Pregenerated sensors for PRSS38 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049291Ensembl transcript IDs: ENSMUST00000061481.7
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCCTCTCCACATCTCATGCTCAGCCTCTTACAGACTTAGAGTCTaGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: APLHISCSASYRLRV*DKCPDFMEQDAWKQ Trigger: CTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGTAAGAGGCTGAGCATGAGATGTGGAGAGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| 3UTR TCA 90 bp | ACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTaGGAGCTAGAGAGGATAGAAACAGGGCATGTGGCAGCTCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: TSVLTSWNKMRGSRI*ELERIETGHVAAQV Trigger: CACTTGAGCTGCCACATGCCCTGTTTCTATCCTCTCTAGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| 3UTR CCA 90 bp | CTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTaGAAGCAGGATTTGAGAGCTAGAGAGGATAGAAACAGGGCATGT | + |
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Preference number: 1 (lower is better) Translates to: LRVWDKCPDFMEQDA*KQDLRAREDRNRAC Trigger: ACATGCCCTGTTTCTATCCTCTCTAGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCCCTCTCCACATCTCATGCTCAGCCTCTTACAGACTTAGAGTCTGGGACCGTGGAAGCAGGATTTaGGAGCTAGAGAGGATAGAA | + |
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Preference number: 2 (lower is better) Translates to: PAPLHISCSASYRLRVWDRGSRI*ELERIE Trigger: TTCTATCCTCTCTAGCTCTCAAATCCTGCTTCCACG...GTCCCAGACTCTAAGTCTGTAAGAGGCTGAGCATGAGATGTGGAGAGGGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| 3UTR-3UTR CCA 90 bp | TCTTTAATAACTTTTGACTGTCACATGAGTAGAATCCAAGCTCTTGGTTCACCCAGTGTCCTGACTTCATaGAACAAGATGCGTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SLITFDCHMSRIQALGSPSVLTS*NKMRGS Trigger: GCTTCCACGCATCTTGTTCCATGAAGTCAGGACACT...GGGTGAACCAAGAGCTTGGATTCTACTCATGTGACAGTCAAAAGTTATTAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| 3UTR TCA 72 bp | CTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTaGGAGCTAGAGAGGATAGAAACAGGGCATGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LTSWNKMRGSRI*ELERIETGHVA Trigger: TGCCACATGCCCTGTTTCTATCCTCTCTAGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | TACAGACTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGCCTTGCAGGACTGGCTaGCCACAGGCCACGTCACCG | + |
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Preference number: 4 (lower is better) Translates to: YRLRVWDKCPDFMEQDAWPCRTG*PQATSP Trigger: CGGTGACGTGGCCTGTGGCCAGCCAGTCCTGCAAGG...CCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | TGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGAGCTAGAGAGCTTGCCTTGCAGGACTaGCTGGCCACAGGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: CPDFMEQDAWKQDLRARELALQD*LATGHV Trigger: GACGTGGCCTGTGGCCAGCCAGTCCTGCAAGGCAAG...CTCTCTAGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR GCA 90 bp | TGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGACCCAAGAGCTTGCCTTaGAGGACTGGCTGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: WDKCPDFMEQDAWKQDLRPKSLP*RTGWPQ Trigger: CTGTGGCCAGCCAGTCCTGCAAGGCAAGCTCTTGGG...TCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR GCA 90 bp | GACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGAGCTGTCAAAGCAGTGTGCTaGCGACAGCACCCAGTAGGC | + |
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Preference number: 4 (lower is better) Translates to: DKCPDFMEQDAWKQDLRAVKAVC*RQHPVG Trigger: GCCTACTGGGTGCTGTCGGCAGCACACTGCTTTGAC...AGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | GACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGAGCTTCCCCTCCAATAGGGTaGTACATCTGGAAGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DKCPDFMEQDAWKQDLRASPPIG*YIWKVG Trigger: CCCCACCTTCCAGATGTACCACCCTATTGGAGGGGA...AGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | TGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGACACGTCACCGCTCAGTaGATTTGCCTGGCTTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: WDKCPDFMEQDAWKQDLRHVTAQ*ICLAFW Trigger: CCAAAAAGCCAGGCAAATTCACTGAGCGGTGACGTG...TCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | TGGAAGCAGGATTTGAGAGCTAGAGAGGATAGAAACAGGGCATGTGGCAGCTCAAGGGACGGGAGTATCTaGGGAGGATTGGGTATGATT | + |
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Preference number: 4 (lower is better) Translates to: WKQDLRAREDRNRACGSSRDGSI*GGLGMI Trigger: AATCATACCCAATCCTCCTCAGATACTCCCGTCCCT...TGAGCTGCCACATGCCCTGTTTCTATCCTCTCTAGCTCTCAAATCCTGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | ACAGACTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAGGTGTTTTTCGGGGATaGAGAGAGGGACGGGAGTAT | + |
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Preference number: 4 (lower is better) Translates to: TDLESGTSVLTSWNKMRGGVFRG*REGREY Trigger: ATACTCCCGTCCCTCTCTTCATCCCCGAAAAACACC...TCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR GCA 90 bp | CCTGCCCCTCTCCACATCTCATGCTCAGCCTCTTACAGACTTAGAGTCTGGGACCATTGTCTTGATGTCTaGAGCACACAACATTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: PAPLHISCSASYRLRVWDHCLDV*STQHFW Trigger: CCAGAAATGTTGTGTGCTGCAGACATCAAGACAATG...GTCCCAGACTCTAAGTCTGTAAGAGGCTGAGCATGAGATGTGGAGAGGGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| 3UTR CAA 72 bp | CCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTaGAGAGCTAGAGAGGATAGAAACAGGGCATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: PDFMEQDAWKQD*RAREDRNRACG Trigger: GCCACATGCCCTGTTTCTATCCTCTCTAGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | AGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATGGAAGGTGGGGTGAATaGTCACCTGGTAAATCTCAA | + |
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Preference number: 4 (lower is better) Translates to: RVWDKCPDFMEQDAWKQDGRWGE*SPGKSQ Trigger: TTGAGATTTACCAGGTGATCATTCACCCCACCTTCC...ATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | TGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGAGCTAGAGAGCTCAGTGAATTTGCCTaGCTTTTTGGGTGTCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: CPDFMEQDAWKQDLRARELSEFA*LFGCRR Trigger: TCGCCGACACCCAAAAAGCCAGGCAAATTCACTGAG...CTCTCTAGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR GCA 90 bp | GACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGAGCTAACCAGGTCTGGTTCTaGTTACATACCAGTGGACTG | + |
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Preference number: 4 (lower is better) Translates to: DKCPDFMEQDAWKQDLRANQVWF*LHTSGL Trigger: CAGTCCACTGGTATGTAAGCAGAACCAGACCTGGTT...AGCTCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | AGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATCATTCTTCATTGTCTTaGTGTCTGCAGCACACAACA | + |
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Preference number: 4 (lower is better) Translates to: RVWDKCPDFMEQDAWKQDHSSLS*CLQHTT Trigger: TGTTGTGTGCTGCAGACATCAAGACAATGAAGAATG...ATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | TCTTTAATAACTTTTGACTGTCACATGAGTAGAATCCAAGCTCTTGGTTCACCCCAGAGTAATGCAAGCTaGCCTGCCACGGCCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLITFDCHMSRIQALGSPQSNAS*PATAIS Trigger: GGAAATGGCCGTGGCAGGTCAGCTTGCATTACTCTG...GGGTGAACCAAGAGCTTGGATTCTACTCATGTGACAGTCAAAAGTTATTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | TGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAAGCAGGATTTGAGAAGGTGGCAAGCAAATTaGGAGCACAAAGTCAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: WDKCPDFMEQDAWKQDLRRWQAN*EHKVRK Trigger: TTTTCTGACTTTGTGCTCCCAATTTGCTTGCCACCT...TCTCAAATCCTGCTTCCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR TCA 90 bp | CTTACAGACTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGAGGAGGATTGGGTATaGTTTGTAAGTGATAACGGA | + |
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Preference number: 4 (lower is better) Translates to: LTDLESGTSVLTSWNKMREEDWV*FVSDNG Trigger: TCCGTTATCACTTACAAATCATACCCAATCCTCCTC...ACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | TACAGACTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTGGAGTCAGAAAATACGATaGCGCTCTTCAATTGCACTA | + |
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Preference number: 4 (lower is better) Translates to: YRLRVWDKCPDFMEQDAWSQKIR*RSSIAL Trigger: TAGTGCAATTGAAGAGCGCCATCGTATTTTCTGACT...CCACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CCA 90 bp | CAGCCTCTTACAGACTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGAAAAATAGGAGACATTaGCAAACACTCCTGGGTACA | + |
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Preference number: 4 (lower is better) Translates to: QPLTDLESGTSVLTSWNKKNRRH*QTLLGT Trigger: TGTACCCAGGAGTGTTTGCCAATGTCTCCTATTTTT...CTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGTAAGAGGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CCA 90 bp | AGGACTGGCTGGCCACAGGCCACGTCACCGCTCAGTGAATTTGCCTaGCTTTTTGGGTGTCGGCGACTAACTGATGTGACCCAGGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: RTGWPQATSPLSEFA*LFGCRRLTDVTQVG Trigger: CCCAACCTGGGTCACATCAGTTAGTCGCCGACACCCAAAAAGCCAGGCAAATTCACTGAGCGGTGACGTGGCCTGTGGCCAGCCAGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CAA 90 bp | CTTACAGACTTAGAGTCTGGGACAAGTGTCCTGACTTCATGGAACAAGATGCGTTCCTGGGTACAGGGGTaGGGCACAACCACGCCCCCA | + |
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Preference number: 5 (lower is better) Translates to: LTDLESGTSVLTSWNKMRSWVQG*GTTTPP Trigger: TGGGGGCGTGGTTGTGCCCAACCCCTGTACCCAGGA...ACGCATCTTGTTCCATGAAGTCAGGACACTTGTCCCAGACTCTAAGTCTGTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 90 bp | ATATATATCATAGGTTTCGAGTTTCTTCCCCCTGTCAAAGCAGTGTaGTGCCGACAGCACCCAGTAGGCACTGAGGATGGAGCCACCACA | + |
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Preference number: 5 (lower is better) Translates to: IYIIGFEFLPPVKAV*CRQHPVGTEDGATT Trigger: TGTGGTGGCTCCATCCTCAGTGCCTACTGGGTGCTGTCGGCAGCACACTGCTTTGACAGGGGGAAGAAACTCGAAACCTATGATATATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CAA 90 bp | CCTGCCCCTCTCCACATCTCATGCTCAGCCTCTTACAGACTTAGAGTCTGGGACTTGGCCTTCTCAAGGTaGGTGATGCCCACATATATA | + |
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Preference number: 5 (lower is better) Translates to: PAPLHISCSASYRLRVWDLAFSR*VMPTYI Trigger: TATATATGTGGGCATCACCAACCTTGAGAAGGCCAA...GTCCCAGACTCTAAGTCTGTAAGAGGCTGAGCATGAGATGTGGAGAGGGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS TCA 90 bp | CCAGTGGACTGCCAGAGTCACCCTCACACACATTCTTCATTGTCTTaGTGTCTGCAGCACACAACATTTCTGGCAGGAGGTAGGAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: PVDCQSHPHTHSSLS*CLQHTTFLAGGRSL Trigger: TAAGCTCCTACCTCCTGCCAGAAATGTTGTGTGCTGCAGACATCAAGACAATGAAGAATGTGTGTGAGGGTGACTCTGGCAGTCCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 90 bp | CAAATTGGGAGCACAAAGTCAGAAAATACGATGGCGCTCTTCAATTaGACTAGCGCCACGTCCCCTCCAATAGGGTGGTACATCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: QIGSTKSENTMALFN*TSATSPPIGWYIWK Trigger: CTTCCAGATGTACCACCCTATTGGAGGGGACGTGGCGCTAGTGCAATTGAAGAGCGCCATCGTATTTTCTGACTTTGTGCTCCCAATTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CCA 90 bp | GCAAGACAGATTGATGAGGTACAAGTCGGAAGGTGGCAAGCAAATTaGGAGCACAAAGTCAGAAAATACGATGGCGCTCTTCAATTGCAC | + |
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Preference number: 5 (lower is better) Translates to: ARQIDEVQVGRWQAN*EHKVRKYDGALQLH Trigger: GTGCAATTGAAGAGCGCCATCGTATTTTCTGACTTTGTGCTCCCAATTTGCTTGCCACCTTCCGACTTGTACCTCATCAATCTGTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CCA 90 bp | CACTATTCCAATCTGCAACCAGGTCTGGTTCTGCTTACATACCAGTaGACTGCCAGAGTCACCCTCACACACATTCTTCATTGTCTTGAT | + |
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Preference number: 5 (lower is better) Translates to: HYSNLQPGLVLLTYQ*TARVTLTHILHCLD Trigger: ATCAAGACAATGAAGAATGTGTGTGAGGGTGACTCTGGCAGTCCACTGGTATGTAAGCAGAACCAGACCTGGTTGCAGATTGGAATAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS-3UTR CAA 90 bp | TCTTTAATAACTTTTGACTGTCACATGAGTAGAATCCAAGCTCTTGGTTCACCCAAGGTGGCAAGCAAATaGGGAGCACAAAGTCAGAAA | + |
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Preference number: 5 (lower is better) Translates to: SLITFDCHMSRIQALGSPKVASK*GAQSQK Trigger: TTTCTGACTTTGTGCTCCCAATTTGCTTGCCACCTT...GGGTGAACCAAGAGCTTGGATTCTACTCATGTGACAGTCAAAAGTTATTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CAA 72 bp | CCGATCACGAGCAAACTCTCCACCCAAGAGCTTGCCTaGCAGGACTGGCTGGCCACAGGCCACGTCACCGCT | + |
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Preference number: 6 (lower is better) Translates to: PITSKLSTQELA*QDWLATGHVTA Trigger: AGCGGTGACGTGGCCTGTGGCCAGCCAGTCCTGCAAGGCAAGCTCTTGGGTGGAGAGTTTGCTCGTGATCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS TCA 72 bp | CAGGACTGGCTGGCCACAGGCCACGTCACCGCTCAGTaGATTTGCCTGGCTTTTTGGGTGTCGGCGACTAAC | + |
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Preference number: 6 (lower is better) Translates to: QDWLATGHVTAQ*ICLAFWVSATN Trigger: GTTAGTCGCCGACACCCAAAAAGCCAGGCAAATTCACTGAGCGGTGACGTGGCCTGTGGCCAGCCAGTCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CCA 72 bp | AACTCTCCACCCAAGAGCTTGCCTTGCAGGACTGGCTaGCCACAGGCCACGTCACCGCTCAGTGAATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: NSPPKSLPCRTG*PQATSPLSEFA Trigger: GGCAAATTCACTGAGCGGTGACGTGGCCTGTGGCCAGCCAGTCCTGCAAGGCAAGCTCTTGGGTGGAGAGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 72 bp | ATTTCCGATCACGAGCAAACTCTCCACCCAAGAGCTTaGCTTGCAGGACTGGCTGGCCACAGGCCACGTCAC | + |
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Preference number: 6 (lower is better) Translates to: ISDHEQTLHPRA*LAGLAGHRPRH Trigger: GTGACGTGGCCTGTGGCCAGCCAGTCCTGCAAGGCAAGCTCTTGGGTGGAGAGTTTGCTCGTGATCGGAAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 72 bp | GGTTTCGAGTTTCTTCCCCCTGTCAAAGCAGTGTGCTaGCGACAGCACCCAGTAGGCACTGAGGATGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GFEFLPPVKAVC*RQHPVGTEDGA Trigger: GGCTCCATCCTCAGTGCCTACTGGGTGCTGTCGGCAGCACACTGCTTTGACAGGGGGAAGAAACTCGAAACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CAA 72 bp | CATTTCCGATCACGAGCAAACTCTCCACCCAAGAGCTaGCCTTGCAGGACTGGCTGGCCACAGGCCACGTCA | + |
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Preference number: 6 (lower is better) Translates to: HFRSRANSPPKS*PCRTGWPQATS Trigger: TGACGTGGCCTGTGGCCAGCCAGTCCTGCAAGGCAAGCTCTTGGGTGGAGAGTTTGCTCGTGATCGGAAATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CCA 72 bp | TGGCCACAGGCCACGTCACCGCTCAGTGAATTTGCCTaGCTTTTTGGGTGTCGGCGACTAACTGATGTGACC | + |
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Preference number: 6 (lower is better) Translates to: WPQATSPLSEFA*LFGCRRLTDVT Trigger: GGTCACATCAGTTAGTCGCCGACACCCAAAAAGCCAGGCAAATTCACTGAGCGGTGACGTGGCCTGTGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 72 bp | ATAGGTTTCGAGTTTCTTCCCCCTGTCAAAGCAGTGTaGTGCCGACAGCACCCAGTAGGCACTGAGGATGGA | + |
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Preference number: 6 (lower is better) Translates to: IGFEFLPPVKAV*CRQHPVGTEDG Trigger: TCCATCCTCAGTGCCTACTGGGTGCTGTCGGCAGCACACTGCTTTGACAGGGGGAAGAAACTCGAAACCTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 72 bp | GCAACCAGGTCTGGTTCTGCTTACATACCAGTGGACTaGCAGAGTCACCCTCACACACATTCTTCATTGTCT | + |
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Preference number: 6 (lower is better) Translates to: ATRSGSAYIPVD*QSHPHTHSSLS Trigger: AGACAATGAAGAATGTGTGTGAGGGTGACTCTGGCAGTCCACTGGTATGTAAGCAGAACCAGACCTGGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CAA 72 bp | CTGCCAGAGTCACCCTCACACACATTCTTCATTGTCTaGATGTCTGCAGCACACAACATTTCTGGCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LPESPSHTFFIV*MSAAHNISGRR Trigger: CCTCCTGCCAGAAATGTTGTGTGCTGCAGACATCAAGACAATGAAGAATGTGTGTGAGGGTGACTCTGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS TCA 72 bp | TGCCAGAGTCACCCTCACACACATTCTTCATTGTCTTaGTGTCTGCAGCACACAACATTTCTGGCAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: CQSHPHTHSSLS*CLQHTTFLAGG Trigger: ACCTCCTGCCAGAAATGTTGTGTGCTGCAGACATCAAGACAATGAAGAATGTGTGTGAGGGTGACTCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS GCA 72 bp | GTCACCCTCACACACATTCTTCATTGTCTTGATGTCTaGAGCACACAACATTTCTGGCAGGAGGTAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: VTLTHILHCLDV*STQHFWQEVGA Trigger: AGCTCCTACCTCCTGCCAGAAATGTTGTGTGCTGCAGACATCAAGACAATGAAGAATGTGTGTGAGGGTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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| CDS CCA 72 bp | ATTGATGAGGTACAAGTCGGAAGGTGGCAAGCAAATTaGGAGCACAAAGTCAGAAAATACGATGGCGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: IDEVQVGRWQAN*EHKVRKYDGAL Trigger: AAGAGCGCCATCGTATTTTCTGACTTTGTGCTCCCAATTTGCTTGCCACCTTCCGACTTGTACCTCATCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061481.7 |
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