Pregenerated sensors for PRSS40 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037529Ensembl transcript IDs: ENSMUST00000047840.9, ENSMUST00000115071.4, ENSMUST00000190790.7
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCGCCAGAGGATCAAGAGAATGCAGCATCCCAAGCCTCCTCCTaGTGGTGCTCTGCCTCCTCCTGCAGGGTGTGGCTGGTAAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: QAPEDQENAASQASS*WCSASSCRVWLVRA Trigger: AGCCCTTACCAGCCACACCCTGCAGGAGGAGGCAGAGCACCAGCAGGAGGAGGCTTGGGATGCTGCATTCTCTTGATCCTCTGGCGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 90 bp | GCGCCAGAGGATCAAGAGAATGCAGCATCCCAAGCCTCCTCCTGCTaGTGCTCTGCCTCCTCCTGCAGGGTGTGGCTGGTAAGGGCTGAG | + |
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Preference number: 1 (lower is better) Translates to: APEDQENAASQASSC*CSASSCRVWLVRAE Trigger: CTCAGCCCTTACCAGCCACACCCTGCAGGAGGAGGCAGAGCACCAGCAGGAGGAGGCTTGGGATGCTGCATTCTCTTGATCCTCTGGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 90 bp | AGGTCCCCAAACAACTGGCCCCTCCTGGGTAACAGCCAGTCAGTCTaGGTAGCTTGGACTCTCACTTGCATGCTTCACTGCCGAAATTCC | + |
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Preference number: 1 (lower is better) Translates to: RSPNNWPLLGNSQSV*VAWTLTCMLHCRNS Trigger: GGAATTTCGGCAGTGAAGCATGCAAGTGAGAGTCCAAGCTACTCAGACTGACTGGCTGTTACCCAGGAGGGGCCAGTTGTTTGGGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 90 bp | CTGGTAAGGGCTGAGGCTCCTAAGTGCGATGATAGACTCTCCTCCTaGGCTGTCACCCTTGATTACACCACAGTGTGCCAGCAAGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LVRAEAPKCDDRLSS*AVTLDYTTVCQQES Trigger: GCTTTCTTGCTGGCACACTGTGGTGTAATCAAGGGTGACAGCTCAGGAGGAGAGTCTATCATCGCACTTAGGAGCCTCAGCCCTTACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR GCA 90 bp | TTGGACTCTCACTTGCATGCTTCACTGCCGAAATTCCCTGTCACTTaGTGTTCACTGTCAGTCTCTCCGCTGATCTCTGAGCCCATGGAA | + |
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Preference number: 1 (lower is better) Translates to: LDSHLHASLPKFPVT*CSLSVSPLISEPME Trigger: TTCCATGGGCTCAGAGATCAGCGGAGAGACTGACAGTGAACAGCAAGTGACAGGGAATTTCGGCAGTGAAGCATGCAAGTGAGAGTCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 90 bp | TGTCACTTCCTTGGGTGTGGAATCTGTTGTAGTCTTTGTGAACGATaGCCTTCTGCACTGACATCGTCCTGCTGTACCTGGTGGGACTGT | + |
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Preference number: 1 (lower is better) Translates to: CHFLGCGICCSLCER*PSALTSSCCTWWDC Trigger: ACAGTCCCACCAGGTACAGCAGGACGATGTCAGTGCAGAAGGTCATCGTTCACAAAGACTACAACAGATTCCACACCCAAGGAAGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 90 bp | AGTACCTTTCTGGAGGTTTCAAAGTATGCACTGAATAGGCTTGTATaGGGTCCCCAAACAACTGGCCCCTCCTGGGTAACAGCCAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: STFLEVSKYALNRLV*GPQTTGPSWVTASQ Trigger: CTGACTGGCTGTTACCCAGGAGGGGCCAGTTGTTTGGGGACCTCATACAAGCCTATTCAGTGCATACTTTGAAACCTCCAGAAAGGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 90 bp | CTGTCACCCTTGATTACACCACAGTGTGCCAGCAAGAAAGCTGGGTaGTGGGCATCTGACTTGGTGTTGTGTCCTGTAAATAACAGATTC | + |
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Preference number: 1 (lower is better) Translates to: LSPLITPQCASKKAG*WASDLVLCPVNNRF Trigger: GAATCTGTTATTTACAGGACACAACACCAAGTCAGATGCCCACCACCCAGCTTTCTTGCTGGCACACTGTGGTGTAATCAAGGGTGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 90 bp | TCACCCTTGATTACACCACAGTGTGCCAGCAAGAAAGCTGGGTGGTaGGCATCTGACTTGGTGTTGTGTCCTGTAAATAACAGATTCACT | + |
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Preference number: 1 (lower is better) Translates to: SPLITPQCASKKAGW*ASDLVLCPVNNRFT Trigger: AGTGAATCTGTTATTTACAGGACACAACACCAAGTCAGATGCCCACCACCCAGCTTTCTTGCTGGCACACTGTGGTGTAATCAAGGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 90 bp | CACCATATCATCATATATGTAGTAGCTTCTACCGGATCCCGGAACTaGTGGTGGGAAAAATCCTTTACACTGGTCATTACTCATGATGAT | + |
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Preference number: 1 (lower is better) Translates to: HHIIIYVVASTGSRN*WWEKSFTLVITHDD Trigger: ATCATCATGAGTAATGACCAGTGTAAAGGATTTTTCCCACCACCAGTTCCGGGATCCGGTAGAAGCTACTACATATATGATGATATGGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 90 bp | CAGTCACTTGATGTGATTCACAGCATCTTCTGCGCAGATGGATTTTaGCATGTCATAGTCAGCAGCACACACCATATCATCATATATGTA | + |
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Preference number: 1 (lower is better) Translates to: QSLDVIHSIFCADGF*HVIVSSTHHIIIYV Trigger: TACATATATGATGATATGGTGTGTGCTGCTGACTATGACATGTCAAAATCCATCTGCGCAGAAGATGCTGTGAATCACATCAAGTGACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGCTTAATGGTCAGCCCTCCTTGCTTGGCTGGGCCTCTCTTCAAGGTCTCCAGGCTGGGAGGATGTaGGAGCTGTACTCCACAGAG | + |
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Preference number: 2 (lower is better) Translates to: KRLNGQPSLLGWASLQGLQAGRM*ELYSTE Trigger: CTCTGTGGAGTACAGCTCCCACATCCTCCCAGCCTG...GAGACCTTGAAGAGAGGCCCAGCCAAGCAAGGAGGGCTGACCATTAAGCCTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGCTTAATGGTCAGCCCTCCTTGCTTGGCTGGGCCTCTCTTCAAGGTCTCTCCTGCTGTACCTGGTaGGACTGTTCAGGTCGGTGT | + |
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Preference number: 2 (lower is better) Translates to: KRLNGQPSLLGWASLQGLSCCTW*DCSGRC Trigger: ACACCGACCTGAACAGTCCCACCAGGTACAGCAGGA...GAGACCTTGAAGAGAGGCCCAGCCAAGCAAGGAGGGCTGACCATTAAGCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CCA 90 bp | TGGCTGGGCCTCTCTTCAAGGTCTCCAATGAAGGCAAACCTGAATACAAGAGCCAGGTCCCCAAACAACTaGCCCCTCCTGGGTAACAGC | + |
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Preference number: 2 (lower is better) Translates to: WLGLSSRSPMKANLNTRARSPNN*PLLGNS Trigger: GCTGTTACCCAGGAGGGGCCAGTTGTTTGGGGACCT...GGCTCTTGTATTCAGGTTTGCCTTCATTGGAGACCTTGAAGAGAGGCCCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR GCA 90 bp | TGTGCACACCGTCGGCTTGATAACAGCACCTTGGTTTTTATTGTCGCCCTCGGGCTCAGTGAGGTGGCTTaGAGGACATTCTGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: CAHRRLDNSTLVFIVALGLSEVA*RTFWLS Trigger: AGACAGCCAGAATGTCCTGCAAGCCACCTCACTGAG...CCCGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTGTGCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
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| 3UTR-3UTR CCA 90 bp | AAGAGGCTTAATGGTCAGCCCTCCTTGCTTGGCTGGGCCTCTCTTCAAGGTCTCTGGGGGCTAGCTTTCTaGCAGCTGCTTTCTTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: KRLNGQPSLLGWASLQGLWGLAF*QLLSSH Trigger: ATGAGAAGAAAGCAGCTGCCAGAAAGCTAGCCCCCA...GAGACCTTGAAGAGAGGCCCAGCCAAGCAAGGAGGGCTGACCATTAAGCCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR TCA 90 bp | TCCAGACCTGAAAAGCTTCCTTTCTTCAGGCGCCAGAGGATCAAGAGAATGCAGAGGTCGTGTGAGTCCTaGACACTGTTCTGGGTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SRPEKLPFFRRQRIKRMQRSCES*TLFWVL Trigger: CAGAACCCAGAACAGTGTTCAGGACTCACACGACCT...CTGCATTCTCTTGATCCTCTGGCGCCTGAAGAAAGGAAGCTTTTCAGGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAGGCTTAATGGTCAGCCCTCCTTGCTTGGCTGGGCCTCTCTTCAAGGTCTCTGCAAAAACCCAACATaGTGTGTGGAGATTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: KRLNGQPSLLGWASLQGLCKNPT*CVEIER Trigger: CCTTTCAATCTCCACACAGCATGTTGGGTTTTTGCA...GAGACCTTGAAGAGAGGCCCAGCCAAGCAAGGAGGGCTGACCATTAAGCCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CAA 90 bp | ACACCACAGTGTGCCAGCAAGAAAGCTGGGTGGTGGGCATCTGACTaGGTGTTGTGTCCTGTAAATAACAGATTCACTGGAATATGCTGG | + |
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Preference number: 2 (lower is better) Translates to: TPQCASKKAGWWASD*VLCPVNNRFTGICW Trigger: CCAGCATATTCCAGTGAATCTGTTATTTACAGGACACAACACCAAGTCAGATGCCCACCACCCAGCTTTCTTGCTGGCACACTGTGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR GCA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACCTCAGTGAGGTGGCTTaGAGGACATTCTGGCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: YSLVFILCFAWPRARVAHLSEVA*RTFWLS Trigger: AGACAGCCAGAATGTCCTGCAAGCCACCTCACTGAG...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCCATCACAGATCCCTGAACTAAATCAACTGTTGCAGGAGGATCTGGGAGAGTTGATAACAGCACCTTaGTTTTTATTGTCGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: APSQIPELNQLLQEDLGELITAP*FLLSPS Trigger: CGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAA...CTCTCCCAGATCCTCCTGCAACAGTTGATTTAGTTCAGGGATCTGTGATGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
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| 3UTR-3UTR TCA 90 bp | GTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACCTGGATGACCTTCTGCACTaGCATCGTCCTGCTGTACCT | + |
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Preference number: 2 (lower is better) Translates to: VSPVAIYFVYSLCSFPDLDDLLH*HRPAVP Trigger: AGGTACAGCAGGACGATGTCAGTGCAGAAGGTCATC...CAGGTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CCA 90 bp | GTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACCTGTCCCGGAACTGGTGGTaGGAAAAATCCTTTACACTG | + |
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Preference number: 2 (lower is better) Translates to: VSPVAIYFVYSLCSFPDLSRNWW*EKSFTL Trigger: CAGTGTAAAGGATTTTTCCCACCACCAGTTCCGGGA...CAGGTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR GCA 90 bp | GTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACCTGCACTGTTCTGGGTTCTaGAAAAACCCAACATGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VSPVAIYFVYSLCSFPDLHCSGF*KNPTCC Trigger: ACAGCATGTTGGGTTTTTGCAGAACCCAGAACAGTG...CAGGTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CCA 90 bp | GTGGTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACACCCAACATGCTGTGTaGAGATTGAAAGGAAGACAG | + |
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Preference number: 2 (lower is better) Translates to: VVSPVAIYFVYSLCSFPDTQHAV*RLKGRQ Trigger: CTGTCTTCCTTTCAATCTCCACACAGCATGTTGGGT...GTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGACCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGGTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGAAGCAGGCCTTCTCTTTaGGGATTTTTATGTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: CGQSCSHIFCIFSVFFSRSRPSL*GFLCFP Trigger: AGGAAAACATAAAAATCCCCAAAGAGAAGGCCTGCT...TCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGACCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR GCA 72 bp | GAGGATCAAGAGAATGCAGCATCCCAAGCCTCCTCCTaGTGGTGCTCTGCCTCCTCCTGCAGGGTGTGGCTG | + |
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Preference number: 3 (lower is better) Translates to: EDQENAASQASS*WCSASSCRVWL Trigger: CAGCCACACCCTGCAGGAGGAGGCAGAGCACCAGCAGGAGGAGGCTTGGGATGCTGCATTCTCTTGATCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | TCCCTGTCACTTGCTGTTCACTGTCAGTCTCTCCGCTaGTCTCTGAGCCCATGGAAGAGGTCGTGTGAGTCC | + |
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Preference number: 3 (lower is better) Translates to: SLSLAVHCQSLR*SLSPWKRSCES Trigger: GGACTCACACGACCTCTTCCATGGGCTCAGAGATCAGCGGAGAGACTGACAGTGAACAGCAAGTGACAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | CACTTGCTGTTCACTGTCAGTCTCTCCGCTGATCTCTaGGCCCATGGAAGAGGTCGTGTGAGTCCTGAACAC | + |
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Preference number: 3 (lower is better) Translates to: HLLFTVSLSADL*AHGRGRVSPEH Trigger: GTGTTCAGGACTCACACGACCTCTTCCATGGGCTCAGAGATCAGCGGAGAGACTGACAGTGAACAGCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | AACAACTGGCCCCTCCTGGGTAACAGCCAGTCAGTCTaGGTAGCTTGGACTCTCACTTGCATGCTTCACTGC | + |
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Preference number: 3 (lower is better) Translates to: NNWPLLGNSQSV*VAWTLTCMLHC Trigger: GCAGTGAAGCATGCAAGTGAGAGTCCAAGCTACTCAGACTGACTGGCTGTTACCCAGGAGGGGCCAGTTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | GCTGAGGCTCCTAAGTGCGATGATAGACTCTCCTCCTaGGCTGTCACCCTTGATTACACCACAGTGTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: AEAPKCDDRLSS*AVTLDYTTVCQ Trigger: CTGGCACACTGTGGTGTAATCAAGGGTGACAGCTCAGGAGGAGAGTCTATCATCGCACTTAGGAGCCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | GGCTGTCTAAGGCCCCGTGGCTCCATCACAGATCCCTaGACTAAATCAACTGTTGCAGGAGGATCTGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: GCLRPRGSITDP*TKSTVAGGSGR Trigger: TCTCCCAGATCCTCCTGCAACAGTTGATTTAGTTCAGGGATCTGTGATGGAGCCACGGGGCCTTAGACAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACCTGAAAAGCTTCCTTTCTTCAGGCGCCAGAGGATCAAGAGAATGCAGAATGGTCAGCCCTCCTaGCTTGGCTGGGCCTCTCTT | + |
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Preference number: 3 (lower is better) Translates to: SRPEKLPFFRRQRIKRMQNGQPS*LGWASL Trigger: AAGAGAGGCCCAGCCAAGCAAGGAGGGCTGACCATT...CTGCATTCTCTTGATCCTCTGGCGCCTGAAGAAAGGAAGCTTTTCAGGTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | TCTCCGCTGATCTCTGAGCCCATGGAAGAGGTCGTGTaGGTCCTGAACACTGTTCTGGGTTCTGCAAAAACC | + |
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Preference number: 3 (lower is better) Translates to: SPLISEPMEEVV*VLNTVLGSAKT Trigger: GGTTTTTGCAGAACCCAGAACAGTGTTCAGGACTCACACGACCTCTTCCATGGGCTCAGAGATCAGCGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CAA 90 bp | TCCAGACCTGAAAAGCTTCCTTTCTTCAGGCGCCAGAGGATCAAGAGAATGCAGCATGCTGTGTGGAGATaGAAAGGAAGACAGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SRPEKLPFFRRQRIKRMQHAVWR*KGRQEG Trigger: CCCCTCCTGTCTTCCTTTCAATCTCCACACAGCATG...CTGCATTCTCTTGATCCTCTGGCGCCTGAAGAAAGGAAGCTTTTCAGGTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CAA 90 bp | TTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGACGGGACTCCCCTGGCTTaGAGTTGGATGATGATTTCT | + |
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Preference number: 3 (lower is better) Translates to: FVLPGLGQEWHTDGGMNDGTPLA*SWMMIS Trigger: AGAAATCATCATCCAACTCAAAGCCAGGGGAGTCCC...GTCATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
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| 3UTR-3UTR CAA 90 bp | GGCCCCGTGGCTCCATCACAGATCCCTGAACTAAATCAACTGTTGCAGGAGGATCTTGATAACAGCACCTaGGTTTTTATTGTCGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: GPVAPSQIPELNQLLQEDLDNST*VFIVAL Trigger: GAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAG...ATCCTCCTGCAACAGTTGATTTAGTTCAGGGATCTGTGATGGAGCCACGGGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
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| 3UTR CCA 72 bp | AGGGCTGTGCACACCGTCGGCTTGATAACAGCACCTTaGTTTTTATTGTCGCCCTCGGGATTTTCATTCTCA | + |
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Preference number: 3 (lower is better) Translates to: RAVHTVGLITAP*FLLSPSGFSFS Trigger: TGAGAATGAAAATCCCGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTGTGCACAGCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
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| 3UTR GCA 72 bp | AGAGGTCGTGTGAGTCCTGAACACTGTTCTGGGTTCTaGAAAAACCCAACATGCTGTGTGGAGATTGAAAGG | + |
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Preference number: 3 (lower is better) Translates to: RGRVSPEHCSGF*KNPTCCVEIER Trigger: CCTTTCAATCTCCACACAGCATGTTGGGTTTTTGCAGAACCCAGAACAGTGTTCAGGACTCACACGACCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 72 bp | TTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTaGCACACTGATGGAGGCATGAATGACAGTGCTCAG | + |
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Preference number: 3 (lower is better) Translates to: FSFFVLPGLGQE*HTDGGMNDSAQ Trigger: CTGAGCACTGTCATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
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| 3UTR CCA 72 bp | ATTACACCACAGTGTGCCAGCAAGAAAGCTGGGTGGTaGGCATCTGACTTGGTGTTGTGTCCTGTAAATAAC | + |
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Preference number: 3 (lower is better) Translates to: ITPQCASKKAGW*ASDLVLCPVNN Trigger: GTTATTTACAGGACACAACACCAAGTCAGATGCCCACCACCCAGCTTTCTTGCTGGCACACTGTGGTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 72 bp | TTGATTACACCACAGTGTGCCAGCAAGAAAGCTGGGTaGTGGGCATCTGACTTGGTGTTGTGTCCTGTAAAT | + |
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Preference number: 3 (lower is better) Translates to: LITPQCASKKAG*WASDLVLCPVN Trigger: ATTTACAGGACACAACACCAAGTCAGATGCCCACCACCCAGCTTTCTTGCTGGCACACTGTGGTGTAATCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CAA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATTTTTCATTCTTTGTTTaGCCTGGCCTAGGGCAAGAG | + |
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Preference number: 3 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNFSFFV*PGLGQE Trigger: CTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAA...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
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| 3UTR-3UTR CAA 90 bp | TGCATGCTTCACTGCCGAAATTCCCTGTCACTTGCTGTTCACTGTCAGTCTCTCGACAATGTCACTTCCTaGGGTGTGGAATCTGTTGTA | + |
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Preference number: 3 (lower is better) Translates to: CMLHCRNSLSLAVHCQSLDNVTS*GVESVV Trigger: TACAACAGATTCCACACCCAAGGAAGTGACATTGTC...GAGAGACTGACAGTGAACAGCAAGTGACAGGGAATTTCGGCAGTGAAGCATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR-3UTR CAA 90 bp | GTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACCTGGTCAGCCCTCCTTGCTaGGCTGGGCCTCTCTTCAAG | + |
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Preference number: 3 (lower is better) Translates to: VSPVAIYFVYSLCSFPDLVSPPC*AGPLFK Trigger: CTTGAAGAGAGGCCCAGCCAAGCAAGGAGGGCTGAC...CAGGTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | CTCAGAGTACCTTTCTGGAGGTTTCAAAGTATGCACTaGATAGGCTTGTATGAGGTCCCCAAACAACTGGCC | + |
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Preference number: 3 (lower is better) Translates to: LRVPFWRFQSMH*IGLYEVPKQLA Trigger: GGCCAGTTGTTTGGGGACCTCATACAAGCCTATTCAGTGCATACTTTGAAACCTCCAGAAAGGTACTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR CCA 72 bp | GATCCCGGAACTGGTGGTGGGAAAAATCCTTTACACTaGTCATTACTCATGATGATGAGCTCGGCTTCATAC | + |
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Preference number: 3 (lower is better) Translates to: DPGTGGGKNPLH*SLLMMMSSASY Trigger: GTATGAAGCCGAGCTCATCATCATGAGTAATGACCAGTGTAAAGGATTTTTCCCACCACCAGTTCCGGGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
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| 3UTR TCA 72 bp | GATGTGATTCACAGCATCTTCTGCGCAGATGGATTTTaGCATGTCATAGTCAGCAGCACACACCATATCATC | + |
|
Preference number: 3 (lower is better) Translates to: DVIHSIFCADGF*HVIVSSTHHII Trigger: GATGATATGGTGTGTGCTGCTGACTATGACATGTCAAAATCCATCTGCGCAGAAGATGCTGTGAATCACATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| 3UTR CCA 72 bp | ATCATATATGTAGTAGCTTCTACCGGATCCCGGAACTaGTGGTGGGAAAAATCCTTTACACTGGTCATTACT | + |
|
Preference number: 3 (lower is better) Translates to: IIYVVASTGSRN*WWEKSFTLVIT Trigger: AGTAATGACCAGTGTAAAGGATTTTTCCCACCACCAGTTCCGGGATCCGGTAGAAGCTACTACATATATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTCCCCTGGCTTTGAGTaGGATGATGATTTCTTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: YSLVFILCFAWPRARVAHSPGFE*DDDFLL Trigger: TAACAAGAAATCATCATCCAACTCAAAGCCAGGGGA...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
||
| 3UTR TCA 72 bp | GCTGCTTTCTTCTCATTAGTAATCAGTCACTTGATGTaGTTCACAGCATCTTCTGCGCAGATGGATTTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: AAFFSLVISHLM*FTASSAQMDFD Trigger: GTCAAAATCCATCTGCGCAGAAGATGCTGTGAATCACATCAAGTGACTGATTACTAATGAGAAGAAAGCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| 3UTR CAA 72 bp | ATCTGGGAGAGCAGCAGGGCTGTGCACACCGTCGGCTaGATAACAGCACCTTGGTTTTTATTGTCGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: IWESSRAVHTVG*ITAPWFLLSPS Trigger: CGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTGTGCACAGCCCTGCTGCTCTCCCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGGTCTGGGCATGCTGTaGCAGGAAGCTCACTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNGLGML*QEAHSE Trigger: CTCGGAGTGAGCTTCCTGTCACAGCATGCCCAGACC...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGACTCTGCGGTCTGGGCATaGTGTGACAGGAAGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FVLPGLGQEWHTDGGMNDSAVWA*CDRKLT Trigger: AGTGAGCTTCCTGTCACAGCATGCCCAGACCGCAGA...GTCATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCCAGGCTGGGAGGATGTaGGAGCTGTACTCCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFFVLPGLGQEWHTDGGQAGRM*ELYSTE Trigger: CTCTGTGGAGTACAGCTCCCACATCCTCCCAGCCTG...GCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATTGTTGCAGGAGGATCTaGGAGAGCAGCAGGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNCCRRI*ESSRAV Trigger: CACAGCCCTGCTGCTCTCCCAGATCCTCCTGCAACA...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| 3UTR CAA 72 bp | AGTGCGATGATAGACTCTCCTCCTGAGCTGTCACCCTaGATTACACCACAGTGTGCCAGCAAGAAAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAMIDSPPELSP*ITPQCASKKAG Trigger: CCCAGCTTTCTTGCTGGCACACTGTGGTGTAATCAAGGGTGACAGCTCAGGAGGAGAGTCTATCATCGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATTCCTGCTGTACCTGGTaGGACTGTTCAGGTCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNSCCTW*DCSGRC Trigger: ACACCGACCTGAACAGTCCCACCAGGTACAGCAGGA...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| CDS-3UTR TCA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGATGACCTTCTGCACTaGCATCGTCCTGCTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNDDLLH*HRPAVP Trigger: AGGTACAGCAGGACGATGTCAGTGCAGAAGGTCATC...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| 3UTR CAA 72 bp | CAGGGCTGTGCACACCGTCGGCTTGATAACAGCACCTaGGTTTTTATTGTCGCCCTCGGGATTTTCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGCAHRRLDNST*VFIVALGIFIL Trigger: GAGAATGAAAATCCCGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTGTGCACAGCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
||
| CDS-3UTR TCA 90 bp | TTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCCGGTGTAGCCTAGCATaGCATGGTAGTCACTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFFVLPGLGQEWHTDGGRCSLA*HGSHLV Trigger: AACCAAGTGACTACCATGTCATGCTAGGCTACACCG...GCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR TCA 90 bp | CTGGATGGTGAGGGGACTCCCCTGGCTTTGAGTTGGATGATGATTTCTTGTTATGATGACCTTCTGCACTaGCATCGTCCTGCTGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: LDGEGTPLALSWMMISCYDDLLH*HRPAVP Trigger: AGGTACAGCAGGACGATGTCAGTGCAGAAGGTCATC...ATAACAAGAAATCATCATCCAACTCAAAGCCAGGGGAGTCCCCTCACCATCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
||
| CDS-3UTR GCA 90 bp | TTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGACCTTGGAATTTGGTCTTaGCACATACCTCTGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FVLPGLGQEWHTDGGMNDLGIWS*HIPLTG Trigger: CCCTGTCAGAGGTATGTGGCAAGACCAAATTCCAAG...GTCATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGGCTTAATGGTCAGCCCTCCTTGCTTGGCTGGGCCTCTCTTCAAGGTCTCGTGGACTTCATGATCTaGATGGTAGTGTTATTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRLNGQPSLLGWASLQGLVDFMI*MVVLFA Trigger: TGCGAATAACACTACCATCCAGATCATGAAGTCCAC...GAGACCTTGAAGAGAGGCCCAGCCAAGCAAGGAGGGCTGACCATTAAGCCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR TCA 90 bp | TGTTCTGGGTTCTGCAAAAACCCAACATGCTGTGTGGAGATTGAAAGGAAGACAAGCAGTGGGCAGCGCTaGGTACCCAGTTTTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CSGFCKNPTCCVEIERKTSSGQR*VPSFCR Trigger: TCGACAAAAACTGGGTACTCAGCGCTGCCCACTGCT...TGTCTTCCTTTCAATCTCCACACAGCATGTTGGGTTTTTGCAGAACCCAGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR GCA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACCCACCGCTCAGCCCCTaGAATCTGACCGCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YSLVFILCFAWPRARVAHPPLSP*NLTAID Trigger: ATCTATGGCGGTCAGATTGCAGGGGCTGAGCGGTGG...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| 3UTR CAA 72 bp | TGTGCCAGCAAGAAAGCTGGGTGGTGGGCATCTGACTaGGTGTTGTGTCCTGTAAATAACAGATTCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CASKKAGWWASD*VLCPVNNRFTG Trigger: TCCAGTGAATCTGTTATTTACAGGACACAACACCAAGTCAGATGCCCACCACCCAGCTTTCTTGCTGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR TCA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACAGCAGTGGGCAGCGCTaGGTACCCAGTTTTTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: YSLVFILCFAWPRARVAHSSGQR*VPSFCR Trigger: TCGACAAAAACTGGGTACTCAGCGCTGCCCACTGCT...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGACGTGGACTTCATGATCTaGATGGTAGTGTTATTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLPGLGQEWHTDGGMNDVDFMI*MVVLFA Trigger: TGCGAATAACACTACCATCCAGATCATGAAGTCCAC...GTCATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CCA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATTCTTCCCTTGGAATTTaGTCTTGCCACATACCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNSSLGI*SCHIPL Trigger: CAGAGGTATGTGGCAAGACCAAATTCCAAGGGAAGA...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGACTTGATAACAGCACCTTaGTTTTTATTGTCGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FVLPGLGQEWHTDGGMNDLITAP*FLLSPS Trigger: CGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAA...GTCATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR TCA 90 bp | TGTGGTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGAGGTCTGGGCATGCTGTaGCAGGAAGCTCACTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CGQSCSHIFCIFSVFFSRGLGML*QEAHSE Trigger: CTCGGAGTGAGCTTCCTGTCACAGCATGCCCAGACC...TCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGACCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR GCA 90 bp | CTTCTCATTAGTAATCAGTCACTTGATGTGATTCACAGCATCTTCTGCGCAGATTCTGCGGTCTGGGCATaGTGTGACAGGAAGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LLISNQSLDVIHSIFCADSAVWA*CDRKLT Trigger: AGTGAGCTTCCTGTCACAGCATGCCCAGACCGCAGA...ATCTGCGCAGAAGATGCTGTGAATCACATCAAGTGACTGATTACTAATGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR GCA 90 bp | GTGGTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACCCACCGCTCAGCCCCTaGAATCTGACCGCCATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVSPVAIYFVYSLCSFPDPPLSP*NLTAID Trigger: ATCTATGGCGGTCAGATTGCAGGGGCTGAGCGGTGG...GTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR GCA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACACTGCTCCACAGATGTaGCTGCCATATAAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: YSLVFILCFAWPRARVAHTAPQM*LPYKRR Trigger: TCTGCGCTTATATGGCAGGCACATCTGTGGAGCAGT...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCAGCAGGCCTTCTCTTTaGGGATTTTTATGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFFVLPGLGQEWHTDGGSRPSL*GFLCFP Trigger: AGGAAAACATAAAAATCCCCAAAGAGAAGGCCTGCT...GCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| CDS-3UTR CCA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTCCCGGAACTGGTGGTaGGAAAAATCCTTTACACTG | + |
|
Preference number: 4 (lower is better) Translates to: YSLVFILCFAWPRARVAHSRNWW*EKSFTL Trigger: CAGTGTAAAGGATTTTTCCCACCACCAGTTCCGGGA...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| CDS-3UTR GCA 90 bp | GTGGTCAGTCCTGTAGCCATATATTTTGTATATTCTCTGTGTTCTTTTCCAGACACTGCTCCACAGATGTaGCTGCCATATAAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVSPVAIYFVYSLCSFPDTAPQM*LPYKRR Trigger: TCTGCGCTTATATGGCAGGCACATCTGTGGAGCAGT...GTCTGGAAAAGAACACAGAGAATATACAAAATATATGGCTACAGGACTGACCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS-3UTR CCA 90 bp | TATTCTTTAGTTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACAGCAGGCCTTCTCTTTaGGGATTTTTATGTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YSLVFILCFAWPRARVAHSRPSL*GFLCFP Trigger: AGGAAAACATAAAAATCCCCAAAGAGAAGGCCTGCT...GTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAACTAAAGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| CDS-3UTR CAA 90 bp | TGTGCACACCGTCGGCTTGATAACAGCACCTTGGTTTTTATTGTCGCCCTCGGGGACAATGTCACTTCCTaGGGTGTGGAATCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: CAHRRLDNSTLVFIVALGDNVTS*GVESVV Trigger: TACAACAGATTCCACACCCAAGGAAGTGACATTGTC...CCCGAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAGCCGACGGTGTGCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190790.7 |
||
| CDS-3UTR CAA 90 bp | TTTTCATTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCGGGACTCCCCTGGCTTaGAGTTGGATGATGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSFFVLPGLGQEWHTDGGGTPLA*SWMMIS Trigger: AGAAATCATCATCCAACTCAAAGCCAGGGGAGTCCC...GCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAATGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATGACAATGTCACTTCCTaGGGTGTGGAATCTGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNDNVTS*GVESVV Trigger: TACAACAGATTCCACACCCAAGGAAGTGACATTGTC...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047840.9 ENSMUST00000190790.7 |
||
| CDS-3UTR CAA 90 bp | TTCTTTGTTTTGCCTGGCCTAGGGCAAGAGTGGCACACTGATGGAGGCATGAATCTTGATAACAGCACCTaGGTTTTTATTGTCGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFVLPGLGQEWHTDGGMNLDNST*VFIVAL Trigger: GAGGGCGACAATAAAAACCAAGGTGCTGTTATCAAG...ATTCATGCCTCCATCAGTGTGCCACTCTTGCCCTAGGCCAGGCAAAACAAAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS CAA 90 bp | CGGCCACCGCTCAGCCCCTGCAATCTGACCGCCATAGATCTTCCCTaGGAATTTGGTCTTGCCACATACTGTAGAGACAATCCCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPLSPCNLTAIDLP*EFGLATYCRDNPSR Trigger: GCGGCTGGGATTGTCTCTACAGTATGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGCGGTCAGATTGCAGGGGCTGAGCGGTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS CCA 72 bp | GCACCCTCTGACAGGGATAGAGTGGACTTCATGATCTaGATGGTAGTGTTATTCGCAGCGTTGGTGACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: APSDRDRVDFMI*MVVLFAALVTC Trigger: ACACGTCACCAACGCTGCGAATAACACTACCATCCAGATCATGAAGTCCACTCTATCCCTGTCAGAGGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS CAA 72 bp | CAAGGGGGCCCCCAGAATCTCCTGCGCAGATGGATTTaGACATGTCATAGTCAGCAGCACACACCATATCAT | + |
|
Preference number: 6 (lower is better) Translates to: QGGPQNLLRRWI*TCHSQQHTPYH Trigger: ATGATATGGTGTGTGCTGCTGACTATGACATGTCAAAATCCATCTGCGCAGGAGATTCTGGGGGCCCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS GCA 72 bp | TCTGACCGCCATAGATCTTCCCTTGGAATTTGGTCTTaGCACATACCTCTGACAGGGATAGAGTGGACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SDRHRSSLGIWS*HIPLTGIEWTS Trigger: TGAAGTCCACTCTATCCCTGTCAGAGGTATGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGCGGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS CCA 72 bp | CATACCTCTGACAGGGATAGAGTGGACTTCATGATCTaGATGGTAGTGTTATTCGCAGCGTTGGTGACGTGT | + |
|
Preference number: 6 (lower is better) Translates to: HTSDRDRVDFMI*MVVLFAALVTC Trigger: ACACGTCACCAACGCTGCGAATAACACTACCATCCAGATCATGAAGTCCACTCTATCCCTGTCAGAGGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||
| CDS CAA 72 bp | CTCAGCCCCTGCAATCTGACCGCCATAGATCTTCCCTaGGAATTTGGTCTTGCCACATACTGTAGAGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: LSPCNLTAIDLP*EFGLATYCRDN Trigger: ATTGTCTCTACAGTATGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGCGGTCAGATTGCAGGGGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115071.4 |
||
| CDS CAA 90 bp | GTAAGCAGACAAGGGGGCCCCCAGAATCTCCTGCGCAGATGGATTTaGACATGTCATAGTCAGCAGCACACACCATATCATCATATATGT | + |
|
Preference number: 6 (lower is better) Translates to: VSRQGGPQNLLRRWI*TCHSQQHTPYHHIC Trigger: ACATATATGATGATATGGTGTGTGCTGCTGACTATGACATGTCAAAATCCATCTGCGCAGGAGATTCTGGGGGCCCCCTTGTCTGCTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047840.9 |
||