Pregenerated sensors for PRSS46 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049719Ensembl transcript IDs: ENSMUST00000176403.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAACCCACAGTGGGTCAAGGACCCTTCCCCAAGTCCCTCTGTCCTaGAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGGA | + |
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Preference number: 1 (lower is better) Translates to: KTHSGSRTLPQVPLS*SPVQPPVSTSSEGG Trigger: TCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGAGGGACTTGGGGAAGGGTCCTTGACCCACTGTGGGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTTGGTCAAAGTCAAGAACATGGTAACTTCAGATGGCTCAAAAAGGTTCAAGGAACAAAACCCACAGTaGGTCAAGGACCCTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VLVKVKNMVTSDGSKRFKEQNPQ*VKDPSP Trigger: TGGGGAAGGGTCCTTGACCCACTGTGGGTTTTGTTC...CTTGAACCTTTTTGAGCCATCTGAAGTTACCATGTTCTTGACTTTGACCAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| 3UTR TCA 72 bp | CTGAAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCTaGGGGCGGAGCAGAGAGGAGGGAAAAGTAGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LKSCSASGVHVF*GRSREEGKVAS Trigger: AGAGGCTACTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACTTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | CAGTGGGTCAAGGACCCTTCCCCAAGTCCCTCTGTCCTGAAGTCCTGTTCAGCCAGGATCCAGTGGTGGTaGATGAGGGAGCCGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QWVKDPSPSPSVLKSCSARIQWW*MREPLQ Trigger: CTGCAGCGGCTCCCTCATCCACCACCACTGGATCCT...GGCTGAACAGGACTTCAGGACAGAGGGACTTGGGGAAGGGTCCTTGACCCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | GTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGGAGCAGAGAGGAGGGAAAAGAGAGGTGCTGTTGTCTaGGAGGGTCTGGACTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQPPVSTSSEGGAERREKRGAVV*EGLDSH Trigger: GTGGGAGTCCAGACCCTCCCAGACAACAGCACCTCT...CTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | TCCCCAAGTCCCTCTGTCCTGAAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCGCCAGTGAGGATGAATaGGCTCAGGAAGGAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SPSPSVLKSCSASGVHVFASEDE*AQEGGD Trigger: GTCCCCTCCTTCCTGAGCCCATTCATCCTCACTGGC...GAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGAGGGACTTGGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCTGTCCTGAAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGTCTGGCAGAAGCAAGTaGAGAGGAGAGAAGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: SLCPEVLFSLRCPRLLRASGRSK*RGEKTV Trigger: CACGGTCTTCTCTCCTCTCCACTTGCTTCTGCCAGA...CGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | AGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGGAGCAGAGAGGAGGCGACGACCCAGCACATaGTTCCAATGCTTGGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SPVQPPVSTSSEGGAERRRRPST*FQCLAL Trigger: TAAAGCCAAGCATTGGAACCATGTGCTGGGTCGTCG...CCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR GCA 90 bp | GTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGGAGCAGAGAGGAGGGAAAAGTTCCCAGGAAAAGAATaGTTACCTGCCACGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: VQPPVSTSSEGGAERREKFPGKE*LPATAT Trigger: AGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAA...CTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | CTCCGGTGTCCACGTCTTCTGAGGGCGGAGCAGAGAGGAGGGAAAAGTAGCCTCCCTTGCAGGTTATGTTaGTCTGACCACAGGACCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRCPRLLRAEQRGGKSSLPCRLC*SDHRTR Trigger: TCTGGTCCTGTGGTCAGACCAACATAACCTGCAAGG...GAGGCTACTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR GCA 90 bp | CTCCGGTGTCCACGTCTTCTGAGGGCGGAGCAGAGAGGAGGGAAAAGTAGCCTCAAAAGAATGCTTACCTaGCACGGCCACTTGCCTACT | + |
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Preference number: 4 (lower is better) Translates to: LRCPRLLRAEQRGGKSSLKRMLT*HGHLPT Trigger: AGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTT...GAGGCTACTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR GCA 90 bp | GTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGGAGCAGAGAGGAGGGAAAAGTCCCATTTACCACCTTaGAGGTTATGTTGGTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: VQPPVSTSSEGGAERREKSHLPP*RLCWSD Trigger: GTCAGACCAACATAACCTGCAAGGTGGTAAATGGGA...CTTTTCCCTCCTCTCTGCTCCGCCCTCAGAAGACGTGGACACCGGAGGCTGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGTGCTCTAAAGGGTTTTGGTCAAAGTCAAGAACATGGTAACTTCAGAGTGAGGATCCAGTGGTaGTGGATGAGGGAGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: EGGALKGFGQSQEHGNFRVRIQW*WMREPL Trigger: CAGCGGCTCCCTCATCCACCACCACTGGATCCTCAC...TCTGAAGTTACCATGTTCTTGACTTTGACCAAAACCCTTTAGAGCACCTCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | TATGAGGGAGGTGCTCTAAAGGGTTTTGGTCAAAGTCAAGAACATGGTAACTTCCTTCCGGAGGTGTCCTaGCAAGTGTCCAGGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: YEGGALKGFGQSQEHGNFLPEVS*QVSRPH Trigger: ATGGGGCCTGGACACTTGTCAGGACACCTCCGGAAG...GAAGTTACCATGTTCTTGACTTTGACCAAAACCCTTTAGAGCACCTCCCTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | GAGGGAGGTGCTCTAAAGGGTTTTGGTCAAAGTCAAGAACATGGTAACTTCAGACAGGTTATGTTGGTCTaGCCACAGGACCAGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: EGGALKGFGQSQEHGNFRQVMLV*PQDQIQ Trigger: CTGGATCTGGTCCTGTGGTCAGACCAACATAACCTG...TCTGAAGTTACCATGTTCTTGACTTTGACCAAAACCCTTTAGAGCACCTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | TTCAAGAGCATCTTCATTGAACAACTGGGGAACAAAACCCACAGTGGGTCAAGGCAGGTCTTGTTCATCTaGCAAACCAGAGAGCTTCCG | + |
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Preference number: 4 (lower is better) Translates to: FKSIFIEQLGNKTHSGSRQVLFI*QTRELP Trigger: CGGAAGCTCTCTGGTTTGCCAGATGAACAAGACCTG...CCTTGACCCACTGTGGGTTTTGTTCCCCAGTTGTTCAATGAAGATGCTCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CCA 90 bp | GAGGGAGGTGCTCTAAAGGGTTTTGGTCAAAGTCAAGAACATGGTAACTTCAGATGTCTCTTGATCCACTaGGTGAAGTGGGAGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: EGGALKGFGQSQEHGNFRCLLIH*VKWEVL Trigger: CAGCACCTCCCACTTCACCCAGTGGATCAAGAGACA...TCTGAAGTTACCATGTTCTTGACTTTGACCAAAACCCTTTAGAGCACCTCCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | AACATGGTAACTTCAGATGGCTCAAAAAGGTTCAAGAGCATCTTCATTGAACAATCCAGTGGTGGTGGATaGGGGAGCCGCTGCAGATGT | + |
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Preference number: 4 (lower is better) Translates to: NMVTSDGSKRFKSIFIEQSSGGG*GSRCRC Trigger: ACATCTGCAGCGGCTCCCTCATCCACCACCACTGGA...TTGTTCAATGAAGATGCTCTTGAACCTTTTTGAGCCATCTGAAGTTACCATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | GTTTTGGTCAAAGTCAAGAACATGGTAACTTCAGATGGCTCAAAAAGGTTCAAGCATTGTTCACAATCCTaGCAGCCAAACCTTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: VLVKVKNMVTSDGSKRFKHCSQS*QPNLGH Trigger: GTGTCCAAGGTTTGGCTGTCAGGATTGTGAACAATG...CTTGAACCTTTTTGAGCCATCTGAAGTTACCATGTTCTTGACTTTGACCAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | AACATGGTAACTTCAGATGGCTCAAAAAGGTTCAAGAGCATCTTCATTGAACAATGCTTGGCTTTAAATTaGATGAGGGGAGACAGATTG | + |
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Preference number: 4 (lower is better) Translates to: NMVTSDGSKRFKSIFIEQCLALN*MRGDRL Trigger: CAATCTGTCTCCCCTCATTCAATTTAAAGCCAAGCA...TTGTTCAATGAAGATGCTCTTGAACCTTTTTGAGCCATCTGAAGTTACCATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | AACATGGTAACTTCAGATGGCTCAAAAAGGTTCAAGAGCATCTTCATTGAACAAAGGAACTGGTACCGATaGTTGCAGATTTCATTGTTC | + |
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Preference number: 4 (lower is better) Translates to: NMVTSDGSKRFKSIFIEQRNWYR*LQISLF Trigger: GAACAATGAAATCTGCAATCATCGGTACCAGTTCCT...TTGTTCAATGAAGATGCTCTTGAACCTTTTTGAGCCATCTGAAGTTACCATGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR TCA 90 bp | AACATGGTAACTTCAGATGGCTCAAAAAGGTTCAAGAGCATCTTCATTGAACAAACATGTCGTTCCCAATaGACTTTTTCTGGTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NMVTSDGSKRFKSIFIEQTCRSQ*TFSGSS Trigger: TGAAGAACCAGAAAAAGTTCATTGGGAACGACATGT...TTGTTCAATGAAGATGCTCTTGAACCTTTTTGAGCCATCTGAAGTTACCATGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CCA 90 bp | TCTCTTGATCCACTGGGTGAAGTGGGAGGTGCTGGTGTAGACGCTTaGGAATTGGCGACGGCCACAGTCAAAGTTCCAGCTCACCACGCC | + |
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Preference number: 5 (lower is better) Translates to: SLDPLGEVGGAGVDA*ELATATVKVPAHHA Trigger: GGCGTGGTGAGCTGGAACTTTGACTGTGGCCGTCGCCAATTCCCAAGCGTCTACACCAGCACCTCCCACTTCACCCAGTGGATCAAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGTCCTGAAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGTCGCCAATCTGTCTCTaGATCCACTGGGTGAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: SLCPEVLFSLRCPRLLRASPICL*IHWVKW Trigger: CCACTTCACCCAGTGGATCAAGAGACAGATTGGCGA...CGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS GCA 90 bp | GCCACGGCCACTTGCCTACTTCCACCGCCTTCCCATTTACCACCTTaGAGGTTATGTTGGTCTGACCACAGGACCAGATCCAGGGACCTT | + |
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Preference number: 5 (lower is better) Translates to: ATATCLLPPPSHLPP*RLCWSDHRTRSRDL Trigger: AAGGTCCCTGGATCTGGTCCTGTGGTCAGACCAACATAACCTGCAAGGTGGTAAATGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCTGTCCTGAAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCTGAGGGCGATCTGGACCCAGGTCTaGTTCATCTGGCAAACCAGA | + |
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Preference number: 5 (lower is better) Translates to: SLCPEVLFSLRCPRLLRAIWTQV*FIWQTR Trigger: TCTGGTTTGCCAGATGAACAAGACCTGGGTCCAGAT...CGCCCTCAGAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGAGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS GCA 90 bp | AGGGAGCCGCTGCAGATGTACATTCCCAGGAAAAGAATGCTTACCTaGCACGGCCACTTGCCTACTTCCACCGCCTTCCCATTTACCACC | + |
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Preference number: 5 (lower is better) Translates to: REPLQMYIPRKRMLT*HGHLPTSTAFPFTT Trigger: GGTGGTAAATGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAATGTACATCTGCAGCGGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CCA 90 bp | CAGGGAGCCCAAGGATACCAGCAGAATGTAGCCAGTGAGGATGAATaGGCTCAGGAAGGAGGGGACAGCCATGCTGGTAAACTTCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: QGAQGYQQNVASEDE*AQEGGDSHAGKLQV Trigger: GACCTGAAGTTTACCAGCATGGCTGTCCCCTCCTTCCTGAGCCCATTCATCCTCACTGGCTACATTCTGCTGGTATCCTTGGGCTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CAA 90 bp | TCCCCAAGTCCCTCTGTCCTGAAGTCCTGTTCAGCCTCCGGTGTCCACGTCTTCCAAGTGACAGGATACTaGAGCTTCAGGATGGCGATG | + |
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Preference number: 5 (lower is better) Translates to: SPSPSVLKSCSASGVHVFQVTGY*SFRMAM Trigger: CATCGCCATCCTGAAGCTCAAGTATCCTGTCACTTG...GAAGACGTGGACACCGGAGGCTGAACAGGACTTCAGGACAGAGGGACTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CAA 90 bp | CAGTGGGTCAAGGACCCTTCCCCAAGTCCCTCTGTCCTGAAGTCCTGTTCAGCCATGCTTGGCTTTAAATaGAATGAGGGGAGACAGATT | + |
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Preference number: 5 (lower is better) Translates to: QWVKDPSPSPSVLKSCSAMLGFK*NEGRQI Trigger: AATCTGTCTCCCCTCATTCAATTTAAAGCCAAGCAT...GGCTGAACAGGACTTCAGGACAGAGGGACTTGGGGAAGGGTCCTTGACCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS GCA 90 bp | AGATGTACATTCCCAGGAAAAGAATGCTTACCTGCCACGGCCACTTaGCTACTTCCACCGCCTTCCCATTTACCACCTTGCAGGTTATGT | + |
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Preference number: 5 (lower is better) Translates to: RCTFPGKECLPATAT*LLPPPSHLPPCRLC Trigger: ACATAACCTGCAAGGTGGTAAATGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAATGTACATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS-3UTR CAA 90 bp | GAGGGAGGTGCTCTAAAGGGTTTTGGTCAAAGTCAAGAACATGGTAACTTCAGAAGCTCAGAGGTGCTGTaGTCTGGGAGGGTCTGGACT | + |
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Preference number: 5 (lower is better) Translates to: EGGALKGFGQSQEHGNFRSSEVL*SGRVWT Trigger: AGTCCAGACCCTCCCAGACAACAGCACCTCTGAGCT...TCTGAAGTTACCATGTTCTTGACTTTGACCAAAACCCTTTAGAGCACCTCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS TCA 90 bp | TTCAGGATGGCGATGTCGTCAGACATGCGATTGATGAAGTTCTCGTaGATTACAATTCTAGTGACCAGGAGCTCAGAGGTGCTGTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: FRMAMSSDMRLMKFS*ITILVTRSSEVLLS Trigger: AGACAACAGCACCTCTGAGCTCCTGGTCACTAGAATTGTAATTCACGAGAACTTCATCAATCGCATGTCTGACGACATCGCCATCCTGAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CAA 90 bp | GATCCACTGGGTGAAGTGGGAGGTGCTGGTGTAGACGCTTGGGAATaGGCGACGGCCACAGTCAAAGTTCCAGCTCACCACGCCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: DPLGEVGGAGVDAWE*ATATVKVPAHHAHL Trigger: CAGATGGGCGTGGTGAGCTGGAACTTTGACTGTGGCCGTCGCCAATTCCCAAGCGTCTACACCAGCACCTCCCACTTCACCCAGTGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CCA 72 bp | CCACTGGGTGAAGTGGGAGGTGCTGGTGTAGACGCTTaGGAATTGGCGACGGCCACAGTCAAAGTTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PLGEVGGAGVDA*ELATATVKVPA Trigger: AGCTGGAACTTTGACTGTGGCCGTCGCCAATTCCCAAGCGTCTACACCAGCACCTCCCACTTCACCCAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CAA 72 bp | GGTGAAGTGGGAGGTGCTGGTGTAGACGCTTGGGAATaGGCGACGGCCACAGTCAAAGTTCCAGCTCACCAC | + |
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Preference number: 6 (lower is better) Translates to: GEVGGAGVDAWE*ATATVKVPAHH Trigger: GTGGTGAGCTGGAACTTTGACTGTGGCCGTCGCCAATTCCCAAGCGTCTACACCAGCACCTCCCACTTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS GCA 72 bp | TTCCCAGGAAAAGAATGCTTACCTGCCACGGCCACTTaGCTACTTCCACCGCCTTCCCATTTACCACCTTGC | + |
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Preference number: 6 (lower is better) Translates to: FPGKECLPATAT*LLPPPSHLPPC Trigger: GCAAGGTGGTAAATGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS GCA 72 bp | CTGCAGATGTACATTCCCAGGAAAAGAATGCTTACCTaGCACGGCCACTTGCCTACTTCCACCGCCTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LQMYIPRKRMLT*HGHLPTSTAFP Trigger: TGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAATGTACATCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CCA 72 bp | CAAGGATACCAGCAGAATGTAGCCAGTGAGGATGAATaGGCTCAGGAAGGAGGGGACAGCCATGCTGGTAAA | + |
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Preference number: 6 (lower is better) Translates to: QGYQQNVASEDE*AQEGGDSHAGK Trigger: TTTACCAGCATGGCTGTCCCCTCCTTCCTGAGCCCATTCATCCTCACTGGCTACATTCTGCTGGTATCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CAA 72 bp | ATTCCCAGGAAAAGAATGCTTACCTGCCACGGCCACTaGCCTACTTCCACCGCCTTCCCATTTACCACCTTG | + |
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Preference number: 6 (lower is better) Translates to: IPRKRMLTCHGH*PTSTAFPFTTL Trigger: CAAGGTGGTAAATGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CAA 72 bp | ACGACCCAGCACATGGTTCCAATGCTTGGCTTTAAATaGAATGAGGGGAGACAGATTGGCTGGACGAGGGGG | + |
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Preference number: 6 (lower is better) Translates to: TTQHMVPMLGFK*NEGRQIGWTRG Trigger: CCCCCTCGTCCAGCCAATCTGTCTCCCCTCATTCAATTTAAAGCCAAGCATTGGAACCATGTGCTGGGTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CAA 90 bp | CAGATGTACATTCCCAGGAAAAGAATGCTTACCTGCCACGGCCACTaGCCTACTTCCACCGCCTTCCCATTTACCACCTTGCAGGTTATG | + |
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Preference number: 6 (lower is better) Translates to: QMYIPRKRMLTCHGH*PTSTAFPFTTLQVM Trigger: CATAACCTGCAAGGTGGTAAATGGGAAGGCGGTGGAAGTAGGCAAGTGGCCGTGGCAGGTAAGCATTCTTTTCCTGGGAATGTACATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS CCA 72 bp | AATTCTAGTGACCAGGAGCTCAGAGGTGCTGTTGTCTaGGAGGGTCTGGACTCCCACCTTCACAGTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: NSSDQELRGAVV*EGLDSHLHSVF Trigger: AAATACACTGTGAAGGTGGGAGTCCAGACCCTCCCAGACAACAGCACCTCTGAGCTCCTGGTCACTAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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| CDS TCA 72 bp | TTTTTCTGGTTCTTCAGCAGGAGGAACTGGTACCGATaGTTGCAGATTTCATTGTTCACAATCCTGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: FFWFFSRRNWYR*LQISLFTILTA Trigger: GGCTGTCAGGATTGTGAACAATGAAATCTGCAATCATCGGTACCAGTTCCTCCTGCTGAAGAACCAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176403.8 |
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