Pregenerated sensors for PRSS42 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044664Ensembl transcript IDs: ENSMUST00000035715.8
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCACTGTGGCTCTCTCTGGGGCAAGGGATTTGAAGAAAGGGCATTaGGAAGGTCAAACAAGAGGGGCTCTAAAGAGGATAGGAATGAGA | + |
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Preference number: 1 (lower is better) Translates to: FTVALSGARDLKKGH*EGQTRGALKRIGMR Trigger: TCTCATTCCTATCCTCTTTAGAGCCCCTCTTGTTTGACCTTCCCAATGCCCTTTCTTCAAATCCCTTGCCCCAGAGAGAGCCACAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CCA 90 bp | TTTCAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTaGGGCAAGGGATTTGAAGAAAGGGCATTGGGAAGGTCAAACAAG | + |
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Preference number: 1 (lower is better) Translates to: FQVSQIPDIFHCGSL*GKGFEERALGRSNK Trigger: CTTGTTTGACCTTCCCAATGCCCTTTCTTCAAATCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR-3UTR CCA 90 bp | CACAACTCAGGAGTGCTGTGGCCAAGGATGGTGACCAGAGCACCAGGCAGAACACGACATATTTCACTGTaGCTCTCTCTGGGGCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: HNSGVLWPRMVTRAPGRTRHISL*LSLGQG Trigger: CCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCG...TGTTCTGCCTGGTGCTCTGGTCACCATCCTTGGCCACAGCACTCCTGAGTTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CAA 90 bp | TTTCACTGTGGCTCTCTCTGGGGCAAGGGATTTGAAGAAAGGGCATaGGGAAGGTCAAACAAGAGGGGCTCTAAAGAGGATAGGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: FHCGSLWGKGFEERA*GRSNKRGSKEDRNE Trigger: CTCATTCCTATCCTCTTTAGAGCCCCTCTTGTTTGACCTTCCCAATGCCCTTTCTTCAAATCCCTTGCCCCAGAGAGAGCCACAGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAGAGCACCAGGCAGAACACTTTCAAGTCTCTCAGATCCCCGACATATTTCTTGAAGAAAGGGCATTaGGAAGGTCAAACAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: DQSTRQNTFKSLRSPTYFLKKGH*EGQTRG Trigger: CCCTCTTGTTTGACCTTCCCAATGCCCTTTCTTCAA...GAAATATGTCGGGGATCTGAGAGACTTGAAAGTGTTCTGCCTGGTGCTCTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CCA 72 bp | CGTTACTGCCAGGCAGAGCACAACTCAGGAGTGCTGTaGCCAAGGATGGTGACCAGAGCACCAGGCAGAACA | + |
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Preference number: 3 (lower is better) Translates to: RYCQAEHNSGVL*PRMVTRAPGRT Trigger: TGTTCTGCCTGGTGCTCTGGTCACCATCCTTGGCCACAGCACTCCTGAGTTGTGCTCTGCCTGGCAGTAACG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR GCA 72 bp | GGTGAGTTCCCTGAAACCACAGCTATGCCTAGCACTTaGCCCTCCCCTGATGACATCCTTGCTGAGGTCACT | + |
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Preference number: 3 (lower is better) Translates to: GEFPETTAMPST*PSPDDILAEVT Trigger: AGTGACCTCAGCAAGGATGTCATCAGGGGAGGGGCAAGTGCTAGGCATAGCTGTGGTTTCAGGGAACTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CCA 72 bp | TCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTaGGGCAAGGGATTTGAAGAAAGGGCATTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SQIPDIFHCGSL*GKGFEERALGR Trigger: CCTTCCCAATGCCCTTTCTTCAAATCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTGGGGCAAGGGAGAGTACAGAGGCGGCTaGCCAGGCCTCGCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QVSQIPDIFHCGSLWGKGEYRGG*PGLAGL Trigger: AAGCCCTGCGAGGCCTGGGCAGCCGCCTCTGTACTC...TCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CAA 72 bp | CTATGCCTAGCACTTGCCCCTCCCCTGATGACATCCTaGCTGAGGTCACTGCGATTGACCTGGCAGGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LCLALAPPLMTS*LRSLRLTWQAS Trigger: ACTGGCCTGCCAGGTCAATCGCAGTGACCTCAGCAAGGATGTCATCAGGGGAGGGGCAAGTGCTAGGCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR CCA 90 bp | CAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTGGGGCAAGGGACCTCCAGAATCTCCCTaGCAGGCGTCCTTTCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: QVSQIPDIFHCGSLWGKGPPESP*QASFPL Trigger: AAGAGGAAAGGACGCCTGCCAGGGAGATTCTGGAGG...TCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CAA 72 bp | CCTCCCCTGATGACATCCTTGCTGAGGTCACTGCGATaGACCTGGCAGGCCAGTTTGTCTTCTAACTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PPLMTSLLRSLR*TWQASLSSNWN Trigger: GTTCCAGTTAGAAGACAAACTGGCCTGCCAGGTCAATCGCAGTGACCTCAGCAAGGATGTCATCAGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR GCA 90 bp | CACAACTCAGGAGTGCTGTGGCCAAGGATGGTGACCAGAGCACCAGGCAGAACAAGGAAGACCACTGGATaGAAACAATCTGCCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HNSGVLWPRMVTRAPGRTRKTTG*KQSAWF Trigger: GAACCAGGCAGATTGTTTGCATCCAGTGGTCTTCCT...TGTTCTGCCTGGTGCTCTGGTCACCATCCTTGGCCACAGCACTCCTGAGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR TCA 90 bp | CCTAGCACTTGCCCCTCCCCTGATGACATCCTTGCTGAGGTCACTGCGATTGACCAGGGTGTTGGAGCTTaGGAAGAGCAATATCATTTT | + |
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Preference number: 4 (lower is better) Translates to: PSTCPSPDDILAEVTAIDQGVGA*EEQYHF Trigger: AAAATGATATTGCTCTTCTCAAGCTCCAACACCCTG...GTCAATCGCAGTGACCTCAGCAAGGATGTCATCAGGGGAGGGGCAAGTGCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR TCA 90 bp | CAGAACACTTTCAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTTCGCAGGGCTTTGGCTaGAGGAGCAAGAGGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: QNTFKSLRSPTYFTVALSSQGFG*RSKRKT Trigger: AGTCTTCCTCTTGCTCCTTCAGCCAAAGCCCTGCGA...AGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTGAAAGTGTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR CCA 90 bp | ATGACATCCTTGCTGAGGTCACTGCGATTGACCTGGCAGGCCAGTTTGTCTTCTTGCAAACAATCTGCCTaGTTCACCACGGCAATTAGC | + |
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Preference number: 4 (lower is better) Translates to: MTSLLRSLRLTWQASLSSCKQSA*FTTAIS Trigger: GCTAATTGCCGTGGTGAACCAGGCAGATTGTTTGCA...AGAAGACAAACTGGCCTGCCAGGTCAATCGCAGTGACCTCAGCAAGGATGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| 3UTR CAA 72 bp | ACATATTTCACTGTGGCTCTCTCTGGGGCAAGGGATTaGAAGAAAGGGCATTGGGAAGGTCAAACAAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: TYFTVALSGARD*KKGHWEGQTRG Trigger: CCCTCTTGTTTGACCTTCCCAATGCCCTTTCTTCAAATCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR GCA 90 bp | CAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTGGGGCAAGGGACTCACAACTCCTACCTaGACCCATTTGTTTTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: QVSQIPDIFHCGSLWGKGLTTPT*THLFSN Trigger: ATTTGAAAACAAATGGGTGCAGGTAGGAGTTGTGAG...TCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR GCA 90 bp | GCAAGGGATTTGAAGAAAGGGCATTGGGAAGGTCAAACAAGAGGGGCTCTAAAGTGGATGCAAACAATCTaGCTGGTTCACCACGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: ARDLKKGHWEGQTRGALKWMQTI*LVHHGN Trigger: ATTGCCGTGGTGAACCAGGCAGATTGTTTGCATCCA...CTTTAGAGCCCCTCTTGTTTGACCTTCCCAATGCCCTTTCTTCAAATCCCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR TCA 90 bp | ATAAAGAAAACAATTATAGTTAGGACACATAAGCGCTCTGTGTGTGTGTGTGTGGCAAGAGGAAGACTATaGGGCCCAGGGAGCCACCTC | + |
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Preference number: 4 (lower is better) Translates to: IKKTIIVRTHKRSVCVCVARGRL*GPGSHL Trigger: GAGGTGGCTCCCTGGGCCTCATAGTCTTCCTCTTGC...CACACACACACACACAGAGCGCTTATGTGTCCTAACTATAATTGTTTTCTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR TCA 90 bp | CAGATCCCCGACATATTTCACTGTGGCTCTCTCTGGGGCAAGGGATTTGAAGAAAACGACGATAGTTGTTaGGAACTTAGGGTGGACAAA | + |
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Preference number: 4 (lower is better) Translates to: QIPDIFHCGSLWGKGFEENDDSC*ELRVDK Trigger: TTTGTCCACCCTAAGTTCTCAACAACTATCGTCGTT...TTCTTCAAATCCCTTGCCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR CCA 90 bp | ACCAGAGCACCAGGCAGAACACTTTCAAGTCTCTCAGATCCCCGACATATTTCAGTTGAGAACTTAGGGTaGACAAAGATGGTCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: TRAPGRTLSSLSDPRHISVENLG*TKMVLM Trigger: CATCAAGACCATCTTTGTCCACCCTAAGTTCTCAAC...TGAAATATGTCGGGGATCTGAGAGACTTGAAAGTGTTCTGCCTGGTGCTCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR TCA 90 bp | ATAAAGAAAACAATTATAGTTAGGACACATAAGCGCTCTGTGTGTGTGTGTGTGATTCCTCATAAAGGATaGCATTTTGGTCCACCTCCT | + |
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Preference number: 4 (lower is better) Translates to: IKKTIIVRTHKRSVCVCVIPHKG*HFGPPP Trigger: AGGAGGTGGACCAAAATGTCATCCTTTATGAGGAAT...CACACACACACACACAGAGCGCTTATGTGTCCTAACTATAATTGTTTTCTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CCA 90 bp | GGAAGTAGAGAGTACAGAGGCGGCTGCCCAGGCCTCGCAGGGCTTTaGCTGAAGGAGCAAGAGGAAGACTATGAGGCCCAGGGAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: GSREYRGGCPGLAGL*LKEQEEDYEAQGAT Trigger: GGTGGCTCCCTGGGCCTCATAGTCTTCCTCTTGCTCCTTCAGCCAAAGCCCTGCGAGGCCTGGGCAGCCGCCTCTGTACTCTCTACTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS GCA 90 bp | AGGGAACCTCCACAGACATGCATGTGCCTGACCCGAACGCTCACCTaGCAAGGCCACTTCCCCTCTTCAGCGTCTACCCCTCCCATGATC | + |
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Preference number: 5 (lower is better) Translates to: REPPQTCMCLTRTLT*QGHFPSSASTPPMI Trigger: GATCATGGGAGGGGTAGACGCTGAAGAGGGGAAGTGGCCTTGGCAGGTGAGCGTTCGGGTCAGGCACATGCATGTCTGTGGAGGTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS TCA 90 bp | TCACCAGACTTGTATTCTGTCGGTAGACACTCCGATCGCCCACCTTaGCGTTGTACTGGATTCGGCTGTAAATACAATGGGCGGCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: SPDLYSVGRHSDRPP*RCTGFGCKYNGRQS Trigger: TGACTGCCGCCCATTGTATTTACAGCCGAATCCAGTACAACGTCAAGGTGGGCGATCGGAGTGTCTACCGACAGAATACAAGTCTGGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR CAA 90 bp | ACACTTTCAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTGGGGTGGGAATCACCAGACTaGTATTCTGTCGGTAGACAC | + |
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Preference number: 5 (lower is better) Translates to: TLSSLSDPRHISLWLSLGWESPD*YSVGRH Trigger: GTGTCTACCGACAGAATACAAGTCTGGTGATTCCCA...CCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTGAAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR CAA 90 bp | ACACTTTCAAGTCTCTCAGATCCCCGACATATTTCACTGTGGCTCTCTCTGGGGCCTACCTGCACCCATTaGTTTTCAAATTCACAGGAC | + |
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Preference number: 5 (lower is better) Translates to: TLSSLSDPRHISLWLSLGPTCTH*FSNSQD Trigger: GTCCTGTGAATTTGAAAACAAATGGGTGCAGGTAGG...CCCCAGAGAGAGCCACAGTGAAATATGTCGGGGATCTGAGAGACTTGAAAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS TCA 90 bp | TCCTGTCACCCAACATTTGGTCCCAGCTTTTACAGGAAAACTCTCTaGAGGGATGCAGACAGGGTATATGTTAGTGGTGAAATTCACAGG | + |
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Preference number: 5 (lower is better) Translates to: SCHPTFGPSFYRKTL*RDADRVYVSGEIHR Trigger: CCTGTGAATTTCACCACTAACATATACCCTGTCTGCATCCCTTCAGAGAGTTTTCCTGTAAAAGCTGGGACCAAATGTTGGGTGACAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS-3UTR CAA 90 bp | AAGGGATTTGAAGAAAGGGCATTGGGAAGGTCAAACAAGAGGGGCTCTAAAGAGATAAAGGATGACATTTaGGTCCACCTCCTGGAGGAT | + |
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Preference number: 5 (lower is better) Translates to: KGFEERALGRSNKRGSKEIKDDI*VHLLED Trigger: ATCCTCCAGGAGGTGGACCAAAATGTCATCCTTTAT...CTCTTTAGAGCCCCTCTTGTTTGACCTTCCCAATGCCCTTTCTTCAAATCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS TCA 90 bp | TTGGAGCTTGAGAAGAGCAATATCATTTTTAACGACGATAGTTGTTaGGAACTTAGGGTGGACAAAGATGGTCTTGATGGGAATCACCAG | + |
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Preference number: 5 (lower is better) Translates to: LELEKSNIIFNDDSC*ELRVDKDGLDGNHQ Trigger: CTGGTGATTCCCATCAAGACCATCTTTGTCCACCCTAAGTTCTCAACAACTATCGTCGTTAAAAATGATATTGCTCTTCTCAAGCTCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CCA 90 bp | AGAGCAATATCATTTTTAACGACGATAGTTGTTGAGAACTTAGGGTaGACAAAGATGGTCTTGATGGGAATCACCAGACTTGTATTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RAISFLTTIVVENLG*TKMVLMGITRLVFC Trigger: ACAGAATACAAGTCTGGTGATTCCCATCAAGACCATCTTTGTCCACCCTAAGTTCTCAACAACTATCGTCGTTAAAAATGATATTGCTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CCA 72 bp | GAGTACAGAGGCGGCTGCCCAGGCCTCGCAGGGCTTTaGCTGAAGGAGCAAGAGGAAGACTATGAGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: EYRGGCPGLAGL*LKEQEEDYEAQ Trigger: CTGGGCCTCATAGTCTTCCTCTTGCTCCTTCAGCCAAAGCCCTGCGAGGCCTGGGCAGCCGCCTCTGTACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CAA 90 bp | CCACACACTAAGGAAAAGTTCATGAAAGGAGAGCGGGTGGTAGCCTaGGACATGCGCACCCGGGTGGGTGGCGGTGGGTTGTCCCTCGGG | + |
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Preference number: 6 (lower is better) Translates to: PHTKEKFMKGERVVA*DMRTRVGGGGLSLG Trigger: CCCGAGGGACAACCCACCGCCACCCACCCGGGTGCGCATGTCCAAGGCTACCACCCGCTCTCCTTTCATGAACTTTTCCTTAGTGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS GCA 72 bp | CCACAGACATGCATGTGCCTGACCCGAACGCTCACCTaGCAAGGCCACTTCCCCTCTTCAGCGTCTACCCCT | + |
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Preference number: 6 (lower is better) Translates to: PQTCMCLTRTLT*QGHFPSSASTP Trigger: AGGGGTAGACGCTGAAGAGGGGAAGTGGCCTTGGCAGGTGAGCGTTCGGGTCAGGCACATGCATGTCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CAA 72 bp | AAGGAAAAGTTCATGAAAGGAGAGCGGGTGGTAGCCTaGGACATGCGCACCCGGGTGGGTGGCGGTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: KEKFMKGERVVA*DMRTRVGGGGL Trigger: CAACCCACCGCCACCCACCCGGGTGCGCATGTCCAAGGCTACCACCCGCTCTCCTTTCATGAACTTTTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS GCA 72 bp | AGCGAACACAGCAGTAAGACGAGGAAGACCACTGGATaGAAACAATCTGCCTGGTTCACCACGGCAATTAGC | + |
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Preference number: 6 (lower is better) Translates to: SEHSSKTRKTTG*KQSAWFTTAIS Trigger: GCTAATTGCCGTGGTGAACCAGGCAGATTGTTTGCATCCAGTGGTCTTCCTCGTCTTACTGCTGTGTTCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS TCA 72 bp | TTGTATTCTGTCGGTAGACACTCCGATCGCCCACCTTaGCGTTGTACTGGATTCGGCTGTAAATACAATGGG | + |
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Preference number: 6 (lower is better) Translates to: LYSVGRHSDRPP*RCTGFGCKYNG Trigger: CCCATTGTATTTACAGCCGAATCCAGTACAACGTCAAGGTGGGCGATCGGAGTGTCTACCGACAGAATACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CCA 72 bp | TCAGCGTCTACCCCTCCCATGATCTTCATAAAGGGTTaGCCACACACTAAGGAAAAGTTCATGAAAGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SASTPPMIFIKG*PHTKEKFMKGE Trigger: CTCTCCTTTCATGAACTTTTCCTTAGTGTGTGGCCAACCCTTTATGAAGATCATGGGAGGGGTAGACGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS TCA 72 bp | ACAGACCATGCCTCTCTTGACGAGATCCACAGAACTTaGGGTAGCTTTCTTCAGCATCTCATTACATTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TDHASLDEIHRT*GSFLQHLITFL Trigger: GAGGAATGTAATGAGATGCTGAAGAAAGCTACCTCAAGTTCTGTGGATCTCGTCAAGAGAGGCATGGTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS TCA 72 bp | CCAACATTTGGTCCCAGCTTTTACAGGAAAACTCTCTaGAGGGATGCAGACAGGGTATATGTTAGTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: PTFGPSFYRKTL*RDADRVYVSGE Trigger: TTCACCACTAACATATACCCTGTCTGCATCCCTTCAGAGAGTTTTCCTGTAAAAGCTGGGACCAAATGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CAA 90 bp | AGGGATGCAGACAGGGTATATGTTAGTGGTGAAATTCACAGGGTGTaGGAGCTTGAGAAGAGCAATATCATTTTTAACGACGATAGTTGT | + |
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Preference number: 6 (lower is better) Translates to: RDADRVYVSGEIHRV*ELEKSNIIFNDDSC Trigger: ACAACTATCGTCGTTAAAAATGATATTGCTCTTCTCAAGCTCCAACACCCTGTGAATTTCACCACTAACATATACCCTGTCTGCATCCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CAA 90 bp | CAGACAGGGTATATGTTAGTGGTGAAATTCACAGGGTGTTGGAGCTaGAGAAGAGCAATATCATTTTTAACGACGATAGTTGTTGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: QTGYMLVVKFTGCWS*RRAISFLTTIVVEN Trigger: GTTCTCAACAACTATCGTCGTTAAAAATGATATTGCTCTTCTCAAGCTCCAACACCCTGTGAATTTCACCACTAACATATACCCTGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CCA 72 bp | TCATTTTTAACGACGATAGTTGTTGAGAACTTAGGGTaGACAAAGATGGTCTTGATGGGAATCACCAGACTT | + |
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Preference number: 6 (lower is better) Translates to: SFLTTIVVENLG*TKMVLMGITRL Trigger: AAGTCTGGTGATTCCCATCAAGACCATCTTTGTCCACCCTAAGTTCTCAACAACTATCGTCGTTAAAAATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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| CDS CAA 72 bp | TATATGTTAGTGGTGAAATTCACAGGGTGTTGGAGCTaGAGAAGAGCAATATCATTTTTAACGACGATAGTT | + |
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Preference number: 6 (lower is better) Translates to: YMLVVKFTGCWS*RRAISFLTTIV Trigger: AACTATCGTCGTTAAAAATGATATTGCTCTTCTCAAGCTCCAACACCCTGTGAATTTCACCACTAACATATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035715.8 |
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