Pregenerated sensors for PRSS53 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044139Ensembl transcript IDs: ENSMUST00000121394.3, ENSMUST00000205300.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTaGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: AHSQPASQLLDLPQG*EPQDREGRGRSVEL Trigger: CAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR CCA 90 bp | AAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTaGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: KASLGRLILSQPASC*TCLRAGNHKTGRGG Trigger: CCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR TCA 90 bp | ATCTCTGTTGGAAAGCAGAACTTGGGGGCGGGGCCATGGCACACATaGAAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: ISVGKQNLGAGPWHT*KASLGRLILSQPAS Trigger: GCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTTTCATGTGTGCCATGGCCCCGCCCCCAAGTTCTGCTTTCCAACAGAGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| 3UTR CAA 90 bp | AAAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTaGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KSISGQAHSQPASQL*DLPQGWEPQDREGR Trigger: CCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR-3UTR TCA 90 bp | AGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTTGTAGAACTGGGTGTTaGCGTGGGAGTTGTCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: SISGQAHSQPASQLLDLPCRTGC*RGSCLA Trigger: CGCCAGACAACTCCCACGTCAACACCCAGTTCTACA...AGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR-3UTR TCA 90 bp | CATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAATGTAGAACTGGGTGTTaGCGTGGGAGTTGTCTGGCG | + |
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Preference number: 2 (lower is better) Translates to: HSQPASQLLDLPQGWEPQCRTGC*RGSCLA Trigger: CGCCAGACAACTCCCACGTCAACACCCAGTTCTACA...TTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR GCA 72 bp | AGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTaGCTCAGGGCTGGGAACCACAAGACCGGGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: RLILSQPASCWT*LRAGNHKTGRG Trigger: TCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR TCA 72 bp | CCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTaGCGTGGGAGTTGTCTGGCGTTTCTGGCGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PGGEGQECRTGC*RGSCLAFLASC Trigger: ACAGGACGCCAGAAACGCCAGACAACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| 3UTR TCA 72 bp | GGAAAGCAGAACTTGGGGGCGGGGCCATGGCACACATaGAAAGCATCTCTGGGCAGGCTCATTCTCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: GKQNLGAGPWHT*KASLGRLILSQ Trigger: CTGGCTGAGAATGAGCCTGCCCAGAGATGCTTTTCATGTGTGCCATGGCCCCGCCCCCAAGTTCTGCTTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| 3UTR CCA 72 bp | GAAGGATTGGCTAGGGAATACTGGAGACATCTCTGTTaGAAAGCAGAACTTGGGGGCGGGGCCATGGCACAC | + |
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Preference number: 3 (lower is better) Translates to: EGLAREYWRHLC*KAELGGGAMAH Trigger: GTGTGCCATGGCCCCGCCCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR CCA 90 bp | CTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGCCTTCCTGGGGCTCTaGAGGGCCAGGGCCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSQPASCWTCLRAGNHKTAFLGL*RARATL Trigger: CAGCGTGGCCCTGGCCCTCCAGAGCCCCAGGAAGGC...GGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | CCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGCATCCCAGGGCCACTaGGAGAGCGCTCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PQGWEPQDREGRGRSVELASQGH*ESAPAW Trigger: CCAGGCAGGAGCGCTCTCTCAGTGGCCCTGGGATGC...CAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGCGCCTCACACTGGCCTaGCAGGGCCATTCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: WTCLRAGNHKTGRGGAGVRLTLA*QGHSPG Trigger: ACCTGGTGAATGGCCCTGGCAGGCCAGTGTGAGGCG...CACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGCTGGCAGGATGGGGATaGCTGTGCCCCCAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QPASQLLDLPQGWEPQDRLAGWG*LCPQEL Trigger: CAGCTCCTGGGGGCACAGGCATCCCCATCCTGCCAG...CCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGCCATCCCTGGCAGGATaGGGATGCCTGTGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QPASQLLDLPQGWEPQDRPSLAG*GCLCPQ Trigger: CTGGGGGCACAGGCATCCCCATCCTGCCAGGGATGG...CCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | CCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGCATCCCAGGGCCACTaGGAGAGCGCTCCTGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PQDREGRGRSVELGVDVGASQGH*ESAPAW Trigger: CCAGGCAGGAGCGCTCTCTCAGTGGCCCTGGGATGC...TCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGTTGCCTTCCTGGGGCTCTaGAGGGCCAGGGCCACGCTG | + |
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Preference number: 4 (lower is better) Translates to: QDREGRGRSVELGVDVGVAFLGL*RARATL Trigger: CAGCGTGGCCCTGGCCCTCCAGAGCCCCAGGAAGGC...AACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | TGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGAATGTGTTGCCTTCCTaGGGCTCTGGAGGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: WTCLRAGNHKTGRGGAGVNVLPS*GSGGPG Trigger: CCCTGGCCCTCCAGAGCCCCAGGAAGGCAACACATT...CACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | TGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGCAAGCCAGCTTCCCGTaGTGCTTCAGCCTGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: WTCLRAGNHKTGRGGAGVQASFP*CFSLAS Trigger: GGATGCCAGGCTGAAGCACCACGGGAAGCTGGCTTG...CACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | GGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTCTGAGAGAGCGCTCCTaGCTGGGGTCCTGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: GLGTTRPGGEGQECRTGCLRERS*LGSCTP Trigger: AGGAGTGCAGGACCCCAGGCAGGAGCGCTCTCTCAG...ACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCTGGCAGGATGGGGATaGCTGTGCCCCCAGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SQPASQLLDLPQGWEPQDLAGWG*LCPQEL Trigger: CAGCTCCTGGGGGCACAGGCATCCCCATCCTGCCAG...GTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGCACCCACGACAGTGGTaGATACCATCCCTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: WTCLRAGNHKTGRGGAGVHPRQW*IPSLAG Trigger: TCCTGCCAGGGATGGTATGCACCACTGTCGTGGGTG...CACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | GTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGGAGCAGGGCCAGATCTaGTCCCTGGCTATAGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: VGPASGLGTTRPGGEGQEEQGQI*SLAIVV Trigger: AACCACTATAGCCAGGGATCAGATCTGGCCCTGCTC...CTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | AGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCGCCCGATAAAGCAGTaGGCAGCCGTCAGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: RLILSQPASCWTCLRAGNRPIKQ*AAVSTT Trigger: GGTGGTGCTGACGGCTGCTCACTGCTTTATCGGGCG...GTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | AGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACGGGCTCTGCCCCTCCTaGTTGAGAGAACCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: RLILSQPASCWTCLRAGNGLCPS*LREPRT Trigger: GGTCCTGGGTTCTCTCAAGCAGGAGGGGCAGAGCCC...GTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGTCCTGCCTGGGGTCCTaGACTCCTCAAGGAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PQGWEPQDREGRGRSVELSCLGS*TPQGAT Trigger: TGTGGCTCCTTGAGGAGTGCAGGACCCCAGGCAGGA...CAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACGGATGGGGATGCCTGTaGCCCCAGGAGCTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: LILSQPASCWTCLRAGNHGWGCL*PQELHA Trigger: AGCATGCAGCTCCTGGGGGCACAGGCATCCCCATCC...GTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | AGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCCATCCCTGGCAGGATaGGGATGCCTGTGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SISGQAHSQPASQLLDLPPSLAG*GCLCPQ Trigger: CTGGGGGCACAGGCATCCCCATCCTGCCAGGGATGG...AGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | CATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCACGCCCGATAAAGCAGTaGGCAGCCGTCAGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: HLWAGSFSASQPAVGPASRPIKQ*AAVSTT Trigger: GGTGGTGCTGACGGCTGCTCACTGCTTTATCGGGCG...TGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | TCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACACCCAATGTCACAGGCTaGGCCAGCAGCAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFSASQPAVGPASGLGTTPNVTG*ASSRKA Trigger: GGCCTTCCTGCTGCTGGCTCAGCCTGTGACATTGGG...TGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | AGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCCCAATGTCACAGGCTaGGCCAGCAGCAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: SISGQAHSQPASQLLDLPPNVTG*ASSRKA Trigger: GGCCTTCCTGCTGCTGGCTCAGCCTGTGACATTGGG...AGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGGGCTCTGCCCCTCCTaGTTGAGAGAACCCAGGACC | + |
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Preference number: 4 (lower is better) Translates to: HSQPASQLLDLPQGWEPQGLCPS*LREPRT Trigger: GGTCCTGGGTTCTCTCAAGCAGGAGGGGCAGAGCCC...TTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAATCAGCCCCCGGGCTCTaGCCCTCCTGCTTGAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HSQPASQLLDLPQGWEPQSAPGL*PSCLRE Trigger: TTCTCTCAAGCAGGAGGGGCAGAGCCCGGGGGCTGA...TTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACACTGAGAGAGCGCTCCTaGCTGGGGTCCTGCACTCCT | + |
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Preference number: 4 (lower is better) Translates to: SFSASQPAVGPASGLGTTLRERS*LGSCTP Trigger: AGGAGTGCAGGACCCCAGGCAGGAGCGCTCTCTCAG...TGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | GGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTCCCCCAGGAGCTGCATaGTGTCTGCTACAGGCCATC | + |
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Preference number: 4 (lower is better) Translates to: GWEPQDREGRGRSVELGVPPGAA*CLLQAI Trigger: GATGGCCTGTAGCAGACAGCATGCAGCTCCTGGGGG...AACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | AAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCGGATGGGGATGCCTGTaGCCCCAGGAGCTGCATGCT | + |
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Preference number: 4 (lower is better) Translates to: KHLWAGSFSASQPAVGPAGWGCL*PQELHA Trigger: AGCATGCAGCTCCTGGGGGCACAGGCATCCCCATCC...GGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | GGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCCACCCACGACAGTGGTaGATACCATCCCTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GSFSASQPAVGPASGLGTHPRQW*IPSLAG Trigger: TCCTGCCAGGGATGGTATGCACCACTGTCGTGGGTG...GGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | TCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTCTGGTCCCAGCCAGTaGCCCAGCAAGAAGCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SGLGTTRPGGEGQECRTGSGPSQ*PSKKLQ Trigger: TTGGAGCTTCTTGCTGGGCCACTGGCTGGGACCAGA...CCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGTTCGTGGTGCTTCAGCCTaGCATCCCAGGGCCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: QDREGRGRSVELGVDVGVRGASA*HPRATE Trigger: CTCAGTGGCCCTGGGATGCCAGGCTGAAGCACCACG...AACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | GAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGTTGTCTGGCGTCGTGGTGCTTCAGCCTaGCATCCCAGGGCCACTGAG | + |
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Preference number: 4 (lower is better) Translates to: EGRGRSVELGVDVGVVWRRGASA*HPRATE Trigger: CTCAGTGGCCCTGGGATGCCAGGCTGAAGCACCACG...ACGCCAGACAACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | TCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGGGAACCATGTGCCCCTaGTCTCATGTACAAGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: SGLGTTRPGGEGQECRTGGTMCP*SHVQVA Trigger: CGCCACTTGTACATGAGATCAGGGGCACATGGTTCC...CCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR GCA 90 bp | AGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGGCATGCACGCTGAGCTaGTTGAAGACCCTCTATCAC | + |
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Preference number: 4 (lower is better) Translates to: SQPASCWTCLRAGNHKTGACTLS*LKTLYH Trigger: GTGATAGAGGGTCTTCAAGCAGCTCAGCGTGCATGC...CCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCCACCAGGTAATGTGTTaGCTTCCTGGGGCTCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSQPASCWTCLRAGNHKTHQVMC*LPGALE Trigger: CTCCAGAGCCCCAGGAAGGCAACACATTACCTGGTG...GGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGCCACCAAGGAGCCACTaGAGATGTGTACACCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PQGWEPQDREGRGRSVELPPRSH*RCVHPV Trigger: GACAGGGTGTACACATCTGCAGTGGCTCCTTGGTGG...CAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | AAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCTCAGCCCCCGGGCTCTaGCCCTCCTGCTTGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KASLGRLILSQPASCWTCSAPGL*PSCLRE Trigger: TTCTCTCAAGCAGGAGGGGCAGAGCCCGGGGGCTGA...GCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACATCCTGCCTGGGGTCCTaGACTCCTCAAGGAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSASQPAVGPASGLGTTSCLGS*TPQGAT Trigger: TGTGGCTCCTTGAGGAGTGCAGGACCCCAGGCAGGA...TGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | GTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGGTAGGCAGAGAGTGCTaGAAAAACTGCAGGCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPASGLGTTRPGGEGQEVGREC*KNCRLC Trigger: GCAAAGCCTGCAGTTTTTGCAGCACTCTCTGCCTAC...CTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR CCA 90 bp | AGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTAATGTGTTGCCTTCCTaGGGCTCTGGAGGGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: SISGQAHSQPASQLLDLPNVLPS*GSGGPG Trigger: CCCTGGCCCTCCAGAGCCCCAGGAAGGCAACACATT...AGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGTTAGGGGAAGTGGTAGGTaGGTTGGGGCAAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QDREGRGRSVELGVDVGVRGSGR*VGASRG Trigger: CCCTCTGCTTGCCCCAACCCACCTACCACTTCCCCT...AACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGATCTGGTCCCAGCCAGTaGCCCAGCAAGAAGCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQDREGRGRSVELGVDVGSGPSQ*PSKKLQ Trigger: TTGGAGCTTCTTGCTGGGCCACTGGCTGGGACCAGA...TCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | GGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTCTCAGCCTCAGGCTCTaGCTCCTCAGCGAAGTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWEPQDREGRGRSVELGVLSLRL*LLSEVD Trigger: GTCTACTTCGCTGAGGAGCCAGAGCCTGAGGCTGAG...AACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR TCA 90 bp | CTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACGAGCAGGGCCAGATCTaGTCCCTGGCTATAGTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LILSQPASCWTCLRAGNHEQGQI*SLAIVV Trigger: AACCACTATAGCCAGGGATCAGATCTGGCCCTGCTC...GTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | CATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAAGGCCCCGTGCAGAATaGGTTGCTTCAGGCCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: HLWAGSFSASQPAVGPASRPRAE*VASGPI Trigger: AATGGGGCCTGAAGCAACTCATTCTGCACGGGGCCT...TGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | GGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTCATCTTCACAACTCCTaGGGCCTGCACCAAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGTTRPGGEGQECRTGCHLHNS*GLHQES Trigger: GCTTTCTTGGTGCAGGCCCCAGGAGTTGTGAAGATG...ACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCACAACAACTGGCTGGTTaGCCTCACAGTGAGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLWAGSFSASQPAVGPASQQLAG*PHSEGA Trigger: AGCCCCCTCACTGTGAGGCCAACCAGCCAGTTGTTG...TGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTTCACCAGTCAACAACTaGCTGGTTGGCCTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QGWEPQDREGRGRSVELGSPVNN*LVGLTV Trigger: CACTGTGAGGCCAACCAGCCAGTTGTTGACTGGTGA...ACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | AGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTATGGGCCTGCAGCCATaGACTGTGTACTGCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SISGQAHSQPASQLLDLPMGLQP*TVYCHV Trigger: GACATGGCAGTACACAGTTCATGGCTGCAGGCCCAT...AGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | CCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGCATGCACGCTGAGCTaGTTGAAGACCCTCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQDREGRGRSVELGVDVGACTLS*LKTLYH Trigger: GTGATAGAGGGTCTTCAAGCAGCTCAGCGTGCATGC...TCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | GAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGCACCAGGTAATGTGTTaGCTTCCTGGGGCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPQDREGRGRSVELGVDVHQVMC*LPGALE Trigger: CTCCAGAGCCCCAGGAAGGCAACACATTACCTGGTG...CACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | ATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGCCACCAAGGAGCCACTaGAGATGTGTACACCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISGQAHSQPASQLLDLPQPPRSH*RCVHPV Trigger: GACAGGGTGTACACATCTGCAGTGGCTCCTTGGTGG...CTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | AGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGGAGTGCTGCAAAAACTaGAGGCTTTGCAGAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQPASCWTCLRAGNHKTGECCKN*RLCRAL Trigger: CAAAGCTCTGCAAAGCCTGCAGTTTTTGCAGCACTC...CCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR GCA 90 bp | CCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGCTCGTAGGCAGAGAGTaGTGCAAAAACTGCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQGWEPQDREGRGRSVELLVGRE*CKNCRL Trigger: AAGCCTGCAGTTTTTGCAGCACTCTCTGCCTACGAG...CAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR CCA 90 bp | AGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACAGTGGTTATAGGCCTTaGGCAACTGCAGGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RLILSQPASCWTCLRAGNSGYRP*ATAGQQ Trigger: TTGCTGCCCTGCAGTTGCCCAAGGCCTATAACCACT...GTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | GTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGACAGGGGTGTCCTCTTaGGCACATTTTGATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGPASGLGTTRPGGEGQETGVSS*AHFDVK Trigger: TTTCACATCAAAATGTGCCCAAGAGGACACCCCTGT...CTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGACATCTTCACAACTCCTaGGGCCTGCACCAAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQDREGRGRSVELGVDVGHLHNS*GLHQES Trigger: GCTTTCTTGGTGCAGGCCCCAGGAGTTGTGAAGATG...TCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | AAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCGATCTCATGTACAAGTaGCGCCCCAGAGAGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KASLGRLILSQPASCWTCDLMYK*RPREAL Trigger: GAGGGCCTCTCTGGGGCGCCACTTGTACATGAGATC...GCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR GCA 90 bp | AGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCCGTGCAGAATGAGTTaGTTCAGGCCCCATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SISGQAHSQPASQLLDLPPCRMS*FRPHSS Trigger: AGAGGAATGGGGCCTGAAGCAACTCATTCTGCACGG...AGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | ATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGCCGTGCAGAATGAGTTaGTTCAGGCCCCATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISGQAHSQPASQLLDLPQPCRMS*FRPHSS Trigger: AGAGGAATGGGGCCTGAAGCAACTCATTCTGCACGG...CTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | AAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCATCCCAGGTCTTGCTaGGTTGGACAGCAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KASLGRLILSQPASCWTCHPRSC*VGQQPL Trigger: CAGAGGTTGCTGTCCAACCCAGCAAGACCTGGGATG...GCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | CTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACCTAATGATTCCAACCTaGACCCAGTGTCCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LILSQPASCWTCLRAGNHLMIPT*TQCPSG Trigger: GCCTGATGGACACTGGGTCCAGGTTGGAATCATTAG...GTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | GTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGCTCTTGGGCACATTTTaGTGTGAAACTAATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VGPASGLGTTRPGGEGQELLGTF*CETNDS Trigger: GGAATCATTAGTTTCACATCAAAATGTGCCCAAGAG...CTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | AGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCCAGGAGCTCAGTTCTaGTGTGGCCATCTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLILSQPASCWTCLRAGNPGAQF*CGHLFK Trigger: TTTGAAAAGATGGCCACAGCAGAACTGAGCTCCTGG...GTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCCAGGAGCTCAGTTCTaGTGTGGCCATCTTTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQPASQLLDLPQGWEPQDPGAQF*CGHLFK Trigger: TTTGAAAAGATGGCCACAGCAGAACTGAGCTCCTGG...GTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | TCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGAAAAACTGCAGGCTTTaGAGAGCTTTGACAGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLGTTRPGGEGQECRTGKNCRL*RALTGV Trigger: GACACCTGTCAAAGCTCTGCAAAGCCTGCAGTTTTT...CCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR CCA 90 bp | GAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGTTGTCTGGCGTCTAATGATTCCAACCTaGACCCAGTGTCCATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGRSVELGVDVGVVWRLMIPT*TQCPSG Trigger: GCCTGATGGACACTGGGTCCAGGTTGGAATCATTAG...ACGCCAGACAACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CCA 90 bp | AATACTGGAGACATCTCTGTTGGAAAGCAGAACTTGGGGGCGGGGCCATGGCACCATCCCAGGTCTTGCTaGGTTGGACAGCAACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGDISVGKQNLGAGPWHHPRSC*VGQQPL Trigger: CAGAGGTTGCTGTCCAACCCAGCAAGACCTGGGATG...GTGCCATGGCCCCGCCCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR CCA 90 bp | CCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAACAGGGGTGTCCTCTTaGGCACATTTTGATGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQDREGRGRSVELGVDVGTGVSS*AHFDVK Trigger: TTTCACATCAAAATGTGCCCAAGAGGACACCCCTGT...TCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR GCA 90 bp | AAGGATTGGCTAGGGAATACTGGAGACATCTCTGTTGGAAAGCAGAACTTGGGGCCCCCAGGAGCTGCATaGTGTCTGCTACAGGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KDWLGNTGDISVGKQNLGPPGAA*CLLQAI Trigger: GATGGCCTGTAGCAGACAGCATGCAGCTCCTGGGGG...CCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR CCA 90 bp | AAGGATTGGCTAGGGAATACTGGAGACATCTCTGTTGGAAAGCAGAACTTGGGGAGGGGAAGTGGTAGGTaGGTTGGGGCAAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KDWLGNTGDISVGKQNLGRGSGR*VGASRG Trigger: CCCTCTGCTTGCCCCAACCCACCTACCACTTCCCCT...CCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR TCA 90 bp | GAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTGACGTGGGAGTTGTCTGGCGTCTCTTGGGCACATTTTaGTGTGAAACTAATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGRGRSVELGVDVGVVWRLLGTF*CETNDS Trigger: GGAATCATTAGTTTCACATCAAAATGTGCCCAAGAG...ACGCCAGACAACTCCCACGTCAACACCCAGTTCTACACTCCTGCCCCTCCCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR TCA 90 bp | GGATTGGCTAGGGAATACTGGAGACATCTCTGTTGGAAAGCAGAACTTGGGGGCGGCTTTGCAGAGCTTTaGCAGGTGTCTCCAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLAREYWRHLCWKAELGGGFAEL*QVSPKL Trigger: CAGCTTTGGAGACACCTGTCAAAGCTCTGCAAAGCC...GCCCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS-3UTR GCA 90 bp | GGATTGGCTAGGGAATACTGGAGACATCTCTGTTGGAAAGCAGAACTTGGGGGCGTGTCTCCAAAGCTGTaGAGTCCAACCAGGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GLAREYWRHLCWKAELGGVSPKL*SPTRNH Trigger: ATGGTTCCTGGTTGGACTGCACAGCTTTGGAGACAC...GCCCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| 3UTR CAA 72 bp | TTCACAACAGCTACTGGTGTGGTTATATCTGAAGGATaGGCTAGGGAATACTGGAGACATCTCTGTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FTTATGVVISEG*AREYWRHLCWK Trigger: TTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCCTTCAGATATAACCACACCAGTAGCTGTTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
||
| CDS-3UTR CAA 90 bp | TGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGCTCTGCCCCTCCTGCTaGAGAGAACCCAGGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: WTCLRAGNHKTGRGGAGVLCPSC*REPRTT Trigger: CGTGGTCCTGGGTTCTCTCAAGCAGGAGGGGCAGAG...CACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS TCA 90 bp | CAAGCCAGCTTCCCGTGGTGCTTCAGCCTGGCATCCCAGGGCCACTaGGAGAGCGCTCCTGCCTGGGGTCCTGCACTCCTCAAGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QASFPWCFSLASQGH*ESAPAWGPALLKEP Trigger: TGGCTCCTTGAGGAGTGCAGGACCCCAGGCAGGAGCGCTCTCTCAGTGGCCCTGGGATGCCAGGCTGAAGCACCACGGGAAGCTGGCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS CCA 90 bp | ATACCAGAGCTCCACCACAAGCCAGCTTCCCGTGGTGCTTCAGCCTaGCATCCCAGGGCCACTGAGAGAGCGCTCCTGCCTGGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPELHHKPASRGASA*HPRATERALLPGVL Trigger: CAGGACCCCAGGCAGGAGCGCTCTCTCAGTGGCCCTGGGATGCCAGGCTGAAGCACCACGGGAAGCTGGCTTGTGGTGGAGCTCTGGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTCACCAGGTAATGTGTaGCCTTCCTGGGGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGPASGLGTTRPGGEGQESPGNV*PSWGSG Trigger: TCCAGAGCCCCAGGAAGGCAACACATTACCTGGTGA...CTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTCTCTGCCCCTCCTGCTaGAGAGAACCCAGGACCACG | + |
|
Preference number: 5 (lower is better) Translates to: GWEPQDREGRGRSVELGVLCPSC*REPRTT Trigger: CGTGGTCCTGGGTTCTCTCAAGCAGGAGGGGCAGAG...AACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | CATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGGGGCAAGCAGAGGGTaGTCTGAACGGTGGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSQPASQLLDLPQGWEPQGASRG*SERWGG Trigger: CCCACCCCACCGTTCAGACAACCCTCTGCTTGCCCC...TTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CAA 90 bp | CTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCCCAGGTCTTGCTGGGTaGGACAGCAACCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQPASCWTCLRAGNHKTPGLAG*DSNLWC Trigger: GCACCAGAGGTTGCTGTCCAACCCAGCAAGACCTGG...GGTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS CCA 90 bp | CACAGGCTGAGCCAGCAGCAGGAAGGCCACATCATAGCCGCCTTCTaGGTGGGTGTAGGCCCCGTGCAGAATGAGTTGCTTCAGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HRLSQQQEGHIIAAF*VGVGPVQNELLQAP Trigger: TGGGGCCTGAAGCAACTCATTCTGCACGGGGCCTACACCCACCCAGAAGGCGGCTATGATGTGGCCTTCCTGCTGCTGGCTCAGCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CAA 90 bp | GGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCGAAGTGGTAGGTGGGTaGGGGCAAGCAGAGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: GSFSASQPAVGPASGLGTEVVGG*GQAEGC Trigger: ACAACCCTCTGCTTGCCCCAACCCACCTACCACTTC...GGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTAGAGCATCCCAGGTCTaGCTGGGTTGGACAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: QGWEPQDREGRGRSVELGRASQV*LGWTAT Trigger: GGTTGCTGTCCAACCCAGCAAGACCTGGGATGCTCT...ACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | AGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACGAAGTGGTAGGTGGGTaGGGGCAAGCAGAGGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLILSQPASCWTCLRAGNEVVGG*GQAEGC Trigger: ACAACCCTCTGCTTGCCCCAACCCACCTACCACTTC...GTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | AAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCCCAGGTCTTGCTGGGTaGGACAGCAACCTCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KHLWAGSFSASQPAVGPAPGLAG*DSNLWC Trigger: GCACCAGAGGTTGCTGTCCAACCCAGCAAGACCTGG...GGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAGACCCCGTGCAGAATGAGTaGCTTCAGGCCCCATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SQPASQLLDLPQGWEPQDPVQNE*LQAPFL Trigger: GAGGAATGGGGCCTGAAGCAACTCATTCTGCACGGG...GTCTTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGAACCACAAGACCGGGAGGGGAGGGGCAGGAGTGTAGAACTGGGTGTTCCCGTGCAGAATGAGTaGCTTCAGGCCCCATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GWEPQDREGRGRSVELGVPVQNE*LQAPFL Trigger: GAGGAATGGGGCCTGAAGCAACTCATTCTGCACGGG...AACACCCAGTTCTACACTCCTGCCCCTCCCCTCCCGGTCTTGTGGTTCCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS GCA 90 bp | AGAGAGCGCTCCTGCCTGGGGTCCTGCACTCCTCAAGGAGCCACATaGTACACAGCTGTTCTCGTCGCTCATCTTCACAACTCCTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RERSCLGSCTPQGAT*YTAVLVAHLHNSWG Trigger: GCCCCAGGAGTTGTGAAGATGAGCGACGAGAACAGCTGTGTAGCATGTGGCTCCTTGAGGAGTGCAGGACCCCAGGCAGGAGCGCTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | CATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCCTCAGGGCTGGGAACCACAAAGAGCATCCCAGGTCTaGCTGGGTTGGACAGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: HSQPASQLLDLPQGWEPQRASQV*LGWTAT Trigger: GGTTGCTGTCCAACCCAGCAAGACCTGGGATGCTCT...TTGTGGTTCCCAGCCCTGAGGCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS TCA 90 bp | AGTCCTACGCTCCATTCCTCTAGGGTTTGGCGCCCGATAAAGCAGTaGGCAGCCGTCAGCACCACCACCTCCGATACCAGAGCTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SPTLHSSRVWRPIKQ*AAVSTTTSDTRAPP Trigger: TGGTGGAGCTCTGGTATCGGAGGTGGTGGTGCTGACGGCTGCTCACTGCTTTATCGGGCGCCAAACCCTAGAGGAATGGAGCGTAGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS CCA 90 bp | CGGAGGCGCAGATTCCGTAGGGTTCTGGAAACATCACTGGTGTTCTaGTCCCAGCCAGTGGCCCAGCAAGAAGCTCCAAAGGGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRRRFRRVLETSLVF*SQPVAQQEAPKGKW Trigger: CCACTTCCCCTTTGGAGCTTCTTGCTGGGCCACTGGCTGGGACCAGAACACCAGTGATGTTTCCAGAACCCTACGGAATCTGCGCCTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS TCA 90 bp | GGCCTGCACCAAGAAAGCTGCCTCGTGAACATGGGCCTGCAGCCATaGACTGTGTACTGCCATGTCAGTCAACAGCACAGGGGTGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GLHQESCLVNMGLQP*TVYCHVSQQHRGVL Trigger: GAGGACACCCCTGTGCTGTTGACTGACATGGCAGTACACAGTTCATGGCTGCAGGCCCATGTTCACGAGGCAGCTTTCTTGGTGCAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS TCA 90 bp | AGGTGTCTCCAAAGCTGTGCAGTCCAACCAGGAACCATGTGCCCCTaGTCTCATGTACAAGTGGCGCCCCAGAGAGGCCCTCACAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RCLQSCAVQPGTMCP*SHVQVAPQRGPHSE Trigger: CTCACTGTGAGGGCCTCTCTGGGGCGCCACTTGTACATGAGATCAGGGGCACATGGTTCCTGGTTGGACTGCACAGCTTTGGAGACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS CCA 90 bp | GCCACATGCTACACAGCTGTTCTCGTCGCTCATCTTCACAACTCCTaGGGCCTGCACCAAGAAAGCTGCCTCGTGAACATGGGCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ATCYTAVLVAHLHNS*GLHQESCLVNMGLQ Trigger: CTGCAGGCCCATGTTCACGAGGCAGCTTTCTTGGTGCAGGCCCCAGGAGTTGTGAAGATGAGCGACGAGAACAGCTGTGTAGCATGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCATCTCTGGGCAGGCTCATTCTCAGCCAGCCAGCCAGCTGTTGGACCTGCTCACCAGGTAATGTGTaGCCTTCCTGGGGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KASLGRLILSQPASCWTCSPGNV*PSWGSG Trigger: TCCAGAGCCCCAGGAAGGCAACACATTACCTGGTGA...GCAGGTCCAACAGCTGGCTGGCTGGCTGAGAATGAGCCTGCCCAGAGATGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS TCA 90 bp | CTCATCTTCACAACTCCTGGGGCCTGCACCAAGAAAGCTGCCTCGTaGACATGGGCCTGCAGCCATGAACTGTGTACTGCCATGTCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIFTTPGACTKKAAS*TWACSHELCTAMSV Trigger: GACTGACATGGCAGTACACAGTTCATGGCTGCAGGCCCATGTTCACGAGGCAGCTTTCTTGGTGCAGGCCCCAGGAGTTGTGAAGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS TCA 90 bp | CAGGCTCTGGCTCCTCAGCGAAGTAGACCTGCCAGTCTAGATTGCTaGTCCAGTCCTCGTAGGCAGAGAGTGCTGCAAAAACTGCAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QALAPQRSRPASLDC*SSPRRQRVLQKLQA Trigger: AGCCTGCAGTTTTTGCAGCACTCTCTGCCTACGAGGACTGGATCAGCAATCTAGACTGGCAGGTCTACTTCGCTGAGGAGCCAGAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
||
| CDS CCA 90 bp | GTGTCCTCTTGGGCACATTTTGATGTGAAACTAATGATTCCAACCTaGACCCAGTGTCCATCAGGCTCACGGCACATCACAGGTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSSWAHFDVKLMIPT*TQCPSGSRHITGPP Trigger: TGGGGGACCTGTGATGTGCCGTGAGCCTGATGGACACTGGGTCCAGGTTGGAATCATTAGTTTCACATCAAAATGTGCCCAAGAGGACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS-3UTR CAA 90 bp | GGATTGGCTAGGGAATACTGGAGACATCTCTGTTGGAAAGCAGAACTTGGGGGCAGGCTTTGCAGAGCTTaGACAGGTGTCTCCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLAREYWRHLCWKAELGGRLCRA*TGVSKA Trigger: AGCTTTGGAGACACCTGTCAAAGCTCTGCAAAGCCT...GCCCCCAAGTTCTGCTTTCCAACAGAGATGTCTCCAGTATTCCCTAGCCAATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS TCA 90 bp | TGCCATGTCAGTCAACAGCACAGGGGTGTCCTCTTGGGCACATTTTaGTGTGAAACTAATGATTCCAACCTGGACCCAGTGTCCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CHVSQQHRGVLLGTF*CETNDSNLDPVSIR Trigger: CCTGATGGACACTGGGTCCAGGTTGGAATCATTAGTTTCACATCAAAATGTGCCCAAGAGGACACCCCTGTGCTGTTGACTGACATGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CCA 90 bp | GAACTGTGTACTGCCATGTCAGTCAACAGCACAGGGGTGTCCTCTTaGGCACATTTTGATGTGAAACTAATGATTCCAACCTGGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ELCTAMSVNSTGVSS*AHFDVKLMIPTWTQ Trigger: CTGGGTCCAGGTTGGAATCATTAGTTTCACATCAAAATGTGCCCAAGAGGACACCCCTGTGCTGTTGACTGACATGGCAGTACACAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS GCA 72 bp | CTGGGGCTCTGGAGGGCCAGGGCCACGCTGCCCGCATaGACGCTGAGCTGCTTGAAGACCCTCTATCACGAC | + |
|
Preference number: 6 (lower is better) Translates to: LGLWRARATLPA*TLSCLKTLYHD Trigger: GTCGTGATAGAGGGTCTTCAAGCAGCTCAGCGTGCATGCGGGCAGCGTGGCCCTGGCCCTCCAGAGCCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CAA 90 bp | TGTCGCCTCACACTGGCCTGCCAGGGCCATTCACCAGGTAATGTGTaGCCTTCCTGGGGCTCTGGAGGGCCAGGGCCACGCTGCCCGCAT | + |
|
Preference number: 6 (lower is better) Translates to: CRLTLACQGHSPGNV*PSWGSGGPGPRCPH Trigger: ATGCGGGCAGCGTGGCCCTGGCCCTCCAGAGCCCCAGGAAGGCAACACATTACCTGGTGAATGGCCCTGGCAGGCCAGTGTGAGGCGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS GCA 72 bp | AGGGCCAGGGCCACGCTGCCCGCATGCACGCTGAGCTaGTTGAAGACCCTCTATCACGACCACAGCTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: RARATLPACTLS*LKTLYHDHSSH Trigger: GTGGGAGCTGTGGTCGTGATAGAGGGTCTTCAAGCAGCTCAGCGTGCATGCGGGCAGCGTGGCCCTGGCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CCA 72 bp | CTCCACCACAAGCCAGCTTCCCGTGGTGCTTCAGCCTaGCATCCCAGGGCCACTGAGAGAGCGCTCCTGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHHKPASRGASA*HPRATERALLP Trigger: AGGCAGGAGCGCTCTCTCAGTGGCCCTGGGATGCCAGGCTGAAGCACCACGGGAAGCTGGCTTGTGGTGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS TCA 72 bp | AGCCGCCTTCTGGGTGGGTGTAGGCCCCGTGCAGAATaGGTTGCTTCAGGCCCCATTCCTCTGGTCCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SRLLGGCRPRAE*VASGPIPLVQP Trigger: GGGCTGGACCAGAGGAATGGGGCCTGAAGCAACTCATTCTGCACGGGGCCTACACCCACCCAGAAGGCGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CAA 90 bp | CTCTGGAGGGCCAGGGCCACGCTGCCCGCATGCACGCTGAGCTGCTaGAAGACCCTCTATCACGACCACAGCTCCCACAATAAGCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LWRARATLPACTLSC*KTLYHDHSSHNKQL Trigger: GAGCTGCTTATTGTGGGAGCTGTGGTCGTGATAGAGGGTCTTCAAGCAGCTCAGCGTGCATGCGGGCAGCGTGGCCCTGGCCCTCCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS TCA 72 bp | GGGGCAAGCAGAGGGTTGTCTGAACGGTGGGGTGGGTaGGCTGGAGCAGGGCCAGATCTGATCCCTGGCTAT | + |
|
Preference number: 6 (lower is better) Translates to: GASRGLSERWGG*AGAGPDLIPGY Trigger: ATAGCCAGGGATCAGATCTGGCCCTGCTCCAGCTCACCCACCCCACCGTTCAGACAACCCTCTGCTTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CAA 72 bp | GCCAGGGCCACGCTGCCCGCATGCACGCTGAGCTGCTaGAAGACCCTCTATCACGACCACAGCTCCCACAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARATLPACTLSC*KTLYHDHSSHN Trigger: ATTGTGGGAGCTGTGGTCGTGATAGAGGGTCTTCAAGCAGCTCAGCGTGCATGCGGGCAGCGTGGCCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CCA 72 bp | AGCCAGCAGCAGGAAGGCCACATCATAGCCGCCTTCTaGGTGGGTGTAGGCCCCGTGCAGAATGAGTTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SQQQEGHIIAAF*VGVGPVQNELL Trigger: AAGCAACTCATTCTGCACGGGGCCTACACCCACCCAGAAGGCGGCTATGATGTGGCCTTCCTGCTGCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS TCA 72 bp | CAAAGCTGTGCAGTCCAACCAGGAACCATGTGCCCCTaGTCTCATGTACAAGTGGCGCCCCAGAGAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: QSCAVQPGTMCP*SHVQVAPQRGP Trigger: AGGGCCTCTCTGGGGCGCCACTTGTACATGAGATCAGGGGCACATGGTTCCTGGTTGGACTGCACAGCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS GCA 72 bp | CTGCAGATGTGTACACCCTGTCGCCTCACACTGGCCTaGCAGGGCCATTCACCAGGTAATGTGTTGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQMCTPCRLTLA*QGHSPGNVLPS Trigger: GGAAGGCAACACATTACCTGGTGAATGGCCCTGGCAGGCCAGTGTGAGGCGACAGGGTGTACACATCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CCA 72 bp | GGAGGCGCAGATTCCGTAGGGTTCTGGAAACATCACTaGTGTTCTGGTCCCAGCCAGTGGCCCAGCAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GGADSVGFWKHH*CSGPSQWPSKK Trigger: CTTCTTGCTGGGCCACTGGCTGGGACCAGAACACCAGTGATGTTTCCAGAACCCTACGGAATCTGCGCCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CCA 72 bp | GTGCACCCCCACAGAGCATCCCAGGTCTTGCTGGGTTaGACAGCAACCTCTGGTGCAACCGATTGTAGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VHPHRASQVLLG*TATSGATDCRD Trigger: GTCTCTACAATCGGTTGCACCAGAGGTTGCTGTCCAACCCAGCAAGACCTGGGATGCTCTGTGGGGGTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS CCA 72 bp | AGGCTGTGCACCCCCACAGAGCATCCCAGGTCTTGCTaGGTTGGACAGCAACCTCTGGTGCAACCGATTGTA | + |
|
Preference number: 6 (lower is better) Translates to: RLCTPTEHPRSC*VGQQPLVQPIV Trigger: TACAATCGGTTGCACCAGAGGTTGCTGTCCAACCCAGCAAGACCTGGGATGCTCTGTGGGGGTGCACAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS GCA 72 bp | TCCTGCCTGGGGTCCTGCACTCCTCAAGGAGCCACATaGTACACAGCTGTTCTCGTCGCTCATCTTCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: SCLGSCTPQGAT*YTAVLVAHLHN Trigger: GTTGTGAAGATGAGCGACGAGAACAGCTGTGTAGCATGTGGCTCCTTGAGGAGTGCAGGACCCCAGGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CAA 90 bp | CAGGACTGTCACAGGTACTGTCTGGGGGTAGTTGATGCCTGCTTTTaGGGTCAGCCCAAGAACCCAGCCATGTTCACCATCAGGCAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QDCHRYCLGVVDACF*GQPKNPAMFTIRQV Trigger: CACCTGCCTGATGGTGAACATGGCTGGGTTCTTGGGCTGACCCAAAAAGCAGGCATCAACTACCCCCAGACAGTACCTGTGACAGTCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS GCA 72 bp | GAGAGAACCCAGGACCACGGACCAGGAGCTCAGTTCTaGTGTGGCCATCTTTTCAAAGCAGTGAGCAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ERTQDHGPGAQF*CGHLFKAVSSC Trigger: ACAGCTGCTCACTGCTTTGAAAAGATGGCCACAGCAGAACTGAGCTCCTGGTCCGTGGTCCTGGGTTCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS TCA 72 bp | CAAGAAAGCTGCCTCGTGAACATGGGCCTGCAGCCATaGACTGTGTACTGCCATGTCAGTCAACAGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: QESCLVNMGLQP*TVYCHVSQQHR Trigger: CCTGTGCTGTTGACTGACATGGCAGTACACAGTTCATGGCTGCAGGCCCATGTTCACGAGGCAGCTTTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS GCA 72 bp | GACTGTCACAGGTACTGTCTGGGGGTAGTTGATGCCTaGTTTTTGGGTCAGCCCAAGAACCCAGCCATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: DCHRYCLGVVDA*FLGQPKNPAMF Trigger: GAACATGGCTGGGTTCTTGGGCTGACCCAAAAAGCAGGCATCAACTACCCCCAGACAGTACCTGTGACAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS CAA 72 bp | CACAGGTACTGTCTGGGGGTAGTTGATGCCTGCTTTTaGGGTCAGCCCAAGAACCCAGCCATGTTCACCATC | + |
|
Preference number: 6 (lower is better) Translates to: HRYCLGVVDACF*GQPKNPAMFTI Trigger: GATGGTGAACATGGCTGGGTTCTTGGGCTGACCCAAAAAGCAGGCATCAACTACCCCCAGACAGTACCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
||
| CDS TCA 72 bp | GCTCCTCAGCGAAGTAGACCTGCCAGTCTAGATTGCTaGTCCAGTCCTCGTAGGCAGAGAGTGCTGCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: APQRSRPASLDC*SSPRRQRVLQK Trigger: TTTTTGCAGCACTCTCTGCCTACGAGGACTGGATCAGCAATCTAGACTGGCAGGTCTACTTCGCTGAGGAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
||
| CDS CAA 90 bp | CTCGTAGGCAGAGAGTGCTGCAAAAACTGCAGGCTTTGCAGAGCTTaGACAGGTGTCTCCAAAGCTGTGCAGTCCAACCAGGAACCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LVGRECCKNCRLCRA*TGVSKAVQSNQEPC Trigger: ACATGGTTCCTGGTTGGACTGCACAGCTTTGGAGACACCTGTCAAAGCTCTGCAAAGCCTGCAGTTTTTGCAGCACTCTCTGCCTACGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS GCA 72 bp | GATCCAGTCCTCGTAGGCAGAGAGTGCTGCAAAAACTaGAGGCTTTGCAGAGCTTTGACAGGTGTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: DPVLVGRECCKN*RLCRALTGVSK Trigger: TTTGGAGACACCTGTCAAAGCTCTGCAAAGCCTGCAGTTTTTGCAGCACTCTCTGCCTACGAGGACTGGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121394.3 |
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| CDS TCA 72 bp | AGTCAACAGCACAGGGGTGTCCTCTTGGGCACATTTTaGTGTGAAACTAATGATTCCAACCTGGACCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SQQHRGVLLGTF*CETNDSNLDPV Trigger: CACTGGGTCCAGGTTGGAATCATTAGTTTCACATCAAAATGTGCCCAAGAGGACACCCCTGTGCTGTTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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| CDS CCA 72 bp | ACTGCCATGTCAGTCAACAGCACAGGGGTGTCCTCTTaGGCACATTTTGATGTGAAACTAATGATTCCAACC | + |
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Preference number: 6 (lower is better) Translates to: TAMSVNSTGVSS*AHFDVKLMIPT Trigger: GGTTGGAATCATTAGTTTCACATCAAAATGTGCCCAAGAGGACACCCCTGTGCTGTTGACTGACATGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121394.3 ENSMUST00000205300.2 |
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