Pregenerated sensors for PRSS37 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029909Ensembl transcript IDs: ENSMUST00000031967.6
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTCCGCAGAGGCAATGAGATaGGGAGGGAAAAGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FQTFCLESLFEFRDHVSSAEAMR*GGKSRA Trigger: TGCCCTGCTTTTCCCTCCGCATCTCATTGCCTCTGC...GGAGCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| 3UTR-3UTR TCA 90 bp | GCTGCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTACAATGGCAGAGGCAATaGGATGCGGAGGGAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: AAFQTFCLESLFEFRDHVQWQRQ*DAEGKA Trigger: TGCTTTTCCCTCCGCATCTCATTGCCTCTGCCATTG...TACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR GCA 90 bp | TTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTCCGGAGCTTCCAGGTTCTaGCGTAAGTCAGGGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FQTFCLESLFEFRDHVSSGASRF*RKSGCL Trigger: CAGGCACCCTGACTTACGGCAGAACCTGGAAGCTCC...GGAGCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CCA 90 bp | GCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTGTACAGACAGTGCCTaGCCGGACATTAGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AFQTFCLESLFEFRDHVSCTDSA*PDISGG Trigger: GCCACCACTAATGTCCGGCCAGGCACTGTCTGTACA...GCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CCA 90 bp | GCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCCATGAGGTCATCCTGTaGGGCTGTGTGGCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AFQTFCLESLFEFRDHVSHEVIL*GCVAVV Trigger: AACTACAGCCACACAGCCCCACAGGATGACCTCATG...GCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR TCA 90 bp | GCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCACTCCAGTCCAAACCTaGAAGTGTACAGACAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AFQTFCLESLFEFRDHVSTPVQT*KCTDSA Trigger: GGCACTGTCTGTACACTTTCAGGTTTGGACTGGAGT...GCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR TCA 90 bp | GCTGCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAGCACAGATGAGTGAGTaGCTAAAGCTGTTCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: AAFQTFCLESLFEFRDHVAQMSE*LKLFQL Trigger: TAGCTGGAACAGCTTTAGTCACTCACTCATCTGTGC...TACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGCAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR GCA 90 bp | TTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTCCGTAAGTCAGGGTGCCTaGCATTGTTTTCTTGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLESLFEFRDHVSSVSQGA*HCFLDS Trigger: GGAGTCAAGAAAACAATGGCAGGCACCCTGACTTAC...GGAGCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR TCA 90 bp | GCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTTCTGCACAGATGAGTaGGTGACTAAAGCTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFQTFCLESLFEFRDHVSFCTDE*VTKAVP Trigger: TGGAACAGCTTTAGTCACTCACTCATCTGTGCAGAA...GCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CCA 90 bp | GCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCCATATGAGTAAATGTTaGTATAGATGCCAACGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFQTFCLESLFEFRDHVSHMSKC*YRCQRP Trigger: GGGACGTTGGCATCTATACCAACATTTACTCATATG...GCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS CCA 90 bp | CCTGGCCGGACATTAGTGGTGGCTATGGGAAGAACCTGGACTTTGTaGTTGAAGGTGGCAGGCTTAGCTAGTTTAATAAGCATGAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRTLVVAMGRTWTL*LKVAGLASLISMRS Trigger: TGACCTCATGCTTATTAAACTAGCTAAGCCTGCCACCTTCAACCACAAAGTCCAGGTTCTTCCCATAGCCACCACTAATGTCCGGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CAA 90 bp | GCTGCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCACCCAGCTGGCTTaGATGAGGACACCCACGCAG | + |
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Preference number: 5 (lower is better) Translates to: AAFQTFCLESLFEFRDHVSTQLA*MRTPTQ Trigger: CTGCGTGGGTGTCCTCATCAAAGCCAGCTGGGTGCT...TACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CAA 90 bp | GCTGCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTATCTGTGGCTGCTTCCTaGTTGAGTTTTCTGGCAGTC | + |
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Preference number: 5 (lower is better) Translates to: AAFQTFCLESLFEFRDHVSVAAS*LSFLAV Trigger: GACTGCCAGAAAACTCAACAAGGAAGCAGCCACAGA...TACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CAA 90 bp | TTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTCCACACCCACGCAGGGATaGAAGTTAGACTTGAGGTAT | + |
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Preference number: 5 (lower is better) Translates to: FQTFCLESLFEFRDHVSSTPTQG*KLDLRY Trigger: ATACCTCAAGTCTAACTTCAATCCCTGCGTGGGTGT...GGAGCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CAA 90 bp | TTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCTCCTCTGGATGGGATAAATaGTCTGCTCTGTCCCATCTC | + |
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Preference number: 5 (lower is better) Translates to: FQTFCLESLFEFRDHVSSSGWDK*SALSHL Trigger: GAGATGGGACAGAGCAGACAATTTATCCCATCCAGA...GGAGCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CAA 90 bp | GCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTAAGCGTGGCTGCTTCCTTGTaGAGTTTTCTGGCAGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFQTFCLESLFEFRDHVSVAASL*SFLAVF Trigger: AAAGACTGCCAGAAAACTCAACAAGGAAGCAGCCAC...GCTTACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS-3UTR CAA 90 bp | GCTGCATTCCAAACTTTCTGTTTGGAGAGTTTATTTGAGTTTAGGGACCATGTATCAATTCCCTGGAGCTaGTTTTTACAAATGACAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AAFQTFCLESLFEFRDHVSIPWS*FLQMTV Trigger: TACTGTCATTTGTAAAAACAAGCTCCAGGGAATTGA...TACATGGTCCCTAAACTCAAATAAACTCTCCAAACAGAAAGTTTGGAATGCAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS CAA 90 bp | GTGCCTGGCCGGACATTAGTGGTGGCTATGGGAAGAACCTGGACTTaGTGGTTGAAGGTGGCAGGCTTAGCTAGTTTAATAAGCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: VPGRTLVVAMGRTWT*WLKVAGLASLISMR Trigger: CCTCATGCTTATTAAACTAGCTAAGCCTGCCACCTTCAACCACAAAGTCCAGGTTCTTCCCATAGCCACCACTAATGTCCGGCCAGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS TCA 72 bp | GTGCCTGCCATTGTTTTCTTGACTCCAGTCCAAACCTaGAAGTGTACAGACAGTGCCTGGCCGGACATTAGT | + |
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Preference number: 6 (lower is better) Translates to: VPAIVFLTPVQT*KCTDSAWPDIS Trigger: ACTAATGTCCGGCCAGGCACTGTCTGTACACTTTCAGGTTTGGACTGGAGTCAAGAAAACAATGGCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS TCA 72 bp | TTCTGCCGTAAGTCAGGGTGCCTGCCATTGTTTTCTTaGCTCCAGTCCAAACCTGAAAGTGTACAGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: FCRKSGCLPLFS*LQSKPESVQTV Trigger: CACTGTCTGTACACTTTCAGGTTTGGACTGGAGTCAAGAAAACAATGGCAGGCACCCTGACTTACGGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS CAA 72 bp | CGGACATTAGTGGTGGCTATGGGAAGAACCTGGACTTaGTGGTTGAAGGTGGCAGGCTTAGCTAGTTTAATA | + |
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Preference number: 6 (lower is better) Translates to: RTLVVAMGRTWT*WLKVAGLASLI Trigger: TATTAAACTAGCTAAGCCTGCCACCTTCAACCACAAAGTCCAGGTTCTTCCCATAGCCACCACTAATGTCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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| CDS CCA 72 bp | ACATTAGTGGTGGCTATGGGAAGAACCTGGACTTTGTaGTTGAAGGTGGCAGGCTTAGCTAGTTTAATAAGC | + |
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Preference number: 6 (lower is better) Translates to: TLVVAMGRTWTL*LKVAGLASLIS Trigger: GCTTATTAAACTAGCTAAGCCTGCCACCTTCAACCACAAAGTCCAGGTTCTTCCCATAGCCACCACTAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031967.6 |
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