Pregenerated sensors for PRSS52 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021966

Ensembl transcript IDs: ENSMUST00000022537.6

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGGCATCCTTCCCAGGATCTTGAGTCCCAGCACACAGCATATTCTTaGTTAATAGAGACAAAATATAGCCACACCAATCCCATCTGTACA	+
Preference number: 5 (lower is better) Translates to: RHPSQDLESQHTAYS*LIETKYSHTNPICT Trigger: TGTACAGATGGGATTGGTGTGGCTATATTTTGTCTCTATTAACCAAGAATATGCTGTGTGCTGGGACTCAAGATCCTGGGAAGGATGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 72 bp	CCCACATGCCAGGGGAACTCCAAGATGTTTGCAGGTTaGCCTCCCACGATAGCAGAAGCAGGTTTGCCTTCC	+
Preference number: 6 (lower is better) Translates to: PTCQGNSKMFAG*PPTIAEAGLPS Trigger: GGAAGGCAAACCTGCTTCTGCTATCGTGGGAGGCAAACCTGCAAACATCTTGGAGTTCCCCTGGCATGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 90 bp	CAGCTGACAATGCCCACCTGGTACCAAATGGCTGTGTTTCTCTTTTaGTTGCAAACGAGAGCTCCTCCACTGTCGCCCTGGCAGGCATCC	+
Preference number: 6 (lower is better) Translates to: QLTMPTWYQMAVFLF*LQTRAPPLSPWQAS Trigger: GGATGCCTGCCAGGGCGACAGTGGAGGAGCTCTCGTTTGCAACAAAAAGAGAAACACAGCCATTTGGTACCAGGTGGGCATTGTCAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 90 bp	CCCACGATAGCAGAAGCAGGTTTGCCTTCCACGATAGCAGAAGCATaGTTAAGTTGTTGGGATCTGCTACTCATTCGCCGGCCACATACC	+
Preference number: 6 (lower is better) Translates to: PTIAEAGLPSTIAEA*LSCWDLLLIRRPHT Trigger: GGTATGTGGCCGGCGAATGAGTAGCAGATCCCAACAACTTAACAATGCTTCTGCTATCGTGGAAGGCAAACCTGCTTCTGCTATCGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS TCA 72 bp	ACATATAAGGCCTCCCCGCCTTCGCTGTCTGCTTGCTaGTCCACCTCACATAGTGTGACACCTTGGTGTATA	+
Preference number: 6 (lower is better) Translates to: TYKASPPSLSAC*STSHSVTPWCI Trigger: TATACACCAAGGTGTCACACTATGTGAGGTGGATCAGCAAGCAGACAGCGAAGGCGGGGAGGCCTTATATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 72 bp	GCAGAAGCAGGTTTGCCTTCCACGATAGCAGAAGCATaGTTAAGTTGTTGGGATCTGCTACTCATTCGCCGG	+
Preference number: 6 (lower is better) Translates to: AEAGLPSTIAEA*LSCWDLLLIRR Trigger: CCGGCGAATGAGTAGCAGATCCCAACAACTTAACAATGCTTCTGCTATCGTGGAAGGCAAACCTGCTTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS GCA 72 bp	GCCACACCAATCCCATCTGTACAGATCCACTTTGACTaGCTGCAGAATTGTGGGTTGGACTCCTTTTTCACT	+
Preference number: 6 (lower is better) Translates to: ATPIPSVQIHFD*LQNCGLDSFFT Trigger: AGTGAAAAAGGAGTCCAACCCACAATTCTGCAGGCAGTCAAAGTGGATCTGTACAGATGGGATTGGTGTGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 90 bp	ATCCCATCTGTACAGATCCACTTTGACTGCCTGCAGAATTGTGGGTaGGACTCCTTTTTCACTAGTATTAGTAATGCCCCATCCTGTCAC	+
Preference number: 6 (lower is better) Translates to: IPSVQIHFDCLQNCG*DSFFTSISNAPSCH Trigger: GTGACAGGATGGGGCATTACTAATACTAGTGAAAAAGGAGTCCAACCCACAATTCTGCAGGCAGTCAAAGTGGATCTGTACAGATGGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS TCA 72 bp	CCAGCAGTTCCTCCATGCCTGTATGTCAGAGATTTCTaGAGTGCAGATAGGTATCCTGTTGACACTCAAGTT	+
Preference number: 6 (lower is better) Translates to: PAVPPCLYVRDF*SADRYPVDTQV Trigger: AACTTGAGTGTCAACAGGATACCTATCTGCACTTCAGAAATCTCTGACATACAGGCATGGAGGAACTGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 72 bp	ATAGGTATCCTGTTGACACTCAAGTTTAATGGGGATTaGAGCAAGAGCAAAGCTATGTCGTTGTCCAGGAGC	+
Preference number: 6 (lower is better) Translates to: IGILLTLKFNGD*SKSKAMSLSRS Trigger: GCTCCTGGACAACGACATAGCTTTGCTCTTGCTCAAATCCCCATTAAACTTGAGTGTCAACAGGATACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 72 bp	GTACAGATCCACTTTGACTGCCTGCAGAATTGTGGGTaGGACTCCTTTTTCACTAGTATTAGTAATGCCCCA	+
Preference number: 6 (lower is better) Translates to: VQIHFDCLQNCG*DSFFTSISNAP Trigger: TGGGGCATTACTAATACTAGTGAAAAAGGAGTCCAACCCACAATTCTGCAGGCAGTCAAAGTGGATCTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CCA 72 bp	TACAGATCCACTTTGACTGCCTGCAGAATTGTGGGTTaGACTCCTTTTTCACTAGTATTAGTAATGCCCCAT	+
Preference number: 6 (lower is better) Translates to: YRSTLTACRIVG*TPFSLVLVMPH Trigger: ATGGGGCATTACTAATACTAGTGAAAAAGGAGTCCAACCCACAATTCTGCAGGCAGTCAAAGTGGATCTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 72 bp	AAGCTATGTCGTTGTCCAGGAGCCAGTCATCAAACTTaGGGTGCAAGAATAACTTGTCCACTTTCTGATACT	+
Preference number: 6 (lower is better) Translates to: KLCRCPGASHQT*GARITCPLSDT Trigger: AGTATCAGAAAGTGGACAAGTTATTCTTGCACCCAAAGTTTGATGACTGGCTCCTGGACAACGACATAGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS TCA 72 bp	TACTTTATGCCCTTTGTGCTGAGGTCTTCAGTGCCATaGATGATCTCCAATTTAGAGTTGTTTAGTTGGTCG	+
Preference number: 6 (lower is better) Translates to: YFMPFVLRSSVP*MISNLELFSWS Trigger: CGACCAACTAAACAACTCTAAATTGGAGATCATTCATGGCACTGAAGACCTCAGCACAAAGGGCATAAAGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022537.6
CDS CAA 72 bp	ATGTCAGAGATTTCTGAAGTGCAGATAGGTATCCTGTaGACACTCAAGTTTAATGGGGATTTGAGCAAGAGC	+
Preference number: 6 (lower is better) Translates to: MSEISEVQIGIL*TLKFNGDLSKS Trigger: GCTCTTGCTCAAATCCCCATTAAACTTGAGTGTCAACAGGATACCTATCTGCACTTCAGAAATCTCTGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022537.6