Pregenerated sensors for PRSS35 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033491Ensembl transcript IDs: ENSMUST00000036426.13, ENSMUST00000179574.2
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGTTCCAGCAATGGTCAGGGTGGGTCAGGGTGACTTTCTTTGAATaGATACTCCTAGAACCCAGGAAGTGGGTGGGTGGAGGGATGTTG | + |
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Preference number: 1 (lower is better) Translates to: GFQQWSGWVRVTFFE*ILLEPRKWVGGGML Trigger: CAACATCCCTCCACCCACCCACTTCCTGGGTTCTAGGAGTATTCATTCAAAGAAAGTCACCCTGACCCACCCTGACCATTGCTGGAACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR TCA 90 bp | GAACCCAGGAAGTGGGTGGGTGGAGGGATGTTGCTATCTGTTTTATaGTTAGCATACCTTGGAGCATTGAGTCACAAAGACCACATTCCC | + |
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Preference number: 1 (lower is better) Translates to: EPRKWVGGGMLLSVL*LAYLGALSHKDHIP Trigger: GGGAATGTGGTCTTTGTGACTCAATGCTCCAAGGTATGCTAATCATAAAACAGATAGCAACATCCCTCCACCCACCCACTTCCTGGGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR CCA 90 bp | GCTGTAAAAACCACTGTTAGTCCAAGCCTATGCATAGCTCATGAGTaGTCTCTCAATGAGAGCTGGCTTTCTCTGGGATTCAAGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: AVKTTVSPSLCIAHE*SLNESWLSLGFKMC Trigger: GCACATCTTGAATCCCAGAGAAAGCCAGCTCTCATTGAGAGACCACTCATGAGCTATGCATAGGCTTGGACTAACAGTGGTTTTTACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR GCA 90 bp | TCGTGTTTATTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTaGTCTAGGACGGTACACAGTAACTGCTTAGTACTACTTGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SCLFMRCILNACCAF*SRTVHSNCLVLLGR Trigger: CCTCCCAAGTAGTACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAATAAACACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR CCA 90 bp | CTGAGTAAGGGGGTATTTAAAGGAAGAAACCACAACTCAAGGAGGTaGGAAAGGCGTTGTTGGAACATACCAAAAATACCAGTTAAGAGT | + |
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Preference number: 1 (lower is better) Translates to: LSKGVFKGRNHNSRR*ERRCWNIPKIPVKS Trigger: ACTCTTAACTGGTATTTTTGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAAATACCCCCTTACTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR CCA 90 bp | TTTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTaGAACATACCAAAAATACCAGTTAAGAGTCACAAGGAAGTGCAA | + |
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Preference number: 1 (lower is better) Translates to: FKGRNHNSRRWERRC*NIPKIPVKSHKEVQ Trigger: TTGCACTTCCTTGTGACTCTTAACTGGTATTTTTGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTATTCAAGAGCGCTCTTGGGCCCACGGTCATACACCACGCAGGGGTAGAGGACAACCCAGGAAGTGGGTaGGTGGAGGGATGTTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: LFKSALGPTVIHHAGVEDNPGSG*VEGCCY Trigger: ATAGCAACATCCCTCCACCCACCCACTTCCTGGGTT...GTCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGCTAGAACCCAGGAAGTaGGTGGGTGGAGGGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: LLGRQSKDVPLVPYESHQLEPRK*VGGGML Trigger: CAACATCCCTCCACCCACCCACTTCCTGGGTTCTAG...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGGAGGATGGTAGCTTGTaGAATGGCTTCTCTCTATGC | + |
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Preference number: 2 (lower is better) Translates to: LLGRQSKDVPLVPYESHQEDGSL*NGFSLC Trigger: GCATAGAGAGAAGCCATTTCACAAGCTACCATCCTC...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTCTAGAACCCAGGAAGTaGGTGGGTGGAGGGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: LVPYESHQNLLWYLRVGGLEPRK*VGGGML Trigger: CAACATCCCTCCACCCACCCACTTCCTGGGTTCTAG...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | ATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTAGGTGGGTTCTCTTATGAAGGACCCAGCTGGTGTTaGAAGACCCACAACGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: IRTFFGISGLGVGGFSYEGPSWC*KTHNVR Trigger: CCTCACGTTGTGGGTCTTTCAACACCAGCTGGGTCC...TTCATAAGAGAACCCACCTACCCCCAACCCTGAGATACCAAAGAAGGTTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036426.13 |
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| 3UTR-3UTR GCA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGCTGGGATTCAAGATGTaGATGAAGCTCGCTTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: LLGRQSKDVPLVPYESHQLGFKM*MKLASV Trigger: AACTGAAGCGAGCTTCATGCACATCTTGAATCCCAG...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | TTATTCAAGAGCGCTCTTGGGCCCACGGTCATACACCACGCAGGGGTAGAGGACATCACAGTTCTGGTTTaGTGTTTTAAAGAGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LFKSALGPTVIHHAGVEDITVLV*CFKECL Trigger: CAGACACTCTTTAAAACATCAAACCAGAACTGTGAT...GTCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCGACACCCCAAAATCACCCACAAGAAACGGTCTTGCTGCAAACTGCAAGACATACCTTGGAGCATTaGGTCACAAAGACCACATTC | + |
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Preference number: 2 (lower is better) Translates to: EATPQNHPQETVLLQTARHTLEH*VTKTTF Trigger: GAATGTGGTCTTTGTGACTCAATGCTCCAAGGTATG...TCTTGCAGTTTGCAGCAAGACCGTTTCTTGTGGGTGATTTTGGGGTGTCGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036426.13 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTAAGAGTCACAAGGAAGTaGAAAGTCACAAGTGTCACA | + |
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Preference number: 2 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVRVTRK*KVTSVT Trigger: TGTGACACTTGTGACTTTGCACTTCCTTGTGACTCT...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGTCGTGTTTATTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCCCCCTTGGTCCCTTATaGGAGCCATCAGAACCTTCT | + |
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Preference number: 2 (lower is better) Translates to: IVVFIHEVHPECLLCILLPLGPL*EPSEPS Trigger: AGAAGGTTCTGATGGCTCTCATAAGGGACCAAGGGG...GAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAATAAACACGACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTTCTCCAAATTCTAGATaGACCCAGCTGGTGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: LVPYESHQNLLWYLRVGGSPNSR*TQLVLK Trigger: TTTCAACACCAGCTGGGTCCATCTAGAATTTGGAGA...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACCACTGGGATTCAAGATGTaGATGAAGCTCGCTTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: KGRNHNSRRWERRCWNIPLGFKM*MKLASV Trigger: AACTGAAGCGAGCTTCATGCACATCTTGAATCCCAG...TGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCGACACCCCAAAATCACCCACAAGAAACGGTCTTGCTGCAAACTGCAAGAAGCATTTCATCACATTaGAAACTAAACCTCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: EATPQNHPQETVLLQTARSISSH*KLNLLS Trigger: AGACAGGAGGTTTAGTTTGCAATGTGATGAAATGCT...TCTTGCAGTTTGCAGCAAGACCGTTTCTTGTGGGTGATTTTGGGGTGTCGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036426.13 |
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| 3UTR-3UTR GCA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTAGGTCTTGCTGCAAACTaGAAGAGGATTTTTATTCAA | + |
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Preference number: 2 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVGLAAN*KRIFIQ Trigger: TTGAATAAAAATCCTCTTGCAGTTTGCAGCAAGACC...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACGCCCAAGTAAACAAATaGTTTCCCCCAAAACGAAAC | + |
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Preference number: 2 (lower is better) Translates to: FMRCILNACCAFCSRTVHAQVNK*FPPKRN Trigger: GTTTCGTTTTGGGGGAAACCATTTGTTTACTTGGGC...GTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGAACCTTCTTATGATTAGCATACCTTaGAGCATTGAGTCACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: RQSKDVPLVPYESHQNLLMISIP*SIESQR Trigger: TCTTTGTGACTCAATGCTCCAAGGTATGCTAATCAT...AAGAAGGTTCTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTATGATTAGCATACCTTaGAGCATTGAGTCACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LVPYESHQNLLWYLRVGGMISIP*SIESQR Trigger: TCTTTGTGACTCAATGCTCCAAGGTATGCTAATCAT...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAGTTAAGAGTCACAAGGAAGTGCAAAGTCACAAGTGTCACAAGGAATACCCATACCTTGGAGCATTaGGTCACAAAGACCACATTC | + |
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Preference number: 2 (lower is better) Translates to: YQLRVTRKCKVTSVTRNTHTLEH*VTKTTF Trigger: GAATGTGGTCTTTGTGACTCAATGCTCCAAGGTATG...GGTATTCCTTGTGACACTTGTGACTTTGCACTTCCTTGTGACTCTTAACTGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACACAAGGAATACCTGGTaGTTGTGTGGGTTATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LKEETTTQGGGKGVVGTYTRNTW*LCGLFL Trigger: GAGAAATAACCCACACAATCACCAGGTATTCCTTGT...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTAGCCCAAGTAAACAAATaGTTTCCCCCAAAACGAAAC | + |
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Preference number: 2 (lower is better) Translates to: LNACCAFCSRTVHSNCLVAQVNK*FPPKRN Trigger: GTTTCGTTTTGGGGGAAACCATTTGTTTACTTGGGC...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTGTCACATCACAGTTCTaGTTTGATGTTTTAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LVPYESHQNLLWYLRVGGVTSQF*FDVLKS Trigger: ACTCTTTAAAACATCAAACCAGAACTGTGATGTGAC...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCAGCTTTCAGTATCTGTAAACTTGGTTCGTTACATAGAACAAAGTGTTAACCCAGGAAGTGGGTaGGTGGAGGGATGTTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: VSQLSVSVNLVRYIEQSVNPGSG*VEGCCY Trigger: ATAGCAACATCCCTCCACCCACCCACTTCCTGGGTT...AACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTCAGCAATGGTCAGGGTaGGTCAGGGTGACTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: RFYPGNELSVGKYVALEIQQWSG*VRVTFF Trigger: AAAGAAAGTCACCCTGACCCACCCTGACCATTGCTG...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTCAGGGTGGGTCAGGGTaGCTTTCTTTGAATGAATAC | + |
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Preference number: 2 (lower is better) Translates to: RFYPGNELSVGKYVALEIQGGSG*LSLNEY Trigger: GTATTCATTCAAAGAAAGTCACCCTGACCCACCCTG...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR GCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTGAGGTGCATCCTGAATaGCTGTTGTGCATTTTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RFYPGNELSVGKYVALEIEVHPE*LLCILL Trigger: GAGCAAAATGCACAACAGGCATTCAGGATGCACCTC...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACGTTTTAAAGAGTGTCTaGTATTCCAAAAGGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: LKEETTTQGGGKGVVGTYVLKSV*YSKRPK Trigger: CTTGGGCCTTTTGGAATACCAGACACTCTTTAAAAC...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTATTGCTATCTGTTTTATaGTTAGCATACCTTGGAGCA | + |
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Preference number: 2 (lower is better) Translates to: LNACCAFCSRTVHSNCLVLLSVL*LAYLGA Trigger: TGCTCCAAGGTATGCTAATCATAAAACAGATAGCAA...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR GCA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACAGCATTTCATCACATTaGAAACTAAACCTCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: LKEETTTQGGGKGVVGTYSISSH*KLNLLS Trigger: AGACAGGAGGTTTAGTTTGCAATGTGATGAAATGCT...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTAGGTCTTGCTGCAAACTaGAAGAGGATTTTTATTCAA | + |
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Preference number: 2 (lower is better) Translates to: LNACCAFCSRTVHSNCLVGLAAN*KRIFIQ Trigger: TTGAATAAAAATCCTCTTGCAGTTTGCAGCAAGACC...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGTCGTGTTTATTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCTACCTGGTGATTGTGTaGGTTATTTCTCAAGACAGT | + |
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Preference number: 2 (lower is better) Translates to: IVVFIHEVHPECLLCILLYLVIV*VISQDS Trigger: ACTGTCTTGAGAAATAACCCACACAATCACCAGGTA...GAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAATAAACACGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR TCA 90 bp | TACCAGTTAAGAGTCACAAGGAAGTGCAAAGTCACAAGTGTCACAAGGAATACCATCACAGTTCTGGTTTaGTGTTTTAAAGAGTGTCTG | + |
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Preference number: 2 (lower is better) Translates to: YQLRVTRKCKVTSVTRNTITVLV*CFKECL Trigger: CAGACACTCTTTAAAACATCAAACCAGAACTGTGAT...GGTATTCCTTGTGACACTTGTGACTTTGCACTTCCTTGTGACTCTTAACTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTAAATGGCTTCTCTCTATaGCTTGAAAACTTCGTATTT | + |
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Preference number: 2 (lower is better) Translates to: LNACCAFCSRTVHSNCLVNGFSL*LENFVF Trigger: AAATACGAAGTTTTCAAGGCATAGAGAGAAGCCATT...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCAGCTTTCAGTATCTGTAAACTTGGTTCGTTACATAGAACAAAGTGTTTCTCCAAATTCTAGATaGACCCAGCTGGTGTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: VSQLSVSVNLVRYIEQSVSPNSR*TQLVLK Trigger: TTTCAACACCAGCTGGGTCCATCTAGAATTTGGAGA...AACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCTCAGCTTTCAGTATCTGTAAACTTGGTTCGTTACATAGAACAAAGTGTTGTTTTAAAGAGTGTCTaGTATTCCAAAAGGCCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VSQLSVSVNLVRYIEQSVVLKSV*YSKRPK Trigger: CTTGGGCCTTTTGGAATACCAGACACTCTTTAAAAC...AACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR TCA 72 bp | CCAGCAATGGTCAGGGTGGGTCAGGGTGACTTTCTTTaGATGAATACTCCTAGAACCCAGGAAGTGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: PAMVRVGQGDFL*MNTPRTQEVGG Trigger: CCCACCCACTTCCTGGGTTCTAGGAGTATTCATTCAAAGAAAGTCACCCTGACCCACCCTGACCATTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR TCA 72 bp | TGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATaGGAGCCATCAGAACCTTCTTTGGTATCTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: WEAEQGCPLGPL*EPSEPSLVSQG Trigger: ACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR CCA 72 bp | GCAAACTGCAAGAGGATTTTTATTCAAGAGCGCTCTTaGGCCCACGGTCATACACCACGCAGGGGTAGAGGA | + |
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Preference number: 3 (lower is better) Translates to: ANCKRIFIQERS*AHGHTPRRGRG Trigger: TCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAAAAATCCTCTTGCAGTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR-3UTR CAA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTATGGACCCAGCTGGTGTaGAAAGACCCACAAGAAACG | + |
|
Preference number: 3 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVWTQLV*KDPQET Trigger: CGTTTCTTGTGGGTCTTTCAACACCAGCTGGGTCCA...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179574.2 |
||
| 3UTR TCA 72 bp | CAATGGTCAGGGTGGGTCAGGGTGACTTTCTTTGAATaGATACTCCTAGAACCCAGGAAGTGGGTGGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QWSGWVRVTFFE*ILLEPRKWVGG Trigger: TCCACCCACCCACTTCCTGGGTTCTAGGAGTATTCATTCAAAGAAAGTCACCCTGACCCACCCTGACCATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR CCA 72 bp | CCCTTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTaGTATCTCAGGGTTGGGGGTAGGTGGGTTCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PLVPYESHQNLL*YLRVGGRWVLL Trigger: TAAGAGAACCCACCTACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTAGTGGGAAAGGCGTTGTaGGAACATACCAAAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVVGKAL*EHTKNT Trigger: GGTATTTTTGGTATGTTCCAACAACGCCTTTCCCAC...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR CCA 72 bp | ACCACTGTTAGTCCAAGCCTATGCATAGCTCATGAGTaGTCTCTCAATGAGAGCTGGCTTTCTCTGGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: TTVSPSLCIAHE*SLNESWLSLGF Trigger: GAATCCCAGAGAAAGCCAGCTCTCATTGAGAGACCACTCATGAGCTATGCATAGGCTTGGACTAACAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTACTACTTGGGAGGCAGAGCGTGGGAAAGGCGTTGTaGGAACATACCAAAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: FCSRTVHSNCLVLLGRQSVGKAL*EHTKNT Trigger: GGTATTTTTGGTATGTTCCAACAACGCCTTTCCCAC...GCTCTGCCTCCCAAGTAGTACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGTCGTGTTTATTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCCCACAAGAAACGGTCTaGCTGCAAACTGCAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: IVVFIHEVHPECLLCILLPQETV*LQTARG Trigger: TCCTCTTGCAGTTTGCAGCAAGACCGTTTCTTGTGG...GAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAATAAACACGACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGAACCTTCTTGCTTCTCTCTATGCCTaGAAAACTTCGTATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: RQSKDVPLVPYESHQNLLASLYA*KTSYFK Trigger: CTTAAAATACGAAGTTTTCAAGGCATAGAGAGAAGC...AAGAAGGTTCTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR TCA 72 bp | AAAAGGGCATGGCTTTCGCCAGAGGATGGTAGCTTGTaGAATGGCTTCTCTCTATGCCTTGAAAACTTCGTA | + |
|
Preference number: 3 (lower is better) Translates to: KRAWLSPEDGSL*NGFSLCLENFV Trigger: TACGAAGTTTTCAAGGCATAGAGAGAAGCCATTTCACAAGCTACCATCCTCTGGCGAAAGCCATGCCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR GCA 72 bp | TTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTaGTCTAGGACGGTACACAGTAACTGCTTAGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: FMRCILNACCAF*SRTVHSNCLVL Trigger: TAGTACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACGCTTCTCTCTATGCCTaGAAAACTTCGTATTTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: FMRCILNACCAFCSRTVHASLYA*KTSYFK Trigger: CTTAAAATACGAAGTTTTCAAGGCATAGAGAGAAGC...GTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR CCA 72 bp | AGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTaGAACATACCAAAAATACCAGTTAAGAGTCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: RNHNSRRWERRC*NIPKIPVKSHK Trigger: CTTGTGACTCTTAACTGGTATTTTTGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR CCA 72 bp | GGGGTATTTAAAGGAAGAAACCACAACTCAAGGAGGTaGGAAAGGCGTTGTTGGAACATACCAAAAATACCA | + |
|
Preference number: 3 (lower is better) Translates to: GVFKGRNHNSRR*ERRCWNIPKIP Trigger: TGGTATTTTTGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAAATACCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR TCA 72 bp | GCTAGTCCATTGAGAAGTCACATCACAGTTCTGGTTTaGTGTTTTAAAGAGTGTCTGGTATTCCAAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: ASPLRSHITVLV*CFKECLVFQKA Trigger: GGCCTTTTGGAATACCAGACACTCTTTAAAACATCAAACCAGAACTGTGATGTGACTTCTCAATGGACTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| 3UTR TCA 72 bp | AAGTGCAAAGTCACAAGTGTCACAAGGAATACCTGGTaGTTGTGTGGGTTATTTCTCAAGACAGTTTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: KCKVTSVTRNTW*LCGLFLKTVSK Trigger: CTTAGAAACTGTCTTGAGAAATAACCCACACAATCACCAGGTATTCCTTGTGACACTTGTGACTTTGCACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TTATTCAAGAGCGCTCTTGGGCCCACGGTCATACACCACGCAGGGGTAGAGGACCCATCGTGGACACAGTaGGCAGCTGTGAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: LFKSALGPTVIHHAGVEDPSWTQ*AAVSTW Trigger: CCATGTGCTCACAGCTGCCCACTGTGTCCACGATGG...GTCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGGTGCTGTTGCTTGTGTaGGCGCTTCAGCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGRQSKDVPLVPYESHQVLLLV*ALQLQE Trigger: CTCCTGGAGCTGAAGCGCGCACACAAGCAACAGCAC...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR GCA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGACTCCCAGCTCCATGTaGTGTTGCTTGTGTGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGRQSKDVPLVPYESHQTPSSM*CCLCAR Trigger: GCGCGCACACAAGCAACAGCACATGGAGCTGGGAGT...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TTATTCAAGAGCGCTCTTGGGCCCACGGTCATACACCACGCAGGGGTAGAGGACTTGACGCGGGTCCATTaGAAGGAAGGCCTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LFKSALGPTVIHHAGVEDLTRVH*KEGLPW Trigger: CCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAA...GTCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | AGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGAACCTTCTTCCAACTGGGAAAGGCTaGGAGCCGGGAGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RQSKDVPLVPYESHQNLLPTGKG*EPGALP Trigger: AGGAAGAGCTCCCGGCTCCCAGCCTTTCCCAGTTGG...AAGAAGGTTCTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGAGCCGTAAGCACAGTTaGCAGCGTTTCCGTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGRQSKDVPLVPYESHQSRKHS*QRFRGS Trigger: GGATCCACGGAAACGCTGCCAACTGTGCTTACGGCT...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTACACAGTGGGCAGCTGTaGGCACATGGTTGGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVHSGQL*AHGWGK Trigger: TTTCCCCCAACCATGTGCTCACAGCTGCCCACTGTG...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTGCCGGGAGCTCTTCCTaGCATTCGATGCCACACACT | + |
|
Preference number: 4 (lower is better) Translates to: LVPYESHQNLLWYLRVGGAGSSS*HSMPHT Trigger: AGTGTGTGGCATCGAATGTCAGGAAGAGCTCCCGGC...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR GCA 90 bp | TTATTCAAGAGCGCTCTTGGGCCCACGGTCATACACCACGCAGGGGTAGAGGACTGGTTAAGGTTCGGGTaGCATTCTCGAAGATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LFKSALGPTVIHHAGVEDWLRFG*HSRRWS Trigger: AGACCATCTTCGAGAATGGCACCCGAACCTTAACCA...GTCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TTATTCAAGAGCGCTCTTGGGCCCACGGTCATACACCACGCAGGGGTAGAGGACCTTGAACTTTCACCCTaGTTAAGGTTCGGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFKSALGPTVIHHAGVEDLELSP*LRFGCH Trigger: ATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAG...GTCCTCTACCCCTGCGTGGTGTATGACCGTGGGCCCAAGAGCGCTCTTGAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTATTGACGCGGGTCCATTaGAAGGAAGGCCTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVLTRVH*KEGLPW Trigger: CCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAA...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | TTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACCACAGTGGGCAGCTGTaGGCACATGGTTGGGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FMRCILNACCAFCSRTVHHSGQL*AHGWGK Trigger: TTTCCCCCAACCATGTGCTCACAGCTGCCCACTGTG...GTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCGACACCCCAAAATCACCCACAAGAAACGGTCTTGCTGCAAACTGCAAGATTGGCAGCGTTTCCGTaGATCCAGAGGCAAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EATPQNHPQETVLLQTARLAAFP*IQRQIW Trigger: CCAGATTTGCCTCTGGATCCACGGAAACGCTGCCAA...TCTTGCAGTTTGCAGCAAGACCGTTTCTTGTGGGTGATTTTGGGGTGTCGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036426.13 |
||
| CDS-3UTR GCA 90 bp | CCTCACGGCAGAAAGTACAACACAAAAGGGCATGGCTTTCGCCAGAGGATGGTATTGACCAGCACTCTCTaGTTCTCTCCGGCTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHGRKYNTKGHGFRQRMVLTSTL*FSPAPF Trigger: AAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAA...TACCATCCTCTGGCGAAAGCCATGCCCTTTTGTGTTGTACTTTCTGCCGTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACCACGATGCCACACACTGTaGCCTTCACCACCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGRNHNSRRWERRCWNIPRCHTL*PSPPQH Trigger: ATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCG...TGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTACCAACTGGGAAAGGCTaGGAGCCGGGAGCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LNACCAFCSRTVHSNCLVPTGKG*EPGALP Trigger: AGGAAGAGCTCCCGGCTCCCAGCCTTTCCCAGTTGG...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTAGGTGGGTTCTCTTATGAACCATCGTGGACACAGTaGGCAGCTGTGAGCACATGG | + |
|
Preference number: 4 (lower is better) Translates to: IRTFFGISGLGVGGFSYEPSWTQ*AAVSTW Trigger: CCATGTGCTCACAGCTGCCCACTGTGTCCACGATGG...TTCATAAGAGAACCCACCTACCCCCAACCCTGAGATACCAAAGAAGGTTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTAGCCGGGAGCTCTTCCTaGCATTCGATGCCACACACT | + |
|
Preference number: 4 (lower is better) Translates to: LNACCAFCSRTVHSNCLVAGSSS*HSMPHT Trigger: AGTGTGTGGCATCGAATGTCAGGAAGAGCTCCCGGC...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTCGTGTTTATTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCAAGGCCTTCCTTGGGTaGCTCTTGGACCACGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IVVFIHEVHPECLLCILLKAFLG*LLDHAW Trigger: CCAGGCGTGGTCCAAGAGTCACCCAAGGAAGGCCTT...GAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAATAAACACGACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACCAGCAGCTGTGAGCACATaGTTGGGGGAAACGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KGRNHNSRRWERRCWNIPAAVST*LGETRV Trigger: TACCCTCGTTTCCCCCAACCATGTGCTCACAGCTGC...TGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACCAAAGGAAGGCCTTCCTTaGGTGACTCTTGGACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: KGRNHNSRRWERRCWNIPKEGLP*VTLGPR Trigger: GCGTGGTCCAAGAGTCACCCAAGGAAGGCCTTCCTT...TGGTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACCAGCCTTTGGGAATGTaGGTGCTCTTGACGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LKEETTTQGGGKGVVGTYQPLGM*VLLTRV Trigger: GACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTG...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTACTACTTGGGAGGCAGAGCTTGGCAGCGTTTCCGTaGATCCAGAGGCAAATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCSRTVHSNCLVLLGRQSLAAFP*IQRQIW Trigger: CCAGATTTGCCTCTGGATCCACGGAAACGCTGCCAA...GCTCTGCCTCCCAAGTAGTACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR GCA 90 bp | ATAGTCGTGTTTATTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCACTCCCAGCTCCATGTaGTGTTGCTTGTGTGCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: IVVFIHEVHPECLLCILLTPSSM*CCLCAR Trigger: GCGCGCACACAAGCAACAGCACATGGAGCTGGGAGT...GAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAATAAACACGACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACAAGGAAGGCCTTCCTTaGGTGACTCTTGGACCACGC | + |
|
Preference number: 4 (lower is better) Translates to: LKEETTTQGGGKGVVGTYKEGLP*VTLGPR Trigger: GCGTGGTCCAAGAGTCACCCAAGGAAGGCCTTCCTT...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | TACCAGTTAAGAGTCACAAGGAAGTGCAAAGTCACAAGTGTCACAAGGAATACCCAGCCTTTGGGAATGTaGGTGCTCTTGACGCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YQLRVTRKCKVTSVTRNTQPLGM*VLLTRV Trigger: GACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTG...GGTATTCCTTGTGACACTTGTGACTTTGCACTTCCTTGTGACTCTTAACTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | ATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTAGGTGGGTTCTCTTATGAATGCTCAAGTGCCACGTaGAGTCTAGTTCTGTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IRTFFGISGLGVGGFSYECSSAT*SLVLFP Trigger: CGGAAACAGAACTAGACTTCACGTGGCACTTGAGCA...TTCATAAGAGAACCCACCTACCCCCAACCCTGAGATACCAAAGAAGGTTCTGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTAAGGCCTTCCTTGGGTaGCTCTTGGACCACGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFYPGNELSVGKYVALEIKAFLG*LLDHAW Trigger: CCAGGCGTGGTCCAAGAGTCACCCAAGGAAGGCCTT...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTAATCCAGAGGCAAATCTaGGCGTACTTGAGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LNACCAFCSRTVHSNCLVIQRQI*AYLSGV Trigger: CACTCCGCTCAAGTACGCCCAGATTTGCCTCTGGAT...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR GCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTGTGCTGTTGCTTGTGTaGGCGCTTCAGCTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RFYPGNELSVGKYVALEIVLLLV*ALQLQE Trigger: CTCCTGGAGCTGAAGCGCGCACACAAGCAACAGCAC...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTCGATGCCACACACTGTaGCCTTCACCACCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RFYPGNELSVGKYVALEIRCHTL*PSPPQH Trigger: ATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCG...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CCA 90 bp | ATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTAGGTGGGTTCTCTTATGAACTTGAACTTTCACCCTaGTTAAGGTTCGGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRTFFGISGLGVGGFSYELELSP*LRFGCH Trigger: ATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAG...TTCATAAGAGAACCCACCTACCCCCAACCCTGAGATACCAAAGAAGGTTCTGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTGCAGCTGTGAGCACATaGTTGGGGGAAACGAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RFYPGNELSVGKYVALEIAAVST*LGETRV Trigger: TACCCTCGTTTCCCCCAACCATGTGCTCACAGCTGC...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR TCA 90 bp | GTGTCACAAGGAATACCTGGTGATTGTGTGGGTTATTTCTCAAGACAGTTTCTATCCAGGACCAGACCTTaGACTTTCACCCTGGTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSQGIPGDCVGYFSRQFLSRTRP*TFTLVK Trigger: CTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGA...TAGAAACTGTCTTGAGAAATAACCCACACAATCACCAGGTATTCCTTGTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR TCA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACGCTTTTTACTGCCTTTaGCATAGTCCTTCCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKEETTTQGGGKGVVGTYAFYCL*HSPSHR Trigger: ACGATGGGAAGGACTATGTCAAAGGCAGTAAAAAGC...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR GCA 90 bp | GTGTCACAAGGAATACCTGGTGATTGTGTGGGTTATTTCTCAAGACAGTTTCTACCTTCTCCTAGGGTGTaGTCCTTTTACGCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSQGIPGDCVGYFSRQFLPSPRV*SFYAAV Trigger: AACAGCAGCGTAAAAGGAGCACACCCTAGGAGAAGG...TAGAAACTGTCTTGAGAAATAACCCACACAATCACCAGGTATTCCTTGTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR TCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTTGCTCAAGTGCCACGTaGAGTCTAGTTCTGTTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFYPGNELSVGKYVALEICSSAT*SLVLFP Trigger: CGGAAACAGAACTAGACTTCACGTGGCACTTGAGCA...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CCA 90 bp | GGTTTCCCCCAAAACGAAACTTATCACCATATAAAGAATATATACTTGTCGCTGATCCAGAGGCAAATCTaGGCGTACTTGAGCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPQNETYHHIKNIYLSLIQRQI*AYLSGV Trigger: CACTCCGCTCAAGTACGCCCAGATTTGCCTCTGGAT...CAGCGACAAGTATATATTCTTTATATGGTGATAAGTTTCGTTTTGGGGGAAACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR GCA 90 bp | GGTTTCCCCCAAAACGAAACTTATCACCATATAAAGAATATATACTTGTCGCTGCCTTCTCCTAGGGTGTaGTCCTTTTACGCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GFPQNETYHHIKNIYLSLPSPRV*SFYAAV Trigger: AACAGCAGCGTAAAAGGAGCACACCCTAGGAGAAGG...CAGCGACAAGTATATATTCTTTATATGGTGATAAGTTTCGTTTTGGGGGAAACC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CCA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTGATACAGGAGGTCATTaGATTCCTCAGAAACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RFYPGNELSVGKYVALEIDTGGH*IPQKRC Trigger: GCAGCGTTTCTGAGGAATCCAATGACCTCCTGTATC...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTCAGCTTTCAGTATCTGTAAACTTGGTTCGTTACATAGAACAAAGTGTTTGGTTAAGGTTCGGGTaGCATTCTCGAAGATGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSQLSVSVNLVRYIEQSVWLRFG*HSRRWS Trigger: AGACCATCTTCGAGAATGGCACCCGAACCTTAACCA...AACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CCA 90 bp | GGTTTCCCCCAAAACGAAACTTATCACCATATAAAGAATATATACTTGTCGCTGGATACAGGAGGTCATTaGATTCCTCAGAAACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPQNETYHHIKNIYLSLDTGGH*IPQKRC Trigger: GCAGCGTTTCTGAGGAATCCAATGACCTCCTGTATC...CAGCGACAAGTATATATTCTTTATATGGTGATAAGTTTCGTTTTGGGGGAAACC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR TCA 90 bp | GGTTTCCCCCAAAACGAAACTTATCACCATATAAAGAATATATACTTGTCGCTGGCTTTTTACTGCCTTTaGCATAGTCCTTCCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: GFPQNETYHHIKNIYLSLAFYCL*HSPSHR Trigger: ACGATGGGAAGGACTATGTCAAAGGCAGTAAAAAGC...CAGCGACAAGTATATATTCTTTATATGGTGATAAGTTTCGTTTTGGGGGAAACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CCA 90 bp | GTGTCTCAGCTTTCAGTATCTGTAAACTTGGTTCGTTACATAGAACAAAGTGTTTGCCATTCTCGAAGATaGTCTCATAGGATAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VSQLSVSVNLVRYIEQSVCHSRR*SHRIGT Trigger: AGTCCCTATCCTATGAGACCATCTTCGAGAATGGCA...AACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR CAA 72 bp | TTTAACAACCCACATTATGAAAGAACGCCACACGTTTaGAGGACCATTTACAGAGTCATTATGATACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FNNPHYERTPHV*RTIYRVIMIPS Trigger: ACTGGGTATCATAATGACTCTGTAAATGGTCCTCAAAACGTGTGGCGTTCTTTCATAATGTGGGTTGTTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036426.13 |
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| 3UTR CAA 72 bp | GACCTTAGAGTGTCTCAGCTTTCAGTATCTGTAAACTaGGTTCGTTACATAGAACAAAGTGTTTCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DLRVSQLSVSVN*VRYIEQSVSPN Trigger: ATTTGGAGAAACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACACTCTAAGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| 3UTR CAA 72 bp | TACAGAGTCATTATGATACCCAGTGAAGATGCTCCTTaGCATACTAATCAAGACTGTAACAGAAAGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRVIMIPSEDAP*HTNQDCNRKQK Trigger: TTTTTGCTTTCTGTTACAGTCTTGATTAGTATGCAAAGGAGCATCTTCACTGGGTATCATAATGACTCTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036426.13 |
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| CDS CCA 90 bp | GGCTGGGAGCCGGGAGCTCTTCCTGACATTCGATGCCACACACTGTaGCCTTCACCACCCCAGCATCCGCCTGGAACGTGGGGCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GWEPGALPDIRCHTL*PSPPQHPPGTWGWQ Trigger: TTGCCAGCCCCACGTTCCAGGCGGATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCGAATGTCAGGAAGAGCTCCCGGCTCCCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | AAGGCCAGGCCCCCATTCTCTCCCCTCACCCAGCCTTTGGGAATGTaGGTGCTCTTGACGCGGGTCCATTGGAAGGAAGGCCTTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KARPPFSPLTQPLGM*VLLTRVHWKEGLPW Trigger: CCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTGGGTGAGGGGAGAGAATGGGGGCCTGGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS TCA 90 bp | AGGGACTCTTCCAACTGGGAAAGGCTGGGAGCCGGGAGCTCTTCCTaGCATTCGATGCCACACACTGTGGCCTTCACCACCCCAGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RDSSNWERLGAGSSS*HSMPHTVAFTTPAS Trigger: GGATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCGAATGTCAGGAAGAGCTCCCGGCTCCCAGCCTTTCCCAGTTGGAAGAGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | CTCACCCAGCCTTTGGGAATGTGGGTGCTCTTGACGCGGGTCCATTaGAAGGAAGGCCTTCCTTGGGTGACTCTTGGACCACGCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LTQPLGMWVLLTRVH*KEGLPWVTLGPRLD Trigger: ATCCAGGCGTGGTCCAAGAGTCACCCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTGGGTGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 90 bp | GGTGGTGCTCTCCCGAAGATGCGCCTGACTTTGACCAGCACTCTCTaGTTCTCTCCGGCTCCTTTTGGAACCTCTGCGTTTCTTGCGACC | + |
|
Preference number: 5 (lower is better) Translates to: GGALPKMRLTLTSTL*FSPAPFGTSAFLAT Trigger: GGTCGCAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAAAGTCAGGCGCATCTTCGGGAGAGCACCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | CATTCGATGCCACACACTGTGGCCTTCACCACCCCAGCATCCGCCTaGAACGTGGGGCTGGCAAGATGGATAGTGTTCTCACTCACAACC | + |
|
Preference number: 5 (lower is better) Translates to: HSMPHTVAFTTPASA*NVGLARWIVFSLTT Trigger: GGTTGTGAGTGAGAACACTATCCATCTTGCCAGCCCCACGTTCCAGGCGGATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCGAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 90 bp | GCCTGGTTCTTTGAGCCTCAGGTAGATCCCCGAGCCTGTGGAGCCTaGCTCAGCATCGCAATACTGATACAGGAGGTCATTGGATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AWFFEPQVDPRACGA*LSIAILIQEVIGFL Trigger: GAGGAATCCAATGACCTCCTGTATCAGTATTGCGATGCTGAGGCAGGCTCCACAGGCTCGGGGATCTACCTGAGGCTCAAAGAACCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | CGAAGATGGTCTCATAGGATAGGGACTCTTCCAACTGGGAAAGGCTaGGAGCCGGGAGCTCTTCCTGACATTCGATGCCACACACTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRWSHRIGTLPTGKG*EPGALPDIRCHTLW Trigger: CCACAGTGTGTGGCATCGAATGTCAGGAAGAGCTCCCGGCTCCCAGCCTTTCCCAGTTGGAAGAGTCCCTATCCTATGAGACCATCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS TCA 90 bp | GCTCCTTTTACGCTGCTGTTCCGAGTGGGTTCCAGGACCAGACCTTaGACTTTCACCCTGGTTAAGGTTCGGGTGCCATTCTCGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: APFTLLFRVGSRTRP*TFTLVKVRVPFSKM Trigger: CATCTTCGAGAATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGAACCCACTCGGAACAGCAGCGTAAAAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTCTTGACGCGGGTCCATaGGAAGGAAGGCCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPYESHQNLLWYLRVGGLDAGP*EGRPSL Trigger: CAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAG...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | GCGCCTGACTTTGACCAGCACTCTCTGCTTCTCTCCGGCTCCTTTTaGAACCTCTGCGTTTCTTGCGACCTCCTTTGTTTCTCATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: APDFDQHSLLLSGSF*NLCVSCDLLCFSSS Trigger: TGAAGATGAGAAACAAAGGAGGTCGCAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAAAGTCAGGCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | TTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACGGAATGTGGGTGCTCTaGACGCGGGTCCATTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: FMRCILNACCAFCSRTVHGMWVL*TRVHWK Trigger: CTTCCAATGGACCCGCGTCAAGAGCACCCACATTCC...GTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | GTGTCACAAGGAATACCTGGTGATTGTGTGGGTTATTTCTCAAGACAGTTTCTACGGCCTCCCGGCAGCTaGGTGATGGTGGGGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VSQGIPGDCVGYFSRQFLRPPGS*VMVGLT Trigger: AGTCAGCCCCACCATCACCAAGCTGCCGGGAGGCCG...TAGAAACTGTCTTGAGAAATAACCCACACAATCACCAGGTATTCCTTGTGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 90 bp | AGATGGATAGTGTTCTCACTCACAACCTGGGGTATTCTGCTCAAGTaGCACGTGAAGTCTAGTTCTGTTTCCGACCCATCAGAGAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RWIVFSLTTWGILLK*HVKSSSVSDPSERA Trigger: GGCCCTCTCTGATGGGTCGGAAACAGAACTAGACTTCACGTGGCACTTGAGCAGAATACCCCAGGTTGTGAGTGAGAACACTATCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 90 bp | AACCTTTTGTCTAAGATGCTGAACCTGCTGTCCGTACCATACACCTaGCTCCTTCTCCTAGGGTGTGCTCCTTTTACGCTGCTGTTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: NLLSKMLNLLSVPYT*LLLLGCAPFTLLFR Trigger: TCGGAACAGCAGCGTAAAAGGAGCACACCCTAGGAGAAGGAGGCAGGTGTATGGTACGGACAGCAGGTTCAGCATCTTAGACAAAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | TGGAACGTGGGGCTGGCAAGATGGATAGTGTTCTCACTCACAACCTaGGGTATTCTGCTCAAGTGCCACGTGAAGTCTAGTTCTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WNVGLARWIVFSLTT*GILLKCHVKSSSVS Trigger: GGAAACAGAACTAGACTTCACGTGGCACTTGAGCAGAATACCCCAGGTTGTGAGTGAGAACACTATCCATCTTGCCAGCCCCACGTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 90 bp | TGCTGTTCCGAGTGGGTTCCAGGACCAGACCTTGAACTTTCACCCTaGTTAAGGTTCGGGTGCCATTCTCGAAGATGGTCTCATAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CCSEWVPGPDLELSP*LRFGCHSRRWSHRI Trigger: TATCCTATGAGACCATCTTCGAGAATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGAACCCACTCGGAACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | CTACTTGGGAGGCAGAGCAAGGATGTCCCCTTGGTCCCTTATGAGAGCCATCAGTTCTTGCGACCTCCTTaGTTTCTCATCTTCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LLGRQSKDVPLVPYESHQFLRPP*FLIFST Trigger: AGTGCTGAAGATGAGAAACAAAGGAGGTCGCAAGAA...CTGATGGCTCTCATAAGGGACCAAGGGGACATCCTTGCTCTGCCTCCCAAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCCCTTATGAGAGCCATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTTCTCTCCGGCTCCTTTaGGAACCTCTGCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LVPYESHQNLLWYLRVGGSLRLL*EPLRFL Trigger: CAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGA...ACCCCCAACCCTGAGATACCAAAGAAGGTTCTGATGGCTCTCATAAGGGACCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | ATCAGAACCTTCTTTGGTATCTCAGGGTTGGGGGTAGGTGGGTTCTCTTATGAACTTGACGCGGGTCCATaGGAAGGAAGGCCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRTFFGISGLGVGGFSYELDAGP*EGRPSL Trigger: CAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAG...TTCATAAGAGAACCCACCTACCCCCAACCCTGAGATACCAAAGAAGGTTCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 90 bp | GTTCCAGGACCAGACCTTGAACTTTCACCCTGGTTAAGGTTCGGGTaGCATTCTCGAAGATGGTCTCATAGGATAGGGACTCTTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: VPGPDLELSPWLRFG*HSRRWSHRIGTLPT Trigger: AGTTGGAAGAGTCCCTATCCTATGAGACCATCTTCGAGAATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | TACCAGTTAAGAGTCACAAGGAAGTGCAAAGTCACAAGTGTCACAAGGAATACCGCTGTGAGCACATGGTaGGGGGAAACGAGGGTACCG | + |
|
Preference number: 5 (lower is better) Translates to: YQLRVTRKCKVTSVTRNTAVSTW*GETRVP Trigger: CGGTACCCTCGTTTCCCCCAACCATGTGCTCACAGC...GGTATTCCTTGTGACACTTGTGACTTTGCACTTCCTTGTGACTCTTAACTGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACGGAATGTGGGTGCTCTaGACGCGGGTCCATTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LKEETTTQGGGKGVVGTYGMWVL*TRVHWK Trigger: CTTCCAATGGACCCGCGTCAAGAGCACCCACATTCC...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTCAGCTTTCAGTATCTGTAAACTTGGTTCGTTACATAGAACAAAGTGTTCGGCCTCCCGGCAGCTaGGTGATGGTGGGGCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: VSQLSVSVNLVRYIEQSVRPPGS*VMVGLT Trigger: AGTCAGCCCCACCATCACCAAGCTGCCGGGAGGCCG...AACACTTTGTTCTATGTAACGAACCAAGTTTACAGATACTGAAAGCTGAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS CCA 90 bp | CTGTGGAGCCTGCCTCAGCATCGCAATACTGATACAGGAGGTCATTaGATTCCTCAGAAACGCTGCAAAACCGATACACCAACTGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LWSLPQHRNTDTGGH*IPQKRCKTDTPTVH Trigger: ATGAACAGTTGGTGTATCGGTTTTGCAGCGTTTCTGAGGAATCCAATGACCTCCTGTATCAGTATTGCGATGCTGAGGCAGGCTCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
||
| CDS-3UTR CAA 90 bp | TTCATGAGGTGCATCCTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACTTGGTCGCGAACCTTTaGTCTAAGATGCTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: FMRCILNACCAFCSRTVHLVANL*SKMLNL Trigger: CAGGTTCAGCATCTTAGACAAAAGGTTCGCGACCAA...GTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAGGATGCACCTCATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | CTGAATGCCTGTTGTGCATTTTGCTCTAGGACGGTACACAGTAACTGCTTAGTATCTCTCCGGCTCCTTTaGGAACCTCTGCGTTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LNACCAFCSRTVHSNCLVSLRLL*EPLRFL Trigger: CAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGA...TACTAAGCAGTTACTGTGTACCGTCCTAGAGCAAAATGCACAACAGGCATTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 90 bp | CATCGCAATACTGATACAGGAGGTCATTGGATTCCTCAGAAACGCTaGAAAACCGATACACCAACTGTTCATCCCTGTCGTTGTCAAATC | + |
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Preference number: 5 (lower is better) Translates to: HRNTDTGGHWIPQKR*KTDTPTVHPCRCQI Trigger: GATTTGACAACGACAGGGATGAACAGTTGGTGTATCGGTTTTGCAGCGTTTCTGAGGAATCCAATGACCTCCTGTATCAGTATTGCGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | GTGTCACAAGGAATACCTGGTGATTGTGTGGGTTATTTCTCAAGACAGTTTCTATTGGTCGCGAACCTTTaGTCTAAGATGCTGAACCTG | + |
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Preference number: 5 (lower is better) Translates to: VSQGIPGDCVGYFSRQFLLVANL*SKMLNL Trigger: CAGGTTCAGCATCTTAGACAAAAGGTTCGCGACCAA...TAGAAACTGTCTTGAGAAATAACCCACACAATCACCAGGTATTCCTTGTGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | TTAAAGGAAGAAACCACAACTCAAGGAGGTGGGAAAGGCGTTGTTGGAACATACGTATTAAAAGGGAAATaGGTCGCGAACCTTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LKEETTTQGGGKGVVGTYVLKGK*VANLLS Trigger: AGACAAAAGGTTCGCGACCAATTTCCCTTTTAATAC...GTATGTTCCAACAACGCCTTTCCCACCTCCTTGAGTTGTGGTTTCTTCCTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | TACCAGTTAAGAGTCACAAGGAAGTGCAAAGTCACAAGTGTCACAAGGAATACCGTATTAAAAGGGAAATaGGTCGCGAACCTTTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: YQLRVTRKCKVTSVTRNTVLKGK*VANLLS Trigger: AGACAAAAGGTTCGCGACCAATTTCCCTTTTAATAC...GGTATTCCTTGTGACACTTGTGACTTTGCACTTCCTTGTGACTCTTAACTGGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS-3UTR CAA 90 bp | AGGTTTTACCCTGGCAATGAATTGAGTGTGGGAAAATATGTGGCCTTAGAAATTTTCTTGCGACCTCCTTaGTTTCTCATCTTCAGCACT | + |
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Preference number: 5 (lower is better) Translates to: RFYPGNELSVGKYVALEIFLRPP*FLIFST Trigger: AGTGCTGAAGATGAGAAACAAAGGAGGTCGCAAGAA...AATTTCTAAGGCCACATATTTTCCCACACTCAATTCATTGCCAGGGTAAAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | CCGGGAGCTCTTCCTGACATTCGATGCCACACACTGTaGCCTTCACCACCCCAGCATCCGCCTGGAACGTGG | + |
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Preference number: 6 (lower is better) Translates to: PGALPDIRCHTL*PSPPQHPPGTW Trigger: CCACGTTCCAGGCGGATGCTGGGGTGGTGAAGGCCACAGTGTGTGGCATCGAATGTCAGGAAGAGCTCCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS TCA 72 bp | CTCCCCTCACCCAGCCTTTGGGAATGTGGGTGCTCTTaGCGCGGGTCCATTGGAAGGAAGGCCTTCCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LPSPSLWECGCS*RGSIGRKAFLG Trigger: CCCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTGGGTGAGGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 72 bp | AGCTTGGTGATGGTGGGGCTGACTCCCAGCTCCATGTaGTGTTGCTTGTGTGCGCGCTTCAGCTCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SLVMVGLTPSSM*CCLCARFSSRS Trigger: GCTCCTGGAGCTGAAGCGCGCACACAAGCAACAGCACATGGAGCTGGGAGTCAGCCCCACCATCACCAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 90 bp | CCTCACCCAGCCTTTGGGAATGTGGGTGCTCTTGACGCGGGTCCATaGGAAGGAAGGCCTTCCTTGGGTGACTCTTGGACCACGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: PHPAFGNVGALDAGP*EGRPSLGDSWTTPG Trigger: TCCAGGCGTGGTCCAAGAGTCACCCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTGGGTGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | CCACACACTGTGGCCTTCACCACCCCAGCATCCGCCTaGAACGTGGGGCTGGCAAGATGGATAGTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PHTVAFTTPASA*NVGLARWIVFS Trigger: TGAGAACACTATCCATCTTGCCAGCCCCACGTTCCAGGCGGATGCTGGGGTGGTGAAGGCCACAGTGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | CAGTTGGCAGCGTTTCCGTGGATCCAGAGGCAAATCTaGGCGTACTTGAGCGGAGTGATGCGCACAGCCACG | + |
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Preference number: 6 (lower is better) Translates to: QLAAFPWIQRQI*AYLSGVMRTAT Trigger: CGTGGCTGTGCGCATCACTCCGCTCAAGTACGCCCAGATTTGCCTCTGGATCCACGGAAACGCTGCCAACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 72 bp | TCTCCCCTCACCCAGCCTTTGGGAATGTGGGTGCTCTaGACGCGGGTCCATTGGAAGGAAGGCCTTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: SPLTQPLGMWVL*TRVHWKEGLPW Trigger: CCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTGGGTGAGGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 90 bp | CCCCCATTCTCTCCCCTCACCCAGCCTTTGGGAATGTGGGTGCTCTaGACGCGGGTCCATTGGAAGGAAGGCCTTCCTTGGGTGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: PPFSPLTQPLGMWVL*TRVHWKEGLPWVTL Trigger: AAGAGTCACCCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGGCTGGGTGAGGGGAGAGAATGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 90 bp | TTTCCCCGGTCTTTGGGTGGTGCTCTCCCGAAGATGCGCCTGACTTaGACCAGCACTCTCTGCTTCTCTCCGGCTCCTTTTGGAACCTCT | + |
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Preference number: 6 (lower is better) Translates to: FPRSLGGALPKMRLT*TSTLCFSPAPFGTS Trigger: AGAGGTTCCAAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAAAGTCAGGCGCATCTTCGGGAGAGCACCACCCAAAGACCGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | CCTTTGGGAATGTGGGTGCTCTTGACGCGGGTCCATTaGAAGGAAGGCCTTCCTTGGGTGACTCTTGGACCA | + |
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Preference number: 6 (lower is better) Translates to: PLGMWVLLTRVH*KEGLPWVTLGP Trigger: TGGTCCAAGAGTCACCCAAGGAAGGCCTTCCTTCCAATGGACCCGCGTCAAGAGCACCCACATTCCCAAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | AACTGTTCATCCCTGTCGTTGTCAAATCCAGAGAAGTaGATCCGGCCTCCCGGCAGCTTGGTGATGGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: NCSSLSLSNPEK*IRPPGSLVMVG Trigger: CCCCACCATCACCAAGCTGCCGGGAGGCCGGATCCACTTCTCTGGATTTGACAACGACAGGGATGAACAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS TCA 72 bp | ACGCTGCTGTTCCGAGTGGGTTCCAGGACCAGACCTTaGACTTTCACCCTGGTTAAGGTTCGGGTGCCATTC | + |
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Preference number: 6 (lower is better) Translates to: TLLFRVGSRTRP*TFTLVKVRVPF Trigger: GAATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGAACCCACTCGGAACAGCAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 72 bp | CTCCCGAAGATGCGCCTGACTTTGACCAGCACTCTCTaGTTCTCTCCGGCTCCTTTTGGAACCTCTGCGTTT | + |
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Preference number: 6 (lower is better) Translates to: LPKMRLTLTSTL*FSPAPFGTSAF Trigger: AAACGCAGAGGTTCCAAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAAAGTCAGGCGCATCTTCGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 72 bp | TCTTTGGGTGGTGCTCTCCCGAAGATGCGCCTGACTTaGACCAGCACTCTCTGCTTCTCTCCGGCTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: SLGGALPKMRLT*TSTLCFSPAPF Trigger: AAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAAAGTCAGGCGCATCTTCGGGAGAGCACCACCCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 90 bp | GCACTCTCTGCTTCTCTCCGGCTCCTTTTGGAACCTCTGCGTTTCTaGCGACCTCCTTTGTTTCTCATCTTCAGCACTCCCACCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: ALSASLRLLLEPLRF*RPPLFLIFSTPTLS Trigger: GCTGAGGGTGGGAGTGCTGAAGATGAGAAACAAAGGAGGTCGCAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGAAGCAGAGAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 72 bp | TTTGAGCCTCAGGTAGATCCCCGAGCCTGTGGAGCCTaGCTCAGCATCGCAATACTGATACAGGAGGTCATT | + |
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Preference number: 6 (lower is better) Translates to: FEPQVDPRACGA*LSIAILIQEVI Trigger: AATGACCTCCTGTATCAGTATTGCGATGCTGAGGCAGGCTCCACAGGCTCGGGGATCTACCTGAGGCTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 72 bp | CTGCAAAACCGATACACCAACTGTTCATCCCTGTCGTaGTCAAATCCAGAGAAGTGGATCCGGCCTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: LQNRYTNCSSLS*SNPEKWIRPPG Trigger: GCCGGGAGGCCGGATCCACTTCTCTGGATTTGACAACGACAGGGATGAACAGTTGGTGTATCGGTTTTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS TCA 72 bp | CACTCACAACCTGGGGTATTCTGCTCAAGTGCCACGTaGAGTCTAGTTCTGTTTCCGACCCATCAGAGAGGG | + |
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Preference number: 6 (lower is better) Translates to: HSQPGVFCSSAT*SLVLFPTHQRG Trigger: CCCTCTCTGATGGGTCGGAAACAGAACTAGACTTCACGTGGCACTTGAGCAGAATACCCCAGGTTGTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 72 bp | TCTAAGATGCTGAACCTGCTGTCCGTACCATACACCTaGCTCCTTCTCCTAGGGTGTGCTCCTTTTACGCTG | + |
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Preference number: 6 (lower is better) Translates to: SKMLNLLSVPYT*LLLLGCAPFTL Trigger: CAGCGTAAAAGGAGCACACCCTAGGAGAAGGAGGCAGGTGTATGGTACGGACAGCAGGTTCAGCATCTTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | GAGTGGGTTCCAGGACCAGACCTTGAACTTTCACCCTaGTTAAGGTTCGGGTGCCATTCTCGAAGATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: EWVPGPDLELSP*LRFGCHSRRWS Trigger: AGACCATCTTCGAGAATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAGGTCTGGTCCTGGAACCCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | GGGCTGGCAAGATGGATAGTGTTCTCACTCACAACCTaGGGTATTCTGCTCAAGTGCCACGTGAAGTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: GLARWIVFSLTT*GILLKCHVKSS Trigger: ACTAGACTTCACGTGGCACTTGAGCAGAATACCCCAGGTTGTGAGTGAGAACACTATCCATCTTGCCAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | TTTGACCAGCACTCTCTGCTTCTCTCCGGCTCCTTTTaGAACCTCTGCGTTTCTTGCGACCTCCTTTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FDQHSLLLSGSF*NLCVSCDLLCF Trigger: GAAACAAAGGAGGTCGCAAGAAACGCAGAGGTTCCAAAAGGAGCCGGAGAGAAGCAGAGAGTGCTGGTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS TCA 72 bp | AAGGGAAATTGGTCGCGAACCTTTTGTCTAAGATGCTaGACCTGCTGTCCGTACCATACACCTGCCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: KGNWSRTFCLRC*TCCPYHTPASF Trigger: GAAGGAGGCAGGTGTATGGTACGGACAGCAGGTTCAGCATCTTAGACAAAAGGTTCGCGACCAATTTCCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 72 bp | CCAGACCTTGAACTTTCACCCTGGTTAAGGTTCGGGTaGCATTCTCGAAGATGGTCTCATAGGATAGGGACT | + |
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Preference number: 6 (lower is better) Translates to: PDLELSPWLRFG*HSRRWSHRIGT Trigger: AGTCCCTATCCTATGAGACCATCTTCGAGAATGGCACCCGAACCTTAACCAGGGTGAAAGTTCAAGGTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 72 bp | CTCCTTTTGGAACCTCTGCGTTTCTTGCGACCTCCTTaGTTTCTCATCTTCAGCACTCCCACCCTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: LLLEPLRFLRPP*FLIFSTPTLSF Trigger: AAAGCTGAGGGTGGGAGTGCTGAAGATGAGAAACAAAGGAGGTCGCAAGAAACGCAGAGGTTCCAAAAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CCA 72 bp | CTGCCTCAGCATCGCAATACTGATACAGGAGGTCATTaGATTCCTCAGAAACGCTGCAAAACCGATACACCA | + |
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Preference number: 6 (lower is better) Translates to: LPQHRNTDTGGH*IPQKRCKTDTP Trigger: TGGTGTATCGGTTTTGCAGCGTTTCTGAGGAATCCAATGACCTCCTGTATCAGTATTGCGATGCTGAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS GCA 72 bp | ACTGATACAGGAGGTCATTGGATTCCTCAGAAACGCTaGAAAACCGATACACCAACTGTTCATCCCTGTCGT | + |
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Preference number: 6 (lower is better) Translates to: TDTGGHWIPQKR*KTDTPTVHPCR Trigger: ACGACAGGGATGAACAGTTGGTGTATCGGTTTTGCAGCGTTTCTGAGGAATCCAATGACCTCCTGTATCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 72 bp | CCGGTGGATAGCTTCACTGCTGTATTAAAAGGGAAATaGGTCGCGAACCTTTTGTCTAAGATGCTGAACCTG | + |
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Preference number: 6 (lower is better) Translates to: PVDSFTAVLKGK*VANLLSKMLNL Trigger: CAGGTTCAGCATCTTAGACAAAAGGTTCGCGACCAATTTCCCTTTTAATACAGCAGTGAAGCTATCCACCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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| CDS CAA 72 bp | ACTGCTGTATTAAAAGGGAAATTGGTCGCGAACCTTTaGTCTAAGATGCTGAACCTGCTGTCCGTACCATAC | + |
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Preference number: 6 (lower is better) Translates to: TAVLKGKLVANL*SKMLNLLSVPY Trigger: GTATGGTACGGACAGCAGGTTCAGCATCTTAGACAAAAGGTTCGCGACCAATTTCCCTTTTAATACAGCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036426.13 ENSMUST00000179574.2 |
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