Pregenerated sensors for PRSS36 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070371Ensembl transcript IDs: ENSMUST00000094026.10, ENSMUST00000118755.8, ENSMUST00000141385.7, ENSMUST00000156152.3
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGAAAGCTaGTGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LRFKVASTEVQLSES*CSRGGRGPLQAREL Trigger: CAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| 3UTR-3UTR TCA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGCAATTATCTGAAAGCTaGTGCAGTAGAGGTGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKQLSES*CSRGGR Trigger: TCTTCCACCTCTACTGCATCAGCTTTCAGATAATTG...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| 3UTR TCA 72 bp | AAAGTAGCCAGCACTGAGGTCCAATTATCTGAAAGCTaGTGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: KVASTEVQLSES*CSRGGRGPLQA Trigger: GGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAGATAATTGGACCTCAGTGCTGGCTACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTCAGAGGGGCCCAGCTTaGCTGGCGAGGCCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCQRGPA*LARPGA Trigger: TGCGCCTGGCCTCGCCAGCCAAGCTGGGCCCCTCTG...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAAAGGGAGCCACTGCAGTaGAGACCCCAGGGCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RPGSWPVEPHSSPDGWCEREPLQ*RPQGGS Trigger: GGAACCGCCCTGGGGTCTTCACTGCAGTGGCTCCCT...TTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGGGCTCCCAGGGTCCTaGCTGTGGCTTCTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPGLPGS*LWLLEL Trigger: CAGCTCCAGAAGCCACAGTCAGGACCCTGGGAGCCC...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGCCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: KADAVEVEEALFRPGSWPPVGGS*PLPGQD Trigger: ATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGG...CGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCACCAGCAGCTGGCCCCTaGAGGAATACCCCCTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPPAAGP*RNTPWV Trigger: CACCCAGGGGGTATTCCTTCAGGGGCCAGCTGCTGG...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGGCCCGTCCTGGGAGTaGACGCCCAGCAGAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCGPSWE*TPSRTD Trigger: GTCAGTTCTGCTGGGCGTGCACTCCCAGGACGGGCC...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | CTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTCAGAGGTGCGGGGCTaGTGGGTGGGGAAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LFRPGSWPVEPHSSPDGWSEVRG*WVGKSR Trigger: TCTGGACTTCCCCACCCAGCAGCCCCGCACCTCTGA...CCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
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| CDS-3UTR TCA 90 bp | GGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCCGGGCTGGGCTCCCAGGGTCCTaGCTGTGGCTTCTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GRLSHIPALMGGVNRSRAGLPGS*LWLLEL Trigger: CAGCTCCAGAAGCCACAGTCAGGACCCTGGGAGCCC...AGCCCGGCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTCCTGCCATGGCCAAGTaGCAGGATGAGCGTCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCPAMAK*QDERPS Trigger: GCTCGGACGCTCATCCTGGCACTTGGCCATGGCAGG...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | AAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTGAGCTGTCAGAGGTaGGGGGCTGCTGGGTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: KADAVEVEEALFRPGSWPVSCQR*GAAGWG Trigger: TCCCCACCCAGCAGCCCCGCACCTCTGACAGCTCAC...CGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
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| CDS-3UTR GCA 90 bp | GGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCCGGGCTACGCGCGTCCTCAGCTaGAGCAGCGCCAGGTCCGAA | + |
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Preference number: 4 (lower is better) Translates to: GRLSHIPALMGGVNRSRATRVLS*SSARSE Trigger: TTCGGACCTGGCGCTGCTGCAGCTGAGGACGCGCGT...AGCCCGGCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGTCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWSRGPS*ECTPSR Trigger: TCTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGA...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGGAGGTGCGGGGCTGCTaGGTGGGGAAGTCCAGAAAG | + |
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Preference number: 4 (lower is better) Translates to: DAVEVEEALFRPGSWPVEEVRGC*VGKSRK Trigger: CTTTCTGGACTTCCCCACCCAGCAGCCCCGCACCTC...CTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
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| CDS-3UTR TCA 90 bp | AGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAAGGTAGGACTGACCACTaGGTCCTGGAAGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: RPGSWPVEPHSSPDGWCEGRTDH*VLEGSW Trigger: CCAGGAGCCTTCCAGGACTCAGTGGTCAGTCCTACC...TTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | GCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGGTAGGACTGACCACTaGGTCCTGGAAGGCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: ADAVEVEEALFRPGSWPVGRTDH*VLEGSW Trigger: CCAGGAGCCTTCCAGGACTCAGTGGTCAGTCCTACC...AACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAACGGCCGTACAGGCAATaGCACCACCAGCCGTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: RPGSWPVEPHSSPDGWCERPYRQ*HHQPFN Trigger: GTTGAACGGCTGGTGGTGTCATTGCCTGTACGGCCG...TTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGGGCCCGTCCTGGGAGTaGACGCCCAGCAGAACTGAC | + |
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Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWGPSWE*TPSRTD Trigger: GTCAGTTCTGCTGGGCGTGCACTCCCAGGACGGGCC...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | GCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTCTCATAGGGAGCCACTaGAGTGAAGACCCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: ADAVEVEEALFRPGSWPVLIGSH*SEDPRA Trigger: CGCCCTGGGGTCTTCACTGCAGTGGCTCCCTATGAG...AACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | CTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTTCCTCGAACAGCCATaGCCACGAGAACCCAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LFRPGSWPVEPHSSPDGWFLEQP*PREPRD Trigger: GTCCCTGGGTTCTCGTGGGCATGGCTGTTCGAGGAA...CCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGGTCCTGGAAGGCTCCTaGAGGGATGGGACTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: DAVEVEEALFRPGSWPVEVLEGS*RDGTDH Trigger: GTGGTCAGTCCCATCCCTCCAGGAGCCTTCCAGGAC...CTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATGTCCTGGAAGGCTCCTaGAGGGATGGGACTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: GPGAGRLSHIPALMGGVNVLEGS*RDGTDH Trigger: GTGGTCAGTCCCATCCCTCCAGGAGCCTTCCAGGAC...ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCACCGAAGCGAAGTCCCTaGAAGCGTTCTCGTGCGCCA | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPPKRSP*KRSRAP Trigger: TGGCGCACGAGAACGCTTCCAGGGACTTCGCTTCGG...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATGGACCTTCCTCAGTCTaGCACAGGAGGGGAGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GPGAGRLSHIPALMGGVNGPSSV*HRRGGA Trigger: AGCACCTCCCCTCCTGTGCCAGACTGAGGAAGGTCC...ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTTCAGCGAGGGATCAGTaGAGCCAGGAGGAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ADAVEVEEALFRPGSWPVSARDQ*SQEEEQ Trigger: CTGCTCCTCCTCCTGGCTCCACTGATCCCTCGCTGA...AACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCATTCGTCACGAAACAGTaGGCAGCGGAGAGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPFVTKQ*AAERTQ Trigger: CTGGGTCCTCTCCGCTGCTCACTGTTTCGTGACGAA...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAGGGTTCTGTATCCTaGCAGGAACCAGGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCEGSVS*QEPGPL Trigger: GAGGGGACCTGGTTCCTGGCAGGATACAGAACCCTC...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | GATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGGAGGGTTCTGTATCCTaGCAGGAACCAGGTCCCCTC | + |
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Preference number: 4 (lower is better) Translates to: DAVEVEEALFRPGSWPVEEGSVS*QEPGPL Trigger: GAGGGGACCTGGTTCCTGGCAGGATACAGAACCCTC...CTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTCTGACCACTGAGTCCTaGAAGGCTCCTGGAGGGATG | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCLTTES*KAPGGM Trigger: CATCCCTCCAGGAGCCTTCCAGGACTCAGTGGTCAG...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGGCTTCTGGAGCTGGCTaGGAAAGACAGGCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: DAVEVEEALFRPGSWPVEASGAG*ERQAQV Trigger: AACCTGGGCCTGTCTTTCCCAGCCAGCTCCAGAAGC...CTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCATGTGGCTTCTGGAGCTaGCTGGGAAAGACAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPCGFWS*LGKTGP Trigger: TGGGCCTGTCTTTCCCAGCCAGCTCCAGAAGCCACA...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTAGTCCAGAAAGCAGCTaGCGGGTGCCAAGACCCATC | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCSPESS*RVPRPI Trigger: GATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACT...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATCCAAAACCCAGCAGCTaGCCCCTGAAGGAATACCCC | + |
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Preference number: 4 (lower is better) Translates to: GPGAGRLSHIPALMGGVNPKPSS*PLKEYP Trigger: GGGGTATTCCTTCAGGGGCCAGCTGCTGGGTTTTGG...ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCAAAACCCAGCAGCTaGCCCCTGAAGGAATACCCC | + |
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Preference number: 4 (lower is better) Translates to: DAVEVEEALFRPGSWPVEPKPSS*PLKEYP Trigger: GGGGTATTCCTTCAGGGGCCAGCTGCTGGGTTTTGG...CTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGGACCCTGCTAAGTCTTaGGGGCAGAGGTCACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: DAVEVEEALFRPGSWPVEDPAKS*GQRSLP Trigger: AGGCAGTGACCTCTGCCCCCAAGACTTAGCAGGGTC...CTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| 3UTR CAA 72 bp | TGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTaGAGCCACATTCCAGCCCTGATGGGTGGTGTGAAT | + |
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Preference number: 4 (lower is better) Translates to: WKRPSSGPGAGR*SHIPALMGGVN Trigger: ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTAGCCTGAGAATACAGTaGGTGGCTGCTAGGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCSLRIQ*VAARTQ Trigger: CTGGGTCCTAGCAGCCACTCACTGTATTCTCAGGCT...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR TCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGAGGAGCCACCGAGATaGAGAAAATGGGCTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPEEPPR*RKWASP Trigger: GGGAGAAGCCCATTTTCTTCATCTCGGTGGCTCCTC...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR GCA 90 bp | AGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAAAAAGCAGCTGGCGGGTaGCAAGACCCATCTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: RPGSWPVEPHSSPDGWCEKAAGG*QDPSVR Trigger: TCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTT...TTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTATCAGGATGGTaGCCACTGAGCGCATGTGCG | + |
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Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWPVSGW*PLSACA Trigger: CGCACATGCGCTCAGTGGCCACCATCCTGATACCGG...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCACCTGACTGTGGCTTCTaGAGCTGGCTGGGAAAGACA | + |
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Preference number: 4 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPPDCGF*SWLGKT Trigger: TGTCTTTCCCAGCCAGCTCCAGAAGCCACAGTCAGG...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CCA 90 bp | GGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCCGGGCTAGTCCAGAAAGCAGCTaGCGGGTGCCAAGACCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSHIPALMGGVNRSRASPESS*RVPRPI Trigger: GATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACT...AGCCCGGCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGAAGCGAAGTCCCTaGAAGCGTTCTCGTGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWPKRSP*KRSRAP Trigger: TGGCGCACGAGAACGCTTCCAGGGACTTCGCTTCGG...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCGGACCTTCCTCAGTCTaGCACAGGAGGGGAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGRLSHIPALMGGVNRSGPSSV*HRRGGA Trigger: AGCACCTCCCCTCCTGTGCCAGACTGAGGAAGGTCC...GCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATATCCCTTCGTCCCGCTaGATAGCCAGCACACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GPGAGRLSHIPALMGGVNIPSSR*IASTQH Trigger: ATGTTGTGTGCTGGCTATCCAGCGGGACGAAGGGAT...ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGACCATGAGTCTGCATTaGGGAAAAGGCTCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: KADAVEVEEALFRPGSWPTMSLH*GKGSGS Trigger: CGACCCCGAGCCTTTTCCCCAATGCAGACTCATGGT...CGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | GGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATGCAGTGACAGAGTCGTaGTGTCAAGATGGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPGAGRLSHIPALMGGVNAVTES*CQDGDS Trigger: GCTGTCTCCATCTTGACACCACGACTCTGTCACTGC...ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCCAAAGCCAAAGCTGGTaGTTCCGGCCAGGAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: GAGRLSHIPALMGGVNRSQSQSW*FRPGTI Trigger: GATGGTTCCTGGCCGGAATCACCAGCTTTGGCTTTG...GCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGGAGGAGCCACCGAGATaGAGAAAATGGGCTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWEEPPR*RKWASP Trigger: GGGAGAAGCCCATTTTCTTCATCTCGGTGGCTCCTC...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCTTCAGGGCCAATGGCTaGAAACAGCTCCCGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGRLSHIPALMGGVNRSFRANG*KQLPVS Trigger: GGAAACCGGGAGCTGTTTGCAGCCATTGGCCCTGAA...GCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTTTCCCGCACTCTGGTTaGGCAAAGGTACAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCFPHSG*AKVQFS Trigger: AGAAAACTGTACCTTTGCTCAACCAGAGTGCGGGAA...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGTCGGAGACAACCATCTaGGAGGGTTCTGTATCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWSETTI*EGSVSC Trigger: GCAGGATACAGAACCCTCTCAGATGGTTGTCTCCGA...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCCGGGCTAGCACACAACATCCCTaGCAACAGCTGGAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLSHIPALMGGVNRSRASTQHP*QQLESQ Trigger: CTGACTTTCCAGCTGTTGCCAGGGATGTTGTGTGCT...AGCCCGGCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | GGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATAGGAGCCGGGCTGTCGTGGTGTCAAGATaGAGACAGCAGCAACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GRLSHIPALMGGVNRSRAVVVSR*RQQQLQ Trigger: CTGTAGTTGCTGCTGTCTCCATCTTGACACCACGAC...AGCCCGGCTCCTATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTCGTGGTGTCAAGATaGAGACAGCAGCAACTACAG | + |
|
Preference number: 4 (lower is better) Translates to: KADAVEVEEALFRPGSWPVVVSR*RQQQLQ Trigger: CTGTAGTTGCTGCTGTCTCCATCTTGACACCACGAC...CGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGTTCCCGCACTCTGGTTaGGCAAAGGTACAGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KADAVEVEEALFRPGSWPFPHSG*AKVQFS Trigger: AGAAAACTGTACCTTTGCTCAACCAGAGTGCGGGAA...CGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAACACCATGATTACAACTaGGAGAAACAGGTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RPGSWPVEPHSSPDGWCEHHDYN*EKQVMG Trigger: TCCCATCACCTGTTTCTCCCAGTTGTAATCATGGTG...TTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | AATTATCTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGTTCCTCGAACAGCCATaGCCACGAGAACCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: NYLKADAVEVEEALFRPGFLEQP*PREPRD Trigger: GTCCCTGGGTTCTCGTGGGCATGGCTGTTCGAGGAA...CCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAGATAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTCAGAGGGGCCCAGCTTaGCTGGCGAGGCCAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PPPRILRFKVASTEVQLSQRGPA*LARPGA Trigger: TGCGCCTGGCCTCGCCAGCCAAGCTGGGCCCCTCTG...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | AATTATCTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGTGTGGCTTCTGGAGCTaGCTGGGAAAGACAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NYLKADAVEVEEALFRPGCGFWS*LGKTGP Trigger: TGGGCCTGTCTTTCCCAGCCAGCTCCAGAAGCCACA...CCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAGATAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | AATTATCTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGTTCAGGGCCAATGGCTaGAAACAGCTCCCGGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NYLKADAVEVEEALFRPGFRANG*KQLPVS Trigger: GGAAACCGGGAGCTGTTTGCAGCCATTGGCCCTGAA...CCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAGATAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCACCATGATTACAACTaGGAGAAACAGGTGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKADAVEVEEALFRPGSWHHDYN*EKQVMG Trigger: TCCCATCACCTGTTTCTCCCAGTTGTAATCATGGTG...CCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | AATTATCTGAAAGCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGCCTGACTGTGGCTTCTaGAGCTGGCTGGGAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NYLKADAVEVEEALFRPGPDCGF*SWLGKT Trigger: TGTCTTTCCCAGCCAGCTCCAGAAGCCACAGTCAGG...CCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGCTTTCAGATAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTAGGGAGCCACTGCAGTaGAGACCCCAGGGCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPRILRFKVASTEVQLSREPLQ*RPQGGS Trigger: GGAACCGCCCTGGGGTCTTCACTGCAGTGGCTCCCT...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGAACCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PPRILRFKVASTEVQLSEPVGGS*PLPGQD Trigger: ATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGG...TTCAGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCCAGCCGTTCAACAGCTaGGCCTCCAGCTGCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPPPPPRILRFKVASQPFNS*ASSCAL Trigger: CAGCGCGCAGCTGGAGGCGCAGCTGTTGAACGGCTG...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGAATCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PPRILRFKVASTEVQLSESRGPS*ECTPSR Trigger: TCTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGA...TTCAGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCCCTGCCATGGCCAAGTaGCAGGATGAGCGTCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPPPPPRILRFKVASPAMAK*QDERPS Trigger: GCTCGGACGCTCATCCTGGCACTTGGCCATGGCAGG...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGAAACGCGCGTCCTCAGCTaGAGCAGCGCCAGGTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPRILRFKVASTEVQLSETRVLS*SSARSE Trigger: TTCGGACCTGGCGCTGCTGCAGCTGAGGACGCGCGT...TTCAGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTTGCGGGGCTGCTGGGTaGGGAAGTCCAGAAAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPRILRFKVASTEVQLSCGAAG*GSPESS Trigger: GCTGCTTTCTGGACTTCCCCACCCAGCAGCCCCGCA...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
||
| CDS-3UTR CCA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCTCAGCGAGGGATCAGTaGAGCCAGGAGGAGGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPPPPPRILRFKVASSARDQ*SQEEEQ Trigger: CTGCTCCTCCTCCTGGCTCCACTGATCCCTCGCTGA...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTTTCGTCACGAAACAGTaGGCAGCGGAGAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PPPRILRFKVASTEVQLSFVTKQ*AAERTQ Trigger: CTGGGTCCTCTCCGCTGCTCACTGTTTCGTGACGAA...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCGCTTCTGGAGCTGGCTaGGAAAGACAGGCCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPPPPPRILRFKVASASGAG*ERQAQV Trigger: AACCTGGGCCTGTCTTTCCCAGCCAGCTCCAGAAGC...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | CCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGAAGCTGGAAAGTCAGGTTaGAAGGGCCAGGACGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPRILRFKVASTEVQLSEAGKSG*KGQDGC Trigger: ACAGCCGTCCTGGCCCTTTCAACCTGACTTTCCAGC...TTCAGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGCCAGCAGCTGGCCCCTaGAGGAATACCCCCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKPAAGP*RNTPWV Trigger: CACCCAGGGGGTATTCCTTCAGGGGCCAGCTGCTGG...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGCAGCCGTTCAACAGCTaGGCCTCCAGCTGCGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKQPFNS*ASSCAL Trigger: CAGCGCGCAGCTGGAGGCGCAGCTGTTGAACGGCTG...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACCATGAGTCTGCATTaGGGAAAAGGCTCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPPPPPRILRFKVASTMSLH*GKGSGS Trigger: CGACCCCGAGCCTTTTCCCCAATGCAGACTCATGGT...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCATCCCTTCGTCCCGCTaGATAGCCAGCACACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: LLSVPPPPPRILRFKVASIPSSR*IASTQH Trigger: ATGTTGTGTGCTGGCTATCCAGCGGGACGAAGGGAT...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGCAGTGACAGAGTCGTaGTGTCAAGATGGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PPPRILRFKVASTEVQLSAVTES*CQDGDS Trigger: GCTGTCTCCATCTTGACACCACGACTCTGTCACTGC...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTACGGCCGTACAGGCAATaGCACCACCAGCCGTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVRPYRQ*HHQPFN Trigger: GTTGAACGGCTGGTGGTGTCATTGCCTGTACGGCCG...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGCAGGCTCACCTGCCATaGCCAAGTGCCAGGATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKQAHLP*PSARMS Trigger: GCTCATCCTGGCACTTGGCCATGGCAGGTGAGCCTG...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTACCGGTATCAGGATGGTaGCCACTGAGCGCATGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVPVSGW*PLSACA Trigger: CGCACATGCGCTCAGTGGCCACCATCCTGATACCGG...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTTACAGTTTTCTTCTCTaGGCTCCCAGGGTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PPPRILRFKVASTEVQLSYSFLL*APRVLT Trigger: AGTCAGGACCCTGGGAGCCCAGAGAAGAAAACTGTA...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTGAATACAGTTTTCTTCTCTaGGCTCCCAGGGTCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PPRILRFKVASTEVQLSEYSFLL*APRVLT Trigger: AGTCAGGACCCTGGGAGCCCAGAGAAGAAAACTGTA...TTCAGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGACCCTGCTAAGTCTTaGGGGCAGAGGTCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVDPAKS*GQRSLP Trigger: AGGCAGTGACCTCTGCCCCCAAGACTTAGCAGGGTC...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTACAAAGCCAAAGCTGGTaGTTCCGGCCAGGAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVQSQSW*FRPGTI Trigger: GATGGTTCCTGGCCGGAATCACCAGCTTTGGCTTTG...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR TCA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGAGCCTGAGAATACAGTaGGTGGCTGCTAGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKSLRIQ*VAARTQ Trigger: CTGGGTCCTAGCAGCCACTCACTGTATTCTCAGGCT...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR GCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAAAAGCAGCTGGCGGGTaGCAAGACCCATCTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVKAAGG*QDPSVR Trigger: TCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTT...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAATCCCTGGCAACAGCTaGAAAGTCAGGTTGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVIPGNS*KVRLKG Trigger: CCCTTTCAACCTGACTTTCCAGCTGTTGCCAGGGAT...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGATCCCTGGCAACAGCTaGAAAGTCAGGTTGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKIPGNS*KVRLKG Trigger: CCCTTTCAACCTGACTTTCCAGCTGTTGCCAGGGAT...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CCA 90 bp | ACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAAGCACACAACATCCCTaGCAACAGCTGGAAAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFLLSVPPPPPRILRFKVSTQHP*QQLESQ Trigger: CTGACTTTCCAGCTGTTGCCAGGGATGTTGTGTGCT...TACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | GGCACGAGGCAGGCAGACCGGCCGCACAGAGGGGCCCAGCTTGGCTaGCGAGGCCAGGCGCAGCAGAGCCAAGTCTGCGCCCAGTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GTRQADRPHRGAQLG*RGQAQQSQVCAQFH Trigger: GTGGAACTGGGCGCAGACTTGGCTCTGCTGCGCCTGGCCTCGCCAGCCAAGCTGGGCCCCTCTGTGCGGCCGGTCTGCCTGCCTCGTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | GCGAGGCACGAGGCAGGCAGACCGGCCGCACAGAGGGGCCCAGCTTaGCTGGCGAGGCCAGGCGCAGCAGAGCCAAGTCTGCGCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ARHEAGRPAAQRGPA*LARPGAAEPSLRPV Trigger: AACTGGGCGCAGACTTGGCTCTGCTGCGCCTGGCCTCGCCAGCCAAGCTGGGCCCCTCTGTGCGGCCGGTCTGCCTGCCTCGTGCCTCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | TGCAGCAGCGCCAGGTCCGAAGCGAAGTCCCTGGAAGCGTTCTCGTaGGCCACGAGGCGCGCCACCCTCTCCTCCTCCGGACGGGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSSARSEAKSLEAFS*ATRRATLSSSGREG Trigger: GCCCTCCCGTCCGGAGGAGGAGAGGGTGGCGCGCCTCGTGGCGCACGAGAACGCTTCCAGGGACTTCGCTTCGGACCTGGCGCTGCTGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS TCA 90 bp | TCTCCTGGCCGCGGCACGGTCTCCCCCTGGCGGCCGTACAGGCAATaGCACCACCAGCCGTTCAACAGCTGCGCCTCCAGCTGCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPGRGTVSPWRPYRQ*HHQPFNSCASSCAL Trigger: CAGCGCGCAGCTGGAGGCGCAGCTGTTGAACGGCTGGTGGTGTCATTGCCTGTACGGCCGCCAGGGGGAGACCGTGCCGCGGCCAGGAGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | CGCGCGTCCTCAGCTGCAGCAGCGCCAGGTCCGAAGCGAAGTCCCTaGAAGCGTTCTCGTGCGCCACGAGGCGCGCCACCCTCTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RASSAAAAPGPKRSP*KRSRAPRGAPPSPP Trigger: AGGAGGAGAGGGTGGCGCGCCTCGTGGCGCACGAGAACGCTTCCAGGGACTTCGCTTCGGACCTGGCGCTGCTGCAGCTGAGGACGCGCG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | CACACGGCACTCGGGGCCGCGGTCAGGTTCACGCGCGTCCTCAGCTaGAGCAGCGCCAGGTCCGAAGCGAAGTCCCTGGAAGCGTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: HTALGAAVRFTRVLS*SSARSEAKSLEAFS Trigger: CGAGAACGCTTCCAGGGACTTCGCTTCGGACCTGGCGCTGCTGCAGCTGAGGACGCGCGTGAACCTGACCGCGGCCCCGAGTGCCGTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAACAGAGGGGCCCAGCTaGGCTGGCGAGGCCAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPTEGPS*AGEARR Trigger: GCGCCTGGCCTCGCCAGCCAAGCTGGGCCCCTCTGT...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | TTCCTCCTCCTGGTAGGCGGGACAAAGCAAGTGCGGCGGGTCTCCTaGCCGCGGCACGGTCTCCCCCTGGCGGCCGTACAGGCAATGACA | + |
|
Preference number: 5 (lower is better) Translates to: FLLLVGGTKQVRRVS*PRHGLPLAAVQAMT Trigger: TGTCATTGCCTGTACGGCCGCCAGGGGGAGACCGTGCCGCGGCCAGGAGACCCGCCGCACTTGCTTTGTCCCGCCTACCAGGAGGAGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | ATGGTGGCCACTGAGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGAACTGACAATTCGTCCGCGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MVATERMCAPSRGPS*ECTPSRTDNSSAGS Trigger: GGAGCCCGCGGACGAATTGTCAGTTCTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGCCACCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | GCCACTGAGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCTGGGAGTaGACGCCCAGCAGAACTGACAATTCGTCCGCGGGCTCCAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ATERMCAPSRGPSWE*TPSRTDNSSAGSKV Trigger: AACCTTGGAGCCCGCGGACGAATTGTCAGTTCTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS TCA 90 bp | AGACCCCAGGGCGGTTCCTCCGTCCACAGCCAAAGCCAAAGCTGGTaGTTCCGGCCAGGAACCATCGGCCTCCGTCCTCACAGACCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPQGGSSVHSQSQSW*FRPGTIGLRPHRPA Trigger: CGCTGGTCTGTGAGGACGGAGGCCGATGGTTCCTGGCCGGAATCACCAGCTTTGGCTTTGGCTGTGGACGGAGGAACCGCCCTGGGGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | GGGGCCCAGCTTGGCTGGCGAGGCCAGGCGCAGCAGAGCCAAGTCTaGGCCCAGTTCCACTGTGCTGTAGTTGTCCGGTATCAGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: GAQLGWRGQAQQSQV*AQFHCAVVVRYQDG Trigger: ACCATCCTGATACCGGACAACTACAGCACAGTGGAACTGGGCGCAGACTTGGCTCTGCTGCGCCTGGCCTCGCCAGCCAAGCTGGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | CTGCGCCCAGTTCCACTGTGCTGTAGTTGTCCGGTATCAGGATGGTaGCCACTGAGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LRPVPLCCSCPVSGW*PLSACALLPGARPG Trigger: CCCAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGCCACCATCCTGATACCGGACAACTACAGCACAGTGGAACTGGGCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | CCTAAGTGCCGGGGCAGACGGATGCTGACGACAGACCGAGATACCTaGTGGCCCTGTGGGAGGGAGCTGACCCCTGCCCGGCCAAGATAT | + |
|
Preference number: 5 (lower is better) Translates to: PKCRGRRMLTTDRDT*WPCGRELTPARPRY Trigger: ATATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGGGCCACCAGGTATCTCGGTCTGTCGTCAGCATCCGTCTGCCCCGGCACTTAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
||
| CDS CCA 90 bp | TCCTCCGGACGGGAGGGCAGCAGCACCCGCCAGGTCTCAAAATCGTaGGGTGAGTCCAGAAAGCAGCTGGCGGGTGCCAAGACCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSGREGSSTRQVSKS*GESRKQLAGAKTHL Trigger: CAGATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTCACCCCACGATTTTGAGACCTGGCGGGTGCTGCTGCCCTCCCGTCCGGAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118755.8 |
||
| CDS-3UTR CAA 90 bp | GCTGATGCAGTAGAGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGATGTGGCCCCCACCTaGATGCAGGCTCACCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADAVEVEEALFRPGSWPVDVAPT*MQAHLP Trigger: TGGCAGGTGAGCCTGCATCAAGGTGGGGGCCACATC...AACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCTCTACTGCATCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CAA 90 bp | GGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTGAATGATGTGGCCCCCACCTaGATGCAGGCTCACCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPGAGRLSHIPALMGGVNDVAPT*MQAHLP Trigger: TGGCAGGTGAGCCTGCATCAAGGTGGGGGCCACATC...ATTCACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS TCA 90 bp | CGGACGGGAGGGCAGCAGCACCCGCCAGGTCTCAAAATCGTGGGGTaGGTCCAGAAAGCAGCTGGCGGGTGCCAAGACCCATCTGTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTGGQQHPPGLKIVG*VQKAAGGCQDPSVR Trigger: TCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTCACCCCACGATTTTGAGACCTGGCGGGTGCTGCTGCCCTCCCGTCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | AAGTGCCGGGGCAGACGGATGCTGACGACAGACCGAGATACCTGGTaGCCCTGTGGGAGGGAGCTGACCCCTGCCCGGCCAAGATATACT | + |
|
Preference number: 5 (lower is better) Translates to: KCRGRRMLTTDRDTW*PCGRELTPARPRYT Trigger: AGTATATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGGGCCACCAGGTATCTCGGTCTGTCGTCAGCATCCGTCTGCCCCGGCACTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS TCA 90 bp | CAGTTCCACTGTGCTGTAGTTGTCCGGTATCAGGATGGTGGCCACTaGGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCTGGGAGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QFHCAVVVRYQDGGH*AHVRSFQGPVLGVH Trigger: GTGCACTCCCAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGCCACCATCCTGATACCGGACAACTACAGCACAGTGGAACTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | GCGAGGCCAGGCGCAGCAGAGCCAAGTCTGCGCCCAGTTCCACTGTaGTGTAGTTGTCCGGTATCAGGATGGTGGCCACTGAGCGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: ARPGAAEPSLRPVPL*CSCPVSGWWPLSAC Trigger: ACATGCGCTCAGTGGCCACCATCCTGATACCGGACAACTACAGCACAGTGGAACTGGGCGCAGACTTGGCTCTGCTGCGCCTGGCCTCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | CAGGGCCAATGGCTGCAAACAGCTCCCGGTTTCCTCGAACAGCCATaGCCACGAGAACCCAGGGACCTTCCTCAGTCTGGCACAGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QGQWLQTAPGFLEQP*PREPRDLPQSGTGG Trigger: CCCTCCTGTGCCAGACTGAGGAAGGTCCCTGGGTTCTCGTGGGCATGGCTGTTCGAGGAAACCGGGAGCTGTTTGCAGCCATTGGCCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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| CDS CCA 90 bp | AGTCTGCGCCCAGTTCCACTGTGCTGTAGTTGTCCGGTATCAGGATaGTGGCCACTGAGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SLRPVPLCCSCPVSG*WPLSACALLPGARP Trigger: AGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGCCACCATCCTGATACCGGACAACTACAGCACAGTGGAACTGGGCGCAGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | TGTCAGAGGTGCGGGGCTGCTGGGTGGGGAAGTCCAGAAAGCAGCTaGCGGGTGCCAAGACCCATCTGTCAGACACCAGAGCTCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQRCGAAGWGSPESS*RVPRPICQTPELHS Trigger: GCTATGGAGCTCTGGTGTCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTTCCCCACCCAGCAGCCCCGCACCTCTGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
||
| CDS-3UTR CAA 90 bp | AGGTGGAAGAGGCCCTCTTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAACGGCTGTAGAGACATaGACAGGCAGCCTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RWKRPSSGPGAGRLSHIPTAVET*TGSLSQ Trigger: CTGGGAGAGGCTGCCTGTCAATGTCTCTACAGCCGT...TGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAAGAGGGCCTCTTCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGGCCCGGGAGCTGGCCGGTTGAGCCACATTCCAGCCCTGATGGGTGGTGTAGCTGGAAAGTCAGGTaGAAAGGGCCAGGACGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRPGSWPVEPHSSPDGWCSWKVR*KGPGRL Trigger: CAGCCGTCCTGGCCCTTTCAACCTGACTTTCCAGCT...ACACCACCCATCAGGGCTGGAATGTGGCTCAACCGGCCAGCTCCCGGGCCTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | CCTCGAACAGCCATGCCCACGAGAACCCAGGGACCTTCCTCAGTCTaGCACAGGAGGGGAGGTGCTGAGGTGACCTCACATCTATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRTAMPTRTQGPSSV*HRRGGAEVTSHLSS Trigger: GGAGGATAGATGTGAGGTCACCTCAGCACCTCCCCTCCTGTGCCAGACTGAGGAAGGTCCCTGGGTTCTCGTGGGCATGGCTGTTCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
||
| CDS TCA 90 bp | CCATCACGTGTTCCCGAATCCACGACTCATAGGGAGCCACTGCAGTaGAGACCCCAGGGCGGTTCCTCCGTCCACAGCCAAAGCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSRVPESTTHREPLQ*RPQGGSSVHSQSQS Trigger: GCTTTGGCTTTGGCTGTGGACGGAGGAACCGCCCTGGGGTCTTCACTGCAGTGGCTCCCTATGAGTCGTGGATTCGGGAACACGTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | CCTGGGGCCACCAGAATCCCAGTGCAGACTCTATCACCAGTCACATaGACCTCCGTCAGCCAGGGCCACAACACACCAGCTGGAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PGATRIPVQTLSPVT*TSVSQGHNTPAGVD Trigger: ATCCACTCCAGCTGGTGTGTTGTGGCCCTGGCTGACGGAGGTGCATGTGACTGGTGATAGAGTCTGCACTGGGATTCTGGTGGCCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
||
| CDS CCA 90 bp | CTGCCAGGAACCAGGTCCCCTCCTCACGGCACAGAAGGCTCCAACTaGAATCTTTCCAACATAGGCCCGCCTCTTCCTCCTCCTGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPGTRSPPHGTEGSN*NLSNIGPPLPPPGR Trigger: CCTACCAGGAGGAGGAAGAGGCGGGCCTATGTTGGAAAGATTCCAGTTGGAGCCTTCTGTGCCGTGAGGAGGGGACCTGGTTCCTGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | GGGCAGACGGATGCTGACGACAGACCGAGATACCTGGTGGCCCTGTaGGAGGGAGCTGACCCCTGCCCGGCCAAGATATACTTCAATGTA | + |
|
Preference number: 5 (lower is better) Translates to: GQTDADDRPRYLVAL*EGADPCPAKIYFNV Trigger: TACATTGAAGTATATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGGGCCACCAGGTATCTCGGTCTGTCGTCAGCATCCGTCTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
||
| CDS CCA 90 bp | GCACCCGCCAGGTCTCAAAATCGTGGGGTGAGTCCAGAAAGCAGCTaGCGGGTGCCAAGACCCATCTGTCAGACACCAGAGCTCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: APARSQNRGVSPESS*RVPRPICQTPELHS Trigger: GCTATGGAGCTCTGGTGTCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTCACCCCACGATTTTGAGACCTGGCGGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118755.8 |
||
| CDS GCA 90 bp | GACAGACCGAGATACCTGGTGGCCCTGTGGGAGGGAGCTGACCCCTaGCCGGCCAAGATATACTTCAATGTAGGGCACTGTTGTAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DRPRYLVALWEGADP*PAKIYFNVGHCCRA Trigger: GGCTCTACAACAGTGCCCTACATTGAAGTATATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGGGCCACCAGGTATCTCGGTCTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
||
| CDS CCA 90 bp | GAAGAGGGCTCAGGGCGGCCGCAGTCTAGGTCTTCAAATTCTCCTTaGGTAGGACTGACCACTGAGTCCTGGAAGGCTCCTGGAGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: EEGSGRPQSRSSNSP*VGLTTESWKAPGGM Trigger: CATCCCTCCAGGAGCCTTCCAGGACTCAGTGGTCAGTCCTACCCAAGGAGAATTTGAAGACCTAGACTGCGGCCGCCCTGAGCCCTCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | TCACATGCACCTCCGTCAGCCAGGGCCACAACACACCAGCTGGAGTaGATTTTGGCCTTAGGCCACAGGCACCGTGCTCAGTATGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHAPPSARATTHQLE*ILALGHRHRAQYVW Trigger: CCACACATACTGAGCACGGTGCCTGTGGCCTAAGGCCAAAATCCACTCCAGCTGGTGTGTTGTGGCCCTGGCTGACGGAGGTGCATGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
||
| CDS TCA 90 bp | CCCAGGGACCTTCCTCAGTCTGGCACAGGAGGGGAGGTGCTGAGGTaGCCTCACATCTATCCTCCTGTCCCTCTGAATAGAGGACACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRDLPQSGTGGEVLR*PHIYPPVPLNRGHR Trigger: TCTGTGTCCTCTATTCAGAGGGACAGGAGGATAGATGTGAGGTCACCTCAGCACCTCCCCTCCTGTGCCAGACTGAGGAAGGTCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
||
| CDS CCA 90 bp | TTTTCTTCTCTGGGCTCCCAGGGTCCTGACTGTGGCTTCTGGAGCTaGCTGGGAAAGACAGGCCCAGGTTCTGAACCCATCACGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSSLGSQGPDCGFWS*LGKTGPGSEPITCS Trigger: GGAACACGTGATGGGTTCAGAACCTGGGCCTGTCTTTCCCAGCCAGCTCCAGAAGCCACAGTCAGGACCCTGGGAGCCCAGAGAAGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
||
| CDS CCA 90 bp | GAGCCTTCCCGCACTCTGGTTGAGCAAAGGTACAGTTTTCTTCTCTaGGCTCCCAGGGTCCTGACTGTGGCTTCTGGAGCTGGCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EPSRTLVEQRYSFLL*APRVLTVASGAGWE Trigger: TTCCCAGCCAGCTCCAGAAGCCACAGTCAGGACCCTGGGAGCCCAGAGAAGAAAACTGTACCTTTGCTCAACCAGAGTGCGGGAAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CAA 90 bp | CCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCACTGAGGTCCAATTATCTACAGAGGGGCCCAGCTaGGCTGGCGAGGCCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: PPPRILRFKVASTEVQLSTEGPS*AGEARR Trigger: GCGCCTGGCCTCGCCAGCCAAGCTGGGCCCCTCTGT...AGATAATTGGACCTCAGTGCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS TCA 90 bp | GATAGCCAGCACACAACATCCCTGGCAACAGCTGGAAAGTCAGGTTaGAAGGGCCAGGACGGCTGTAGAGACATTGACAGGCAGCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DSQHTTSLATAGKSG*KGQDGCRDIDRQPL Trigger: GAGAGGCTGCCTGTCAATGTCTCTACAGCCGTCCTGGCCCTTTCAACCTGACTTTCCAGCTGTTGCCAGGGATGTTGTGTGCTGGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS GCA 90 bp | AACACACCAGCTGGAGTGGATTTTGGCCTTAGGCCACAGGCACCGTaGTCAGTATGTGTGGGACAAGTCTGTTTCTCGGTCTCCTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: NTPAGVDFGLRPQAP*SVCVGQVCFSVSSP Trigger: AGGGGAGGAGACCGAGAAACAGACTTGTCCCACACATACTGAGCACGGTGCCTGTGGCCTAAGGCCAAAATCCACTCCAGCTGGTGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS GCA 90 bp | TTCTCCCACGGTTTGCGATATCCATGTAGCTTCAGGGCCAATGGCTaGAAACAGCTCCCGGTTTCCTCGAACAGCCATGCCCACGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: FSHGLRYPCSFRANG*KQLPVSSNSHAHEN Trigger: GTTCTCGTGGGCATGGCTGTTCGAGGAAACCGGGAGCTGTTTGCAGCCATTGGCCCTGAAGCTACATGGATATCGCAAACCGTGGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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| CDS CCA 90 bp | GGTCCCAGGAGTCAGAATACCCGGATAGAGGCAGTGACAGAGTCGTaGTGTCAAGATGGAGACAGCAGCAACTACAGGAACTCTGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GPRSQNTRIEAVTES*CQDGDSSNYRNSVL Trigger: CAGGACAGAGTTCCTGTAGTTGCTGCTGTCTCCATCTTGACACCACGACTCTGTCACTGCCTCTATCCGGGTATTCTGACTCCTGGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS CCA 90 bp | GGTCCCAGGAGTCAGAATACCCGGATAGAGGCAGTGACAGAGTCGTaGTGTCAAGATGGAGACAGCAGCAACTACAGGAACATGAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: GPRSQNTRIEAVTES*CQDGDSSNYRNMSL Trigger: CAGACTCATGTTCCTGTAGTTGCTGCTGTCTCCATCTTGACACCACGACTCTGTCACTGCCTCTATCCGGGTATTCTGACTCCTGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141385.7 |
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| CDS-3UTR CAA 90 bp | TTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGTAGCCAGCCAGCTGGAGTGGATTTaGGCCTTAGGCCACAGGCAC | + |
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Preference number: 5 (lower is better) Translates to: LLSVPPPPPRILRFKVASQLEWI*ALGHRH Trigger: GTGCCTGTGGCCTAAGGCCAAAATCCACTCCAGCTG...GCTGGCTACTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS-3UTR CAA 90 bp | TTACATTTTTATTGTCTGTTCCTCCTCCACCCCCAAGGATTCTTAGATTTAAAGAGCTGGAAAGTCAGGTaGAAAGGGCCAGGACGGCTG | + |
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Preference number: 5 (lower is better) Translates to: LHFYCLFLLHPQGFLDLKSWKVR*KGPGRL Trigger: CAGCCGTCCTGGCCCTTTCAACCTGACTTTCCAGCT...CTTTAAATCTAAGAATCCTTGGGGGTGGAGGAGGAACAGACAATAAAAATGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CCA 72 bp | CTGGTAGGCGGGACAAAGCAAGTGCGGCGGGTCTCCTaGCCGCGGCACGGTCTCCCCCTGGCGGCCGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LVGGTKQVRRVS*PRHGLPLAAVQ Trigger: CTGTACGGCCGCCAGGGGGAGACCGTGCCGCGGCCAGGAGACCCGCCGCACTTGCTTTGTCCCGCCTACCAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS GCA 72 bp | GCCAGGTCCGAAGCGAAGTCCCTGGAAGCGTTCTCGTaGGCCACGAGGCGCGCCACCCTCTCCTCCTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: ARSEAKSLEAFS*ATRRATLSSSG Trigger: TCCGGAGGAGGAGAGGGTGGCGCGCCTCGTGGCGCACGAGAACGCTTCCAGGGACTTCGCTTCGGACCTGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS GCA 72 bp | CTCGGGGCCGCGGTCAGGTTCACGCGCGTCCTCAGCTaGAGCAGCGCCAGGTCCGAAGCGAAGTCCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGAAVRFTRVLS*SSARSEAKSLE Trigger: TTCCAGGGACTTCGCTTCGGACCTGGCGCTGCTGCAGCTGAGGACGCGCGTGAACCTGACCGCGGCCCCGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CCA 72 bp | TCAGCTGCAGCAGCGCCAGGTCCGAAGCGAAGTCCCTaGAAGCGTTCTCGTGCGCCACGAGGCGCGCCACCC | + |
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Preference number: 6 (lower is better) Translates to: SAAAAPGPKRSP*KRSRAPRGAPP Trigger: GGGTGGCGCGCCTCGTGGCGCACGAGAACGCTTCCAGGGACTTCGCTTCGGACCTGGCGCTGCTGCAGCTGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS GCA 72 bp | CGCATGTGCGCTCCTTCCAGGGGCCCGTCCTGGGAGTaGACGCCCAGCAGAACTGACAATTCGTCCGCGGGC | + |
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Preference number: 6 (lower is better) Translates to: RMCAPSRGPSWE*TPSRTDNSSAG Trigger: GCCCGCGGACGAATTGTCAGTTCTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGAAGGAGCGCACATGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CCA 72 bp | CGGGAGGGCAGCAGCACCCGCCAGGTCTCAAAATCGTaGGGTGAGCTGTCAGAGGTGCGGGGCTGCTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: REGSSTRQVSKS*GELSEVRGCWV Trigger: CACCCAGCAGCCCCGCACCTCTGACAGCTCACCCCACGATTTTGAGACCTGGCGGGTGCTGCTGCCCTCCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
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| CDS GCA 72 bp | TTGTCCGGTATCAGGATGGTGGCCACTGAGCGCATGTaGGCTCCTTCCAGGGGCCCGTCCTGGGAGTGCACG | + |
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Preference number: 6 (lower is better) Translates to: LSGIRMVATERM*APSRGPSWECT Trigger: CGTGCACTCCCAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGCCACCATCCTGATACCGGACAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS TCA 72 bp | GGCGGTTCCTCCGTCCACAGCCAAAGCCAAAGCTGGTaGTTCCGGCCAGGAACCATCGGCCTCCGTCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GGSSVHSQSQSW*FRPGTIGLRPH Trigger: GTGAGGACGGAGGCCGATGGTTCCTGGCCGGAATCACCAGCTTTGGCTTTGGCTGTGGACGGAGGAACCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS TCA 72 bp | GGGCAGCAGCACCCGCCAGGTCTCAAAATCGTGGGGTaGGTCCAGAAAGCAGCTGGCGGGTGCCAAGACCCA | + |
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Preference number: 6 (lower is better) Translates to: GQQHPPGLKIVG*VQKAAGGCQDP Trigger: TGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTCACCCCACGATTTTGAGACCTGGCGGGTGCTGCTGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118755.8 |
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| CDS CCA 72 bp | ACTGAGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCTaGGAGTGCACGCCCAGCAGAACTGACAATTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: TERMCAPSRGPS*ECTPSRTDNSS Trigger: GGACGAATTGTCAGTTCTGCTGGGCGTGCACTCCCAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CCA 72 bp | TGCGGGGCTGCTGGGTGGGGAAGTCCAGAAAGCAGCTaGCGGGTGCCAAGACCCATCTGTCAGACACCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CGAAGWGSPESS*RVPRPICQTPE Trigger: CTCTGGTGTCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTTCCCCACCCAGCAGCCCCGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094026.10 |
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| CDS TCA 72 bp | TGTGCTGTAGTTGTCCGGTATCAGGATGGTGGCCACTaGGCGCATGTGCGCTCCTTCCAGGGGCCCGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CAVVVRYQDGGH*AHVRSFQGPVL Trigger: CAGGACGGGCCCCTGGAAGGAGCGCACATGCGCTCAGTGGCCACCATCCTGATACCGGACAACTACAGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CCA 72 bp | CTGGGCTCCCAGGGTCCTGACTGTGGCTTCTGGAGCTaGCTGGGAAAGACAGGCCCAGGTTCTGAACCCATC | + |
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Preference number: 6 (lower is better) Translates to: LGSQGPDCGFWS*LGKTGPGSEPI Trigger: GATGGGTTCAGAACCTGGGCCTGTCTTTCCCAGCCAGCTCCAGAAGCCACAGTCAGGACCCTGGGAGCCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS TCA 72 bp | GTTCCCGAATCCACGACTCATAGGGAGCCACTGCAGTaGAGACCCCAGGGCGGTTCCTCCGTCCACAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: VPESTTHREPLQ*RPQGGSSVHSQ Trigger: TTGGCTGTGGACGGAGGAACCGCCCTGGGGTCTTCACTGCAGTGGCTCCCTATGAGTCGTGGATTCGGGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS GCA 72 bp | CACGTGTTCCCGAATCCACGACTCATAGGGAGCCACTaGAGTGAAGACCCCAGGGCGGTTCCTCCGTCCACA | + |
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Preference number: 6 (lower is better) Translates to: HVFPNPRLIGSH*SEDPRAVPPST Trigger: TGTGGACGGAGGAACCGCCCTGGGGTCTTCACTGCAGTGGCTCCCTATGAGTCGTGGATTCGGGAACACGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS GCA 72 bp | TGGCTGCAAACAGCTCCCGGTTTCCTCGAACAGCCATaGCCACGAGAACCCAGGGACCTTCCTCAGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: WLQTAPGFLEQP*PREPRDLPQSG Trigger: GCCAGACTGAGGAAGGTCCCTGGGTTCTCGTGGGCATGGCTGTTCGAGGAAACCGGGAGCTGTTTGCAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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| CDS CAA 90 bp | GCACCTCCGTCAGCCAGGGCCACAACACACCAGCTGGAGTGGATTTaGGCCTTAGGCCACAGGCACCGTGCTCAGTATGTGTGGGACAAG | + |
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Preference number: 6 (lower is better) Translates to: APPSARATTHQLEWI*ALGHRHRAQYVWDK Trigger: CTTGTCCCACACATACTGAGCACGGTGCCTGTGGCCTAAGGCCAAAATCCACTCCAGCTGGTGTGTTGTGGCCCTGGCTGACGGAGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS TCA 72 bp | CAGACCGAGATACCTGGTGGCCCTGTGGGAGGGAGCTaGCCCCTGCCCGGCCAAGATATACTTCAATGTAGG | + |
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Preference number: 6 (lower is better) Translates to: QTEIPGGPVGGS*PLPGQDILQCR Trigger: CCTACATTGAAGTATATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGGGCCACCAGGTATCTCGGTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS GCA 72 bp | AGATACCTGGTGGCCCTGTGGGAGGGAGCTGACCCCTaGCCGGCCAAGATATACTTCAATGTAGGGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: RYLVALWEGADP*PAKIYFNVGHC Trigger: ACAGTGCCCTACATTGAAGTATATCTTGGCCGGGCAGGGGTCAGCTCCCTCCCACAGGGCCACCAGGTATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS CCA 72 bp | ACCAGGTCCCCTCCTCACGGCACAGAAGGCTCCAACTaGAATCTTTCCAACATAGGCCCGCCTCTTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TRSPPHGTEGSN*NLSNIGPPLPP Trigger: AGGAGGAAGAGGCGGGCCTATGTTGGAAAGATTCCAGTTGGAGCCTTCTGTGCCGTGAGGAGGGGACCTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CAA 72 bp | TCAGCCAGGGCCACAACACACCAGCTGGAGTGGATTTaGGCCTTAGGCCACAGGCACCGTGCTCAGTATGTG | + |
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Preference number: 6 (lower is better) Translates to: SARATTHQLEWI*ALGHRHRAQYV Trigger: CACATACTGAGCACGGTGCCTGTGGCCTAAGGCCAAAATCCACTCCAGCTGGTGTGTTGTGGCCCTGGCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS CCA 72 bp | TCAGGGCGGCCGCAGTCTAGGTCTTCAAATTCTCCTTaGGTAGGACTGACCACTGAGTCCTGGAAGGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SGRPQSRSSNSP*VGLTTESWKAP Trigger: AGGAGCCTTCCAGGACTCAGTGGTCAGTCCTACCCAAGGAGAATTTGAAGACCTAGACTGCGGCCGCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CCA 72 bp | AGGTCTCAAAATCGTGGGGTGAGTCCAGAAAGCAGCTaGCGGGTGCCAAGACCCATCTGTCAGACACCAGAG | + |
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Preference number: 6 (lower is better) Translates to: RSQNRGVSPESS*RVPRPICQTPE Trigger: CTCTGGTGTCTGACAGATGGGTCTTGGCACCCGCCAGCTGCTTTCTGGACTCACCCCACGATTTTGAGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118755.8 |
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| CDS TCA 72 bp | CTTCTGGAGCTGGCTGGGAAAGACAGGCCCAGGTTCTaGACCCATCACGTGTTCCCGAATCCACGACTCATA | + |
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Preference number: 6 (lower is better) Translates to: LLELAGKDRPRF*THHVFPNPRLI Trigger: TATGAGTCGTGGATTCGGGAACACGTGATGGGTTCAGAACCTGGGCCTGTCTTTCCCAGCCAGCTCCAGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS TCA 72 bp | CTTCCTCAGTCTGGCACAGGAGGGGAGGTGCTGAGGTaGCCTCACATCTATCCTCCTGTCCCTCTGAATAGA | + |
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Preference number: 6 (lower is better) Translates to: LPQSGTGGEVLR*PHIYPPVPLNR Trigger: TCTATTCAGAGGGACAGGAGGATAGATGTGAGGTCACCTCAGCACCTCCCCTCCTGTGCCAGACTGAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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| CDS GCA 72 bp | GCTGGAGTGGATTTTGGCCTTAGGCCACAGGCACCGTaGTCAGTATGTGTGGGACAAGTCTGTTTCTCGGTC | + |
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Preference number: 6 (lower is better) Translates to: AGVDFGLRPQAP*SVCVGQVCFSV Trigger: GACCGAGAAACAGACTTGTCCCACACATACTGAGCACGGTGCCTGTGGCCTAAGGCCAAAATCCACTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000156152.3 |
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| CDS GCA 72 bp | GGTTTGCGATATCCATGTAGCTTCAGGGCCAATGGCTaGAAACAGCTCCCGGTTTCCTCGAACAGCCATGCC | + |
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Preference number: 6 (lower is better) Translates to: GLRYPCSFRANG*KQLPVSSNSHA Trigger: GGCATGGCTGTTCGAGGAAACCGGGAGCTGTTTGCAGCCATTGGCCCTGAAGCTACATGGATATCGCAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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| CDS TCA 72 bp | CACACAACATCCCTGGCAACAGCTGGAAAGTCAGGTTaGAAGGGCCAGGACGGCTGTAGAGACATTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: HTTSLATAGKSG*KGQDGCRDIDR Trigger: CCTGTCAATGTCTCTACAGCCGTCCTGGCCCTTTCAACCTGACTTTCCAGCTGTTGCCAGGGATGTTGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 |
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| CDS CAA 72 bp | GCCACCGAGATGAAGAAAATGGGCTTCTCCCACGGTTaGCGATATCCATGTAGCTTCAGGGCCAATGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ATEMKKMGFSHG*RYPCSFRANGC Trigger: GCAGCCATTGGCCCTGAAGCTACATGGATATCGCAAACCGTGGGAGAAGCCCATTTTCTTCATCTCGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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| CDS CCA 72 bp | AGTCAGAATACCCGGATAGAGGCAGTGACAGAGTCGTaGTGTCAAGATGGAGACAGCAGCAACTACAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SQNTRIEAVTES*CQDGDSSNYRN Trigger: GTTCCTGTAGTTGCTGCTGTCTCCATCTTGACACCACGACTCTGTCACTGCCTCTATCCGGGTATTCTGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000094026.10 ENSMUST00000118755.8 ENSMUST00000141385.7 ENSMUST00000156152.3 |
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