RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRSS48 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049013

Ensembl transcript IDs: ENSMUST00000061343.4

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GACAGAGGCCCTCCAGAATCGCCCTTGCAGCTATCCTTCCTCGACTaGCTCTCACCAGCACAGAACATGTCTTCCTTGATGACCCGCTCC +
Preference number: 5 (lower is better)
Translates to: DRGPPESPLQLSFLD*LSPAQNMSSLMTRS
Trigger: GGAGCGGGTCATCAAGGAAGACATGTTCTGTGCTGGTGAGAGGCAGTCGAGGAAGGATAGCTGCAAGGGCGATTCTGGAGGGCCTCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 90 bp AGACACCATCAATGTGACAGGACAGAGGCCCTCCAGAATCGCCCTTaGAGCTATCCTTCCTCGACTGCCTCTCACCAGCACAGAACATGT +
Preference number: 5 (lower is better)
Translates to: RHHQCDRTEALQNRP*SYPSSTASHQHRTC
Trigger: ACATGTTCTGTGCTGGTGAGAGGCAGTCGAGGAAGGATAGCTGCAAGGGCGATTCTGGAGGGCCTCTGTCCTGTCACATTGATGGTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CCA 90 bp GTCTTCCTTGATGACCCGCTCCAGATCCGGGAGGAAGACACCAATTaGGTTGTAGAGTTGTTCACACGCCTCACTGGAAATGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: VFLDDPLQIREEDTN*VVELFTRLTGNDRH
Trigger: GTGCCTGTCATTTCCAGTGAGGCGTGTGAACAACTCTACAACCCAATTGGTGTCTTCCTCCCGGATCTGGAGCGGGTCATCAAGGAAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 90 bp TTTTGTCCCCATCCAGTCACCCAGCAAGAAGCTGGAACTGTCAGCTaGTTTGAGATATTGGGCAAGCAGATGGGCAGAATGACCGATGAG +
Preference number: 5 (lower is better)
Translates to: FCPHPVTQQEAGTVS*FEILGKQMGRMTDE
Trigger: CTCATCGGTCATTCTGCCCATCTGCTTGCCCAATATCTCAAAGCAGCTGACAGTTCCAGCTTCTTGCTGGGTGACTGGATGGGGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CCA 90 bp TGGACACATAGTATTCTTTGCCTGTGCTTGAGTACTCTCTATCGATaGATCCAAGCCACACACTGTATAGAAAACTGTACCAGGTCTTTT +
Preference number: 5 (lower is better)
Translates to: WTHSILCLCLSTLYR*IQATHCIENCTRSF
Trigger: AAAAGACCTGGTACAGTTTTCTATACAGTGTGTGGCTTGGATCCATCGATAGAGAGTACTCAAGCACAGGCAAAGAATACTATGTGTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 72 bp GGTGACCCGGGAAGACAGCTTCAGCAGGGCGATGTCTaGTTCTGTGTGGCGGTGTTTGTCGGGGATGGCGAT +
Preference number: 6 (lower is better)
Translates to: GDPGRQLQQGDV*FCVAVFVGDGD
Trigger: ATCGCCATCCCCGACAAACACCGCCACACAGAAGCAGACATCGCCCTGCTGAAGCTGTCTTCCCGGGTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 72 bp GCCAGCGCCCCAAAGCAGCATCTTGGCCACCCACAATaGGTCCAGTGTGTACAGGTCGTCCACATACTGATT +
Preference number: 6 (lower is better)
Translates to: ASAPKQHLGHPQ*VQCVQVVHILI
Trigger: AATCAGTATGTGGACGACCTGTACACACTGGACGCATTGTGGGTGGCCAAGATGCTGCTTTGGGGCGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CCA 72 bp GAAGACAGCTTCAGCAGGGCGATGTCTGCTTCTGTGTaGCGGTGTTTGTCGGGGATGGCGATTCTGGACACA +
Preference number: 6 (lower is better)
Translates to: EDSFSRAMSASV*RCLSGMAILDT
Trigger: TGTGTCCAGAATCGCCATCCCCGACAAACACCGCCACACAGAAGCAGACATCGCCCTGCTGAAGCTGTCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 72 bp CCTCCAGAATCGCCCTTGCAGCTATCCTTCCTCGACTaGCTCTCACCAGCACAGAACATGTCTTCCTTGATG +
Preference number: 6 (lower is better)
Translates to: PPESPLQLSFLD*LSPAQNMSSLM
Trigger: CATCAAGGAAGACATGTTCTGTGCTGGTGAGAGGCAGTCGAGGAAGGATAGCTGCAAGGGCGATTCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CAA 90 bp CACTTCAAGTTCTTGGAGGGTAGAGGGGTAGTGACCTTCCTGATTTaGTCCCCATCCAGTCACCCAGCAAGAAGCTGGAACTGTCAGCTG +
Preference number: 6 (lower is better)
Translates to: HFKFLEGRGVVTFLI*SPSSHPARSWNCQL
Trigger: CAGCTGACAGTTCCAGCTTCTTGCTGGGTGACTGGATGGGGACAAAATCAGGAAGGTCACTACCCCTCTACCCTCCAAGAACTTGAAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS TCA 72 bp AGTCACCCAGCAAGAAGCTGGAACTGTCAGCTGCTTTaGGATATTGGGCAAGCAGATGGGCAGAATGACCGA +
Preference number: 6 (lower is better)
Translates to: SHPARSWNCQLL*DIGQADGQNDR
Trigger: TCGGTCATTCTGCCCATCTGCTTGCCCAATATCTCAAAGCAGCTGACAGTTCCAGCTTCTTGCTGGGTGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 72 bp CATCCAGTCACCCAGCAAGAAGCTGGAACTGTCAGCTaGTTTGAGATATTGGGCAAGCAGATGGGCAGAATG +
Preference number: 6 (lower is better)
Translates to: HPVTQQEAGTVS*FEILGKQMGRM
Trigger: CATTCTGCCCATCTGCTTGCCCAATATCTCAAAGCAGCTGACAGTTCCAGCTTCTTGCTGGGTGACTGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CAA 72 bp CAGATCCGGGAGGAAGACACCAATTGGGTTGTAGAGTaGTTCACACGCCTCACTGGAAATGACAGGCACTTC +
Preference number: 6 (lower is better)
Translates to: QIREEDTNWVVE*FTRLTGNDRHF
Trigger: GAAGTGCCTGTCATTTCCAGTGAGGCGTGTGAACAACTCTACAACCCAATTGGTGTCTTCCTCCCGGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CAA 72 bp CAGCAAGAAGCTGGAACTGTCAGCTGCTTTGAGATATaGGGCAAGCAGATGGGCAGAATGACCGATGAGAAG +
Preference number: 6 (lower is better)
Translates to: QQEAGTVSCFEI*GKQMGRMTDEK
Trigger: CTTCTCATCGGTCATTCTGCCCATCTGCTTGCCCAATATCTCAAAGCAGCTGACAGTTCCAGCTTCTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CAA 72 bp ACACGCCTCACTGGAAATGACAGGCACTTCAAGTTCTaGGAGGGTAGAGGGGTAGTGACCTTCCTGATTTTG +
Preference number: 6 (lower is better)
Translates to: TRLTGNDRHFKF*EGRGVVTFLIL
Trigger: CAAAATCAGGAAGGTCACTACCCCTCTACCCTCCAAGAACTTGAAGTGCCTGTCATTTCCAGTGAGGCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 72 bp GGATGGCGATTCTGGACACATAGTATTCTTTGCCTGTaGTTGAGTACTCTCTATCGATGGATCCAAGCCACA +
Preference number: 6 (lower is better)
Translates to: GWRFWTHSILCL*LSTLYRWIQAT
Trigger: TGTGGCTTGGATCCATCGATAGAGAGTACTCAAGCACAGGCAAAGAATACTATGTGTCCAGAATCGCCATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS GCA 72 bp TGTCGGGGATGGCGATTCTGGACACATAGTATTCTTTaGCTGTGCTTGAGTACTCTCTATCGATGGATCCAA +
Preference number: 6 (lower is better)
Translates to: CRGWRFWTHSIL*LCLSTLYRWIQ
Trigger: TTGGATCCATCGATAGAGAGTACTCAAGCACAGGCAAAGAATACTATGTGTCCAGAATCGCCATCCCCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4
CDS CCA 72 bp AGTATTCTTTGCCTGTGCTTGAGTACTCTCTATCGATaGATCCAAGCCACACACTGTATAGAAAACTGTACC +
Preference number: 6 (lower is better)
Translates to: SILCLCLSTLYR*IQATHCIENCT
Trigger: GGTACAGTTTTCTATACAGTGTGTGGCTTGGATCCATCGATAGAGAGTACTCAAGCACAGGCAAAGAATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000061343.4