Pregenerated sensors for PRSS51 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052099Ensembl transcript IDs: ENSMUST00000063785.12, ENSMUST00000165710.2, ENSMUST00000170709.2, ENSMUST00000224112.2
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGAGTCTCCCAGTTAGCACAGACCATGGGTGCCCCGCTGTCTCCCTaGCACTTGCCGTTGGTGCCCACTTCCTTCCAAGCACAAAGCATG | + |
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Preference number: 5 (lower is better) Translates to: RVSQLAQTMGAPLSP*HLPLVPTSFQAQSM Trigger: CATGCTTTGTGCTTGGAAGGAAGTGGGCACCAACGGCAAGTGCCAGGGAGACAGCGGGGCACCCATGGTCTGTGCTAACTGGGAGACTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CCA 90 bp | GAGGGCAAGGGCTCGTCCCTCCCTTTGTGTCTCCTCCAGGATCCATaGGATAAACTGAGCCACAGACACAAAAATGCCTGGCCTCCCCCT | + |
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Preference number: 5 (lower is better) Translates to: EGKGSSLPLCLLQDP*DKLSHRHKNAWPPP Trigger: AGGGGGAGGCCAGGCATTTTTGTGTCTGTGGCTCAGTTTATCCCATGGATCCTGGAGGAGACACAAAGGGAGGGACGAGCCCTTGCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS TCA 90 bp | CTCCCCCTGGATCCTGAAGTTATGCCCCAGCTGAAGACACCCACTTaGAAGAGTCTCCGAGTCTCCCAGTTAGCACAGACCATGGGTGCC | + |
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Preference number: 5 (lower is better) Translates to: LPLDPEVMPQLKTPT*KSLRVSQLAQTMGA Trigger: GGCACCCATGGTCTGTGCTAACTGGGAGACTCGGAGACTCTTTCAAGTGGGTGTCTTCAGCTGGGGCATAACTTCAGGATCCAGGGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS TCA 90 bp | GCTCGTCCCTCCCTTTGTGTCTCCTCCAGGATCCATGGGATAAACTaGGCCACAGACACAAAAATGCCTGGCCTCCCCCTGGATCCTGAA | + |
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Preference number: 5 (lower is better) Translates to: ARPSLCVSSRIHGIN*ATDTKMPGLPLDPE Trigger: TTCAGGATCCAGGGGGAGGCCAGGCATTTTTGTGTCTGTGGCTCAGTTTATCCCATGGATCCTGGAGGAGACACAAAGGGAGGGACGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CCA 90 bp | TTCTCCCTCTGTGGCAGGCAGATGGGCATTTTGTCTTTATTGAATTaGATTGGCGTGGCAAGTAGGAGCAGGCAGAGGTCGCTGTCAAGG | + |
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Preference number: 5 (lower is better) Translates to: FSLCGRQMGILSLLN*IGVASRSRQRSLSR Trigger: CCTTGACAGCGACCTCTGCCTGCTCCTACTTGCCACGCCAATCCAATTCAATAAAGACAAAATGCCCATCTGCCTGCCACAGAGGGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000170709.2 ENSMUST00000224112.2 |
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| CDS GCA 90 bp | GATGAGTTTGGGAAGGCAGGTCTGTGGCCACACAGAACTGATTCTTaGTGGTCCTTAGCTTGTCCCTTGGAAGCCATGAGCAGTGCAATT | + |
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Preference number: 5 (lower is better) Translates to: DEFGKAGLWPHRTDS*WSLACPLEAMSSAI Trigger: AATTGCACTGCTCATGGCTTCCAAGGGACAAGCTAAGGACCAGCAAGAATCAGTTCTGTGTGGCCACAGACCTGCCTTCCCAAACTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CCA 90 bp | GAGTTTGGGAAGGCAGGTCTGTGGCCACACAGAACTGATTCTTGCTaGTCCTTAGCTTGTCCCTTGGAAGCCATGAGCAGTGCAATTAGA | + |
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Preference number: 5 (lower is better) Translates to: EFGKAGLWPHRTDSC*SLACPLEAMSSAIR Trigger: TCTAATTGCACTGCTCATGGCTTCCAAGGGACAAGCTAAGGACCAGCAAGAATCAGTTCTGTGTGGCCACAGACCTGCCTTCCCAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS GCA 90 bp | ATTTATCATCAGAAAATATGGCAGCAAGCAGTATTTGAGAGCCCATaGTTAGCAATATGGGATGGTAGCGTGGACTGCCAGCCAAGAGAC | + |
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Preference number: 5 (lower is better) Translates to: IYHQKIWQQAVFESP*LAIWDGSVDCQPRD Trigger: GTCTCTTGGCTGGCAGTCCACGCTACCATCCCATATTGCTAAGCATGGGCTCTCAAATACTGCTTGCTGCCATATTTTCTGATGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CAA 72 bp | GCACAGACCATGGGTGCCCCGCTGTCTCCCTGGCACTaGCCGTTGGTGCCCACTTCCTTCCAAGCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: AQTMGAPLSPWH*PLVPTSFQAQS Trigger: GCTTTGTGCTTGGAAGGAAGTGGGCACCAACGGCAAGTGCCAGGGAGACAGCGGGGCACCCATGGTCTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS GCA 72 bp | CACAGACCATGGGTGCCCCGCTGTCTCCCTGGCACTTaGCGTTGGTGCCCACTTCCTTCCAAGCACAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: HRPWVPRCLPGT*RWCPLPSKHKA Trigger: TGCTTTGTGCTTGGAAGGAAGTGGGCACCAACGGCAAGTGCCAGGGAGACAGCGGGGCACCCATGGTCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CCA 72 bp | CAGTTAGCACAGACCATGGGTGCCCCGCTGTCTCCCTaGCACTTGCCGTTGGTGCCCACTTCCTTCCAAGCA | + |
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Preference number: 6 (lower is better) Translates to: QLAQTMGAPLSP*HLPLVPTSFQA Trigger: TGCTTGGAAGGAAGTGGGCACCAACGGCAAGTGCCAGGGAGACAGCGGGGCACCCATGGTCTGTGCTAACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CAA 72 bp | TGGGATGGTAGCGTGGACTGCCAGCCAAGAGACTTTTaGAGGCCTTTGAGAGGGCAAGGGCTCGTCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: WDGSVDCQPRDF*RPLRGQGLVPP Trigger: GGGAGGGACGAGCCCTTGCCCTCTCAAAGGCCTCAAAAAGTCTCTTGGCTGGCAGTCCACGCTACCATCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CAA 90 bp | TGGGATGGTAGCGTGGACTGCCAGCCAAGAGACTTTTTGAGGCCTTaGAGAGGGCAAGGGCTCGTCCCTCCCTTTGTGTCTCCTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WDGSVDCQPRDFLRP*RGQGLVPPFVSPPG Trigger: TCCTGGAGGAGACACAAAGGGAGGGACGAGCCCTTGCCCTCTCAAAGGCCTCAAAAAGTCTCTTGGCTGGCAGTCCACGCTACCATCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CAA 72 bp | AGCGTGGACTGCCAGCCAAGAGACTTTTTGAGGCCTTaGAGAGGGCAAGGGCTCGTCCCTCCCTTTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: SVDCQPRDFLRP*RGQGLVPPFVS Trigger: AGACACAAAGGGAGGGACGAGCCCTTGCCCTCTCAAAGGCCTCAAAAAGTCTCTTGGCTGGCAGTCCACGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CAA 90 bp | CATGCTGGACCTCAAGCAGCTCCCGCAATGGCAGCCATGATGAGTTaGGGAAGGCAGGTCTGTGGCCACACAGAACTGATTCTTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: HAGPQAAPAMAAMMS*GRQVCGHTELILAG Trigger: ACCAGCAAGAATCAGTTCTGTGTGGCCACAGACCTGCCTTCCCAAACTCATCATGGCTGCCATTGCGGGAGCTGCTTGAGGTCCAGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS GCA 72 bp | GGGAAGGCAGGTCTGTGGCCACACAGAACTGATTCTTaGTGGTCCTTAGCTTGTCCCTTGGAAGCCATGAGC | + |
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Preference number: 6 (lower is better) Translates to: GKAGLWPHRTDS*WSLACPLEAMS Trigger: GCTCATGGCTTCCAAGGGACAAGCTAAGGACCAGCAAGAATCAGTTCTGTGTGGCCACAGACCTGCCTTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CCA 72 bp | CAGGTGTTTCCCAAGCATCTGGATACTCACTTGCCATaGGAACTCACCATGCTGGACCTCAAGCAGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: QVFPKHLDTHLP*ELTMLDLKQLP Trigger: CGGGAGCTGCTTGAGGTCCAGCATGGTGAGTTCCCATGGCAAGTGAGTATCCAGATGCTTGGGAAACACCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS GCA 72 bp | CCACACAGGTGTTTCCCAAGCATCTGGATACTCACTTaGCATGGGAACTCACCATGCTGGACCTCAAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PHRCFPSIWILT*HGNSPCWTSSS Trigger: GCTGCTTGAGGTCCAGCATGGTGAGTTCCCATGGCAAGTGAGTATCCAGATGCTTGGGAAACACCTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CAA 90 bp | CAGGAGTTCTCCCTCTGTGGCAGGCAGATGGGCATTTTGTCTTTATaGAATTGGATTGGCGTGGCAAGTAGGAGCAGGCAGAGGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: QEFSLCGRQMGILSL*NWIGVASRSRQRSL Trigger: CAGCGACCTCTGCCTGCTCCTACTTGCCACGCCAATCCAATTCAATAAAGACAAAATGCCCATCTGCCTGCCACAGAGGGAGAACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000170709.2 ENSMUST00000224112.2 |
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| CDS TCA 72 bp | GATCCTGAAGTTATGCCCCAGCTGAAGACACCCACTTaGAAGAGTCTCCGAGTCTCCCAGTTAGCACAGACC | + |
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Preference number: 6 (lower is better) Translates to: DPEVMPQLKTPT*KSLRVSQLAQT Trigger: GGTCTGTGCTAACTGGGAGACTCGGAGACTCTTTCAAGTGGGTGTCTTCAGCTGGGGCATAACTTCAGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063785.12 ENSMUST00000165710.2 ENSMUST00000224112.2 |
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| CDS CCA 72 bp | AAGGCAGGTCTGTGGCCACACAGAACTGATTCTTGCTaGTCCTTAGCTTGTCCCTTGGAAGCCATGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: KAGLWPHRTDSC*SLACPLEAMSS Trigger: ACTGCTCATGGCTTCCAAGGGACAAGCTAAGGACCAGCAAGAATCAGTTCTGTGTGGCCACAGACCTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CAA 72 bp | TCCACACAGGTGTTTCCCAAGCATCTGGATACTCACTaGCCATGGGAACTCACCATGCTGGACCTCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: STQVFPKHLDTH*PWELTMLDLKQ Trigger: CTGCTTGAGGTCCAGCATGGTGAGTTCCCATGGCAAGTGAGTATCCAGATGCTTGGGAAACACCTGTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CAA 90 bp | AAGTTGGTGTCACTGAAAGTCTTGATTCCCATGACCACAGTGACATaGACTGCTACCAGTTCTAATAGGGTTCTCGGGAAGCAGTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: KLVSLKVLIPMTTVT*TATSSNRVLGKQCA Trigger: AGCACACTGCTTCCCGAGAACCCTATTAGAACTGGTAGCAGTCAATGTCACTGTGGTCATGGGAATCAAGACTTTCAGTGACACCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CAA 72 bp | TCACTGAAAGTCTTGATTCCCATGACCACAGTGACATaGACTGCTACCAGTTCTAATAGGGTTCTCGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SLKVLIPMTTVT*TATSSNRVLGK Trigger: CTTCCCGAGAACCCTATTAGAACTGGTAGCAGTCAATGTCACTGTGGTCATGGGAATCAAGACTTTCAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224112.2 |
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| CDS CAA 72 bp | ACTTGTTTTCTCTCTAAGTTGGTGTCACTGAAAGTCTaGATTCCCATGACCACAGTGACATTGACTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: TCFLSKLVSLKV*IPMTTVTLTAT Trigger: GGTAGCAGTCAATGTCACTGTGGTCATGGGAATCAAGACTTTCAGTGACACCAACTTAGAGAGAAAACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165710.2 ENSMUST00000224112.2 |
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