Pregenerated sensors for PRSS41 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024114Ensembl transcript IDs: ENSMUST00000024926.14, ENSMUST00000151797.3
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTCAAAGAGACTGTCCTCAGAAGGTCTTAAGCACCCATTCTGGCTaGGGAATGCAAGCCTGGCTGAGTCCCTTCCTGCATCTCTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: CQRDCPQKVLSTHSG*GMQAWLSPFLHLWP Trigger: TGGCCAGAGATGCAGGAAGGGACTCAGCCAGGCTTGCATTCCTCAGCCAGAATGGGTGCTTAAGACCTTCTGAGGACAGTCTCTTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR CCA 90 bp | TCAGTGTCAAAGAGACTGTCCTCAGAAGGTCTTAAGCACCCATTCTaGCTGAGGAATGCAAGCCTGGCTGAGTCCCTTCCTGCATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SVSKRLSSEGLKHPF*LRNASLAESLPASL Trigger: CAGAGATGCAGGAAGGGACTCAGCCAGGCTTGCATTCCTCAGCCAGAATGGGTGCTTAAGACCTTCTGAGGACAGTCTCTTTGACACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR TCA 90 bp | GCTATGGAGTCCAGGATATTGAGCATAGGATTAGACATGAACTCCTaGCCTTCCTGGCTTCCCTTCCCAAGGGCTGGTCTTATACCACAA | + |
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Preference number: 1 (lower is better) Translates to: AMESRILSIGLDMNS*PSWLPFPRAGLIPQ Trigger: TTGTGGTATAAGACCAGCCCTTGGGAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAATCCTATGCTCAATATCCTGGACTCCATAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR GCA 90 bp | GACCACAAACTGTATTTCACTTATGGGCAGAAAACAATGGTTCCGTaGTCAGAAAGCTGGGTTGTGGTTATCAGGGGCTGTAGGGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: DHKLYFTYGQKTMVP*SESWVVVIRGCREG Trigger: TCCCTCCCTACAGCCCCTGATAACCACAACCCAGCTTTCTGAGCACGGAACCATTGTTTTCTGCCCATAAGTGAAATACAGTTTGTGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR TCA 90 bp | ATGCACAATGAGTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTaGAGCAAGCTATCCCTACAGTATATGGACTGTCCTGGGGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: MHNEFIGKEDKTRAW*SKLSLQYMDCPGAA Trigger: TGCAGCCCCAGGACAGTCCATATACTGTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAACTCATTGTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| 3UTR CCA 90 bp | ACCCATAGGACCACAAACTGTATTTCACTTATGGGCAGAAAACAATaGTTCCGTGCTCAGAAAGCTGGGTTGTGGTTATCAGGGGCTGTA | + |
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Preference number: 1 (lower is better) Translates to: THRTTNCISLMGRKQ*FRAQKAGLWLSGAV Trigger: TACAGCCCCTGATAACCACAACCCAGCTTTCTGAGCACGGAACCATTGTTTTCTGCCCATAAGTGAAATACAGTTTGTGGTCCTATGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR TCA 90 bp | AACTTAGAGAGAAGCAGTTCCCACTACTGCCACAAGGGGCAACATTaGGGACAGTACATTACATTTAAGAATCCCGACCATTTTTCTCTG | + |
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Preference number: 1 (lower is better) Translates to: NLERSSSHYCHKGQH*GQYITFKNPDHFSL Trigger: CAGAGAAAAATGGTCGGGATTCTTAAATGTAATGTACTGTCCTCAATGTTGCCCCTTGTGGCAGTAGTGGGAACTGCTTCTCTCTAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR TCA 90 bp | TGTAGGGAGGGACTCATGAGGAGTAAAGGCCGGGTGGGAATGAAGGTCCCTAGTGAATGCAAGCCTGGCTaGGTCCCTTCCTGCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: CREGLMRSKGRVGMKVPSECKPG*VPSCIS Trigger: AGAGATGCAGGAAGGGACTCAGCCAGGCTTGCATTC...ACTAGGGACCTTCATTCCCACCCGGCCTTTACTCCTCATGAGTCCCTCCCTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGTCTGGGCTGCCAAGGGCTACAGGTCCTAGGGACATGAGGAGATTGAGACTTAAGCACCCATTCTaGCTGAGGAATGCAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: SRSGLPRATGPRDMRRLRLKHPF*LRNASL Trigger: CAGGCTTGCATTCCTCAGCCAGAATGGGTGCTTAAG...TCTCAATCTCCTCATGTCCCTAGGACCTGTAGCCCTTGGCAGCCCAGACCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR TCA 90 bp | CCAAGACAGGGTTTTTATTTATGTAATCCTGGAACTTGCTCTGTAGACCAGGCTAGCACCCATTCTGGCTaGGGAATGCAAGCCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PRQGFYLCNPGTCSVDQASTHSG*GMQAWL Trigger: CAGCCAGGCTTGCATTCCTCAGCCAGAATGGGTGCT...AGCCTGGTCTACAGAGCAAGTTCCAGGATTACATAAATAAAAACCCTGTCTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR TCA 90 bp | GATATTGAGCATAGGATTAGACATGAACTCCTGACCTTCCTGGCTTCCCTTCCCATGACCTCACCACTCTaGACACGCCTGATCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: DIEHRIRHELLTFLASLPMTSPL*TRLILK Trigger: CTTCAAGATCAGGCGTGTTCAGAGTGGTGAGGTCAT...GGGAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAATCCTATGCTCAATATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR TCA 90 bp | ACAAGGGGCAACATTGAGGACAGTACATTACATTTAAGAATCCCGACCATTTTTAGGCAGCTAAGAGCCTaGAAGCAGGTCTGGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TRGNIEDSTLHLRIPTIFRQLRA*KQVWAA Trigger: GGCAGCCCAGACCTGCTTTCAGGCTCTTAGCTGCCT...AAAAATGGTCGGGATTCTTAAATGTAATGTACTGTCCTCAATGTTGCCCCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR TCA 90 bp | CCACAAACTGTATTTCACTTATGGGCAGAAAACAATGGTTCCGTGCTCAGAAAGTTAGACATGAACTCCTaGCCTTCCTGGCTTCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PQTVFHLWAENNGSVLRKLDMNS*PSWLPF Trigger: GAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAA...CTTTCTGAGCACGGAACCATTGTTTTCTGCCCATAAGTGAAATACAGTTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGTTCCCACTACTGCCACAAGGGGCAACATTGAGGACAGTACATTACATTTACCACAATGCCCACTaGGGTTTTTGCTTTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: KQFPLLPQGATLRTVHYIYHNAH*GFCFLF Trigger: AAACAAAAAGCAAAAACCTCAGTGGGCATTGTGGTA...AATGTAATGTACTGTCCTCAATGTTGCCCCTTGTGGCAGTAGTGGGAACTGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR CCA 72 bp | CAAGAGCCTGGTGAAGCAAGCTATCCCTACAGTATATaGACTGTCCTGGGGCTGCAGAGAGTGCAAAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: QEPGEASYPYSI*TVLGLQRVQSC Trigger: GCAGCTTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGATAGCTTGCTTCACCAGGCTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| 3UTR CCA 72 bp | AAGAGACTGTCCTCAGAAGGTCTTAAGCACCCATTCTaGCTGAGGAATGCAAGCCTGGCTGAGTCCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: KRLSSEGLKHPF*LRNASLAESLP Trigger: AGGAAGGGACTCAGCCAGGCTTGCATTCCTCAGCCAGAATGGGTGCTTAAGACCTTCTGAGGACAGTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR TCA 72 bp | TCCAGGATATTGAGCATAGGATTAGACATGAACTCCTaGCCTTCCTGGCTTCCCTTCCCAAGGGCTGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: SRILSIGLDMNS*PSWLPFPRAGL Trigger: AAGACCAGCCCTTGGGAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAATCCTATGCTCAATATCCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR CAA 90 bp | TCCCTAGTTGAACAGTATTGTCAACACACTAAATGGGGTTGGAGCACACTCTTTAGGGACATGAGGAGATaGAGAGAAATGGCGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SLVEQYCQHTKWGWSTLFRDMRR*REMAEG Trigger: CCCCTCCGCCATTTCTCTCAATCTCCTCATGTCCCT...AAAGAGTGTGCTCCAACCCCATTTAGTGTGTTGACAATACTGTTCAACTAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR CAA 90 bp | GATATTGAGCATAGGATTAGACATGAACTCCTGACCTTCCTGGCTTCCCTTCCCGAAATGATGAAAATGTaGCACTTAGACAGAGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: DIEHRIRHELLTFLASLPEMMKM*HLDRGD Trigger: GTCACCTCTGTCTAAGTGCAACATTTTCATCATTTC...GGGAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAATCCTATGCTCAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR-3UTR CAA 90 bp | TCCCTAGTTGAACAGTATTGTCAACACACTAAATGGGGTTGGAGCACACTCTTTAGGCTGGTCTCAAACTaGCTATGGAGTCCAGGATAT | + |
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Preference number: 3 (lower is better) Translates to: SLVEQYCQHTKWGWSTLFRLVSN*LWSPGY Trigger: ATATCCTGGACTCCATAGCAAGTTTGAGACCAGCCT...AAAGAGTGTGCTCCAACCCCATTTAGTGTGTTGACAATACTGTTCAACTAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR GCA 72 bp | TTGTTTGTTTTAGACAGCCCAGGCTGGTCTCAAACTTaGTATGGAGTCCAGGATATTGAGCATAGGATTAGA | + |
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Preference number: 3 (lower is better) Translates to: LFVLDSPGWSQT*YGVQDIEHRIR Trigger: TCTAATCCTATGCTCAATATCCTGGACTCCATAGCAAGTTTGAGACCAGCCTGGGCTGTCTAAAACAAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR CCA 72 bp | ACCACAAACTGTATTTCACTTATGGGCAGAAAACAATaGTTCCGTGCTCAGAAAGCTGGGTTGTGGTTATCA | + |
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Preference number: 3 (lower is better) Translates to: TTNCISLMGRKQ*FRAQKAGLWLS Trigger: TGATAACCACAACCCAGCTTTCTGAGCACGGAACCATTGTTTTCTGCCCATAAGTGAAATACAGTTTGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR CCA 72 bp | TTTGTTTTGTGTTTGTTTGTTTTAGACAGCCCAGGCTaGTCTCAAACTTGCTATGGAGTCCAGGATATTGAG | + |
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Preference number: 3 (lower is better) Translates to: FVLCLFVLDSPG*SQTCYGVQDIE Trigger: CTCAATATCCTGGACTCCATAGCAAGTTTGAGACCAGCCTGGGCTGTCTAAAACAAACAAACACAAAACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR CCA 72 bp | AGGTCCCTAGTTGAACAGTATTGTCAACACACTAAATaGGGTTGGAGCACACTCTTTGTATGGTTCCTTAAT | + |
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Preference number: 3 (lower is better) Translates to: RSLVEQYCQHTK*GWSTLFVWFLN Trigger: ATTAAGGAACCATACAAAGAGTGTGCTCCAACCCCATTTAGTGTGTTGACAATACTGTTCAACTAGGGACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| 3UTR CCA 72 bp | CTAGTTGAACAGTATTGTCAACACACTAAATGGGGTTaGAGCACACTCTTTGTATGGTTCCTTAATGGTATG | + |
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Preference number: 3 (lower is better) Translates to: LVEQYCQHTKWG*STLFVWFLNGM Trigger: CATACCATTAAGGAACCATACAAAGAGTGTGCTCCAACCCCATTTAGTGTGTTGACAATACTGTTCAACTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | AGCAGGTCTGGGCTGCCAAGGGCTACAGGTCCTAGGGACATGAGGAGATTGAGAGCACCCAGCGGCGGCTaGGAAGGCTCCCTCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SRSGLPRATGPRDMRRLRAPSGG*EGSLRS Trigger: GCTGCGGAGGGAGCCTTCTCAGCCGCCGCTGGGTGC...TCTCAATCTCCTCATGTCCCTAGGACCTGTAGCCCTTGGCAGCCCAGACCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR GCA 90 bp | AAGCAAGCTATCCCTACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGCAAAAAGCGCAGGCTGGCCTaGCACGGCCAGCGCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KQAIPTVYGLSWGCRECKKRRLA*HGQRPC Trigger: GCAAGGGCGCTGGCCGTGGCAGGCCAGCCTGCGCTT...TTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGATAGCTTGCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR TCA 90 bp | GTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACAGCACCCAGCGGCGGCTaGGAAGGCTCCCTCCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VYWQRRQDKSLVKQAIPTAPSGG*EGSLRS Trigger: GCTGCGGAGGGAGCCTTCTCAGCCGCCGCTGGGTGC...TGTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR TCA 90 bp | ACTCCTGACCTTCCTGGCTTCCCTTCCCAAGGGCTGGTCTTATACCACAATGCCAGGGCCTGCTGTGGCTaGAACAGGGGACAGATAGCA | + |
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Preference number: 4 (lower is better) Translates to: TPDLPGFPSQGLVLYHNARACCG*NRGQIA Trigger: TGCTATCTGTCCCCTGTTTCAGCCACAGCAGGCCCT...GGCATTGTGGTATAAGACCAGCCCTTGGGAAGGGAAGCCAGGAAGGTCAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR GCA 90 bp | TACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGCAAAGCTGCAGCCTCATGCAGCACCTGGGCTGGTaGTGGGACGTAAAGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: YSIWTVLGLQRVQSCSLMQHLGW*WDVKVE Trigger: TTCCACCTTTACGTCCCAGCACCAGCCCAGGTGCTG...CATGAGGCTGCAGCTTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR GCA 90 bp | GAACTCCTGACCTTCCTGGCTTCCCTTCCCAAGGGCTGGTCTTATACCACAATGCAGAAGGCAGCTCCATaGAGGTGGGAAGCAATGGGG | + |
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Preference number: 4 (lower is better) Translates to: ELLTFLASLPKGWSYTTMQKAAP*RWEAMG Trigger: CCCCATTGCTTCCCACCTGCATGGAGCTGCCTTCTG...CATTGTGGTATAAGACCAGCCCTTGGGAAGGGAAGCCAGGAAGGTCAGGAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | GGGCAGAAAACAATGGTTCCGTGCTCAGAAAGCTGGGTTGTGGTTATCAGGGGCGCGGCCACAGGGCATTaGGAGAAGCTTGATGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: GQKTMVPCSESWVVVIRGAATGH*EKLDVC Trigger: ACAGACATCAAGCTTCTCTCAATGCCCTGTGGCCGC...GCCCCTGATAACCACAACCCAGCTTTCTGAGCACGGAACCATTGTTTTCTGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | CAAGCTATCCCTACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGCAAAGCTAGGAGCCAGGGAGCCTaGAGCAGAGTGATAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: QAIPTVYGLSWGCRECKARSQGA*SRVIDS Trigger: GCTGTCTATCACTCTGCTTCAGGCTCCCTGGCTCCT...AGCTTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGATAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CCA 90 bp | GATATTGAGCATAGGATTAGACATGAACTCCTGACCTTCCTGGCTTCCCTTCCCGGGAAGCAATGGGGGTaGGGGCTGAGCAGGAAGGCA | + |
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Preference number: 4 (lower is better) Translates to: DIEHRIRHELLTFLASLPGKQWG*GLSRKA Trigger: TGCCTTCCTGCTCAGCCCCCACCCCCATTGCTTCCC...GGGAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAATCCTATGCTCAATATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR GCA 90 bp | GGTGAAGCAAGCTATCCCTACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGTGTGCTCTTGAGATCTaGCGCCTGGCTTTCTTCACG | + |
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Preference number: 4 (lower is better) Translates to: GEASYPYSIWTVLGLQRVCALEI*RLAFFT Trigger: CGTGAAGAAAGCCAGGCGGCAGATCTCAAGAGCACA...CACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGATAGCTTGCTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CCA 90 bp | GATATTGAGCATAGGATTAGACATGAACTCCTGACCTTCCTGGCTTCCCTTCCCCACCTGGGCTGGTGCTaGGACGTAAAGGTGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: DIEHRIRHELLTFLASLPHLGWC*DVKVEG Trigger: GCCTTCCACCTTTACGTCCCAGCACCAGCCCAGGTG...GGGAAGGGAAGCCAGGAAGGTCAGGAGTTCATGTCTAATCCTATGCTCAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | ATCCCTACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGCAAAGCTGCAGCCCTCACAATTCCGATCTaGTACCAGAGACCATCCATG | + |
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Preference number: 4 (lower is better) Translates to: IPTVYGLSWGCRECKAAALTIPI*YQRPSM Trigger: CATGGATGGTCTCTGGTATCAGATCGGAATTGTGAG...GGCTGCAGCTTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR GCA 90 bp | TTTGTTTTGTGTTTGTTTGTTTTAGACAGCCCAGGCTGGTCTCAAACTTGCTATAAGCGCAGGCTGGCCTaGCACGGCCAGCGCCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: FVLCLFVLDSPGWSQTCYKRRLA*HGQRPC Trigger: GCAAGGGCGCTGGCCGTGGCAGGCCAGCCTGCGCTT...ATAGCAAGTTTGAGACCAGCCTGGGCTGTCTAAAACAAACAAACACAAAACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR GCA 90 bp | AAGCAAGCTATCCCTACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGCAAAAGAGACCATCCATGTTaGAGACCAAGGGTCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: KQAIPTVYGLSWGCRECKRDHPC*RPRVLL Trigger: CAGGAGGACCCTTGGTCTGCAACATGGATGGTCTCT...TTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGATAGCTTGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CCA 90 bp | TATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACAGTACACCTGGGCTGGTGCTaGGACGTAAAGGTGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: YWQRRQDKSLVKQAIPTVHLGWC*DVKVEG Trigger: GCCTTCCACCTTTACGTCCCAGCACCAGCCCAGGTG...TACTGTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CCA 90 bp | AGTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACACCCAGCACCTGGGCTaGTGCTGGGACGTAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SLLAKKTRQEPGEASYPYTQHLG*CWDVKV Trigger: CACCTTTACGTCCCAGCACCAGCCCAGGTGCTGGGT...GTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CCA 90 bp | ATCCCTACAGTATATGGACTGTCCTGGGGCTGCAGAGAGTGCAAAGCTGCAGCCTCCTTGGTGATCAAGTaGTGTAGGGAGAAAATCTCG | + |
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Preference number: 4 (lower is better) Translates to: IPTVYGLSWGCRECKAAASLVIK*CREKIS Trigger: CGAGATTTTCTCCCTACACCACTTGATCACCAAGGA...GGCTGCAGCTTTGCACTCTCTGCAGCCCCAGGACAGTCCATATACTGTAGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| 3UTR CAA 72 bp | CTGCCAAGGGCTACAGGTCCTAGGGACATGAGGAGATaGAGAGAAATGGCGGAGGGGTATGAAGTTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LPRATGPRDMRR*REMAEGYEVFL Trigger: CAAGAAAACTTCATACCCCTCCGCCATTTCTCTCAATCTCCTCATGTCCCTAGGACCTGTAGCCCTTGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | TTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACAGTTGTCCTTGTTGTAGGTaGCCGAGGAGGCCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LLAKKTRQEPGEASYPYSCPCCR*PRRPAS Trigger: TGAGGCTGGCCTCCTCGGTCACCTACAACAAGGACA...ACTGTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR GCA 90 bp | GTTTTAGACAGCCCAGGCTGGTCTCAAACTTGCTATGGAGTCCAGGATATTGAGGATAGCACACCCACATaGCCACCCTGCGTTGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: VLDSPGWSQTCYGVQDIEDSTPT*PPCVAN Trigger: ATTAGCAACGCAGGGTGGGCATGTGGGTGTGCTATC...CTCAATATCCTGGACTCCATAGCAAGTTTGAGACCAGCCTGGGCTGTCTAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR CCA 90 bp | ACAAGGGGCAACATTGAGGACAGTACATTACATTTAAGAATCCCGACCATTTTTGCAGGTGGGAAGCAATaGGGGTGGGGGCTGAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: TRGNIEDSTLHLRIPTIFAGGKQ*GWGLSR Trigger: CCTGCTCAGCCCCCACCCCCATTGCTTCCCACCTGC...AAAAATGGTCGGGATTCTTAAATGTAATGTACTGTCCTCAATGTTGCCCCTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | ATGAGTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCGCGGCCACAGGGCATTaGGAGAAGCTTGATGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: MSLLAKKTRQEPGEASYPAATGH*EKLDVC Trigger: ACAGACATCAAGCTTCTCTCAATGCCCTGTGGCCGC...GGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAACTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR TCA 90 bp | ACAATGAGTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATGGCTTCAAATCCTCCTaGAGGACTCCCCAGCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: TMSLLAKKTRQEPGEASYGFKSS*RTPQPV Trigger: GACCGGCTGGGGAGTCCTTCAGGAGGATTTGAAGCC...ATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAACTCATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR GCA 90 bp | TCCCTAGTTGAACAGTATTGTCAACACACTAAATGGGGTTGGAGCACACTCTTTCAGCACCTGGGCTGGTaGTGGGACGTAAAGGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLVEQYCQHTKWGWSTLFQHLGW*WDVKVE Trigger: TTCCACCTTTACGTCCCAGCACCAGCCCAGGTGCTG...AAAGAGTGTGCTCCAACCCCATTTAGTGTGTTGACAATACTGTTCAACTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR CCA 90 bp | TATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACAGTAAGCAGGGCCAGGTCATaGGACTTCAGCTTGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: YWQRRQDKSLVKQAIPTVSRARS*DFSLSS Trigger: CGAAGACAAGCTGAAGTCCCATGACCTGGCCCTGCT...TACTGTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR GCA 90 bp | GTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACAGTAAAGGTGGAAGGCTaGACACAGACAGGCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: VYWQRRQDKSLVKQAIPTVKVEG*TQTGWM Trigger: CATCCAGCCTGTCTGTGTGCAGCCTTCCACCTTTAC...TGTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR GCA 90 bp | CCACAAACTGTATTTCACTTATGGGCAGAAAACAATGGTTCCGTGCTCAGAAAGTGTGCTCTTGAGATCTaGCGCCTGGCTTTCTTCACG | + |
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Preference number: 4 (lower is better) Translates to: PQTVFHLWAENNGSVLRKCALEI*RLAFFT Trigger: CGTGAAGAAAGCCAGGCGGCAGATCTCAAGAGCACA...CTTTCTGAGCACGGAACCATTGTTTTCTGCCCATAAGTGAAATACAGTTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR TCA 90 bp | AGTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATCCCTACAGAACACATCCTTGGTaGTCAAGTGGTGTAGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLLAKKTRQEPGEASYPYRTHPW*SSGVGR Trigger: TCTCCCTACACCACTTGATCACCAAGGATGTGTTCT...GTAGGGATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CCA 90 bp | ACAAGGGGCAACATTGAGGACAGTACATTACATTTAAGAATCCCGACCATTTTTAGCAGGGCCAGGTCATaGGACTTCAGCTTGTCTTCG | + |
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Preference number: 4 (lower is better) Translates to: TRGNIEDSTLHLRIPTIFSRARS*DFSLSS Trigger: CGAAGACAAGCTGAAGTCCCATGACCTGGCCCTGCT...AAAAATGGTCGGGATTCTTAAATGTAATGTACTGTCCTCAATGTTGCCCCTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR CCA 90 bp | CATGATAATGGTGACAGTTTCACTGGTGTTAAAATGTGTGATTTCAACACTGCTAAGGCAGGAGGCTCTTaGAGCTCCAGAGCCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HDNGDSFTGVKMCDFNTAKAGGS*SSRARE Trigger: TTCTCTGGCTCTGGAGCTCCAAGAGCCTCCTGCCTT...AGCAGTGTTGAAATCACACATTTTAACACCAGTGAAACTGTCACCATTATCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS-3UTR GCA 90 bp | TGCTCATGTTCATACTTTAGGGCTTGTAAATTAAATCAGTGTCAAAGAGACTGTCCCACATGCCCACCCTaGGTTGCTAATCTCACTCAA | + |
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Preference number: 4 (lower is better) Translates to: CSCSYFRACKLNQCQRDCPTCPP*VANLTQ Trigger: TTGAGTGAGATTAGCAACGCAGGGTGGGCATGTGGG...ACAGTCTCTTTGACACTGATTTAATTTACAAGCCCTAAAGTATGAACATGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS GCA 90 bp | AGGCTCCCTCCGCAGCGGTGGGACTTCTTCAAGCGCAGGCTGGCCTaGCACGGCCAGCGCCCTTGCATGGATTCTATCCCGCCCACTATC | + |
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Preference number: 5 (lower is better) Translates to: RLPPQRWDFFKRRLA*HGQRPCMDSIPPTI Trigger: GATAGTGGGCGGGATAGAATCCATGCAAGGGCGCTGGCCGTGGCAGGCCAGCCTGCGCTTGAAGAAGTCCCACCGCTGCGGAGGGAGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS TCA 90 bp | CACCCACATGCCCACCCTGCGTTGCTAATCTCACTCAAATCCTCCTaGAGGACTCCCCAGCCGGTCACCCAGCACCTGGGCTGGTGCTGG | + |
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Preference number: 5 (lower is better) Translates to: HPHAHPALLISLKSS*RTPQPVTQHLGWCW Trigger: CCAGCACCAGCCCAGGTGCTGGGTGACCGGCTGGGGAGTCCTTCAGGAGGATTTGAGTGAGATTAGCAACGCAGGGTGGGCATGTGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS CCA 90 bp | GGCTCTTGGAGCTCCAGAGCCAGAGAAGGGTTTCAGGGCCTGCTGTaGCTGAAACAGGGGACAGATAGCACACCCACATGCCCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GSWSSRAREGFQGLL*LKQGTDSTPTCPPC Trigger: GCAGGGTGGGCATGTGGGTGTGCTATCTGTCCCCTGTTTCAGCCACAGCAGGCCCTGAAACCCTTCTCTGGCTCTGGAGCTCCAAGAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS TCA 90 bp | CTTGGAGCTCCAGAGCCAGAGAAGGGTTTCAGGGCCTGCTGTGGCTaGAACAGGGGACAGATAGCACACCCACATGCCCACCCTGCGTTG | + |
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Preference number: 5 (lower is better) Translates to: LGAPEPEKGFRACCG*NRGQIAHPHAHPAL Trigger: CAACGCAGGGTGGGCATGTGGGTGTGCTATCTGTCCCCTGTTTCAGCCACAGCAGGCCCTGAAACCCTTCTCTGGCTCTGGAGCTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS CCA 90 bp | GGGCCTCAGGAGCCAGGGAGCCTGAAGCAGAGTGATAGACAGCAGTaGCAGGGCCAGATCACGCCTGACTGCACCATTGAGGATCATCAT | + |
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Preference number: 5 (lower is better) Translates to: GPQEPGSLKQSDRQQ*QGQITPDCTIEDHH Trigger: ATGATGATCCTCAATGGTGCAGTCAGGCGTGATCTGGCCCTGCCACTGCTGTCTATCACTCTGCTTCAGGCTCCCTGGCTCCTGAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS TCA 90 bp | TGTCTGCGCTCCCATCCTCAGCGCCAGCACAGAACACATCCTTGGTaGTCAAGTGGTGTAGGGAGAAAATCTCGAACAGCTCCTGGCACC | + |
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Preference number: 5 (lower is better) Translates to: CLRSHPQRQHRTHPW*SSGVGRKSRTAPGT Trigger: GGTGCCAGGAGCTGTTCGAGATTTTCTCCCTACACCACTTGATCACCAAGGATGTGTTCTGTGCTGGCGCTGAGGATGGGAGCGCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS CCA 90 bp | CTCCCATCCTCAGCGCCAGCACAGAACACATCCTTGGTGATCAAGTaGTGTAGGGAGAAAATCTCGAACAGCTCCTGGCACCTGCTGTTG | + |
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Preference number: 5 (lower is better) Translates to: LPSSAPAQNTSLVIK*CREKISNSSWHLLL Trigger: CAACAGCAGGTGCCAGGAGCTGTTCGAGATTTTCTCCCTACACCACTTGATCACCAAGGATGTGTTCTGTGCTGGCGCTGAGGATGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS TCA 90 bp | AGAAAATCTCGAACAGCTCCTGGCACCTGCTGTTGTTTAGGATGCTaGCCTGTACTTCTCGAAGGTGATAGGGCGGTGGCAGAGGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RKSRTAPGTCCCLGC*PVLLEGDRAVAEAS Trigger: TGAAGCCTCTGCCACCGCCCTATCACCTTCGAGAAGTACAGGTCAGCATCCTAAACAACAGCAGGTGCCAGGAGCTGTTCGAGATTTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS-3UTR CAA 90 bp | ACAATGAGTTTATTGGCAAAGAAGACAAGACAAGAGCCTGGTGAAGCAAGCTATTCCTGGCACCTGCTGTaGTTTAGGATGCTGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: TMSLLAKKTRQEPGEASYSWHLL*FRMLTC Trigger: ACAGGTCAGCATCCTAAACAACAGCAGGTGCCAGGA...ATAGCTTGCTTCACCAGGCTCTTGTCTTGTCTTCTTTGCCAATAAACTCATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS GCA 72 bp | CCGCAGCGGTGGGACTTCTTCAAGCGCAGGCTGGCCTaGCACGGCCAGCGCCCTTGCATGGATTCTATCCCG | + |
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Preference number: 6 (lower is better) Translates to: PQRWDFFKRRLA*HGQRPCMDSIP Trigger: CGGGATAGAATCCATGCAAGGGCGCTGGCCGTGGCAGGCCAGCCTGCGCTTGAAGAAGTCCCACCGCTGCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS TCA 72 bp | TGTGCTCTTGAGATCTGCCGCCTGGCTTTCTTCACGTaGCCCAGGCTTCCCCAGCATCACGCACAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CALEICRLAFFT*PRLPQHHAQQQ Trigger: CTGCTGCTGTGCGTGATGCTGGGGAAGCCTGGGTCACGTGAAGAAAGCCAGGCGGCAGATCTCAAGAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS TCA 72 bp | CCAGAGACCATCCATGTTGCAGACCAAGGGTCCTCCTaGGTCACCACTGCAGGTGTCTGCGCTCCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: PETIHVADQGSS*VTTAGVCAPIL Trigger: GAGGATGGGAGCGCAGACACCTGCAGTGGTGACTCAGGAGGACCCTTGGTCTGCAACATGGATGGTCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS TCA 72 bp | CCAGAGCCAGAGAAGGGTTTCAGGGCCTGCTGTGGCTaGAACAGGGGACAGATAGCACACCCACATGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PEPEKGFRACCG*NRGQIAHPHAH Trigger: GTGGGCATGTGGGTGTGCTATCTGTCCCCTGTTTCAGCCACAGCAGGCCCTGAAACCCTTCTCTGGCTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS TCA 72 bp | CCGGGACCGAGTGTCATTCCGGCGGCCACAGGGCATTaGGAGAAGCTTGATGTCTGTGCTCTTGAGATCTGC | + |
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Preference number: 6 (lower is better) Translates to: PGPSVIPAATGH*EKLDVCALEIC Trigger: GCAGATCTCAAGAGCACAGACATCAAGCTTCTCTCAATGCCCTGTGGCCGCCGGAATGACACTCGGTCCCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS CCA 72 bp | GTGACCGAGGAGGCCAGCCTCAGCAGGGCCAGGTCATaGGACTTCAGCTTGTCTTCGGAGTTTACGATGATG | + |
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Preference number: 6 (lower is better) Translates to: VTEEASLSRARS*DFSLSSEFTMM Trigger: CATCATCGTAAACTCCGAAGACAAGCTGAAGTCCCATGACCTGGCCCTGCTGAGGCTGGCCTCCTCGGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS CCA 72 bp | AGCTCCAGAGCCAGAGAAGGGTTTCAGGGCCTGCTGTaGCTGAAACAGGGGACAGATAGCACACCCACATGC | + |
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Preference number: 6 (lower is better) Translates to: SSRAREGFQGLL*LKQGTDSTPTC Trigger: GCATGTGGGTGTGCTATCTGTCCCCTGTTTCAGCCACAGCAGGCCCTGAAACCCTTCTCTGGCTCTGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151797.3 |
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| CDS CAA 90 bp | ACCGAGGAGGCCAGCCTCAGCAGGGCCAGGTCATGGGACTTCAGCTaGTCTTCGGAGTTTACGATGATGTCCTTTACCCTGTACCGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TEEASLSRARSWDFS*SSEFTMMSFTLYRP Trigger: TGGACGGTACAGGGTAAAGGACATCATCGTAAACTCCGAAGACAAGCTGAAGTCCCATGACCTGGCCCTGCTGAGGCTGGCCTCCTCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS CAA 72 bp | GTGTCATTCCGGCGGCCACAGGGCATTGAGAGAAGCTaGATGTCTGTGCTCTTGAGATCTGCCGCCTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VSFRRPQGIERS*MSVLLRSAAWL Trigger: AAGCCAGGCGGCAGATCTCAAGAGCACAGACATCAAGCTTCTCTCAATGCCCTGTGGCCGCCGGAATGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS CAA 90 bp | CAGGTGTCTGCGCTCCCATCCTCAGCGCCAGCACAGAACACATCCTaGGTGATCAAGTGGTGTAGGGAGAAAATCTCGAACAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: QVSALPSSAPAQNTS*VIKWCREKISNSSW Trigger: CCAGGAGCTGTTCGAGATTTTCTCCCTACACCACTTGATCACCAAGGATGTGTTCTGTGCTGGCGCTGAGGATGGGAGCGCAGACACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS TCA 72 bp | CGAACAGCTCCTGGCACCTGCTGTTGTTTAGGATGCTaGCCTGTACTTCTCGAAGGTGATAGGGCGGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RTAPGTCCCLGC*PVLLEGDRAVA Trigger: TGCCACCGCCCTATCACCTTCGAGAAGTACAGGTCAGCATCCTAAACAACAGCAGGTGCCAGGAGCTGTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS CCA 72 bp | AGAAGCTTGATGTCTGTGCTCTTGAGATCTGCCGCCTaGCTTTCTTCACGTGACCCAGGCTTCCCCAGCATC | + |
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Preference number: 6 (lower is better) Translates to: RSLMSVLLRSAA*LSSRDPGFPSI Trigger: GATGCTGGGGAAGCCTGGGTCACGTGAAGAAAGCCAGGCGGCAGATCTCAAGAGCACAGACATCAAGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS CCA 72 bp | GATGCTGACCTGTACTTCTCGAAGGTGATAGGGCGGTaGCAGAGGCTTCAAATCCTCCTGAAGGACTCCCCA | + |
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Preference number: 6 (lower is better) Translates to: DADLYFSKVIGR*QRLQILLKDSP Trigger: TGGGGAGTCCTTCAGGAGGATTTGAAGCCTCTGCCACCGCCCTATCACCTTCGAGAAGTACAGGTCAGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS CAA 72 bp | GCCAGCCTCAGCAGGGCCAGGTCATGGGACTTCAGCTaGTCTTCGGAGTTTACGATGATGTCCTTTACCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASLSRARSWDFS*SSEFTMMSFTL Trigger: CAGGGTAAAGGACATCATCGTAAACTCCGAAGACAAGCTGAAGTCCCATGACCTGGCCCTGCTGAGGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS GCA 72 bp | GATAGACAGCAGTGGCAGGGCCAGATCACGCCTGACTaGACCATTGAGGATCATCATGGTCTCGATCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DRQQWQGQITPD*TIEDHHGLDPV Trigger: AACTGGATCGAGACCATGATGATCCTCAATGGTGCAGTCAGGCGTGATCTGGCCCTGCCACTGCTGTCTATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS CAA 72 bp | CCACAGGGCATTGAGAGAAGCTTGATGTCTGTGCTCTaGAGATCTGCCGCCTGGCTTTCTTCACGTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: PQGIERSLMSVL*RSAAWLSSRDP Trigger: TGGGTCACGTGAAGAAAGCCAGGCGGCAGATCTCAAGAGCACAGACATCAAGCTTCTCTCAATGCCCTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024926.14 ENSMUST00000151797.3 |
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| CDS CAA 72 bp | GCGCTCCCATCCTCAGCGCCAGCACAGAACACATCCTaGGTGATCAAGTGGTGTAGGGAGAAAATCTCGAAC | + |
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Preference number: 6 (lower is better) Translates to: ALPSSAPAQNTS*VIKWCREKISN Trigger: GTTCGAGATTTTCTCCCTACACCACTTGATCACCAAGGATGTGTTCTGTGCTGGCGCTGAGGATGGGAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS TCA 72 bp | GGATCATCATGGTCTCGATCCAGTTGTAATAATGGCTaGCGTTGGTGTAGATGCCAGGCAGGTTGGGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: GSSWSRSSCNNG*RWCRCQAGWVA Trigger: GGCGACCCAACCTGCCTGGCATCTACACCAACGTCAGCCATTATTACAACTGGATCGAGACCATGATGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS CCA 72 bp | TCAGCGCCAGCACAGAACACATCCTTGGTGATCAAGTaGTGTAGGGAGAAAATCTCGAACAGCTCCTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: SAPAQNTSLVIK*CREKISNSSWH Trigger: GTGCCAGGAGCTGTTCGAGATTTTCTCCCTACACCACTTGATCACCAAGGATGTGTTCTGTGCTGGCGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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| CDS TCA 72 bp | TCCCATCCTCAGCGCCAGCACAGAACACATCCTTGGTaGTCAAGTGGTGTAGGGAGAAAATCTCGAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: SHPQRQHRTHPW*SSGVGRKSRTA Trigger: AGCTGTTCGAGATTTTCTCCCTACACCACTTGATCACCAAGGATGTGTTCTGTGCTGGCGCTGAGGATGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024926.14 |
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