Pregenerated sensors for PRSS39 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026125Ensembl transcript IDs: ENSMUST00000027299.10, ENSMUST00000191604.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTaGGCCCACAGATGGAAGCGTGCAAAGTGGCTCTTGGTGAATAGA | + |
|
Preference number: 1 (lower is better) Translates to: LFGQAWSWCGLRWDR*AHRWKRAKWLLVNR Trigger: TCTATTCACCAAGAGCCACTTTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| 3UTR TCA 72 bp | CAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTaGGCCCACAGATGGAAGCGTGCAAAGTGGCTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QAWSWCGLRWDR*AHRWKRAKWLL Trigger: CAAGAGCCACTTTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGGGGAAACCTTCGTGGTaGCGTCAGGGACACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLELVWPQMGQVSPQMEAGKPSW*RQGHRL Trigger: CAGCCTGTGTCCCTGACGGCACCACGAAGGTTTCCC...CGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGACCTTTGGAAGCAGTaGGCAGCGCTGAGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPGAGVASDGTGEPTDGSDLWKQ*AALSSQ Trigger: CTGGCTACTCAGCGCTGCCCACTGCTTCCAAAGGTC...GCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCTCTGCCGGCTGTAGTTaGAGGGGTTGCTCAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGAGVASDGTGEPTDGSSAGCS*RGCSAG Trigger: ACCAGCTGAGCAACCCCTCCAACTACAGCCGGCAGA...GCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR TCA 90 bp | GCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAAGTCCAGCCTCTCAGGGATaGCGCCATTTCCTCAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGVASDGTGEPTDGSVQSPASQG*RHFLKG Trigger: CCCCTTGAGGAAATGGCGTCATCCCTGAGAGGCTGG...ACTTTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CCA 90 bp | TCACGGTCATCTGCCGGCTGTAGTTGGAGGGGTTGCTCAGCTGGTTGTACCCTAGACCTTTGGAAGCAGTaGGCAGCGCTGAGTAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSSAGCSWRGCSAGCTLDLWKQ*AALSSQ Trigger: CTGGCTACTCAGCGCTGCCCACTGCTTCCAAAGGTC...TAGGGTACAACCAGCTGAGCAACCCCTCCAACTACAGCCGGCAGATGACCGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191604.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAGGTAGTCAGATGGTGTaGGAGACCTTTGGAAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAGVASDGTGEPTDGSVQGSQMV*ETFGSS Trigger: ACTGCTTCCAAAGGTCTCTCACACCATCTGACTACC...TTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR TCA 90 bp | CTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAGTCCTCATGCAAGATaGCCTTGTTCACGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LELVWPQMGQVSPQMEACSPHAR*PCSRSS Trigger: AGATGACCGTGAACAAGGTCATCTTGCATGAGGACT...GCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCGTGATGCTGACTTCTaGTGTCTGGAAAAAGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGAGVASDGTGEPTDGSVRDADF*CLEKGR Trigger: ACGACCTTTTTCCAGACACCAGAAGTCAGCATCACG...CACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR GCA 90 bp | GCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAAGTTGTAGTTGGAGGGGTTaGTCAGCTGGTTGTACCCTA | + |
|
Preference number: 4 (lower is better) Translates to: AGVASDGTGEPTDGSVQSCSWRG*SAGCTL Trigger: TAGGGTACAACCAGCTGAGCAACCCCTCCAACTACA...ACTTTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGTTGCCTTTTTCTGCTTaGTCCAGTCAGAAAAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGAGVASDGTGEPTDGSVLPFSA*SSQKSR Trigger: CCTACTTTTCTGACTGGATCAAGCAGAAAAAGGCAA...CACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR GCA 90 bp | TTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGCAGCAGAGGGAAAGGTaGTTGCAGGAACTTGTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LVVLFGQAWSWCGLRWDRQQRER*LQELVR Trigger: GCGGACAAGTTCCTGCAAGCACCTTTCCCTCTGCTG...CCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR TCA 90 bp | CCTTGTTCACGGTCATCTGCCGGCTGTAGTTGGAGGGGTTGCTCAGCTGGTTGTGAGCATGTAAGAGGCTaGAACAGAGTAAGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCSRSSAGCSWRGCSAGCEHVRG*NRVRKQ Trigger: CTGCTTTCTTACTCTGTTTCAGCCTCTTACATGCTC...ACAACCAGCTGAGCAACCCCTCCAACTACAGCCGGCAGATGACCGTGAACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191604.2 |
||
| CDS-3UTR TCA 90 bp | TTTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGAGTAGGAGACCTTGGTaGAGATGTTGGGGCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSCFIRSGLELVWPQMGQSRRPW*RCWGCG Trigger: TCCACAGCCCCAACATCTTCACCAAGGTCTCCTACT...CTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR GCA 90 bp | TTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGCTGGGAAAATGTGGGTaGTGTAGATCACAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVLFGQAWSWCGLRWDRLGKCG*CRSQGG Trigger: ACCACCCTGTGATCTACAGCACCCACATTTTCCCAG...CCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAGTGTTTGCCTTTTTCTaGTTGATCCAGTCAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGVASDGTGEPTDGSVQVFAFF*LIQSEK Trigger: CTTTTCTGACTGGATCAAGCAGAAAAAGGCAAACAC...TTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACTTTGAGGGTAATGCCTaGACTGTAATTCCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLVVLFGQAWSWCGLRWDFEGNA*TVIPPA Trigger: GGCTGGGGGAATTACAGTGCAGGCATTACCCTCAAA...GTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR TCA 90 bp | TTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGGAGCATGTAAGAGGCTaGAACAGAGTAAGAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVLFGQAWSWCGLRWDREHVRG*NRVRKQ Trigger: CTGCTTTCTTACTCTGTTTCAGCCTCTTACATGCTC...CCTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR TCA 90 bp | TCTTTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGATTTCTGATTGGTaGGATCTCCGGCACATAACA | + |
|
Preference number: 4 (lower is better) Translates to: SLVVLFGQAWSWCGLRWDRISDW*DLRHIT Trigger: TGTTATGTGCCGGAGATCTCACCAATCAGAAATCCT...GTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAGGGTTGCTCAGCTGGTaGTACCCTAGCAGGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGVASDGTGEPTDGSVQGLLSW*YPSRIR Trigger: CCGGATCCTGCTAGGGTACAACCAGCTGAGCAACCC...TTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAGCCACCGCTCAGCCTTaGCAATCTGACCGCCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGVASDGTGEPTDGSVQATAQP*QSDRHR Trigger: TCTATGGCGGTCAGATTGCAAAGGCTGAGCGGTGGC...TTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAACCTGAGCCAAATCGATaGCAGGAGGAGGGCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GAGVASDGTGEPTDGSVQPEPNR*QEEGLR Trigger: TCTCAGGCCCTCCTCCTGCAATCGATTTGGCTCAGG...TTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | CCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGACCTTGGTGAAGATGTaGGGGCTGTGGATCGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGAGVASDGTGEPTDGSVTLVKM*GLWIGS Trigger: TGAACCGATCCACAGCCCCAACATCTTCACCAAGGT...CACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | GATGACCTTGTTCACGGTCATCTGCCGGCTGTAGTTGGAGGGGTTGCTCAGCTGGCCACCGCTCAGCCTTaGCAATCTGACCGCCATAGA | + |
|
Preference number: 5 (lower is better) Translates to: DDLVHGHLPAVVGGVAQLATAQP*QSDRHR Trigger: TCTATGGCGGTCAGATTGCAAAGGCTGAGCGGTGGC...CAGCTGAGCAACCCCTCCAACTACAGCCGGCAGATGACCGTGAACAAGGTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191604.2 |
||
| CDS-3UTR CAA 90 bp | CTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCCTGAGTAGCCAGGTTTaGTCGATGAGAACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LELVWPQMGQVSPQMEACLSSQV*SMRTAP Trigger: TGGAGCAGTTCTCATCGACAAAACCTGGCTACTCAG...GCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS TCA 90 bp | CTCCGCGTCCAGCAGAGGGAAAGGTGCTTGCAGGAACTTGTCCGCTaGGAGCATTCCCCAGCCGCTTATCCAGCAGAGATTATTAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LRVQQRERCLQELVR*EHSPAAYPAEIIRG Trigger: TCCCCTAATAATCTCTGCTGGATAAGCGGCTGGGGAATGCTCTCAGCGGACAAGTTCCTGCAAGCACCTTTCCCTCTGCTGGACGCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS GCA 90 bp | TCATCAATAAGAGAGACCTCCGCGTCCAGCAGAGGGAAAGGTGCTTaGAGGAACTTGTCCGCTGAGAGCATTCCCCAGCCGCTTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSIRETSASSRGKGA*RNLSAESIPQPLIQ Trigger: CTGGATAAGCGGCTGGGGAATGCTCTCAGCGGACAAGTTCCTGCAAGCACCTTTCCCTCTGCTGGACGCGGAGGTCTCTCTTATTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | GCTGGTGTGGCCTCAGATGGGACAGGTGAGCCCACAGATGGAAGCGTGCAAAGTGCCATAGATCTTCCCTaGGAATTTGGTCTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AGVASDGTGEPTDGSVQSAIDLP*EFGLAT Trigger: TGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGC...ACTTTGCACGCTTCCATCTGTGGGCTCACCTGTCCCATCTGAGGCCACACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS-3UTR CAA 90 bp | GATGACCTTGTTCACGGTCATCTGCCGGCTGTAGTTGGAGGGGTTGCTCAGCTGGCCATAGATCTTCCCTaGGAATTTGGTCTTGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DDLVHGHLPAVVGGVAQLAIDLP*EFGLAT Trigger: TGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGC...CAGCTGAGCAACCCCTCCAACTACAGCCGGCAGATGACCGTGAACAAGGTCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191604.2 |
||
| CDS-3UTR CAA 90 bp | TTTAGTTGTTTTATTCGGTCAGGCCTGGAGCTGGTGTGGCCTCAGATGGGACAGGTGGAGATCCTGGGTTaGAGGGTAATGCCTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: FSCFIRSGLELVWPQMGQVEILG*RVMPAL Trigger: CAGTGCAGGCATTACCCTCAAACCCAGGATCTCCAC...CTGTCCCATCTGAGGCCACACCAGCTCCAGGCCTGACCGAATAAAACAACTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS CAA 72 bp | TCCGCGTCCAGCAGAGGGAAAGGTGCTTGCAGGAACTaGTCCGCTGAGAGCATTCCCCAGCCGCTTATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SASSRGKGACRN*SAESIPQPLIQ Trigger: CTGGATAAGCGGCTGGGGAATGCTCTCAGCGGACAAGTTCCTGCAAGCACCTTTCCCTCTGCTGGACGCGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS GCA 72 bp | TGGTGCCGTCAGGGACACAGGCTGGGAAAATGTGGGTaGTGTAGATCACAGGGTGGTGCAGCTGGATCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: WCRQGHRLGKCG*CRSQGGAAGSG Trigger: TCCTGATCCAGCTGCACCACCCTGTGATCTACAGCACCCACATTTTCCCAGCCTGTGTCCCTGACGGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS CAA 90 bp | AGAGAGACCTCCGCGTCCAGCAGAGGGAAAGGTGCTTGCAGGAACTaGTCCGCTGAGAGCATTCCCCAGCCGCTTATCCAGCAGAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: RETSASSRGKGACRN*SAESIPQPLIQQRL Trigger: TAATCTCTGCTGGATAAGCGGCTGGGGAATGCTCTCAGCGGACAAGTTCCTGCAAGCACCTTTCCCTCTGCTGGACGCGGAGGTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS TCA 72 bp | CAGCAGAGGGAAAGGTGCTTGCAGGAACTTGTCCGCTaGGAGCATTCCCCAGCCGCTTATCCAGCAGAGATT | + |
|
Preference number: 6 (lower is better) Translates to: QQRERCLQELVR*EHSPAAYPAEI Trigger: AATCTCTGCTGGATAAGCGGCTGGGGAATGCTCTCAGCGGACAAGTTCCTGCAAGCACCTTTCCCTCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS TCA 72 bp | AGAATCCTGAGCCAAATCGATTGCAGGAGGAGGGCCTaGGAAGACAGCAAGGTTGTGGAGATCCTGGGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RILSQIDCRRRA*EDSKVVEILGL Trigger: CAAACCCAGGATCTCCACAACCTTGCTGTCTTCTCAGGCCCTCCTCCTGCAATCGATTTGGCTCAGGATTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027299.10 |
||
| CDS GCA 72 bp | TCTGACCGCCATAGATCTTCCCTTGGAATTTGGTCTTaGCACATAACTCCTTCTGGACCCGGCCTCTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: SDRHRSSLGIWS*HITPSGPGLLV Trigger: AACCAAGAGGCCGGGTCCAGAAGGAGTTATGTGGCAAGACCAAATTCCAAGGGAAGATCTATGGCGGTCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027299.10 ENSMUST00000191604.2 |
||
| CDS CCA 72 bp | TTCCCTTGGAATTTGGTCTTGCCACATAACTCCTTCTaGACCCGGCCTCTTGGTTTGAGCGAGGTGTTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: FPWNLVLPHNSF*TRPLGLSEVFD Trigger: ATCGAACACCTCGCTCAAACCAAGAGGCCGGGTCCAGAAGGAGTTATGTGGCAAGACCAAATTCCAAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027299.10 ENSMUST00000191604.2 |
||