Pregenerated sensors for PRSS47 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090658Ensembl transcript IDs: ENSMUST00000182457.3, ENSMUST00000203968.3, ENSMUST00000222769.2
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGCCTGGTGTTTGCCCGTACAAGGCATTACAGAACTCATTGTCAATaGTGCCCACCTCACCCTCCTGGAGTGAGAATGGTGGTAACAGTT | + |
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Preference number: 5 (lower is better) Translates to: GLVFARTRHYRTHCQ*CPPHPPGVRMVVTV Trigger: AACTGTTACCACCATTCTCACTCCAGGAGGGTGAGGTGGGCATCATTGACAATGAGTTCTGTAATGCCTTGTACGGGCAAACACCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CCA 90 bp | TTCCTGGTACAGCTGATTATTCCCCAACAGAACCTCATAGTCCTCTaGGGCCTGGGATTTGTTTCGAAAACAGTGGGCTGTGGAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: FLVQLIIPQQNLIVL*GLGFVSKTVGCGSQ Trigger: CTGGCTTCCACAGCCCACTGTTTTCGAAACAAATCCCAGGCCCCAGAGGACTATGAGGTTCTGTTGGGGAATAATCAGCTGTACCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS GCA 90 bp | TTCCCAACCATCTTCGGCTTCCCACAAACTGTGGAGACAATCCCATaGAGTCTATTAGAGACACAATCCCTGGACTTTATGGCCTCCACC | + |
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Preference number: 5 (lower is better) Translates to: FPTIFGFPQTVETIP*SLLETQSLDFMAST Trigger: GGTGGAGGCCATAAAGTCCAGGGATTGTGTCTCTAATAGACTGCATGGGATTGTCTCCACAGTTTGTGGGAAGCCGAAGATGGTTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203968.3 |
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| CDS TCA 90 bp | GCTGTGTGTCTTTGGATGGGAGACAGGCAGGTACAACATAGGATGTaGAGTTTATGGGCAGATGCAGCTGCAGCATTGCAATGTCACTTC | + |
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Preference number: 5 (lower is better) Translates to: AVCLWMGDRQVQHRM*SLWADAAAALQCHF Trigger: GAAGTGACATTGCAATGCTGCAGCTGCATCTGCCCATAAACTTCACATCCTATGTTGTACCTGCCTGTCTCCCATCCAAAGACACACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CCA 90 bp | CAGCATTGCAATGTCACTTCCAAAAGAATGAAACTTCTCAAAGTCTaGATGACTGACGATATGATTCACAGAAATCTTCTGAGTGTGCTT | + |
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Preference number: 5 (lower is better) Translates to: QHCNVTSKRMKLLKV*MTDDMIHRNLLSVL Trigger: AAGCACACTCAGAAGATTTCTGTGAATCATATCGTCAGTCATCCAGACTTTGAGAAGTTTCATTCTTTTGGAAGTGACATTGCAATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS GCA 72 bp | CCACAGAGATGCACGCCCCGGTACAGCAGGCTGGCCTaGCATGGCCACTGGCCAGCCAATGTGTCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: PQRCTPRYSRLA*HGHWPANVSWP Trigger: TGGCCAGGACACATTGGCTGGCCAGTGGCCATGGCAGGCCAGCCTGCTGTACCGGGGCGTGCATCTCTGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CCA 72 bp | TGGGGTAAATGGGATGCCGGCAATCCAGGCCCCAGCTaGCCAGTCCTACCAGGACCCATGTACTGTTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: WGKWDAGNPGPS*PVLPGPMYCCG Trigger: ACCACAACAGTACATGGGTCCTGGTAGGACTGGCCAGCTGGGGCCTGGATTGCCGGCATCCCATTTACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CCA 72 bp | CTGGTTCCTGCTGGCCGACGGTTCCCAGCCTTGCTGTaGCTGTGGTCTTCCAGGTGCTATCCCAGAAACCTT | + |
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Preference number: 6 (lower is better) Translates to: LVPAGRRFPALL*LWSSRCYPRNL Trigger: AAGGTTTCTGGGATAGCACCTGGAAGACCACAGCCACAGCAAGGCTGGGAACCGTCGGCCAGCAGGAACCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203968.3 |
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| CDS CCA 72 bp | ACAGACCTGGTCTGTTCACAGGATACTGGTTCCTGCTaGCCGACGGTTCCCAGCCTTGCTGTGGCTGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TDLVCSQDTGSC*PTVPSLAVAVV Trigger: GACCACAGCCACAGCAAGGCTGGGAACCGTCGGCCAGCAGGAACCAGTATCCTGTGAACAGACCAGGTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203968.3 |
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| CDS TCA 72 bp | GTCCTACCAGGACCCATGTACTGTTGTGGTAGCAGATaGGAGGGCCCCCAGAGTCACCCCTGCAGATGGACT | + |
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Preference number: 6 (lower is better) Translates to: VLPGPMYCCGSR*EGPQSHPCRWT Trigger: AGTCCATCTGCAGGGGTGACTCTGGGGGCCCTCTCATCTGCTACCACAACAGTACATGGGTCCTGGTAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS GCA 72 bp | CACAATCCCTGGACTTTATGGCCTCCACCCGTTCATTaGCCGCCCACTGCCTTTCAAACAGACCTGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: HNPWTLWPPPVH*PPTAFQTDLVC Trigger: ACAGACCAGGTCTGTTTGAAAGGCAGTGGGCGGGCAATGAACGGGTGGAGGCCATAAAGTCCAGGGATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203968.3 |
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| CDS CCA 72 bp | CCAGATTTGTGCAGCCATAAGGATGTTGCAGGGTTGTaGGGAGCCAGCAGCCTTCAGAGGTGTGGGTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PDLCSHKDVAGL*GASSLQRCGLK Trigger: CTTCAACCCACACCTCTGAAGGCTGCTGGCTCCCCACAACCCTGCAACATCCTTATGGCTGCACAAATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CAA 72 bp | GGGTTGTGGGGAGCCAGCAGCCTTCAGAGGTGTGGGTaGAAGTTCTGTGTGAAGAGACACAGATACAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: GLWGASSLQRCG*KFCVKRHRYRF Trigger: GAACCTGTATCTGTGTCTCTTCACACAGAACTTCAACCCACACCTCTGAAGGCTGCTGGCTCCCCACAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CAA 90 bp | CTGCTTTGGCCTGGTGTTTGCCCGTACAAGGCATTACAGAACTCATaGTCAATGATGCCCACCTCACCCTCCTGGAGTGAGAATGGTGGT | + |
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Preference number: 6 (lower is better) Translates to: LLWPGVCPYKALQNS*SMMPTSPSWSENGG Trigger: ACCACCATTCTCACTCCAGGAGGGTGAGGTGGGCATCATTGACAATGAGTTCTGTAATGCCTTGTACGGGCAAACACCAGGCCAAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CAA 72 bp | GGTCTTCCAGGTGCTATCCCAGAAACCTTTGAAGCATaGGGGATGCTAGGCTTTATGGGCAGCAGTAACAGC | + |
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Preference number: 6 (lower is better) Translates to: GLPGAIPETFEA*GMLGFMGSSNS Trigger: GCTGTTACTGCTGCCCATAAAGCCTAGCATCCCCAATGCTTCAAAGGTTTCTGGGATAGCACCTGGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203968.3 |
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| CDS TCA 72 bp | TTTGCCCGTACAAGGCATTACAGAACTCATTGTCAATaGTGCCCACCTCACCCTCCTGGAGTGAGAATGGTG | + |
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Preference number: 6 (lower is better) Translates to: FARTRHYRTHCQ*CPPHPPGVRMV Trigger: CACCATTCTCACTCCAGGAGGGTGAGGTGGGCATCATTGACAATGAGTTCTGTAATGCCTTGTACGGGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS GCA 72 bp | CCCCTGCACACAGCATTTCCTCATATACATAGTTCCTaGTTTGGCCTGGTGTTTGCCCGTACAAGGCATTAC | + |
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Preference number: 6 (lower is better) Translates to: PLHTAFPHIHSS*FGLVFARTRHY Trigger: GTAATGCCTTGTACGGGCAAACACCAGGCCAAAGCAGGAACTATGTATATGAGGAAATGCTGTGTGCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CCA 72 bp | CAGCTGATTATTCCCCAACAGAACCTCATAGTCCTCTaGGGCCTGGGATTTGTTTCGAAAACAGTGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QLIIPQQNLIVL*GLGFVSKTVGC Trigger: ACAGCCCACTGTTTTCGAAACAAATCCCAGGCCCCAGAGGACTATGAGGTTCTGTTGGGGAATAATCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CCA 72 bp | TTCTGTGTGAAGAGACACAGATACAGGTTCTGGAAGTaGAGTGAGTCTCTTGACTTGGCTGATCCAGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FCVKRHRYRFWK*SESLDLADPVS Trigger: ACTGACTGGATCAGCCAAGTCAAGAGACTCACTCCACTTCCAGAACCTGTATCTGTGTCTCTTCACACAGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS GCA 72 bp | ATCTTCGGCTTCCCACAAACTGTGGAGACAATCCCATaGAGTCTATTAGAGACACAATCCCTGGACTTTATG | + |
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Preference number: 6 (lower is better) Translates to: IFGFPQTVETIP*SLLETQSLDFM Trigger: CATAAAGTCCAGGGATTGTGTCTCTAATAGACTGCATGGGATTGTCTCCACAGTTTGTGGGAAGCCGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000203968.3 |
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| CDS CCA 72 bp | TTGAAGTTCTGTGTGAAGAGACACAGATACAGGTTCTaGAAGTGGAGTGAGTCTCTTGACTTGGCTGATCCA | + |
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Preference number: 6 (lower is better) Translates to: LKFCVKRHRYRF*KWSESLDLADP Trigger: TGGATCAGCCAAGTCAAGAGACTCACTCCACTTCCAGAACCTGTATCTGTGTCTCTTCACACAGAACTTCAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000203968.3 ENSMUST00000222769.2 |
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| CDS CAA 72 bp | TGCACACAGCATTTCCTCATATACATAGTTCCTGCTTaGGCCTGGTGTTTGCCCGTACAAGGCATTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: CTQHFLIYIVPA*AWCLPVQGITE Trigger: TTCTGTAATGCCTTGTACGGGCAAACACCAGGCCAAAGCAGGAACTATGTATATGAGGAAATGCTGTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000182457.3 ENSMUST00000203968.3 ENSMUST00000222769.2 |
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