Pregenerated sensors for PRSS50 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000048752

Ensembl transcript IDs: ENSMUST00000051097.6, ENSMUST00000196027.2

Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 72 bp	TTAATCTCTGCTAGCTCCTCCCCGCCTCCGGCAGGCTaGGCGCCACCCCCACAGCAGCACTTAGGAGGAGGG	+
Preference number: 3 (lower is better) Translates to: LISASSSPPPAG*APPPQQHLGGG Trigger: CCCTCCTCCTAAGTGCTGCTGTGGGGGTGGCGCTCAGCCTGCCGGAGGCGGGGAGGAGCTAGCAGAGATTAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS GCA 90 bp	CGGGTGGGCGTGCCGGGGAGGGCGTCGGGGGCGGATGCGCTCACCTaGCGGCCGCCGAGGCAGGAGCAGCAGCAGCAGCAGCAACAGCAG	+
Preference number: 5 (lower is better) Translates to: RVGVPGRASGADALT*RPPRQEQQQQQQQQ Trigger: CTGCTGTTGCTGCTGCTGCTGCTGCTCCTGCCTCGGCGGCCGGCAGGTGAGCGCATCCGCCCCCGACGCCCTCCCCGGCACGCCCACCCG 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 90 bp	GGGCTTGCCGAGGAAGGCGAAGCCTGCCTGAGGGACAGATGCCTCTaGAGCCACAGGAGACCCCGGGTCCGGTCGGGACGGTGGTGGACA	+
Preference number: 5 (lower is better) Translates to: GLAEEGEACLRDRCL*SHRRPRVRSGRWWT Trigger: TGTCCACCACCGTCCCGACCGGACCCGGGGTCTCCTGTGGCTCCAGAGGCATCTGTCCCTCAGGCAGGCTTCGCCTTCCTCGGCAAGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS TCA 90 bp	CGTGGTCTGGTTAGTCTGGGCTTGCCGAGGAAGGCGAAGCCTGCCTaGGGGACAGATGCCTCTGGAGCCACAGGAGACCCCGGGTCCGGT	+
Preference number: 5 (lower is better) Translates to: RGLVSLGLPRKAKPA*GTDASGATGDPGSG Trigger: ACCGGACCCGGGGTCTCCTGTGGCTCCAGAGGCATCTGTCCCTCAGGCAGGCTTCGCCTTCCTCGGCAAGCCCAGACTAACCAGACCACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 90 bp	AGCCTGCACGCTGACCATCCAGGGCCACCGCCGAGTCATGGCTTCTaGGTCCCTGAGAGTAGGGTCTGGCTCGTGGGAGGAGCCACAGAA	+
Preference number: 5 (lower is better) Translates to: SLHADHPGPPPSHGF*VPESRVWLVGGATE Trigger: TTCTGTGGCTCCTCCCACGAGCCAGACCCTACTCTCAGGGACCCAGAAGCCATGACTCGGCGGTGGCCCTGGATGGTCAGCGTGCAGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 90 bp	GGGCCACCGCCGAGTCATGGCTTCTGGGTCCCTGAGAGTAGGGTCTaGCTCGTGGGAGGAGCCACAGAAGGGGAGGTTGCTGGAATGAAC	+
Preference number: 5 (lower is better) Translates to: GPPPSHGFWVPESRV*LVGGATEGEVAGMN Trigger: GTTCATTCCAGCAACCTCCCCTTCTGTGGCTCCTCCCACGAGCCAGACCCTACTCTCAGGGACCCAGAAGCCATGACTCGGCGGTGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 90 bp	GCCGGTCCCAGATCCAGGGCCTGTAGTAGGAGACCTGCAGAAAGATaGGTGGGGCCTCGCTCTTCTTGCAGCCTGGGCCCCAGCTCATCA	+
Preference number: 5 (lower is better) Translates to: AGPRSRACSRRPAER*VGPRSSCSLGPSSS Trigger: TGATGAGCTGGGGCCCAGGCTGCAAGAAGAGCGAGGCCCCACCCATCTTTCTGCAGGTCTCCTACTACAGGCCCTGGATCTGGGACCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CCA 90 bp	GTCCCAGATCCAGGGCCTGTAGTAGGAGACCTGCAGAAAGATGGGTaGGGCCTCGCTCTTCTTGCAGCCTGGGCCCCAGCTCATCATTCC	+
Preference number: 5 (lower is better) Translates to: VPDPGPVVGDLQKDG*GLALLAAWAPAHHS Trigger: GGAATGATGAGCTGGGGCCCAGGCTGCAAGAAGAGCGAGGCCCCACCCATCTTTCTGCAGGTCTCCTACTACAGGCCCTGGATCTGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS GCA 90 bp	TGGGAAGCGATAAGGATGCCAGCACAGATGTGTGAGCCATTAGCCTaGACGCTGACCATCCAGGGCCACCGCCGAGTCATGGCTTCTGGG	+
Preference number: 5 (lower is better) Translates to: WEAIRMPAQMCEPLA*TLTIQGHRRVMASG Trigger: CCCAGAAGCCATGACTCGGCGGTGGCCCTGGATGGTCAGCGTGCAGGCTAATGGCTCACACATCTGTGCTGGCATCCTTATCGCTTCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS TCA 90 bp	CCACTTGAGCTTGAGAAGGCCGATGTCATGGGCCCGGCCAACCCATaGCCAGTACCGTCTGGGTTGGTAGCCATGGTTTATGATGACTCG	+
Preference number: 5 (lower is better) Translates to: PLELEKADVMGPANP*PVPSGLVAMVYDDS Trigger: CGAGTCATCATAAACCATGGCTACCAACCCAGACGGTACTGGTCATGGGTTGGCCGGGCCCATGACATCGGCCTTCTCAAGCTCAAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CCA 90 bp	TTGCTGTTCAGGATAGAGACTTCCTTCTCCTGGAGGGACTGGAACTaGGGCCAGATGCCGTTAGCCCTGGGATATCCCCAGCCTGTCACA	+
Preference number: 5 (lower is better) Translates to: LLFRIETSFSWRDWN*GQMPLALGYPQPVT Trigger: TGTGACAGGCTGGGGATATCCCAGGGCTAACGGCATCTGGCCCCAGTTCCAGTCCCTCCAGGAGAAGGAAGTCTCTATCCTGAACAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 90 bp	CATTTCTTGCTGTTCAGGATAGAGACTTCCTTCTCCTGGAGGGACTaGAACTGGGGCCAGATGCCGTTAGCCCTGGGATATCCCCAGCCT	+
Preference number: 5 (lower is better) Translates to: HFLLFRIETSFSWRD*NWGQMPLALGYPQP Trigger: AGGCTGGGGATATCCCAGGGCTAACGGCATCTGGCCCCAGTTCCAGTCCCTCCAGGAGAAGGAAGTCTCTATCCTGAACAGCAAGAAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS GCA 72 bp	GGTCTCCAGCGAGTCAGAGGTGGCCGCGGGTGGGCGTaGCGGGGAGGGCGTCGGGGGCGGATGCGCTCACCT	+
Preference number: 6 (lower is better) Translates to: GLQRVRGGRGWA*RGGRRGRMRSP Trigger: AGGTGAGCGCATCCGCCCCCGACGCCCTCCCCGGCACGCCCACCCGCGGCCACCTCTGACTCGCTGGAGACC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	GTGGAAGGTCTCCAGCGAGTCAGAGGTGGCCGCGGGTaGGCGTGCCGGGGAGGGCGTCGGGGGCGGATGCGC	+
Preference number: 6 (lower is better) Translates to: VEGLQRVRGGRG*ACRGGRRGRMR Trigger: GCGCATCCGCCCCCGACGCCCTCCCCGGCACGCCCACCCGCGGCCACCTCTGACTCGCTGGAGACCTTCCAC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	GCGTCCCCGGGGATGCTCCTGCGGCCAAGTAGCCTGTaGAAGGTCTCCAGCGAGTCAGAGGTGGCCGCGGGT	+
Preference number: 6 (lower is better) Translates to: ASPGMLLRPSSL*KVSSESEVAAG Trigger: ACCCGCGGCCACCTCTGACTCGCTGGAGACCTTCCACAGGCTACTTGGCCGCAGGAGCATCCCCGGGGACGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	GAGGAAGGCGAAGCCTGCCTGAGGGACAGATGCCTCTaGAGCCACAGGAGACCCCGGGTCCGGTCGGGACGG	+
Preference number: 6 (lower is better) Translates to: EEGEACLRDRCL*SHRRPRVRSGR Trigger: CCGTCCCGACCGGACCCGGGGTCTCCTGTGGCTCCAGAGGCATCTGTCCCTCAGGCAGGCTTCGCCTTCCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS GCA 72 bp	TCCGGTCGGGACGGTGGTGGACAGCGTCCCCGGGGATaGTCCTGCGGCCAAGTAGCCTGTGGAAGGTCTCCA	+
Preference number: 6 (lower is better) Translates to: SGRDGGGQRPRG*SCGQVACGRSP Trigger: TGGAGACCTTCCACAGGCTACTTGGCCGCAGGAGCATCCCCGGGGACGCTGTCCACCACCGTCCCGACCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	GCTGACCATCCAGGGCCACCGCCGAGTCATGGCTTCTaGGTCCCTGAGAGTAGGGTCTGGCTCGTGGGAGGA	+
Preference number: 6 (lower is better) Translates to: ADHPGPPPSHGF*VPESRVWLVGG Trigger: TCCTCCCACGAGCCAGACCCTACTCTCAGGGACCCAGAAGCCATGACTCGGCGGTGGCCCTGGATGGTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	CCAGGGCCTGTAGTAGGAGACCTGCAGAAAGATGGGTaGGGCCTCGCTCTTCTTGCAGCCTGGGCCCCAGCT	+
Preference number: 6 (lower is better) Translates to: PGPVVGDLQKDG*GLALLAAWAPA Trigger: AGCTGGGGCCCAGGCTGCAAGAAGAGCGAGGCCCCACCCATCTTTCTGCAGGTCTCCTACTACAGGCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CCA 72 bp	GCCATGGTCTGTGAGTTCGGTGGAGCCGTCGTGGTCTaGTTAGTCTGGGCTTGCCGAGGAAGGCGAAGCCTG	+
Preference number: 6 (lower is better) Translates to: AMVCEFGGAVVV*LVWACRGRRSL Trigger: CAGGCTTCGCCTTCCTCGGCAAGCCCAGACTAACCAGACCACGACGGCTCCACCGAACTCACAGACCATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	CCGAGTCATGGCTTCTGGGTCCCTGAGAGTAGGGTCTaGCTCGTGGGAGGAGCCACAGAAGGGGAGGTTGCT	+
Preference number: 6 (lower is better) Translates to: PSHGFWVPESRV*LVGGATEGEVA Trigger: AGCAACCTCCCCTTCTGTGGCTCCTCCCACGAGCCAGACCCTACTCTCAGGGACCCAGAAGCCATGACTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	AGATCCAGGGCCTGTAGTAGGAGACCTGCAGAAAGATaGGTGGGGCCTCGCTCTTCTTGCAGCCTGGGCCCC	+
Preference number: 6 (lower is better) Translates to: RSRACSRRPAER*VGPRSSCSLGP Trigger: GGGGCCCAGGCTGCAAGAAGAGCGAGGCCCCACCCATCTTTCTGCAGGTCTCCTACTACAGGCCCTGGATCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CCA 72 bp	TTGAGCCCCCACTTGAGCTTGAGAAGGCCGATGTCATaGGCCCGGCCAACCCATGACCAGTACCGTCTGGGT	+
Preference number: 6 (lower is better) Translates to: LSPHLSLRRPMS*ARPTHDQYRLG Trigger: ACCCAGACGGTACTGGTCATGGGTTGGCCGGGCCCATGACATCGGCCTTCTCAAGCTCAAGTGGGGGCTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CAA 90 bp	GGCAGGCAGATGGGCCACACGTATTTACTGTACTTGAGCCCCCACTaGAGCTTGAGAAGGCCGATGTCATGGGCCCGGCCAACCCATGAC	+
Preference number: 6 (lower is better) Translates to: GRQMGHTYLLYLSPH*SLRRPMSWARPTHD Trigger: GTCATGGGTTGGCCGGGCCCATGACATCGGCCTTCTCAAGCTCAAGTGGGGGCTCAAGTACAGTAAATACGTGTGGCCCATCTGCCTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS GCA 72 bp	ATAAGGATGCCAGCACAGATGTGTGAGCCATTAGCCTaGACGCTGACCATCCAGGGCCACCGCCGAGTCATG	+
Preference number: 6 (lower is better) Translates to: IRMPAQMCEPLA*TLTIQGHRRVM Trigger: CATGACTCGGCGGTGGCCCTGGATGGTCAGCGTGCAGGCTAATGGCTCACACATCTGTGCTGGCATCCTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CCA 72 bp	AGGATAGAGACTTCCTTCTCCTGGAGGGACTGGAACTaGGGCCAGATGCCGTTAGCCCTGGGATATCCCCAG	+
Preference number: 6 (lower is better) Translates to: RIETSFSWRDWN*GQMPLALGYPQ Trigger: CTGGGGATATCCCAGGGCTAACGGCATCTGGCCCCAGTTCCAGTCCCTCCAGGAGAAGGAAGTCTCTATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CAA 90 bp	CAGATGGGCCACACGTATTTACTGTACTTGAGCCCCCACTTGAGCTaGAGAAGGCCGATGTCATGGGCCCGGCCAACCCATGACCAGTAC	+
Preference number: 6 (lower is better) Translates to: QMGHTYLLYLSPHLS*RRPMSWARPTHDQY Trigger: GTACTGGTCATGGGTTGGCCGGGCCCATGACATCGGCCTTCTCAAGCTCAAGTGGGGGCTCAAGTACAGTAAATACGTGTGGCCCATCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS TCA 72 bp	CTTGAGAAGGCCGATGTCATGGGCCCGGCCAACCCATaGCCAGTACCGTCTGGGTTGGTAGCCATGGTTTAT	+
Preference number: 6 (lower is better) Translates to: LEKADVMGPANP*PVPSGLVAMVY Trigger: ATAAACCATGGCTACCAACCCAGACGGTACTGGTCATGGGTTGGCCGGGCCCATGACATCGGCCTTCTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CAA 72 bp	ATGGGCCACACGTATTTACTGTACTTGAGCCCCCACTaGAGCTTGAGAAGGCCGATGTCATGGGCCCGGCCA	+
Preference number: 6 (lower is better) Translates to: MGHTYLLYLSPH*SLRRPMSWARP Trigger: TGGCCGGGCCCATGACATCGGCCTTCTCAAGCTCAAGTGGGGGCTCAAGTACAGTAAATACGTGTGGCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS TCA 72 bp	TCGTGGGAGGAGCCACAGAAGGGGAGGTTGCTGGAATaGACCGTCTTAAGAACGGACCCAGTAGTGTCCATC	+
Preference number: 6 (lower is better) Translates to: SWEEPQKGRLLE*TVLRTDPVVSI Trigger: GATGGACACTACTGGGTCCGTTCTTAAGACGGTTCATTCCAGCAACCTCCCCTTCTGTGGCTCCTCCCACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6
CDS CAA 72 bp	CACACGTATTTACTGTACTTGAGCCCCCACTTGAGCTaGAGAAGGCCGATGTCATGGGCCCGGCCAACCCAT	+
Preference number: 6 (lower is better) Translates to: HTYLLYLSPHLS*RRPMSWARPTH Trigger: ATGGGTTGGCCGGGCCCATGACATCGGCCTTCTCAAGCTCAAGTGGGGGCTCAAGTACAGTAAATACGTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CAA 72 bp	CCAGGCAGGCAGATGGGCCACACGTATTTACTGTACTaGAGCCCCCACTTGAGCTTGAGAAGGCCGATGTCA	+
Preference number: 6 (lower is better) Translates to: PGRQMGHTYLLY*SPHLSLRRPMS Trigger: TGACATCGGCCTTCTCAAGCTCAAGTGGGGGCTCAAGTACAGTAAATACGTGTGGCCCATCTGCCTGCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS TCA 72 bp	GCCATGGTTTATGATGACTCGATGGACCGGCACATCTaGGCTGGTTCCTGCCGTCTGATTAATCCACGGGCT	+
Preference number: 6 (lower is better) Translates to: AMVYDDSMDRHI*AGSCRLINPRA Trigger: AGCCCGTGGATTAATCAGACGGCAGGAACCAGCTCAGATGTGCCGGTCCATCGAGTCATCATAAACCATGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051097.6 ENSMUST00000196027.2
CDS CCA 72 bp	CATTTCTTGCTGTTCAGGATAGAGACTTCCTTCTCCTaGAGGGACTGGAACTGGGGCCAGATGCCGTTAGCC	+
Preference number: 6 (lower is better) Translates to: HFLLFRIETSFS*RDWNWGQMPLA Trigger: GGCTAACGGCATCTGGCCCCAGTTCCAGTCCCTCCAGGAGAAGGAAGTCTCTATCCTGAACAGCAAGAAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051097.6

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