGGATGCTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | TCGTTGAAATGCATGGCGGATTCTGTCTTCAGGAGGGCTATGTTATaGCCCATTGAGACGTTGTCAAAGTTCTCATGGGGGATGATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: SLKCMADSVFRRAML*PIETLSKFSWGMMV Trigger: TACCATCATCCCCCATGAGAACTTTGACAACGTCTCAATGGGCAATAACATAGCCCTCCTGAAGACAGAATCCGCCATGCATTTCAACGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | GACACACTTCAATGTCCTTCACGGAGATTCTCCTCAGGATACTCATaGTCATGTGATTTCCTGTTGCAGACGTGGGATTCCATCCTGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DTLQCPSRRFSSGYS*SCDFLLQTWDSILL Trigger: TAGCAGGATGGAATCCCACGTCTGCAACAGGAAATCACATGACAATGAGTATCCTGAGGAGAATCTCCGTGAAGGACATTGAAGTGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | GGATTCTGTCTTCAGGAGGGCTATGTTATTGCCCATTaGGACGTTGTCAAAGTTCTCATGGGGGATGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GFCLQEGYVIAH*DVVKVLMGDDG Trigger: ACCATCATCCCCCATGAGAACTTTGACAACGTCTCAATGGGCAATAACATAGCCCTCCTGAAGACAGAATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | TTCACGGAGATTCTCCTCAGGATACTCATTGTCATGTaGTTTCCTGTTGCAGACGTGGGATTCCATCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: FTEILLRILIVM*FPVADVGFHPA Trigger: AGCAGGATGGAATCCCACGTCTGCAACAGGAAATCACATGACAATGAGTATCCTGAGGAGAATCTCCGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | GAGACGTTGTCAAAGTTCTCATGGGGGATGATGGTATaGACTGAATACTCTCTGTGGTCAGTCTTTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: ETLSKFSWGMMV*TEYSLWSVFRG Trigger: TCCCCGAAAGACTGACCACAGAGAGTATTCAGTCAATACCATCATCCCCCATGAGAACTTTGACAACGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 72 bp | CAATGTCCTTCACGGAGATTCTCCTCAGGATACTCATaGTCATGTGATTTCCTGTTGCAGACGTGGGATTCC | + |
|
Preference number: 6 (lower is better) Translates to: QCPSRRFSSGYS*SCDFLLQTWDS Trigger: GGAATCCCACGTCTGCAACAGGAAATCACATGACAATGAGTATCCTGAGGAGAATCTCCGTGAAGGACATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | TTGCCCATTGAGACGTTGTCAAAGTTCTCATGGGGGATGATGGTATaGACTGAATACTCTCTGTGGTCAGTCTTTCGGGGATCCATGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LPIETLSKFSWGMMV*TEYSLWSVFRGSML Trigger: TAACATGGATCCCCGAAAGACTGACCACAGAGAGTATTCAGTCAATACCATCATCCCCCATGAGAACTTTGACAACGTCTCAATGGGCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CAA 90 bp | GCGGATTCTGTCTTCAGGAGGGCTATGTTATTGCCCATTGAGACGTaGTCAAAGTTCTCATGGGGGATGATGGTATTGACTGAATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: ADSVFRRAMLLPIET*SKFSWGMMVLTEYS Trigger: AGAGTATTCAGTCAATACCATCATCCCCCATGAGAACTTTGACAACGTCTCAATGGGCAATAACATAGCCCTCCTGAAGACAGAATCCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | GTTGTCAAAGTTCTCATGGGGGATGATGGTATTGACTaGATACTCTCTGTGGTCAGTCTTTCGGGGATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VVKVLMGDDGID*ILSVVSLSGIH Trigger: ATGGATCCCCGAAAGACTGACCACAGAGAGTATTCAGTCAATACCATCATCCCCCATGAGAACTTTGACAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS TCA 72 bp | GAAAACGAATTCGTTGTCAGGGCAATATTTGATTCGTaGAAGGGGAGCTCAAAGACCAACTTCTCCCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ENEFVVRAIFDS*KGSSKTNFSQR Trigger: CCTCTGGGAGAAGTTGGTCTTTGAGCTCCCCTTTCACGAATCAAATATTGCCCTGACAACGAATTCGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||
| CDS CCA 72 bp | ATGTTATTGCCCATTGAGACGTTGTCAAAGTTCTCATaGGGGATGATGGTATTGACTGAATACTCTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: MLLPIETLSKFS*GMMVLTEYSLW Trigger: CCACAGAGAGTATTCAGTCAATACCATCATCCCCCATGAGAACTTTGACAACGTCTCAATGGGCAATAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052690.13 ENSMUST00000180075.2 ENSMUST00000213096.2 |
||