Pregenerated sensors for PRSS44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032493Ensembl transcript IDs: ENSMUST00000098345.3, ENSMUST00000141089.2
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTACTCACAGATGGATTCCCACCAGCCTCACACCTCTGCAGGAAATaGCTCCTCTGTCTGTGTGTGGCCACAGATCTCACTGGTATTCTA | + |
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Preference number: 1 (lower is better) Translates to: VLTDGFPPASHLCRK*LLCLCVATDLTGIL Trigger: TAGAATACCAGTGAGATCTGTGGCCACACACAGACAGAGGAGGCATTTCCTGCAGAGGTGTGAGGCTGGTGGGAATCCATCTGTGAGTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR GCA 90 bp | CAATCTCCTGCAGTATTCTCGACGACCTACCTTGTTCAAGTACTTTaGCCCATCCGGTCACCCAGCATAGCGTCCCAGGTTGTACCAAGA | + |
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Preference number: 1 (lower is better) Translates to: QSPAVFSTTYLVQVL*PIRSPSIASQVVPR Trigger: TCTTGGTACAACCTGGGACGCTATGCTGGGTGACCGGATGGGGCAAAGTACTTGAACAAGGTAGGTCGTCGAGAATACTGCAGGAGATTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR GCA 90 bp | AAAAGTTTTGTACTCACAGATGGATTCCCACCAGCCTCACACCTCTaGAGGAAATGCCTCCTCTGTCTGTGTGTGGCCACAGATCTCACT | + |
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Preference number: 1 (lower is better) Translates to: KSFVLTDGFPPASHL*RKCLLCLCVATDLT Trigger: AGTGAGATCTGTGGCCACACACAGACAGAGGAGGCATTTCCTGCAGAGGTGTGAGGCTGGTGGGAATCCATCTGTGAGTACAAAACTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR CCA 90 bp | GGAGAAATCCTGGTGAACGATGATGTCCTGGACTGGAATCCTGACTaGCCTTTTGGACCACAAGTCAGCATCTCCCATGAACACTGCATA | + |
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Preference number: 1 (lower is better) Translates to: GEILVNDDVLDWNPD*PFGPQVSISHEHCI Trigger: TATGCAGTGTTCATGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTCCAGGACATCATCGTTCACCAGGATTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CAA 90 bp | CCACCACAACTTGCGGTGGCCCTGGAGGTGGCTGTGTGGGAACTGTaGAAGGCGGCACCAGACAGGGTTGCTCCCAGGAGGTTGTGTAGC | + |
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Preference number: 2 (lower is better) Translates to: PPQLAVALEVAVWEL*KAAPDRVAPRRLCS Trigger: GCTACACAACCTCCTGGGAGCAACCCTGTCTGGTGCCGCCTTCAACAGTTCCCACACAGCCACCTCCAGGGCCACCGCAAGTTGTGGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCCTCAAACTCTTCCCGACACTTGTATTATTCCATTTTTGCCAAGCGTGGCCCCCAGAATCTCCCTaGCAGGCATCTCCTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: GPLKLFPTLVLFHFCQAWPPESP*QASPPF Trigger: GAAAGGAGGAGATGCCTGCCAGGGAGATTCTGGGGG...CCACGCTTGGCAAAAATGGAATAATACAAGTGTCGGGAAGAGTTTGAGGGGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CAA 90 bp | CTTGTATTATTCCATTTTTGCCAAGCGTGGGTCCTGGAAGCAGTCTaGAGGGCAATGAGCACGGTGGGTCGGGGGAAGTGCCGTATCATT | + |
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Preference number: 2 (lower is better) Translates to: LVLFHFCQAWVLEAV*RAMSTVGRGKCRII Trigger: AATGATACGGCACTTCCCCCGACCCACCGTGCTCATTGCCCTCAAGACTGCTTCCAGGACCCACGCTTGGCAAAAATGGAATAATACAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CAA 90 bp | CAATGGGCCCCTCAAACTCTTCCCGACACTTGTATTATTCCATTTTaGCCAAGCGTGGGTCCTGGAAGCAGTCTTGAGGGCAATGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: QWAPQTLPDTCIIPF*PSVGPGSSLEGNEH Trigger: GTGCTCATTGCCCTCAAGACTGCTTCCAGGACCCACGCTTGGCAAAAATGGAATAATACAAGTGTCGGGAAGAGTTTGAGGGGCCCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACAGACTCCCCCTTCCTGGACCAGGGTAAATATATTCCCCATGATGTCCTTGACTGGAATCCTGACTaGCCTTTTGGACCACAAGTC | + |
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Preference number: 2 (lower is better) Translates to: ATDSPFLDQGKYIPHDVLDWNPD*PFGPQV Trigger: GACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTC...AAGGACATCATGGGGAATATATTTACCCTGGTCCAGGAAGGGGGAGTCTGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCGGTCACCCAGCATAGCGTCCCAGGTTGTACCAAGAAAGACTTTTCAGCAACTGTTCTCATCATaGAGAAATCCTGGTGAACGA | + |
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Preference number: 2 (lower is better) Translates to: PIRSPSIASQVVPRKTFQQLFSS*RNPGER Trigger: TCGTTCACCAGGATTTCTCCATGATGAGAACAGTTG...CTGAAAAGTCTTTCTTGGTACAACCTGGGACGCTATGCTGGGTGACCGGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR-3UTR CCA 90 bp | TGTAATTCACAGGGAAGGCCAGCAGAACAAGGGCGATGTCATGAACAACTGTTCGATGATGTCCTGGACTaGAATCCTGACTGGCCTTTT | + |
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Preference number: 2 (lower is better) Translates to: CNSQGRPAEQGRCHEQLFDDVLD*NPDWPF Trigger: AAAAGGCCAGTCAGGATTCCAGTCCAGGACATCATC...GAACAGTTGTTCATGACATCGCCCTTGTTCTGCTGGCCTTCCCTGTGAATTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATTCACAGGGAAGGCCAGCAGAACAAGGGCGATGTCATGAACAACTGTTCTAGTCAGCATCTCCCATaGACACTGCATAATCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VIHREGQQNKGDVMNNCSSQHLP*TLHNPD Trigger: ATCTGGATTATGCAGTGTTCATGGGAGATGCTGACT...AGAACAGTTGTTCATGACATCGCCCTTGTTCTGCTGGCCTTCCCTGTGAATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR-3UTR TCA 90 bp | ACACATGAGACATGTTTATTCAGTCAACATCTAACATCTATCCTCTCCAAAACTATCCCAAGTAGAATTTaGAGAAAGCATTGGTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: THETCLFSQHLTSILSKTIPSRI*RKHWWG Trigger: TCCCCACCAATGCTTTCTTCAAATTCTACTTGGGAT...AGTTTTGGAGAGGATAGATGTTAGATGTTGACTGAATAAACATGTCTCATGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR GCA 72 bp | GCTGCACGACGTGAGGCCGTTAAATTTGCGGTGCTATaGTACCAGCAATGGGCCCCTCAAACTCTTCCCGAC | + |
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Preference number: 3 (lower is better) Translates to: AARREAVKFAVL*YQQWAPQTLPD Trigger: GTCGGGAAGAGTTTGAGGGGCCCATTGCTGGTAGCATAGCACCGCAAATTTAACGGCCTCACGTCGTGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR GCA 72 bp | GTACTCACAGATGGATTCCCACCAGCCTCACACCTCTaGAGGAAATGCCTCCTCTGTCTGTGTGTGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: VLTDGFPPASHL*RKCLLCLCVAT Trigger: TGTGGCCACACACAGACAGAGGAGGCATTTCCTGCAGAGGTGTGAGGCTGGTGGGAATCCATCTGTGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR GCA 72 bp | AGAGCGCTGCACGACGTGAGGCCGTTAAATTTGCGGTaGTATGCTACCAGCAATGGGCCCCTCAAACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: RALHDVRPLNLR*YATSNGPLKLF Trigger: GAAGAGTTTGAGGGGCCCATTGCTGGTAGCATAGCACCGCAAATTTAACGGCCTCACGTCGTGCAGCGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR TCA 72 bp | CAGATGCTTCATTGCTCTGTTTCCACCAGGAAATGTTaGGCAGGGAAGAGCGCTGCACGACGTGAGGCCGTT | + |
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Preference number: 3 (lower is better) Translates to: QMLHCSVSTRKC*AGKSAARREAV Trigger: AACGGCCTCACGTCGTGCAGCGCTCTTCCCTGCTCAACATTTCCTGGTGGAAACAGAGCAATGAAGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR GCA 72 bp | GCAGTATTCTCGACGACCTACCTTGTTCAAGTACTTTaGCCCATCCGGTCACCCAGCATAGCGTCCCAGGTT | + |
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Preference number: 3 (lower is better) Translates to: AVFSTTYLVQVL*PIRSPSIASQV Trigger: AACCTGGGACGCTATGCTGGGTGACCGGATGGGGCAAAGTACTTGAACAAGGTAGGTCGTCGAGAATACTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CCA 72 bp | AATGAGCACGGTGGGTCGGGGGAAGTGCCGTATCATTaGGAGATGCCACTTCTGTATAAACTCCAGGGTATC | + |
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Preference number: 3 (lower is better) Translates to: NEHGGSGEVPYH*EMPLLYKLQGI Trigger: GATACCCTGGAGTTTATACAGAAGTGGCATCTCCCAATGATACGGCACTTCCCCCGACCCACCGTGCTCATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR-3UTR CAA 90 bp | CCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACTCAGTCAATTTGAAGAAAGCATaGGTGGGGAAATCCGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: PSAHSILMKSVRPGAHSVNLKKA*VGKSGQ Trigger: CTGACCGGATTTCCCCACCAATGCTTTCTTCAAATT...GACTGAGTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR CCA 72 bp | CTGGTGAACGATGATGTCCTGGACTGGAATCCTGACTaGCCTTTTGGACCACAAGTCAGCATCTCCCATGAA | + |
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Preference number: 3 (lower is better) Translates to: LVNDDVLDWNPD*PFGPQVSISHE Trigger: TTCATGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTCCAGGACATCATCGTTCACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR GCA 72 bp | CTCAAACTCTTCCCGACACTTGTATTATTCCATTTTTaGCAAGCGTGGGTCCTGGAAGCAGTCTTGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: LKLFPTLVLFHF*QAWVLEAVLRA Trigger: TGCCCTCAAGACTGCTTCCAGGACCCACGCTTGGCAAAAATGGAATAATACAAGTGTCGGGAAGAGTTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CAA 72 bp | TTCCATTTTTGCCAAGCGTGGGTCCTGGAAGCAGTCTaGAGGGCAATGAGCACGGTGGGTCGGGGGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: FHFCQAWVLEAV*RAMSTVGRGKC Trigger: GCACTTCCCCCGACCCACCGTGCTCATTGCCCTCAAGACTGCTTCCAGGACCCACGCTTGGCAAAAATGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR TCA 90 bp | GACAGACCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACTCTCAGGCATCCCTGTaGGTGGCCTCTCTTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: DRPSAHSILMKSVRPGAHSQASL*VASLVG Trigger: ACCCACAAGAGAGGCCACTCACAGGGATGCCTGAGA...GTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGGTCTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR GCA 90 bp | GTACTCACAGATGGATTCCCACCAGCCTCACACCTCTGCAGGAAATGCCTCCTCCCACCACAGATGTGCTaGTTGTGGACCTGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VLTDGFPPASHLCRKCLLPPQMC*LWTCRL Trigger: GAGCCTGCAGGTCCACAAGCAGCACATCTGTGGTGG...GAGGAGGCATTTCCTGCAGAGGTGTGAGGCTGGTGGGAATCCATCTGTGAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CCA 90 bp | AAAACTGCACCACCACAACTTGCGGTGGCCCTGGAGGTGGCTGTGTGGGAACTGAGGCATCCCTGTGAGTaGCCTCTCTTGTGGGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: KTAPPQLAVALEVAVWELRHPCE*PLLWVY Trigger: GTAAACCCACAAGAGAGGCCACTCACAGGGATGCCT...CAGTTCCCACACAGCCACCTCCAGGGCCACCGCAAGTTGTGGTGGTGCAGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CCA 90 bp | GTACTCACAGATGGATTCCCACCAGCCTCACACCTCTGCAGGAAATGCCTCCTCCCCCCAGAATCTCCCTaGCAGGCATCTCCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: VLTDGFPPASHLCRKCLLPPESP*QASPPF Trigger: GAAAGGAGGAGATGCCTGCCAGGGAGATTCTGGGGG...GAGGAGGCATTTCCTGCAGAGGTGTGAGGCTGGTGGGAATCCATCTGTGAGTAC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR TCA 90 bp | GTACTCACAGATGGATTCCCACCAGCCTCACACCTCTGCAGGAAATGCCTCCTCTCTGTGGCCACAAGCTaGAGTGGGTGGAACCCATGT | + |
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Preference number: 4 (lower is better) Translates to: VLTDGFPPASHLCRKCLLSVATS*SGWNPC Trigger: ACATGGGTTCCACCCACTTCAGCTTGTGGCCACAGA...GAGGAGGCATTTCCTGCAGAGGTGTGAGGCTGGTGGGAATCCATCTGTGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR GCA 90 bp | CCACCTGGCAGGCCAGATAGTCCTCTATCGGGAAGTGGGCCACAATCCTTCACTCTTGTTCAAGTACTTTaGCCCATCCGGTCACCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PPGRPDSPLSGSGPQSFTLVQVL*PIRSPS Trigger: GCTGGGTGACCGGATGGGGCAAAGTACTTGAACAAG...AGTGAAGGATTGTGGCCCACTTCCCGATAGAGGACTATCTGGCCTGCCAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CCA 90 bp | GACAGACCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACGAGTGGCCTCTCTTGTaGGTTTACACCCGAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: DRPSAHSILMKSVRPGAHEWPLL*VYTRVI Trigger: GATGACTCGGGTGTAAACCCACAAGAGAGGCCACTC...GTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGGTCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR TCA 90 bp | ACTGGAATCCTGACTGGCCTTTTGGACCACAAGTCAGCATCTCCCATGAACACTTCTCAGGCATCCCTGTaGGTGGCCTCTCTTGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: TGILTGLLDHKSASPMNTSQASL*VASLVG Trigger: ACCCACAAGAGAGGCCACTCACAGGGATGCCTGAGA...AGTGTTCATGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR CCA 90 bp | CCCATCCGGTCACCCAGCATAGCGTCCCAGGTTGTACCAAGAAAGACTTTTCAGAGGCATCCCTGTGAGTaGCCTCTCTTGTGGGTTTAC | + |
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Preference number: 4 (lower is better) Translates to: PIRSPSIASQVVPRKTFQRHPCE*PLLWVY Trigger: GTAAACCCACAAGAGAGGCCACTCACAGGGATGCCT...CTGAAAAGTCTTTCTTGGTACAACCTGGGACGCTATGCTGGGTGACCGGATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR CCA 90 bp | AGCCTCACACCTCTGCAGGAAATGCCTCCTCTGTCTGTGTGTGGCCACAGATCTATCCTTGCAGTTCTGTaGCCACAAGCTGAAGTGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLTPLQEMPPLSVCGHRSILAVL*PQAEVG Trigger: ACCCACTTCAGCTTGTGGCCACAGAACTGCAAGGAT...AGATCTGTGGCCACACACAGACAGAGGAGGCATTTCCTGCAGAGGTGTGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACTCAGTCGACTGGAATCCTGACTaGCCTTTTGGACCACAAGTC | + |
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Preference number: 4 (lower is better) Translates to: PSAHSILMKSVRPGAHSVDWNPD*PFGPQV Trigger: GACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTC...GACTGAGTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR CAA 72 bp | CAGCTCAATCTCCTGCAGTATTCTCGACGACCTACCTaGTTCAAGTACTTTGCCCCATCCGGTCACCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QLNLLQYSRRPT*FKYFAPSGHPA Trigger: TGCTGGGTGACCGGATGGGGCAAAGTACTTGAACAAGGTAGGTCGTCGAGAATACTGCAGGAGATTGAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACTCAGTCGATGATGTCCTGGACTaGAATCCTGACTGGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PSAHSILMKSVRPGAHSVDDVLD*NPDWPF Trigger: AAAAGGCCAGTCAGGATTCCAGTCCAGGACATCATC...GACTGAGTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR TCA 90 bp | CCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACTCAGTCAGTCAGCATCTCCCATaGACACTGCATAATCCAGAT | + |
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Preference number: 4 (lower is better) Translates to: PSAHSILMKSVRPGAHSVSQHLP*TLHNPD Trigger: ATCTGGATTATGCAGTGTTCATGGGAGATGCTGACT...GACTGAGTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CCA 90 bp | ACTGGAATCCTGACTGGCCTTTTGGACCACAAGTCAGCATCTCCCATGAACACTGAGTGGCCTCTCTTGTaGGTTTACACCCGAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: TGILTGLLDHKSASPMNTEWPLL*VYTRVI Trigger: GATGACTCGGGTGTAAACCCACAAGAGAGGCCACTC...AGTGTTCATGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CAA 72 bp | ACGATGATGTCCTGGACTGGAATCCTGACTGGCCTTTaGGACCACAAGTCAGCATCTCCCATGAACACTGCA | + |
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Preference number: 4 (lower is better) Translates to: TMMSWTGILTGL*DHKSASPMNTA Trigger: TGCAGTGTTCATGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTCCAGGACATCATCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| 3UTR CAA 72 bp | CTACCAGCAATGGGCCCCTCAAACTCTTCCCGACACTaGTATTATTCCATTTTTGCCAAGCGTGGGTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPAMGPSNSSRH*YYSIFAKRGSW Trigger: CCAGGACCCACGCTTGGCAAAAATGGAATAATACAAGTGTCGGGAAGAGTTTGAGGGGCCCATTGCTGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR GCA 90 bp | GACAGACCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACCTCACGATCCCTACCTaGACCCACGTTTTATTAAAT | + |
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Preference number: 4 (lower is better) Translates to: DRPSAHSILMKSVRPGAHLTIPT*THVLLN Trigger: ATTTAATAAAACGTGGGTGCAGGTAGGGATCGTGAG...GTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGGTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CCA 90 bp | AGCATTGGTGGGGAAATCCGGTCAGGGGAGAAGCTAGTGAAGGCTCAGAAACAATGTCCATATACACAGTaGGCTGCTGTAATCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: SIGGEIRSGEKLVKAQKQCPYTQ*AAVITH Trigger: GTGGGTGATTACAGCAGCCCACTGTGTATATGGACA...TTGTTTCTGAGCCTTCACTAGCTTCTCCCCTGACCGGATTTCCCCACCAATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| 3UTR CAA 72 bp | CCTCAAACTCTTCCCGACACTTGTATTATTCCATTTTaGCCAAGCGTGGGTCCTGGAAGCAGTCTTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: PQTLPDTCIIPF*PSVGPGSSLEG Trigger: GCCCTCAAGACTGCTTCCAGGACCCACGCTTGGCAAAAATGGAATAATACAAGTGTCGGGAAGAGTTTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR TCA 90 bp | AGCATTGGTGGGGAAATCCGGTCAGGGGAGAAGCTAGTGAAGGCTCAGAAACAAACAAGGGCGATGTCATaGACAACTGTTCTCATCATG | + |
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Preference number: 4 (lower is better) Translates to: SIGGEIRSGEKLVKAQKQTRAMS*TTVLIM Trigger: CATGATGAGAACAGTTGTTCATGACATCGCCCTTGT...TTGTTTCTGAGCCTTCACTAGCTTCTCCCCTGACCGGATTTCCCCACCAATGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR TCA 90 bp | TTTTCCAAGATAACTCACAAGATGAGTTATCTCCCTCCACCTGGCAGGCCAGATACACGGGCTGGATGTTaGCGCTGTAATTCACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FSKITHKMSYLPPPGRPDTRAGC*RCNSQG Trigger: TCCCTGTGAATTACAGCGTCAACATCCAGCCCGTGT...ATCTGGCCTGCCAGGTGGAGGGAGATAACTCATCTTGTGAGTTATCTTGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR TCA 90 bp | CCACCTGGCAGGCCAGATAGTCCTCTATCGGGAAGTGGGCCACAATCCTTCACTTGGTTACATTTCTCATaGCGGATAATATTCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PPGRPDSPLSGSGPQSFTWLHFS*RIIFSS Trigger: TGAGCTGAATATTATCCGTCATGAGAAATGTAACCA...AGTGAAGGATTGTGGCCCACTTCCCGATAGAGGACTATCTGGCCTGCCAGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR GCA 90 bp | GTAATTCACAGGGAAGGCCAGCAGAACAAGGGCGATGTCATGAACAACTGTTCTTCCACCAACTATCCTTaGAGTTCTGTGGCCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: VIHREGQQNKGDVMNNCSSTNYP*SSVATS Trigger: GCTTGTGGCCACAGAACTGCAAGGATAGTTGGTGGA...AGAACAGTTGTTCATGACATCGCCCTTGTTCTGCTGGCCTTCCCTGTGAATTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR GCA 90 bp | TTCCTGGACCAGGGTAAATATATTCCCCATGATGTCCTTGAGAATCTGGTTACACCACCACAGATGTGCTaGTTGTGGACCTGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: FLDQGKYIPHDVLENLVTPPQMC*LWTCRL Trigger: GAGCCTGCAGGTCCACAAGCAGCACATCTGTGGTGG...TGTAACCAGATTCTCAAGGACATCATGGGGAATATATTTACCCTGGTCCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR CCA 90 bp | ACCTCTGCAGGAAATGCCTCCTCTGTCTGTGTGTGGCCACAGATCTCACTGGTACAACTGTTCTCATCATaGAGAAATCCTGGTGAACGA | + |
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Preference number: 4 (lower is better) Translates to: TSAGNASSVCVWPQISLVQLFSS*RNPGER Trigger: TCGTTCACCAGGATTTCTCCATGATGAGAACAGTTG...TACCAGTGAGATCTGTGGCCACACACAGACAGAGGAGGCATTTCCTGCAGAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR GCA 90 bp | TTTTCCAAGATAACTCACAAGATGAGTTATCTCCCTCCACCTGGCAGGCCAGATTCCACCAACTATCCTTaGAGTTCTGTGGCCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: FSKITHKMSYLPPPGRPDSTNYP*SSVATS Trigger: GCTTGTGGCCACAGAACTGCAAGGATAGTTGGTGGA...ATCTGGCCTGCCAGGTGGAGGGAGATAACTCATCTTGTGAGTTATCTTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR TCA 90 bp | GGGCCCCTCAAACTCTTCCCGACACTTGTATTATTCCATTTTTGCCAAGCGTGGATGGTTGAAAAAGATTaGCCTGGAGTAAATGCCATC | + |
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Preference number: 4 (lower is better) Translates to: GPLKLFPTLVLFHFCQAWMVEKD*PGVNAI Trigger: GATGGCATTTACTCCAGGTCAATCTTTTTCAACCAT...CCACGCTTGGCAAAAATGGAATAATACAAGTGTCGGGAAGAGTTTGAGGGGCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR TCA 90 bp | TTTTCCAAGATAACTCACAAGATGAGTTATCTCCCTCCACCTGGCAGGCCAGATATGGTTGAAAAAGATTaGCCTGGAGTAAATGCCATC | + |
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Preference number: 4 (lower is better) Translates to: FSKITHKMSYLPPPGRPDMVEKD*PGVNAI Trigger: GATGGCATTTACTCCAGGTCAATCTTTTTCAACCAT...ATCTGGCCTGCCAGGTGGAGGGAGATAACTCATCTTGTGAGTTATCTTGGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CAA 90 bp | CCACCTGGCAGGCCAGATAGTCCTCTATCGGGAAGTGGGCCACAATCCTTCACTTGTGAGTGGCCTCTCTaGTGGGTTTACACCCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: PPGRPDSPLSGSGPQSFTCEWPL*WVYTRV Trigger: GACTCGGGTGTAAACCCACAAGAGAGGCCACTCACA...AGTGAAGGATTGTGGCCCACTTCCCGATAGAGGACTATCTGGCCTGCCAGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS CCA 90 bp | TTCCTCGCTGGCGCAGGCCTTCCACCAACTATCCTTGCAGTTCTGTaGCCACAAGCTGAAGTGGGTGGAACCCATGTTGGAAACGGTTGT | + |
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Preference number: 5 (lower is better) Translates to: FLAGAGLPPTILAVL*PQAEVGGTHVGNGC Trigger: ACAACCGTTTCCAACATGGGTTCCACCCACTTCAGCTTGTGGCCACAGAACTGCAAGGATAGTTGGTGGAAGGCCTGCGCCAGCGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS-3UTR CAA 90 bp | ATGCTACCAGCAATGGGCCCCTCAAACTCTTCCCGACACTTGTATTATTCCATTTGTGAGTGGCCTCTCTaGTGGGTTTACACCCGAGTC | + |
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Preference number: 5 (lower is better) Translates to: MLPAMGPSNSSRHLYYSICEWPL*WVYTRV Trigger: GACTCGGGTGTAAACCCACAAGAGAGGCCACTCACA...AATGGAATAATACAAGTGTCGGGAAGAGTTTGAGGGGCCCATTGCTGGTAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS-3UTR CAA 90 bp | GACAGACCCAGTGCCCACTCAATCCTGATGAAATCAGTTAGACCCGGTGCCCACTTGACAGACTCATGGTaGAAAAAGATTGACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: DRPSAHSILMKSVRPGAHLTDSW*KKIDLE Trigger: CTCCAGGTCAATCTTTTTCAACCATGAGTCTGTCAA...GTGGGCACCGGGTCTAACTGATTTCATCAGGATTGAGTGGGCACTGGGTCTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098345.3 |
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| CDS-3UTR CAA 90 bp | TCCTGGACTGGAATCCTGACTGGCCTTTTGGACCACAAGTCAGCATCTCCCATGTTGACAGACTCATGGTaGAAAAAGATTGACCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SWTGILTGLLDHKSASPMLTDSW*KKIDLE Trigger: CTCCAGGTCAATCTTTTTCAACCATGAGTCTGTCAA...CATGGGAGATGCTGACTTGTGGTCCAAAAGGCCAGTCAGGATTCCAGTCCAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141089.2 |
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| CDS TCA 72 bp | CAGGCTTGCGGGGCAACGAGGTCTCAGGCATCCCTGTaGGTGGCCTCTCTTGTGGGTTTACACCCGAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: QACGATRSQASL*VASLVGLHPSH Trigger: ATGACTCGGGTGTAAACCCACAAGAGAGGCCACTCACAGGGATGCCTGAGACCTCGTTGCCCCGCAAGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS CCA 72 bp | GGCGCAGGCCTTCCACCAACTATCCTTGCAGTTCTGTaGCCACAAGCTGAAGTGGGTGGAACCCATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GAGLPPTILAVL*PQAEVGGTHVG Trigger: TCCAACATGGGTTCCACCCACTTCAGCTTGTGGCCACAGAACTGCAAGGATAGTTGGTGGAAGGCCTGCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS CAA 72 bp | ACTTCCTCGCTGGCGCAGGCCTTCCACCAACTATCCTaGCAGTTCTGTGGCCACAAGCTGAAGTGGGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: TSSLAQAFHQLS*QFCGHKLKWVE Trigger: TTCCACCCACTTCAGCTTGTGGCCACAGAACTGCAAGGATAGTTGGTGGAAGGCCTGCGCCAGCGAGGAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS CAA 72 bp | TTCTGTGGCCACAAGCTGAAGTGGGTGGAACCCATGTaGGAAACGGTTGTCTTGACAGACTCATGGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: FCGHKLKWVEPM*ETVVLTDSWLK Trigger: TTTCAACCATGAGTCTGTCAAGACAACCGTTTCCAACATGGGTTCCACCCACTTCAGCTTGTGGCCACAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS CAA 90 bp | TCCTTGCAGTTCTGTGGCCACAAGCTGAAGTGGGTGGAACCCATGTaGGAAACGGTTGTCTTGACAGACTCATGGTTGAAAAAGATTGAC | + |
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Preference number: 6 (lower is better) Translates to: SLQFCGHKLKWVEPM*ETVVLTDSWLKKID Trigger: GTCAATCTTTTTCAACCATGAGTCTGTCAAGACAACCGTTTCCAACATGGGTTCCACCCACTTCAGCTTGTGGCCACAGAACTGCAAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS CAA 72 bp | CTGAAGTGGGTGGAACCCATGTTGGAAACGGTTGTCTaGACAGACTCATGGTTGAAAAAGATTGACCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LKWVEPMLETVV*TDSWLKKIDLE Trigger: CTCCAGGTCAATCTTTTTCAACCATGAGTCTGTCAAGACAACCGTTTCCAACATGGGTTCCACCCACTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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| CDS TCA 72 bp | AACGGTTGTCTTGACAGACTCATGGTTGAAAAAGATTaGCCTGGAGTAAATGCCATCGAATCAAGGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: NGCLDRLMVEKD*PGVNAIESRGL Trigger: GAGGCCCCTTGATTCGATGGCATTTACTCCAGGTCAATCTTTTTCAACCATGAGTCTGTCAAGACAACCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098345.3 ENSMUST00000141089.2 |
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