Pregenerated sensors for PRSS45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047257Ensembl transcript IDs: ENSMUST00000011391.12, ENSMUST00000146794.4
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTCTTAAATTCCAAAATGCTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCCTGACTGTGGGATATaGACAGGCCACCATGCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VLNSKMLLLSNPPLLLVSPDCGI*TGHHAK Trigger: TTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGG...ACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAGCATTTTGGAATTTAAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| 3UTR GCA 72 bp | GTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTaGCAGGATGACAAAGCAGGACCCAAGTTCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VKRGPVTHHSPP*QDDKAGPKFSR Trigger: CCTGGAGAACTTGGGTCCTGCTTTGTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| 3UTR TCA 72 bp | AGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATaGCAAAGCAGGACCCAAGTTCTCCAGGGACCATTC | + |
|
Preference number: 3 (lower is better) Translates to: RPSNPPQPSLPG*QSRTQVLQGPF Trigger: GAATGGTCCCTGGAGAACTTGGGTCCTGCTTTGTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| 3UTR GCA 72 bp | CAAAGCAGGACCCAAGTTCTCCAGGGACCATTCCGTTaGCACCCTGACTGTGGGATATGGACAGGCCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: QSRTQVLQGPFR*HPDCGIWTGHH Trigger: ATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCAACGGAATGGTCCCTGGAGAACTTGGGTCCTGCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| 3UTR CCA 72 bp | CAGGGACCATTCCGTTGCCACCCTGACTGTGGGATATaGACAGGCCACCATGCAAAACAGGAAGAGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGPFRCHPDCGI*TGHHAKQEEEE Trigger: CTCTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCAACGGAATGGTCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | TGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATGACCTGCAGGGCCCCAGCTaGGCCCCATGGCTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WSVKRGPVTHHSPPCQDDLQGPS*APWLTW Trigger: CCAAGTGAGCCATGGGGCGCAGCTGGGGCCCTGCAG...GTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | GCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCGAAGCCAGGAGGTCCTaGAGGGCCCCAGCTGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AIPHFSWSVKRGPVTHHSEARRS*RAPAAP Trigger: GGGCGCAGCTGGGGCCCTGCAGGACCTCCTGGCTTC...GCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | CTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGAAGGCTCACTGGGAGCTaGAGCAGCCAGGGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLVSQARPSNPPQPSLPGRLTGS*SSQGRR Trigger: TCTCCTGCCCTGGCTGCTGCAGCTCCCAGTGAGCCT...TCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATGACAAAGCAGGACCCGAGTGCTGCTTAACCTaGCCCCAGCCAGTCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGPVTHHSPPCQDDKAGPECCLT*PQPVTQ Trigger: CTGGGTGACTGGCTGGGGCCAGGTTAAGCAGCACTC...GGGTCCTGCTTTGTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATGAGTGCTGCTTAACCTaGCCCCAGCCAGTCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWSVKRGPVTHHSPPCQDECCLT*PQPVTQ Trigger: CTGGGTGACTGGCTGGGGCCAGGTTAAGCAGCACTC...ATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | CTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCACCCAGCTGCGCCCCATaGCTCACTTGGTCCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LLLVSQARPSNPPQPSLPPSCAP*LTWSLI Trigger: GATCAAGGACCAAGTGAGCCATGGGGCGCAGCTGGG...TGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACTTGCCCTGGATGCAGTaGGCCGCAGACACCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSNPPLLLVSQARPSNLPWMQ*AADTTQ Trigger: CTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAA...GTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | GGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATGACAAAGCAGGACCCAAGCGGTGTCAACTGGGCTaGGGAGTGCTGCTTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVTHHSPPCQDDKAGPKRCQLG*GVLLNL Trigger: CAGGTTAAGCAGCACTCCTCAGCCCAGTTGACACCG...CTTGGGTCCTGCTTTGTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | GCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCAACTGGGCTGAGGAGTaGTGCTTAACCTGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AIPHFSWSVKRGPVTHHSNWAEE*CLTWPQ Trigger: CTGGGGCCAGGTTAAGCAGCACTCCTCAGCCCAGTT...GCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCCAGCTTCGATCAATaGGGGCTCCTCCACACACGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLSNPPLLLVSQARPSNPSFDQ*GLLHTR Trigger: ACGTGTGTGGAGGAGCCCTCATTGATCGAAGCTGGG...GTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | AAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATGACAAAGCAGGAGCAGGCCTTCTCCCATaGGAATACCCCAGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KRGPVTHHSPPCQDDKAGAGLLP*EYPSQN Trigger: ATTCTGGCTGGGGTATTCTCATGGGAGAAGGCCTGC...TCCTGCTTTGTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | GCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCTGAGTACTCCTTGTTaGCCTGGATGCAGTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: AIPHFSWSVKRGPVTHHSLSTPC*PGCSEP Trigger: CGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAG...GCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACAACTGGGCTGAGGAGTaGTGCTTAACCTGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSNPPLLLVSQARPSNNWAEE*CLTWPQ Trigger: CTGGGGCCAGGTTAAGCAGCACTCCTCAGCCCAGTT...GTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | CTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCTGAGTACTCCTTGTTaGCCTGGATGCAGTGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSNPPLLLVSQARPSNLSTPC*PGCSEP Trigger: CGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAG...GTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | TCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATCAGCCAGAATCCATCTaGCATCGATCTCACAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SWSVKRGPVTHHSPPCQDQPESI*HRSHKP Trigger: TGGCTTGTGAGATCGATGGCAGATGGATTCTGGCTG...ATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAATTCCAAAATGCTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTGAAGCCAGGAGGTCCTaGAGGGCCCCAGCTGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNSKMLLLSNPPLLLVSEARRS*RAPAAP Trigger: GGGCGCAGCTGGGGCCCTGCAGGACCTCCTGGCTTC...ACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAGCATTTTGGAATTTAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | CTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGAGGGGAAGGCTCACTGGGAGCTaGAGCAGCCAGGGCAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTVGYGQATMQNRKRKRGRLTGS*SSQGRR Trigger: TCTCCTGCCCTGGCTGCTGCAGCTCCCAGTGAGCCT...TCCCCTCTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | GTCTTAAATTCCAAAATGCTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCTGCAGGGCCCCAGCTaGGCCCCATGGCTCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNSKMLLLSNPPLLLVSLQGPS*APWLTW Trigger: CCAAGTGAGCCATGGGGCGCAGCTGGGGCCCTGCAG...ACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAGCATTTTGGAATTTAAGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTGTTGAAGTTGTGCTCTaGGAGACAGATGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MLLLSNPPLLLVSQARPSVEVVL*ETDGLH Trigger: GTGCAGCCCATCTGTCTCCCAGAGCACAACTTCAAC...ACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAGCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | CGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGATGACAAAGCAGGACCCATAAGGGGGACAACTTaGGGATACAAGGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGPVTHHSPPCQDDKAGPIRGTT*GYKVFL Trigger: CAAGAAGACCTTGTATCCCCAAGTTGTCCCCCTTAT...GGGTCCTGCTTTGTCATCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | TGCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAACCCAGCTTCGATCAATaGGGGCTCCTCCACACACGT | + |
|
Preference number: 4 (lower is better) Translates to: CHPDCGIWTGHHAKQEEEPSFDQ*GLLHTR Trigger: ACGTGTGTGGAGGAGCCCTCATTGATCGAAGCTGGG...TTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | TTCCGTTGCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAACTGGCCACCAGGGTGTaGCACAAACTGGTTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FRCHPDCGIWTGHHAKQELATRV*HKLVRC Trigger: ACACCGAACCAGTTTGTGGCACACCCTGGTGGCCAG...TTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCAACGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011391.12 |
||
| CDS-3UTR CCA 90 bp | CCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCAGTCCTCCCCATAATTaGTGGTACAGATCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PPLLLVSQARPSNPPQPSSPPHN*WYRSCS Trigger: AGAACATGATCTGTACCACCAATTATGGGGAGGACT...GGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | GCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCGGCTCACTTGGTCCTTaGTCCATATGGTATATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AIPHFSWSVKRGPVTHHSGSLGP*SIWYIW Trigger: CCAAATATACCATATGGATCAAGGACCAAGTGAGCC...GCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | TCTCTGCTCTTGGTCTTAAATTCCAAAATGCTGCTCCTGAGCAATCCCCCACTTTTGCCCTGGATGCAGTaGGCCGCAGACACCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLLVLNSKMLLLSNPPLLPWMQ*AADTTQ Trigger: CTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAA...AAGTGGGGGATTGCTCAGGAGCAGCATTTTGGAATTTAAGACCAAGAGCAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR GCA 90 bp | CGTTGCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGCAGCCAGAATCCATCTaGCATCGATCTCACAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RCHPDCGIWTGHHAKQEEQPESI*HRSHKP Trigger: TGGCTTGTGAGATCGATGGCAGATGGATTCTGGCTG...CTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | TGCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGTTGAAGTTGTGCTCTaGGAGACAGATGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CHPDCGIWTGHHAKQEEEVEVVL*ETDGLH Trigger: GTGCAGCCCATCTGTCTCCCAGAGCACAACTTCAAC...TTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | ATGCTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTATAAGGGGGACAACTTaGGGATACAAGGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MLLLSNPPLLLVSQARPSIRGTT*GYKVFL Trigger: CAAGAAGACCTTGTATCCCCAAGTTGTCCCCCTTAT...ACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | GTCTTAAATTCCAAAATGCTGCTCCTGAGCAATCCCCCACTTCTCCTGGTCAGTCCCAGCTGCGCCCCATaGCTCACTTGGTCCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VLNSKMLLLSNPPLLLVSPSCAP*LTWSLI Trigger: GATCAAGGACCAAGTGAGCCATGGGGCGCAGCTGGG...ACTGACCAGGAGAAGTGGGGGATTGCTCAGGAGCAGCATTTTGGAATTTAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | CCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGAGGGGGGCTCACTTGGTCCTTaGTCCATATGGTATATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PDCGIWTGHHAKQEEEEGGSLGP*SIWYIW Trigger: CCAAATATACCATATGGATCAAGGACCAAGTGAGCC...CCCCTCTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGAGTCCTCCCCATAATTaGTGGTACAGATCATGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVGYGQATMQNRKRKSPPHN*WYRSCS Trigger: AGAACATGATCTGTACCACCAATTATGGGGAGGACT...CTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CCA 90 bp | GCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGTACAAGGTCTTCTTGTaGAAAATGCTGTCACAATTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLTVGYGQATMQNRKRKYKVFL*KMLSQF Trigger: GAATTGTGACAGCATTTTCCACAAGAAGACCTTGTA...CTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR TCA 90 bp | ACAAATTTAATCTCTGCTCTTGGTCTTAAATTCCAAAATGCTGCTCCTGAGCAAGCAGGCCTTCTCCCATaGGAATACCCCAGCCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: TNLISALGLKFQNAAPEQAGLLP*EYPSQN Trigger: ATTCTGGCTGGGGTATTCTCATGGGAGAAGGCCTGC...TTGCTCAGGAGCAGCATTTTGGAATTTAAGACCAAGAGCAGAGATTAAATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 90 bp | CCACGGGAATCTTCAGGGTCCAGGAGGAGCCGTTGGGGTGGAGGGTaGTGCTACCCAACATCACTGAGTACTCCTTGTTGCCCTGGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PRESSGSRRSRWGGG*CYPTSLSTPCCPGC Trigger: GCATCCAGGGCAACAAGGAGTACTCAGTGATGTTGGGTAGCAGCACCCTCCACCCCAACGGCTCCTCCTGGACCCTGAAGATTCCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 90 bp | CGGGAATCTTCAGGGTCCAGGAGGAGCCGTTGGGGTGGAGGGTGCTaGTACCCAACATCACTGAGTACTCCTTGTTGCCCTGGATGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RESSGSRRSRWGGGC*YPTSLSTPCCPGCS Trigger: ACTGCATCCAGGGCAACAAGGAGTACTCAGTGATGTTGGGTAGCAGCACCCTCCACCCCAACGGCTCCTCCTGGACCCTGAAGATTCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 90 bp | AGCCAGGGCAGGAGAAGAAGCCAGGAGGTCCTGCAGGGCCCCAGCTaGGCCCCATGGCTCACTTGGTCCTTGATCCATATGGTATATTTG | + |
|
Preference number: 5 (lower is better) Translates to: SQGRRRSQEVLQGPS*APWLTWSLIHMVYL Trigger: CAAATATACCATATGGATCAAGGACCAAGTGAGCCATGGGGCGCAGCTGGGGCCCTGCAGGACCTCCTGGCTTCTTCTCCTGCCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | CTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGAATGGGCTGCACGTACTaGTTGAAAGTGACAGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLVSQARPSNPPQPSLPGMGCTY*LKVTGV Trigger: AACCCCTGTCACTTTCAACAAGTACGTGCAGCCCAT...TCCTGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 90 bp | TGGGGTGGAGGGTGCTGCTACCCAACATCACTGAGTACTCCTTGTTaGCCTGGATGCAGTGAGCCGCAGACACCACCCAGCTTCGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: WGGGCCYPTSLSTPC*PGCSEPQTPPSFDQ Trigger: TTGATCGAAGCTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAGTGATGTTGGGTAGCAGCACCCTCCACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | CTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCCTGCCAGGCTGCACGTACTTGTaGAAAGTGACAGGGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLLVSQARPSNPPQPSLPGCTYL*KVTGVS Trigger: TGAAACCCCTGTCACTTTCAACAAGTACGTGCAGCC...TGGCAGGGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 90 bp | TGCCCTGGATGCAGTGAGCCGCAGACACCACCCAGCTTCGATCAATaGGGGCTCCTCCACACACGTGCTTATCTTCTATCTGAAGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: CPGCSEPQTPPSFDQ*GLLHTRAYLLSEGS Trigger: CGAGCCTTCAGATAGAAGATAAGCACGTGTGTGGAGGAGCCCTCATTGATCGAAGCTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 90 bp | CTGCTACCCAACATCACTGAGTACTCCTTGTTGCCCTGGATGCAGTaGGCCGCAGACACCACCCAGCTTCGATCAATGAGGGCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPNITEYSLLPWMQ*AADTTQLRSMRAPP Trigger: TGGAGGAGCCCTCATTGATCGAAGCTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAGTGATGTTGGGTAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CCA 90 bp | ATAATGAATACCTCAGCTTCCCAAAGCTCTGGAGCCGGTGTCAACTaGGCTGAGGAGTGCTGCTTAACCTGGCCCCAGCCAGTCACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IMNTSASQSSGAGVN*AEECCLTWPQPVTQ Trigger: CTGGGTGACTGGCTGGGGCCAGGTTAAGCAGCACTCCTCAGCCCAGTTGACACCGGCTCCAGAGCTTTGGGAAGCTGAGGTATTCATTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 90 bp | CTTCGATCAATGAGGGCTCCTCCACACACGTGCTTATCTTCTATCTaGAGGCTCGCTTCCCAGGGCCAGTGGTGGCTCTCCTCCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LRSMRAPPHTCLSSI*RLASQGQWWLSSKL Trigger: CAACTTGGAGGAGAGCCACCACTGGCCCTGGGAAGCGAGCCTTCAGATAGAAGATAAGCACGTGTGTGGAGGAGCCCTCATTGATCGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | CCCCCACTTCTCCTGGTCAGTCAAGCGAGGCCCAGTAACCCACCACAGCCCTCCGGATACAAGGTCTTCTaGTGGAAAATGCTGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PPLLLVSQARPSNPPQPSGYKVF*WKMLSQ Trigger: TTGTGACAGCATTTTCCACAAGAAGACCTTGTATCC...GGAGGGCTGTGGTGGGTTACTGGGCCTCGCTTGACTGACCAGGAGAAGTGGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | TGCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGGCTGCACGTACTTGTaGAAAGTGACAGGGGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CHPDCGIWTGHHAKQEEEGCTYL*KVTGVS Trigger: TGAAACCCCTGTCACTTTCAACAAGTACGTGCAGCC...TTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | GCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGGATAAGGGGGACAACTaGGGGATACAAGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ATLTVGYGQATMQNRKRKDKGDN*GIQGLL Trigger: AAGAAGACCTTGTATCCCCAAGTTGTCCCCCTTATC...CTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | TGCCACCCTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGATAAGGGGGACAACTaGGGGATACAAGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHPDCGIWTGHHAKQEEEDKGDN*GIQGLL Trigger: AAGAAGACCTTGTATCCCCAAGTTGTCCCCCTTATC...TTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAGGGTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | CTGACTGTGGGATATGGACAGGCCACCATGCAAAACAGGAAGAGGAAGAGGGGAGGATACAAGGTCTTCTaGTGGAAAATGCTGTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LTVGYGQATMQNRKRKRGGYKVF*WKMLSQ Trigger: TTGTGACAGCATTTTCCACAAGAAGACCTTGTATCC...TCCCCTCTTCCTCTTCCTGTTTTGCATGGTGGCCTGTCCATATCCCACAGTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | TCTCTGCTCTTGGTCTTAAATTCCAAAATGCTGCTCCTGAGCAATCCCCCACTTATGGGCTGCACGTACTaGTTGAAAGTGACAGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SLLLVLNSKMLLLSNPPLMGCTY*LKVTGV Trigger: AACCCCTGTCACTTTCAACAAGTACGTGCAGCCCAT...AAGTGGGGGATTGCTCAGGAGCAGCATTTTGGAATTTAAGACCAAGAGCAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS-3UTR CAA 90 bp | ACAAATTTAATCTCTGCTCTTGGTCTTAAATTCCAAAATGCTGCTCCTGAGCAAACCTTGAAGTTGAAGTaGTGCTCTGGGAGACAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TNLISALGLKFQNAAPEQTLKLK*CSGRQM Trigger: CATCTGTCTCCCAGAGCACAACTTCAACTTCAAGGT...TTGCTCAGGAGCAGCATTTTGGAATTTAAGACCAAGAGCAGAGATTAAATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 72 bp | AGCTTCCCAAAGCTCTGGAGCCGGTGTCAACTGGGCTaGGGAGTGCTGCTTAACCTGGCCCCAGCCAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SFPKLWSRCQLG*GVLLNLAPASH Trigger: GTGACTGGCTGGGGCCAGGTTAAGCAGCACTCCTCAGCCCAGTTGACACCGGCTCCAGAGCTTTGGGAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CCA 72 bp | ACCTCAGCTTCCCAAAGCTCTGGAGCCGGTGTCAACTaGGCTGAGGAGTGCTGCTTAACCTGGCCCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSASQSSGAGVN*AEECCLTWPQP Trigger: TGGCTGGGGCCAGGTTAAGCAGCACTCCTCAGCCCAGTTGACACCGGCTCCAGAGCTTTGGGAAGCTGAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 72 bp | GGGTGCTGCTACCCAACATCACTGAGTACTCCTTGTTaGCCTGGATGCAGTGAGCCGCAGACACCACCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCCYPTSLSTPC*PGCSEPQTPPS Trigger: GCTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAGTGATGTTGGGTAGCAGCACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 72 bp | ATGAGGGCTCCTCCACACACGTGCTTATCTTCTATCTaGAGGCTCGCTTCCCAGGGCCAGTGGTGGCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: MRAPPHTCLSSI*RLASQGQWWLS Trigger: GGAGAGCCACCACTGGCCCTGGGAAGCGAGCCTTCAGATAGAAGATAAGCACGTGTGTGGAGGAGCCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CCA 72 bp | AGCCAGGAGGTCCTGCAGGGCCCCAGCTGCGCCCCATaGCTCACTTGGTCCTTGATCCATATGGTATATTTG | + |
|
Preference number: 6 (lower is better) Translates to: SQEVLQGPSCAP*LTWSLIHMVYL Trigger: CAAATATACCATATGGATCAAGGACCAAGTGAGCCATGGGGCGCAGCTGGGGCCCTGCAGGACCTCCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 72 bp | TGCAGTGAGCCGCAGACACCACCCAGCTTCGATCAATaGGGGCTCCTCCACACACGTGCTTATCTTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: CSEPQTPPSFDQ*GLLHTRAYLLS Trigger: AGATAGAAGATAAGCACGTGTGTGGAGGAGCCCTCATTGATCGAAGCTGGGTGGTGTCTGCGGCTCACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS TCA 72 bp | AACATCACTGAGTACTCCTTGTTGCCCTGGATGCAGTaGGCCGCAGACACCACCCAGCTTCGATCAATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NITEYSLLPWMQ*AADTTQLRSMR Trigger: CCTCATTGATCGAAGCTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAGTGATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 72 bp | TACCCAACATCACTGAGTACTCCTTGTTGCCCTGGATaGAGTGAGCCGCAGACACCACCCAGCTTCGATCAA | + |
|
Preference number: 6 (lower is better) Translates to: YPTSLSTPCCPG*SEPQTPPSFDQ Trigger: TTGATCGAAGCTGGGTGGTGTCTGCGGCTCACTGCATCCAGGGCAACAAGGAGTACTCAGTGATGTTGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 72 bp | ACCCAGCACTTCGTCCCGACCTTGAAGTTGAAGTTGTaGTCTGGGAGACAGATGGGCTGCACGTACTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TQHFVPTLKLKL*SGRQMGCTYLL Trigger: CAACAAGTACGTGCAGCCCATCTGTCTCCCAGAGCACAACTTCAACTTCAAGGTCGGGACGAAGTGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CAA 72 bp | CAGGGCCCCAGCTGCGCCCCATGGCTCACTTGGTCCTaGATCCATATGGTATATTTGGTGATACGGGTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: QGPSCAPWLTWS*IHMVYLVIRVY Trigger: ATACACCCGTATCACCAAATATACCATATGGATCAAGGACCAAGTGAGCCATGGGGCGCAGCTGGGGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CCA 72 bp | GCACTTCGTCCCGACCTTGAAGTTGAAGTTGTGCTCTaGGAGACAGATGGGCTGCACGTACTTGTTGAAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ALRPDLEVEVVL*ETDGLHVLVES Trigger: ACTTTCAACAAGTACGTGCAGCCCATCTGTCTCCCAGAGCACAACTTCAACTTCAAGGTCGGGACGAAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CAA 72 bp | AAACTGGTTCGGTGTAGTTCTCATTATAACCTAAGTTaGGCCGCGGAGGCAGCAACAGTAGCGCCGCAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: KLVRCSSHYNLS*AAEAATVAPQS Trigger: GCTTTGCGGCGCTACTGTTGCTGCCTCCGCGGCCAAACTTAGGTTATAATGAGAACTACACCGAACCAGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011391.12 |
||
| CDS CAA 90 bp | AGCTGCGCCCCATGGCTCACTTGGTCCTTGATCCATATGGTATATTaGGTGATACGGGTGTATACACTTAGATTCGGTACTGTGGCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SCAPWLTWSLIHMVY*VIRVYTLRFGTVAQ Trigger: CTGCGCCACAGTACCGAATCTAAGTGTATACACCCGTATCACCAAATATACCATATGGATCAAGGACCAAGTGAGCCATGGGGCGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS GCA 72 bp | TTGAAGTTGAAGTTGTGCTCTGGGAGACAGATGGGCTaGACGTACTTGTTGAAAGTGACAGGGGTTTCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LKLKLCSGRQMG*TYLLKVTGVSR Trigger: CCTTGAAACCCCTGTCACTTTCAACAAGTACGTGCAGCCCATCTGTCTCCCAGAGCACAACTTCAACTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CCA 72 bp | GTACAGATCATGTTCTTCCGGATAAGGGGGACAACTTaGGGATACAAGGTCTTCTTGTGGAAAATGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VQIMFFRIRGTT*GYKVFLWKMLS Trigger: TGACAGCATTTTCCACAAGAAGACCTTGTATCCCCAAGTTGTCCCCCTTATCCGGAAGAACATGATCTGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CAA 90 bp | TGGGGATACAAGGTCTTCTTGTGGAAAATGCTGTCACAATTCTTGTaGTCTATAATGAATACCTCAGCTTCCCAAAGCTCTGGAGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: WGYKVFLWKMLSQFL*SIMNTSASQSSGAG Trigger: ACCGGCTCCAGAGCTTTGGGAAGCTGAGGTATTCATTATAGACAACAAGAATTGTGACAGCATTTTCCACAAGAAGACCTTGTATCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||
| CDS CAA 90 bp | ACTTGGGGATACAAGGTCTTCTTGTGGAAAATGCTGTCACAATTCTaGTTGTCTATAATGAATACCTCAGCTTCCCAAAGCTCTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TWGYKVFLWKMLSQF*LSIMNTSASQSSGA Trigger: GGCTCCAGAGCTTTGGGAAGCTGAGGTATTCATTATAGACAACAAGAATTGTGACAGCATTTTCCACAAGAAGACCTTGTATCCCCAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000011391.12 ENSMUST00000146794.4 |
||